mRNA_P-wetherbeei_contig1189.5.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1189.5.1 vs. uniprot
Match: A0A6H5L4J3_9PHAE (RED_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4J3_9PHAE) HSP 1 Score: 181 bits (460), Expect = 1.580e-46 Identity = 164/447 (36.69%), Postives = 220/447 (49.22%), Query Frame = 1 Query: 289 KKIWRRGKLVELEA-KDGAAFRDRAEERRKGVNPDYDDEVARIVEVDAEKSKYLGGDMKHTHLVRGLDYALLVKMREENRQQRAEQQRDAATAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPVRTLAAKALYGVWQQLQSARESKVHGRVQDFSRVAYEFDMDPDSSVDIPVQIRRGRGDADDGEE------KRH-NYMMDDQLLQRLGRGLESFRQHG-KARRHRKRKAVSAPXXXXXXXVASTMATPVHSAMD----DDDNLAVAVGMAPQRRKLADDVDIFAGIGGTSSAAPSLQPAPLPLPTAPAAIPDYFINLRAAAGKRTAEKEAAATAAAVPSKEDIARSIRAAAXXXTARITGSDPXXXXXAVANADAMRSG--VVERDIFARAPVRGDAVAGHGGGGYDFYPENADYETYDSDEDA 1584 K WRRGKL+ D +RDRA+ERRKG NPDY D++ ++ +DAE +KYLGGD++HTHLV+GLDYALLVK+REE RQQ+ E + RTL K + V ++L ++ G DF RV YEF++DP+S+ +IP + GD DGEE +RH NY+M++ LL+R+ FRQHG KARR RKR A XXXXXXX D D ++ AV +R K++ ++IF + S A P A A YF LRA K + + A +P++ +++ +++AAA AR++G D A A G +ERDIFA P RG A+ G GGYD YPE D+ETYDSDEDA Sbjct: 87 KGTWRRGKLIVASGVNDPNKYRDRADERRKGQNPDYADKLNQMASMDAETTKYLGGDVEHTHLVKGLDYALLVKIREEERQQQIE-------------------------------------VLEGDGGDDRSGDRRGGRAEVRARTLMGKTVLAVLRKLSLSQG----GGGPDFRRVGYEFELDPESTQEIPTAVAHSLGD--DGEEXXXXXRERHTNYLMEEDLLERVESAFTLFRQHGGKARRQRKRARDKAGXXXXXXXXXXXXXXXXXXXXDGGAGDMEDRDAAVLPPARRAKVS--INIFEDVDDRYVPPGSAGSASQPPVGAAGAAKGYFSGLRA---KNAGDSDNKADV--LPTRAEMSATVKAAARAAAARVSG-DKKTSSEAGARETGKSGGRDKIERDIFAARPSRGQAL-GVSAGGYDVYPETGDFETYDSDEDA 481
BLAST of mRNA_P-wetherbeei_contig1189.5.1 vs. uniprot
Match: D7FT17_ECTSI (RED_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT17_ECTSI) HSP 1 Score: 147 bits (371), Expect = 3.830e-35 Identity = 143/404 (35.40%), Postives = 189/404 (46.78%), Query Frame = 1 Query: 421 VDAEKSKYLGGDMKHTHLVRGLDYALLVKMREENRQQRAEQQRDAATAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPVRTLAAKALYGVWQQLQSARESKVHGRVQDFSRVAYEFDMDPDSSVDIPVQIRRGRGDADDGEE-------KRH-NYMMDDQLLQRLGRGLESFRQHG-KARRHRKRK-----AVSAPXXXXXXXVASTMATPVHSAMDDDDNLAVAVGMAPQRRKLADDVDIFAGIGGTSSAAPSLQPAPLPLPTAPAAIPDYFINLRAAAGKRTAEKEAAATAAAVPSKEDIARSIRAAAXXXTARITGSDPXXXXXAVANADAMRSG--VVERDIFARAPVRGDAVAGHGGGGYDFYPENADYETYDSDEDA 1584 +DAE +KYLGGD++HTHLV+GLDYALLVK+REE RQQ+ E + RTL K + V ++L + G DF RV YEF++DP+S+ +IP + GD DGEE +RH NY+M++ LL+R+ FRQHG KARR RKR V XXXXXXX A D +D A + P R+ ++IF I S A P A A YF LRA +A+ +A +P++ +++ +++AAA AR++G D A A G +ERDIFA P RG A+ G GGYD YPE D+ETYDSDEDA Sbjct: 1 MDAETTKYLGGDVEHTHLVKGLDYALLVKIREEERQQQIE-------------------------------------ILEGDGGDDRNGDRRGGRAEVRARTLMGKTVLAVLRKLSLGQG----GGGPDFRRVGYEFELDPESTQEIPTAVAHSLGD--DGEEXXXXXXRERHTNYLMEEDLLERVESAFTLFRQHGGKARRQRKRARDKAGGVGXXXXXXXXXXXXXXXXXXGGAGDTEDRDAAVL---PPARRAKVSINIFEDIDDRYVPPGSAGSASQPPVGAAGAAKGYFSGLRAKNAGDSADNKADV----LPTRAEMSATVKAAARAAAARVSG-DKKASSGAGARETGKSGGRDKIERDIFAARPSRGQAL-GVSAGGYDVYPETGDFETYDSDEDA 352
