mRNA_P-wetherbeei_contig11889.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig11889.1.1
Unique NamemRNA_P-wetherbeei_contig11889.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig11889.1.1 vs. uniprot
Match: A0A836CDU6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDU6_9STRA)

HSP 1 Score: 254 bits (648), Expect = 5.220e-80
Identity = 146/274 (53.28%), Postives = 174/274 (63.50%), Query Frame = 1
Query:   37 MPYRWAEPLPPFRSCLSELTEAE----PAASGL--PELVLRGALSGDEVAEQSWLTSAFIDIVMRKFARTYSSTTFMPIEFAAYSL-RDGSTREDMAAARDILGRPVDYAEGKPFV-LPFIQNNHWQLLRVQLDPVPELQLFEPMGKPAKRGGGGG---GISARYIPKQVFRWLNAMYPLGEDGVAAADGWPYAASTSXXXXXXXXXXXXXWMRRSFSAVTRQQQQTGFDCGVASLLYAEKCGQGQLREDIDEYTTQGDLTLYRRLLRDYSESL 825
            MPYRWAEPLPPF +CL++         P++ GL   + VLRGAL GD V ++SWLTS+FID+V+ +FA  Y    FMPIEFAA+ L R G  R DMAA  DILG+ +DYA  KP + L  ++N HW LLRVQ  PVPELQLFEP+GKPAKR  G     G+S RYIPK VF WL+ M   G                              W  RS SA+TRQQQ TGFDCGVASLLYAEKCGQ Q+REDID  TTQ D+T YR++L+ +  SL
Sbjct:    1 MPYRWAEPLPPFVTCLNQPAPLRLLRSPSSGGLVATDGVLRGALYGDSVDDESWLTSSFIDMVLAQFAACYRGAHFMPIEFAAFRLARMG--RADMAACTDILGQTIDYAARKPIIFLANVKNLHWNLLRVQHFPVPELQLFEPLGKPAKRAHGAHSSEGVSYRYIPKDVFVWLDTMCARG----------------------------GGWATRSVSAITRQQQTTGFDCGVASLLYAEKCGQDQMREDIDAATTQDDITAYRQVLQKFLRSL 244          
BLAST of mRNA_P-wetherbeei_contig11889.1.1 vs. uniprot
Match: A0A7S2SPQ6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SPQ6_9STRA)

HSP 1 Score: 231 bits (589), Expect = 3.730e-71
Identity = 131/273 (47.99%), Postives = 167/273 (61.17%), Query Frame = 1
Query:    7 VVFLKLPRCKMPYRWAEPLPPFRSCLSEL--TEAEPAASGLPEL---VLRGALSGDEVAEQSWLTSAFIDIVMRKFARTYSSTTFMPIEFAAYSLRDGSTREDMAAARDILGRPVDYAEGKPFV-LPFIQNNHWQLLRVQLDPVPELQLFEPMGKPAKRGGGGGGISARYIPKQVFRWLNAMYPLGEDGVAAADGWPYAASTSXXXXXXXXXXXXXWMRRSFSAVTRQQQQTGFDCGVASLLYAEKCGQGQLREDIDEYTTQGDLTLYRRLLR 807
            VV ++L RCKMPYRW EPLPPF S L+ +     +  A  L      VLR ALS DEV ++SWL+S+FID+V+ ++AR Y +  FMP+EFAA+ L+   T  DM  A DILG+ +DY   KP V L  I N HW L RVQ  P+ ELQLFEPMGKPA R G    +S RYIPK +  WL+ ++PLG +  +                         W+ RS SA+T Q Q TGFDCGVA +LYAEKC QG ++EDID+ T Q D T +R+ L+
Sbjct:   70 VVTVRLARCKMPYRWREPLPPFVSILNHVGALHLDSDARRLDHATVTVLRRALSSDEVQDESWLSSSFIDLVLSRYARRYPNVHFMPVEFAAFRLKTMQT-VDMFQATDILGQRIDYNMRKPVVFLANIANMHWNLFRVQHWPLKELQLFEPMGKPATRHG----VSLRYIPKHIIHWLDTVWPLGSEAES-------------------------WLFRSCSAITTQHQLTGFDCGVACILYAEKCAQGLMKEDIDDSTKQSDFTQFRQDLQ 312          
