mRNA_P-wetherbeei_contig11882.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig11882.1.1
Unique NamemRNA_P-wetherbeei_contig11882.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig11882.1.1 vs. uniprot
Match: A0A3D5DB62_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DB62_9GAMM)

HSP 1 Score: 312 bits (799), Expect = 5.050e-100
Identity = 175/389 (44.99%), Postives = 249/389 (64.01%), Query Frame = 1
Query:   34 AALILLTLSLFVSPHLVHYGMGLMALLGVVEA-VRHPAALREWHARQLLLLFALLWLPMVIACANAVAPQHSLRTVVPYLHLLPAAYFVMRACADVDVQRLVTLGAAILLAFVALDAFVQLIWQQDLFGYPYDRKVLKGVFYPKQRLGLILAVFAPLYIDVVIRWCRVHPRLWLLLVPLVVVILMSLKRSAWIMLVFGLLAYVVLHMRLRQAPWSGRRVTQIVLLLVLAAGLAAVNPTLRTRLSDTSGLFSTDAQVIDAATAYRLTLWRTGARIFADHWPTGIGPRGFRHIYADYAAPDDFWIKRIGSGQTHPHQFMLEIAIESGVLGLASFTAFYVLLLRLLSRPTVAKV-VPVWLLAAAVACLPLNAHLAFYGAYWSTLVWLLLAVG 1194
            A LILL+++   + +L HY +G+M LLG+ +    +   +R  +AR L+  FA +W+PM++A  ++V    +L+T   YLH LPA  +++    D  ++R+V  G AI+L F  LD  +QL++ Q+LFGYPYD  VL+G FYPKQR GLILAVF PLYI+ V R+       WLLL+PL++ +L+SLKR+AW+M++  +  Y +   R RQ       V   +  L L    ++V P  +T+++DT  LFS D + +D AT+ RL+LWRTG  +  DHW  GIGPRGFR  Y+++A+PDD+WI    SGQTHPH   LEI IE+GV+GL  +    V+L R + R  +A     V+ + A VA  PLNAHLAFYG+YWS LVW+  A+G
Sbjct:    9 AVLILLSIAGLATENLTHYPVGIMCLLGLYKVRCDYEGVVRSSNARLLIGAFACVWIPMLLALPDSVNLPRALKTTFLYLHFLPAGLYIIYMLRDEFLRRIVWSGLAIILVFWCLDGMIQLVFGQNLFGYPYDGSVLQGAFYPKQRFGLILAVFTPLYINAVQRFAARSVWAWLLLLPLLIAVLLSLKRTAWVMVLASIGFYALCFARPRQLNLRLAIVYSFIAALALIVATSSV-PNFQTQVTDTLELFSADFERVDVATSRRLSLWRTGLSMVHDHWLNGIGPRGFRTAYSEFASPDDYWINHGNSGQTHPHLMSLEILIETGVIGLIGYFFLIVILGREMWRVRLANPRASVYFMIAIVALFPLNAHLAFYGSYWSNLVWISTALG 396          
BLAST of mRNA_P-wetherbeei_contig11882.1.1 vs. uniprot
Match: A0A523P1L6_9PROT (O-antigen ligase family protein n=2 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523P1L6_9PROT)

HSP 1 Score: 306 bits (785), Expect = 9.960e-98
Identity = 173/395 (43.80%), Postives = 240/395 (60.76%), Query Frame = 1