BLAST of mRNA_P-wetherbeei_contig1189.5.1 vs. uniprot
Match: A0A7S3XKR5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XKR5_HETAK) HSP 1 Score: 112 bits (279), Expect = 3.270e-23 Identity = 92/235 (39.15%), Postives = 132/235 (56.17%), Query Frame = 1 Query: 325 EAKDGAAFRDRAEERRKGVNPDYDDEVARIVEVDAEKSKYLGGDMKHTHLVRGLDYALLVKMREENRQQRAEQQRDAATAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPVRTLAAKALYGVWQQLQSARESKVHGRVQDFSRVAYEFDMDPDSSVDIPVQIRRGRGDADDGEEKRHNYMMDDQLLQRLGRGLESFRQHGKARRHRKRKAVSAP 1029 E ++ +RDRA ERR+G NPDYDD++ ++V++D EKSKYLGGD+KHTHLVRGLDYALL K+R+E +Q+ +Q A XXXXXXXXXXXXXXXXX V + + G QL A+ S + VQ F ++++EFD+DP S+ ++P + + + DA+ ++ +DD L Q + + RQ KA + R++K P Sbjct: 107 EIEENQGYRDRAAERRQGYNPDYDDDIEKMVQMDVEKSKYLGGDVKHTHLVRGLDYALLNKVRQETLEQQQQQLEATLEA----------------------QKKSKVQGXXXXXXXXXXXXXXXXXLAAAVARMRTRTPLGRGVQLYFAQRS-LRAPVQ-FGQLSFEFDLDPASAQEVPTTVSKAKADAEAEDDTLETAALDDALAQAVEQAFVGIRQGLKAGKRRRKKGRGQP 317
BLAST of mRNA_P-wetherbeei_contig1189.5.1 vs. uniprot
Match: A0A4D9CVF8_9STRA (RED_N domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVF8_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 3.120e-17 Identity = 44/62 (70.97%), Postives = 55/62 (88.71%), Query Frame = 1 Query: 328 AKDGAAFRDRAEERRKGVNPDYDDEVARIVEVDAEKSKYLGGDMKHTHLVRGLDYALLVKMR 513 A + +RDRAEERRKGVNPDY+DE+AR+V +DAE +KYLGGD+KHTHLV+GLDYALL ++R Sbjct: 144 ASEEGGYRDRAEERRKGVNPDYEDEIARLVHMDAETTKYLGGDVKHTHLVKGLDYALLQRVR 205
BLAST of mRNA_P-wetherbeei_contig1189.5.1 vs. uniprot
Match: A0A7S2W4J1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W4J1_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 1.640e-14 Identity = 40/58 (68.97%), Postives = 51/58 (87.93%), Query Frame = 1 Query: 346 FRDRAEERRKGVNPDYDDEVARIVEVDAEKSKYLGGDMKHTHLVRGLDYALLVKMREE 519 +RDRA ERRK +NPDY +V +++EVD EKSKYLGGD++HTHLV+GLDYALL K+R+E Sbjct: 72 YRDRANERRKEINPDYKTDVQKLLEVDIEKSKYLGGDVEHTHLVKGLDYALLSKVRDE 129
BLAST of mRNA_P-wetherbeei_contig1189.5.1 vs. uniprot
Match: A0A812YWK0_SYMMI (SMU2 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812YWK0_SYMMI) HSP 1 Score: 77.8 bits (190), Expect = 9.200e-12 Identity = 36/67 (53.73%), Postives = 49/67 (73.13%), Query Frame = 1 Query: 346 FRDRAEERRKGVNPDYDDEVARIVEVDAEKSKYLGGDMKHTHLVRGLDYALLVKMREENRQQRAEQQ 546 +RDRA+ERR NPDYD ++ + +D E++KYLGGD +HTHLV+GLDYALL K+R + + A Q Sbjct: 73 YRDRAQERRNDANPDYDAQLEAVANLDVEQTKYLGGDEEHTHLVKGLDYALLRKVRNQTEKNEARDQ 139
BLAST of mRNA_P-wetherbeei_contig1189.5.1 vs. uniprot
Match: A0A5J4XX10_9CHLO (Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XX10_9CHLO) HSP 1 Score: 78.6 bits (192), Expect = 1.300e-11 Identity = 46/106 (43.40%), Postives = 67/106 (63.21%), Query Frame = 1 Query: 262 KKEPAAPAVKKIWRRGKLVELEAKDGAAFRDRAEERRKGVNPDYDDEVARIVEVDA--------EKSKYLGGDMKHTHLVRGLDYALLVKMREENRQQRAEQQRDA 555 KK+P P + K + EA +G +RDRAEERRKG+NPDY+ + DA E++KYLGGD++HTHLV+GLDYALL K++ E ++ ++ +D+ Sbjct: 48 KKKPPRP-------KPKAEKEEADEGPLYRDRAEERRKGLNPDYERTALSGLPTDAPLNPTMSVEETKYLGGDLQHTHLVKGLDYALLQKVKVEQTGKQLQEMQDS 146