BLAST of mRNA_P-wetherbeei_contig11889.1.1 vs. uniprot
Match: A0A6H5K1M2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1M2_9PHAE)

HSP 1 Score: 236 bits (603), Expect = 6.380e-70
Identity = 142/341 (41.64%), Postives = 180/341 (52.79%), Query Frame = 1
Query:    4 NVVFLKLPRCKMPYRWAEPLPPFRSCLSELTEAEPA---ASGLPELV--------LRGALSGDEVAEQSWLTSAFIDIVMRKFARTYSSTTFMPIEFAAYSLRD---GSTREDMAAA----------------------------------RDILGRPVDYAEGKPFV-LPFIQNNHWQLLRVQLDPVPELQLFEPMGKPAKRGG------------------GGGGISARYIPKQVFRWLNAMYPLGEDGVAAADGWPYAASTSXXXXXXXXXXXXXWMRRSFSAVTRQQQQTGFDCGVASLLYAEKCGQGQLREDIDEYTTQGDLTLYRRLLRDYSESL 825
            NVV +KL R +MP RWA P PPF++CL ++  A+     A G             + G   GD V  ++WL+S FID+VM KFARTY++  FMPI+FA   L       T    AAA                                  +D+LGRP+ Y+E +P + L  + N HW LLRV+ DPVPELQLFEPMGKP +R G                  GG     R IPK+V+RWL+A++PL   G          +  S             W  R++SA+TRQQQ TGFDCGVASLLYAEKCGQGQ+REDID +TTQ D+T YRR L+ Y E +
Sbjct:  251 NVVTVKLARSQMPSRWAAPPPPFKTCLRDVRPADKLGGRACGXXXXXXXXXXXXSMLGLGEGDVVDAKNWLSSGFIDVVMAKFARTYTNVHFMPIDFAVLCLNGWGASDTPPPAAAASGGDAMGSEXXXXXXXXXAATAANADLADQSMVFKDVLGRPIVYSEKRPVIFLTHVNNVHWNLLRVEHDPVPELQLFEPMGKPPRRQGXXXXXXXXXXXXXXXXAPGGRSTGFRCIPKEVYRWLDAVWPLRSGGEIRGGSCSSGSGGSKRKAPSPTPSHEGWASRAYSAITRQQQTTGFDCGVASLLYAEKCGQGQMREDIDAWTTQADMTEYRRALQRYVEEV 591          
BLAST of mRNA_P-wetherbeei_contig11889.1.1 vs. uniprot
Match: D8LIB2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIB2_ECTSI)

HSP 1 Score: 228 bits (581), Expect = 1.120e-66
Identity = 138/362 (38.12%), Postives = 179/362 (49.45%), Query Frame = 1
Query:    4 NVVFLKLPRCKMPYRWAEPLPPFRSCLSELTEAEPA---ASG-------------LPELVLRGALSGDEVAEQSWLTSAFIDIVMRKFARTYSSTTFMPIEFAAYSLR-----------------------------------------------------DGSTREDMAAARDILGRPVDYAEGKPFV-LPFIQNNHWQLLRVQLDPVPELQLFEPMGKPAKRGG------------------GGGGISARYIPKQVFRWLNAMYPLGEDGVAAADGWPYAASTSXXXXXXXXXXXXXWMRRSFSAVTRQQQQTGFDCGVASLLYAEKCGQGQLREDIDEYTTQGDLTLYRRLLRDYSESL 825
            NVV +KL R +MP RWA P PPF +CL ++  A+     ASG                  + G   GD V  ++WL+S FID+VM KFARTY++  FMPI+FA   L                                                      + +  +     +D+LGRP+ Y+E +P + L  + N HW LLRV+ DPVPELQLFEPMGKP +R G                  GG     R IPK+V+RWL+A++PL   G          +  S             W  R++SA+TRQQQ TGFDCGVASLLYAEKCGQGQ+RED+D +TTQ D+T YRR L+ Y E +