Query:   34 AALILLTLSLFVSPHLVHYGMGLMALLGVVEAVRHPA-ALREWHARQLLLLFALLWLPMVIACANAVAPQHSLRTVVPYLHLLPAAYFVMRACADVDVQRLVTLGAAILLAFVALDAFVQLIWQQDLFGYPYDRKVLKGVFYPKQRLGLILAVFAPLYIDVVIRWCRVHPRLWLLLVPLVVVILMSLKRSAWIMLVFGLLAYVVLHMRLRQAPWSGRRVTQIVLLLVLAAGLAAVNPTLRTRLSDTSGLFSTDAQVIDAATAYRLTLWRTGARIFADHWPTGIGPRGFRHIYADYAAPDDFWIKRIGSGQTHPHQFMLEIAIESGVLGLASFTAFYVLLLRLL-----SRPTVAKVVPVWLLAAAVACLPLNAHLAFYGAYWSTLVWLLLAVGLA 1200
            A L+LL ++   + +L HY + +M LLGV     +P   L    AR L+ +F  +W+PM++A  +A +P  +L+T   YLH LPA  +++    + + +R++ +G   ++ F  +D  VQL+   DLFGYPYD  VL+GVFYPKQR G+I AVF PLY+ VV R        WLLL P V V++ SLKR+AWIM    L  ++   +R+ +A      +   ++   L A  A V P + T+   T  +FS D    D AT++RL+LW+TG  I   HW  G+GPRGFR +Y DYAA DDFWI R   GQTHPH  +LE+ IE+GV+GL  F A   LLLR L     S PT A     +L+ A VA  PLNAHLAFYG+YWS++VW+++A+G A
Sbjct:   15 AVLVLLAIAGLATENLSHYPIAIMCLLGVYHIWLNPQDMLSRADARLLITVFGCIWIPMLLALPDAASPTRALKTTALYLHFLPAGLYIIHGLREFENRRIMLVGLTAIVGFWCVDGMVQLLTGSDLFGYPYDGLVLQGVFYPKQRFGIIFAVFTPLYLYVVHRLAARSALAWLLLAPFVTVVMFSLKRTAWIMFAVALAGFIACFIRVTRANVRSLAIAAGLIAATLVATTAFV-PKVHTQWVGTLKIFSADFAAADLATSHRLSLWKTGLSIARAHWLNGVGPRGFRTVYRDYAAADDFWIARGSKGQTHPHLMILEVLIETGVIGLIGFVACLWLLLRRLVEQRLSDPTAAG----YLMVAIVAWFPLNAHLAFYGSYWSSIVWIMIALGCA 404          
BLAST of mRNA_P-wetherbeei_contig11882.1.1 vs. uniprot
Match: A0A1G0GCP6_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium RBG_16_51_14 TaxID=1798265 RepID=A0A1G0GCP6_9GAMM)

HSP 1 Score: 274 bits (700), Expect = 6.840e-85
Identity = 170/400 (42.50%), Postives = 236/400 (59.00%), Query Frame = 1
Query:    1 GTEQRANSYAKAALILLTLSLFVSPHLVHYGMGLMALLGVVEAVRHPAA-LREWHARQLLLLFALLWLPMVIACANAVAPQHSLRTVVPYLHLLPAAYFVMRACADVDVQRLVTLGAAILLAFVALDAFVQLIWQQDLFGYPYDRKVLKGVFYPKQRLGLILAVFAPLYIDVVIRWCRVHPRLWLLLVPLVVVILMSLKRSAWIMLVFGLLAYVVLHMRLRQAPWSGRRVTQIVLLLVLAAGLAAVNPTLRTRLSDTSGLFSTDAQVIDAATAYRLTLWRTGARIFADHWPTGIGPRGFRHIYADYAAPDDFWIKRIGSGQTHPHQFMLEIAIESGVLGLASFTAFYVLLLRLLSRPTVAK--VVPVWLLAAAVACLPLNAHLAFYGAYWSTLVWLLLAV 1191
            G E  A +YA   LILLTL LF +  L +  MG+MA+LG+ + +  P   LR+   R LLL F  LWLPM+I+ A+AV    S  TV PYLH L A+ F+  +     V+ ++  G  I++ F  +DA +Q    +DLFGYPY    L G+FYPK RLG I AV +P   + + +     P L L++VPL  VIL+S KR AW+ML   ++ Y V      +       ++ + L LV+   L   +P  + R+  + G+FS D +  D ATA RL LW+T   IF  +W  G GPR FR++Y+ YA  DDFW++   SGQTHPHQF++EIA E+G++G+  +  F++ LL  + R   A+      W L   VA  PLNAHLAFYG+YWS+LVWLLL +