BLAST of mRNA_P-wetherbeei_contig1189.5.1 vs. uniprot
Match: A0A7S0X157_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0X157_9CHLO) HSP 1 Score: 73.6 bits (179), Expect = 1.190e-10 Identity = 46/92 (50.00%), Postives = 59/92 (64.13%), Query Frame = 1 Query: 271 PAAPAVKKIWRRGKLVELEAKD-GAAFRDRAEERRKGVNPDYD--DEVARIV--------EVDAEKSKYLGGDMKHTHLVRGLDYALLVKMR 513 P PA K + G + E +D G +RDRAEERR+GVN DY +E+ ++ ++ E SKYLGGD++HTHLVRGLDYALL KMR Sbjct: 51 PKKPAYKPKPKPGAAKDDEEEDDGPKYRDRAEERRRGVNLDYTKANELLGVIGSNDVDPTKLSVEDSKYLGGDLEHTHLVRGLDYALLQKMR 142
BLAST of mRNA_P-wetherbeei_contig1189.5.1 vs. uniprot
Match: A0A7R9Z3L9_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9Z3L9_9CHLO) HSP 1 Score: 69.7 bits (169), Expect = 2.320e-10 Identity = 38/72 (52.78%), Postives = 51/72 (70.83%), Query Frame = 1 Query: 325 EAKDGAAFRDRAEERRKGVNPDYD--DEVARIVEVDA-------EKSKYLGGDMKHTHLVRGLDYALLVKMR 513 E DG +RDRAEERR+G+NPDY +++A + D E++KYLGGD++HTHLV+GLD+ALL K R Sbjct: 66 EEDDGPKYRDRAEERRRGINPDYASANQLAAALPGDVDMNALSVEETKYLGGDIEHTHLVKGLDFALLQKER 137
BLAST of mRNA_P-wetherbeei_contig1189.5.1 vs. uniprot
Match: A0A0L0HLB9_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HLB9_SPIPD) HSP 1 Score: 74.3 bits (181), Expect = 2.710e-10 Identity = 44/107 (41.12%), Postives = 65/107 (60.75%), Query Frame = 1 Query: 289 KKIWRR-GKLVELEAKDGAAFRDRAEERRKGVNPDYDDEVARIVEVDA------------------EKSKYLGGDMKHTHLVRGLDYALLVKMREENRQQRAEQQRD 552 KK+W+ K ++ +G +RDRA ERR+G NPDY++ + + A E+SKYLGGD KHTHLV+GLDYALL K++ E +Q+ AE++++ Sbjct: 54 KKLWKPPSKEGASQSDNGPGYRDRARERREGANPDYEETEQMLAVLKASEQSQNADRTETDTSLSIEQSKYLGGDAKHTHLVKGLDYALLEKVQRELQQKDAEEKKE 160 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1189.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1189.5.1 >prot_P-wetherbeei_contig1189.5.1 ID=prot_P-wetherbeei_contig1189.5.1|Name=mRNA_P-wetherbeei_contig1189.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=541bp MADDNGIDRLKGRDADEIATLKKLILDEKSRKKSQQTPAPRRRGVGGGDSback to top mRNA from alignment at P-wetherbeei_contig1189:5825..7541- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1189.5.1 ID=mRNA_P-wetherbeei_contig1189.5.1|Name=mRNA_P-wetherbeei_contig1189.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1717bp|location=Sequence derived from alignment at P-wetherbeei_contig1189:5825..7541- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1189:5825..7541- >mRNA_P-wetherbeei_contig1189.5.1 ID=mRNA_P-wetherbeei_contig1189.5.1|Name=mRNA_P-wetherbeei_contig1189.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1623bp|location=Sequence derived from alignment at P-wetherbeei_contig1189:5825..7541- (Phaeothamnion wetherbeei SAG_119_79)back to top |