Sbjct:  233 NVVTVKLARSQMPSRWAAPPPPFETCLRDVRPADKLGGRASGGRACGXXXXXXXXXXXXSMLGLGEGDVVDAKNWLSSGFIDVVMAKFARTYTNVHFMPIDFAVLCLNGWGAPDTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAANAALADQSMVFKDVLGRPIVYSEKRPVIFLTHVNNVHWNLLRVEHDPVPELQLFEPMGKPPRRQGXXXXXXXXXXXXXXXXAPGGRSTGFRCIPKEVYRWLDAVWPLRSGGEIRGGSCSSGSGGSKRKAPSPTPSHEGWASRAYSAITRQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQADMTEYRRALQRYVEEV 594          
BLAST of mRNA_P-wetherbeei_contig11889.1.1 vs. uniprot
Match: A0A7S2GCQ8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GCQ8_9STRA)

HSP 1 Score: 220 bits (561), Expect = 1.170e-66
Identity = 125/282 (44.33%), Postives = 169/282 (59.93%), Query Frame = 1
Query:    7 VVFLKLPRCKMPYRWAEPLPPFRSCLSEL------TEA--EPAASGLPELVLRGALSGDEVAEQSWLTSAFIDIVMRKFARTYSSTTFMPIEFAAYSLRDGSTREDMAAARDILGRPVDYAEGKPFVL-PFIQNNHWQLLRVQLDPVPELQLFEPMGKPAKRGGGGGGISARYIPKQVFRWLNAMYPLGEDGVAAADGWPYAASTSXXXXXXXXXXXXXWMRRSFSAVTRQQQQTGFDCGVASLLYAEKCGQGQLREDIDEYTTQGDLTLYRRLLRDYSESL 825
            VV ++L RCKMPYRW EPLPPF S LSE       +EA  +  A+ + E VL  +++GDEV ++SWL+S+FID+V+ +FA+TY S  FMPIEF+ + L+    + DM  A D++G+ +DY   KP +    I N HW +LRVQ  P+ ELQLFEPMGKPA R G    +S R IP+ +  WL+  +PL E     + G                     W+ ++ SA+T Q Q   FDCGVA LLYAEKC QG ++EDI   T Q D+T +R+ L+    SL
Sbjct:   73 VVTVRLARCKMPYRWREPLPPFVSILSETELFDQWSEAPDDTGAACISESVLHRSMNGDEVKDESWLSSSFIDLVLSRFAKTYRSMHFMPIEFSEFRLKT-MQKSDMLQATDLVGKKIDYNIPKPVIFFANIANMHWNVLRVQHWPLKELQLFEPMGKPASRNG----VSYRNIPQHIIHWLDTCWPLDEGHPKDSGG-------------------RSWIVQACSAITTQHQVNSFDCGVACLLYAEKCAQGMMKEDIHATTNQRDITEFRQCLQRCLRSL 330          
BLAST of mRNA_P-wetherbeei_contig11889.1.1 vs. uniprot
Match: A0A5D6Y3L5_9STRA (ULP_PROTEASE domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y3L5_9STRA)

HSP 1 Score: 151 bits (382), Expect = 7.350e-41
Identity = 89/245 (36.33%), Postives = 121/245 (49.39%), Query Frame = 1
Query:  133 VLRGALSG--DEVAEQSWLTSAFIDIVMRKFARTYSSTTFMPIEFAAYSLRDGSTREDMAA-----------ARDILGRPVDYAEGKPFVLPFIQNN-HWQLLRVQLDPVPELQLFEPMGKPAKRGGGGGGISARYIPKQVFRWLNAMYPLGEDGVAAADGWPYAASTSXXXXXXXXXXXXXWMRRSFSAVTRQQQQTGFDCGVASLLYAEKCGQGQLREDIDEYTTQGDLTLYRRLLRDYSESL 825
            +L+ A S   D + + SWLTS  +D+++ + A  Y    F+P +F    L   S                   RD+LGR VDY   +P +        HW L RVQL P PELQLFEPMG+P+ R G    +S RY+P+ V  WL A YP                                W+ R+ SA+T  QQ +GFDCGVA LLYA+KCGQGQ R++ID  T Q  +T +R  L+   +++
Sbjct:   46 LLQSAFSSEDDSIDDTSWLTSTLMDLMLWRLAGQYPGVHFLPTDFFHCVLEGRSRSRSQHGRKRGPSDCDFRVRDVLGRLVDYGSNRPLLFAVNCGRIHWNLFRVQLTPQPELQLFEPMGRPSSRSG----LSHRYVPRSVVEWLEACYP----------------------------QHPSWISRAVSAITAPQQVSGFDCGVACLLYADKCGQGQTRQEIDARTDQLAITGFRATLQQQLQAM 258          