Sbjct:   13 GFEWLAANYAWI-LILLTLLLFSTKTLFNIPMGIMAVLGIYQVIITPRKILRDAGVRFLLLAFLCLWLPMLISLADAVDLPVSSETVFPYLHYLFASIFIAVSLRPDRVRHIIHTGIFIIVTFWCVDALIQFFAGKDLFGYPYVPPQLTGMFYPKMRLGYIAAVASPFMFEYIRQNFNDRPWLVLMIVPLCAVILLSGKRVAWLMLAVAVVLYFVYLWITARKISPNIMISSLFLGLVIVTLLYTCHPPFQHRVDQSLGIFSYDYEQADVATARRLDLWKTSIAIFRGNWVNGTGPRSFRNVYSGYADADDFWMENGRSGQTHPHQFVMEIAAETGIIGIIGYFLFWLSLLVAMWREHKAENTFFITWSLCVIVALFPLNAHLAFYGSYWSSLVWLLLPI 411          
BLAST of mRNA_P-wetherbeei_contig11882.1.1 vs. uniprot
Match: A0A3M1DRS5_9GAMM (O-antigen ligase domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M1DRS5_9GAMM)

HSP 1 Score: 246 bits (629), Expect = 1.730e-74
Identity = 160/399 (40.10%), Postives = 210/399 (52.63%), Query Frame = 1
Query:   40 LILLTLSLFVSPHLVHYGMGLMALLGVVEAVRHPAALREWHARQLL-LLFALLWLPMVIACANAVAPQHSLRTVVPYLHLLPAAYFVMRACADVDVQRLVTLGAAILLAFVALDAFVQLIWQQDLFGYPYDRKVLKGVFYPKQRLGLILAVFAPLYIDVVIRWCRVHPRLWLLLVPLVVVILMSLKRSAWIMLVFGLLAYVVLHMRLRQAPWSGRRVTQIVLLLVLAAGLAA-----------VNPTLRTRLSDTSGLFSTDAQVIDAATAYRLTLWRTGARIFADHWPTGIGPRGFRHIYADYAAPDDFWIKRIGSGQTHPHQFMLEIAIESGVLGLASFTAFYVLLLRLLSRPTVAKVVPVWLLAAAVACLPLNAHLAFYGAYWSTLVWLLLAVGLA 1200
            LILLTL L  +    +   GL+ L G+V  +R P  L    A +LL LLF  LWLP++ +  +A  P  +    + Y     A  +V     D D +  +  G   +  F   DA +Q     DLFGYPYDR  L G+FYPK RLG +LA+ APL ++ + R     P +WL L P   VIL+S KR+AW+M    LL             W+G  + +  L   L AGLAA            +P LR       GL S D Q  D AT++R++LW+T   +   HW  G+GPRG+R +Y DYA P DFWI    SGQTHPH  +LEIA E+G +GLA     Y+L L LL R  +    P  ++ A VA +P N   AFYG YWSTLVWL L + +A
Sbjct:   20 LILLTLLLLATKAAFNIAYGLITLAGLVLLIRRPRELLADPAVRLLGLLFLCLWLPILASLPDAANPARAWSNALQYPRFFLAGLYVTVLLGDPDRRDFLLKGVLAVTGFWVADALLQYFSGTDLFGYPYDRGQLTGMFYPKMRLGQLLAILAPLVLEGLRRMAAGRPWVWLWLFPYTAVILLSNKRAAWLMYAVALLL------------WAGHALLRGRLSWRLTAGLAAGAALTVALLLQTSPALRGMTQTAGGLLSGDLQRFDQATSHRVSLWQTALDMARAHWVNGVGPRGYRKVYRDYARPGDFWIAHGASGQTHPHSLLLEIAAETGGIGLAG----YLLFLLLLVRAGLRGADPPLVMTAFVAAMPFNVSNAFYGTYWSTLVWLFLPLAIA 402          