BLAST of mRNA_P-wetherbeei_contig11889.1.1 vs. uniprot
Match: A0A484E1F7_BRELC (ULP_PROTEASE domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E1F7_BRELC)

HSP 1 Score: 150 bits (379), Expect = 3.940e-40
Identity = 90/243 (37.04%), Postives = 126/243 (51.85%), Query Frame = 1
Query:  133 VLRGALSGDE-VAEQSWLTSAFIDIVMRKFARTYSSTTFMPIEFAAYSL----------------RDGSTREDMAAARDILGRPVDYAEGKPFVLPF-IQNNHWQLLRVQLDPVPELQLFEPMGKPAKRGGGGGGISARYIPKQVFRWLNAMYPLGEDGVAAADGWPYAASTSXXXXXXXXXXXXXWMRRSFSAVTRQQQQTGFDCGVASLLYAEKCGQGQLREDIDEYTTQGDLTLYRRLLR 807
            +L+ A+  ++ V E +W+T   ID+V+ KFA++Y++  F+P  F    L                R   ++ D    RD+LGR VDY   KP V    +   HW L RVQL P P+LQLFEPMGK A R G    IS R +P+ V  WLN  YP  +                             W++R+ SA+  +QQ +GFDCGVA LLYA+KCG+GQ  E+I++   Q  +T +R+ LR
Sbjct:   87 LLQSAIGPEDCVDESNWITGTLIDLVLWKFAKSYAAVYFLPTAFYHLHLEMAQEIAVRPSWPQRSRGLRSKRDFIV-RDVLGRVVDYNSKKPVVFVVNVDQIHWNLFRVQLSPKPKLQLFEPMGKLASRSG----ISYRSVPRAVIEWLNVCYPQHK----------------------------CWLQRTMSAIENKQQVSGFDCGVACLLYADKCGRGQSGEEINDSIDQNAITSFRKQLR 296          
BLAST of mRNA_P-wetherbeei_contig11889.1.1 vs. uniprot
Match: K3WTS6_GLOUD (ULP_PROTEASE domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WTS6_GLOUD)

HSP 1 Score: 148 bits (374), Expect = 1.080e-39
Identity = 91/254 (35.83%), Postives = 125/254 (49.21%), Query Frame = 1
Query:  133 VLRGALSG--DEVAEQSWLTSAFIDIVMRKFARTYSSTTFMPIEF--------------------AAYSLRDGSTREDMAAARDILGRPVDYAEGKPFVLPF-IQNNHWQLLRVQLDPVPELQLFEPMGKPAKRGGGGGGISARYIPKQVFRWLNAMYPLGEDGVAAADGWPYAASTSXXXXXXXXXXXXXWMRRSFSAVTRQQQQTGFDCGVASLLYAEKCGQGQLREDIDEYTTQGDLTLYRRLLRDYSESL 825
            +L+ A S   D++ E SWLTS  +D+++ + A  Y +  F+P +F                    A Y +   +   D    RD+LGR VDY   +P +    I   HW L RVQL P PELQLFEPMG+ A R G    IS R IP+ V  WL   YP  ++                            W+ ++ SA+T+ QQ +GFDCGVA LLYA+KCGQGQ  + I+E T Q  +T +R  L+    S+
Sbjct:   37 LLQSAFSSEDDKIDETSWLTSTLMDLILWRLANLYPNVHFLPTDFFHCHLEGVSRNYHHHYPRHHAPYMVNRANEESDFHV-RDVLGRAVDYKSNQPILFAVNIGLIHWNLFRVQLTPHPELQLFEPMGRLASRTG----ISYRSIPRSVIEWLETCYPQHKN----------------------------WISKAVSAITKPQQVSGFDCGVACLLYADKCGQGQTHQQINERTDQHAITSFRHTLQSQLRSM 257          
BLAST of mRNA_P-wetherbeei_contig11889.1.1 vs. uniprot
Match: H3GTS9_PHYRM (ULP_PROTEASE domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GTS9_PHYRM)

HSP 1 Score: 148 bits (373), Expect = 3.430e-39
Identity = 88/238 (36.97%), Postives = 125/238 (52.52%), Query Frame = 1
Query:  130 LVLRGALSGDEVAEQS-WLTSAFIDIVMRKFARTYSSTTFMPIEF----------AAYSLRDGSTREDMAAARDILGRPVDYAEGKPFV-LPFIQNNHWQLLRVQLDPVPELQLFEPMGKPAKRGGGGGGISARYIPKQVFRWLNAMYPLGEDGVAAADGWPYAASTSXXXXXXXXXXXXXWMRRSFSAVTRQQQQTGFDCGVASLLYAEKCGQGQLREDIDEYTTQGDLTLYRRLLR 807
            L+L+ A   +++ ++S W+TS  ID+++ KFA  Y +  F+P  F          AA+  R  S R+     RD+LGR +DY +    V +  +   HW L RVQL P P LQLFEPMG+ A R G    IS R +P+ V  WL+  YP                                WM R+ SA+T +QQ +GFDCGVA LLYA+KCG+GQ  E+I++   Q  +T +R+ L+
Sbjct:   97 LLLQSAFGPEDLVDESNWITSTLIDLMLWKFANLYPAVHFLPTAFYHFHLEAAVQAAWHRRRRSKRDYQV--RDVLGRVMDYDDNASLVFIVNVDRIHWNLFRVQLAPTPRLQLFEPMGRLASRSG----ISYRSVPRAVIEWLDVCYP----------------------------QYKGWMERTVSAITNKQQVSGFDCGVACLLYADKCGRGQSGEEINDQIDQQAITSFRKQLQ 300          
BLAST of mRNA_P-wetherbeei_contig11889.1.1 vs. uniprot
Match: A0A329RWA6_9STRA (ULP_PROTEASE domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RWA6_9STRA)

HSP 1 Score: 148 bits (373), Expect = 3.780e-39
Identity = 91/235 (38.72%), Postives = 118/235 (50.21%), Query Frame = 1
Query:  157 DEVAEQSWLTSAFIDIVMRKFARTYSSTTFMPIEFAAYSL---------------RDGSTREDMAAARDILGRPVDYAEGKPFVLPFIQNN---HWQLLRVQLDPVPELQLFEPMGKPAKRGGGGGGISARYIPKQVFRWLNAMYPLGEDGVAAADGWPYAASTSXXXXXXXXXXXXXWMRRSFSAVTRQQQQTGFDCGVASLLYAEKCGQGQLREDIDEYTTQGDLTLYRRLLR 807
            D V E SW+T  FID+++ KFA  Y +  FMP  F  + L               R   T+ D    RD+LGR VDY    P V  FI N    HW L RVQL P P+LQLFEPMG+ A R G    IS R +P+ V  WL+  YP                                W+ R+ SA+T +QQ +GFDCGVA LLYA+KCG+G   E+I++   Q  +T +R+ L+
Sbjct:  105 DRVDESSWITGTFIDLMLWKFASLYPAVHFMPTAFYHFHLEAAVKAAGSPWRRRCRSHRTKRDYQV-RDVLGRVVDYDRDTPLV--FIVNVGQIHWNLFRVQLSPTPKLQLFEPMGRLASRSG----ISYRSVPRAVIEWLDVCYP----------------------------QYKCWLERTVSAITDKQQISGFDCGVACLLYADKCGRGLSGEEINDEIDQQAITSFRKQLQ 304          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11889.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CDU6_9STRA5.220e-8053.28Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2SPQ6_9STRA3.730e-7147.99Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A6H5K1M2_9PHAE6.380e-7041.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIB2_ECTSI1.120e-6638.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2GCQ8_9STRA1.170e-6644.33Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A5D6Y3L5_9STRA7.350e-4136.33ULP_PROTEASE domain-containing protein n=1 Tax=Pyt... [more]