BLAST of mRNA_P-wetherbeei_contig11882.1.1 vs. uniprot
Match: A0A1G0JZQ5_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium RIFCSPLOWO2_02_FULL_61_13 TaxID=1798300 RepID=A0A1G0JZQ5_9GAMM)

HSP 1 Score: 238 bits (607), Expect = 5.390e-71
Identity = 151/392 (38.52%), Postives = 226/392 (57.65%), Query Frame = 1
Query:   40 LILLTLSLFVSPHLVHYGMGLMALLGVVEAVRHPAAL-REWHARQLLLLFALLWLPMVIACANAVAPQHSLRTVVPYLHLLPAAYFVMRACADVDVQRLVTLGAAILLAFVALDAFVQLIWQQDLFGYPYDRKVLKGVFYPKQRLGLILAVFAPLYIDVVIRWCRVHPRLWLLLVPLVV-VILMSLKRSAWIMLVFGLLAYVVLHMRLRQAPWSGRRVTQIVLLLVLA-AGLAAVNPTLRTRLSDTSGLFSTDAQVIDAATAYRLTLWRTGARIFADHWPTGIGPRGFRHIYADYAAPDDFWIKRIGSGQTHPHQFMLEIAIESGVLGLASFTAFYVLLLRLLSRPTVAKV--VPVWLLAAAVACLPLNAHLAFYGAYWSTLVWLLLAVGLA 1200
            L+  TL+LF +  L +    LMA+ G+  +++ P AL RE   R   LLF  +WLP ++A  +A     SL TV+ Y H   A  +++RA  D   +  + +  +I++     DA VQ +   DLFGYPY    L G+FYPK  LG +LAV AP+Y + V + C   P LWLL   L++ V+L+S +R AW+M       Y++   R+     S R +  +  + VL  + + A NP +  R +   GLFS +A+ +D AT++RL LW T   I + HW  G+GPRG+R+++ +YA  D+F+++    GQTHPHQ +LE+A E+G +GL+    F+ L +    R   A +   P WL+A  VA  PLNAH+AFYG+YWS + W +L + LA
Sbjct:   25 LMATTLALFATETLFNVPFWLMAVAGLYLSIKAPRALWREPVLRLAGLLFLCIWLPQLLALPDAANLGRSLETVIAYPHFYFAGVYILRALQDRQTRDRLEMAISIIVTVWIADALVQYVAGADLFGYPYRPGQLTGMFYPKISLGHLLAVLAPVYFETVRQRCGGRPWLWLLAALLLLTVVLLSGRRVAWLMTGLSFAGYILYLYRIN--AMSLRTIALVFAIGVLGGSAVLATNPAVARRTAVLLGLFSGNAKDMDQATSHRLPLWGTALHIASSHWINGVGPRGYRYVFREYAGDDNFYLRNGRDGQTHPHQLVLEVATETGAIGLSGLICFWWLFMTAGWRRLQATLDGAP-WLIAGLVAWWPLNAHMAFYGSYWSAVSWWVLLLLLA 413          
BLAST of mRNA_P-wetherbeei_contig11882.1.1 vs. uniprot
Match: A0A1T2L743_9GAMM (Uncharacterized protein n=1 Tax=Solemya pervernicosa gill symbiont TaxID=642797 RepID=A0A1T2L743_9GAMM)

HSP 1 Score: 236 bits (601), Expect = 3.580e-70
Identity = 157/401 (39.15%), Postives = 225/401 (56.11%), Query Frame = 1
Query:   28 AKAALILLTLSLFVSPHLVHYGMGLMALLGVVEAVRHPAALREWHARQLLLLFALLWLPMVIACANAVAPQHSLRTVVPYLHLLPAAYFVMRACADVDVQRLVTLGAAILLAFVALDAFVQLIWQQDLFGYPYDRKVLKGVFYPKQRLGLILAVFAPLYIDVVIRWCRVHPRLWLLLVPLVVVILMSLKRSAWIMLVFGLLAYVVLHMRL------RQAPWSGRRVTQIVLLLVLAAGLAAVNPTLRTRLSDTSGLFSTDAQVIDAATAYRLTLWRTGARIFADHWPTGIGPRGFRHIYADYAAPDDFWIK-RIGSGQTHPHQFMLEIAIESGVLGLASFTAFYVLLLRLLSRPTV---AKVVPVWLLAAAVACLPLNAHLAFYGAYWSTLVWLLLAVGLA 1200