A0A484E1F7_BRELC3.940e-4037.04ULP_PROTEASE domain-containing protein n=1 Tax=Bre... [more]
K3WTS6_GLOUD1.080e-3935.83ULP_PROTEASE domain-containing protein n=1 Tax=Glo... [more]
H3GTS9_PHYRM3.430e-3936.97ULP_PROTEASE domain-containing protein n=1 Tax=Phy... [more]
A0A329RWA6_9STRA3.780e-3938.72ULP_PROTEASE domain-containing protein n=2 Tax=Phy... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11889contigP-wetherbeei_contig11889:579..1763 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LIB2
Model size825
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons3
Evalue1.84e-67
EggNOG OGs2DSZD@1|root,2S6H1@2759|Eukaryota
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-24_001490.1
Cds size825
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185929.991559-CDS-P-wetherbeei_contig11889:578..7901683185929.991559-CDS-P-wetherbeei_contig11889:578..790Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11889 579..790 -
1683185930.0003862-CDS-P-wetherbeei_contig11889:850..10311683185930.0003862-CDS-P-wetherbeei_contig11889:850..1031Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11889 851..1031 -
1683185930.0090404-CDS-P-wetherbeei_contig11889:1331..17631683185930.0090404-CDS-P-wetherbeei_contig11889:1331..1763Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11889 1332..1763 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11889.1.1prot_P-wetherbeei_contig11889.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig11889 579..1763 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig11889.1.1

>prot_P-wetherbeei_contig11889.1.1 ID=prot_P-wetherbeei_contig11889.1.1|Name=mRNA_P-wetherbeei_contig11889.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=275bp
RNVVFLKLPRCKMPYRWAEPLPPFRSCLSELTEAEPAASGLPELVLRGAL
SGDEVAEQSWLTSAFIDIVMRKFARTYSSTTFMPIEFAAYSLRDGSTRED
MAAARDILGRPVDYAEGKPFVLPFIQNNHWQLLRVQLDPVPELQLFEPMG
KPAKRGGGGGGISARYIPKQVFRWLNAMYPLGEDGVAAADGWPYAASTSA
AAAAGVGEGGGGWMRRSFSAVTRQQQQTGFDCGVASLLYAEKCGQGQLRE
DIDEYTTQGDLTLYRRLLRDYSESL
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mRNA from alignment at P-wetherbeei_contig11889:579..1763-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig11889.1.1 ID=mRNA_P-wetherbeei_contig11889.1.1|Name=mRNA_P-wetherbeei_contig11889.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1185bp|location=Sequence derived from alignment at P-wetherbeei_contig11889:579..1763- (Phaeothamnion wetherbeei SAG_119_79)
CGCAACGTGGTGTTCCTCAAGCTGCCGCGCTGCAAGATGCCGTACCGCTG GGCAGAGCCGCTGCCGCCCTTCCGCTCGTGCCTCTCTGAGCTGACCGAGG CCGAGCCGGCCGCGTCGGGCCTGCCCGAGCTCGTGCTGCGCGGCGCGCTG AGCGGCGATGAGGTGGCAGAGCAGTCGTGGCTCACGTCGGCCTTCATCGA CATTGTAATGCGCAAGTTCGCGCGCACGTACTCGTCGACGACCTTCATGC CCATCGAGTTCGCCGCCTACTCGCTGCGCGATGGCAGCACGCGCGAGGAC ATGGCGGCGGCGCGCGACATCCTCGGGCGGCCGGTGGACTACGCCGAGGG CAAGCCGTTTGTCCTGCCCTTCATCCAGAACAACCATTGGCAGCTGCTGC GCGTCCAGCTTGATCCCGTGCCGGAGCTCCAGGTGAGGCCTTTTGGTTAG AGCGGAGAGAAGGGGGAAATGCGGAAGATCGGCGGGGGGCAGGCTGCGCC GCTACTTGCCTTGTTTTCGGCGGCATACTTGTCACGGCTTTGTCTCTTCC CGTGCTTTAATAAGCTCCTCACCACGCGCGCACCCACCGTTCATCACCGC CTTCGCTTGGAGGGCTCTGGTTGCGCACGGCGTTGCTTTGCTCCTGTTGC GGCATGCACCGCCGCTTCCTTTGCAGCACATCCCACTGCTGTCCGTGGCT CTCCCGCCCCATGCGTCTCGACCCGCACGCAGCTGTTCGAGCCAATGGGC AAACCCGCGAAGCGCGGCGGCGGCGGCGGAGGCATCTCTGCCCGCTACAT TCCCAAGCAGGTCTTCCGCTGGCTCAACGCTATGTACCCGCTCGGTGAGG ACGGCGTCGCCGCCGCCGACGGCTGGCCGTACGCCGCGTCCACTTCCGCC GCCGCCGCCGCCGGTGCTTTCCCGTCCGCGGCCGCCGCTGCGGCTGCCGC CTCGGCGGCGGCGTCGGCGGCAGGCGTCGGTGAGGGGGGTGGCGGCTGGA TGCGGCGGTCATTCAGCGCGGTGACGCGGCAGCAGCAACAGACGGGCTTT GACTGCGGCGTGGCGAGCCTGCTGTACGCTGAGAAGTGCGGGCAGGGGCA GCTCCGCGAAGACATCGATGAGTATACCACCCAGGGGGACCTCACACTGT ACCGCCGCCTCCTGCGCGACTACAGCGAGTCGCTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig11889:579..1763-

>mRNA_P-wetherbeei_contig11889.1.1 ID=mRNA_P-wetherbeei_contig11889.1.1|Name=mRNA_P-wetherbeei_contig11889.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=825bp|location=Sequence derived from alignment at P-wetherbeei_contig11889:579..1763- (Phaeothamnion wetherbeei SAG_119_79)
CGCAACGTGGTGTTCCTCAAGCTGCCGCGCTGCAAGATGCCGTACCGCTG
GGCAGAGCCGCTGCCGCCCTTCCGCTCGTGCCTCTCTGAGCTGACCGAGG
CCGAGCCGGCCGCGTCGGGCCTGCCCGAGCTCGTGCTGCGCGGCGCGCTG
AGCGGCGATGAGGTGGCAGAGCAGTCGTGGCTCACGTCGGCCTTCATCGA
CATTGTAATGCGCAAGTTCGCGCGCACGTACTCGTCGACGACCTTCATGC
CCATCGAGTTCGCCGCCTACTCGCTGCGCGATGGCAGCACGCGCGAGGAC
ATGGCGGCGGCGCGCGACATCCTCGGGCGGCCGGTGGACTACGCCGAGGG
CAAGCCGTTTGTCCTGCCCTTCATCCAGAACAACCATTGGCAGCTGCTGC
GCGTCCAGCTTGATCCCGTGCCGGAGCTCCAGCTGTTCGAGCCAATGGGC
AAACCCGCGAAGCGCGGCGGCGGCGGCGGAGGCATCTCTGCCCGCTACAT
TCCCAAGCAGGTCTTCCGCTGGCTCAACGCTATGTACCCGCTCGGTGAGG
ACGGCGTCGCCGCCGCCGACGGCTGGCCGTACGCCGCGTCCACTTCCGCC
GCCGCCGCCGCCGGCGTCGGTGAGGGGGGTGGCGGCTGGATGCGGCGGTC
ATTCAGCGCGGTGACGCGGCAGCAGCAACAGACGGGCTTTGACTGCGGCG
TGGCGAGCCTGCTGTACGCTGAGAAGTGCGGGCAGGGGCAGCTCCGCGAA
GACATCGATGAGTATACCACCCAGGGGGACCTCACACTGTACCGCCGCCT
CCTGCGCGACTACAGCGAGTCGCTG
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