            A   ++L T  L+  P LV   + L AL  +    R   A  E   R LLLLFALLW+PMV+A   AV+ + SL TVVPY   L     ++        +  + +    LL+  ++DA  Q +   ++ GYPY+ + L G FYP  RLG  LAVF P+Y++ + RW R H  LWLLL+P +  I +S  RSAW++L  GLL Y+    RL      +   W    +  + L+L      A+ +  +R RL  ++GLFSTD + ID ATA R+++W+    +  DHW TG+GPRGFR+++ DYA  D++W   R       PH   LE+ +E+GV+G+  F AF+ +L+   ++ T    +  VP WL+AA VA  PLN +LA Y +YWS+L W LL V LA
Sbjct:   18 ASVVVLLTTRRLYNLPLLV---LALTALYLLARQWRTIIARSEM--RLLLLLFALLWMPMVLALTGAVSLERSLSTVVPYPRFLLGGITLLWLLNGRMARERLHVAVVALLSLWSIDAMWQYLSGHNILGYPYNGERLNGFFYPDFRLGPELAVFLPVYLEGLRRWGRRHWWLWLLLIPYLSAIFLSGTRSAWVLLAVGLLLYLWYLGRLGYLKRVKAVVWGALAIGVVSLVL-----FASTDEAVRERLQKSAGLFSTDIESIDNATAQRVSIWQVAMLMVEDHWLTGVGPRGFRYVFMDYAPEDNYWKNLRRPLAPNQPHLVGLEVLVETGVVGIVGFLAFFWVLITYAAKRTSGFRSDAVP-WLIAALVALFPLNTYLALYASYWSSLSWWLLLVALA 407          
BLAST of mRNA_P-wetherbeei_contig11882.1.1 vs. uniprot
Match: A0A2E2BDA9_9GAMM (Uncharacterized protein n=1 Tax=Thiotrichales bacterium TaxID=2026796 RepID=A0A2E2BDA9_9GAMM)

HSP 1 Score: 232 bits (592), Expect = 1.020e-68
Identity = 155/412 (37.62%), Postives = 223/412 (54.13%), Query Frame = 1
Query:    1 GTEQRANSYAKAALILLTLSLFVSPHLVHYGMGLMALLGVVEAVRHPAALREWHARQLLL--LFALLWLPMVIACANAVAPQHSLRTVVPYLHLLPAAYFVMRACADVDVQRLVTLGAAILLAFVALDAFVQLIWQQDLFGYPY--DRK-----VLKGVFYPKQRLGLILAVFAPLYIDVVIRWCRVHPRLWLLLVP-LVVVILMSLKRSAWIMLVFGLLAYVVLHMRLRQAPWSGRRVTQIVLLLVLAAGLAAVNPT-LRTRLSDTSGLFSTDAQVIDAATAYRLTLWRTGARIFADHWPTGIGPRGFRHIYADYAAPDDFWIKRIGSGQTHPHQFMLEIAIESGVLGLASFTAFY-VLLLRLLSRPTVAKVVPVWLLAAAVACLPLNAHLAFYGAYWSTLVWLLLAVGLA 1200
            G +     +    +I+L      +  LVHY  G MA+ GV   +     L + HA + LL  LF L+WLPM +A  NAVA +HSL T + YLH LPAAYF++ AC+   V   +      L  F+  DA  Q     +L GYP+  D K     VL G FYPK+RL LIL+V  PL     I+  R+    +++L+P    VILM+ KRSAWIML  G+ AY+++   L++         +++ +L        ++ + L  RLS   G FS D + +D A+ YR++LW+TG  +F D    GIGPRGFRH+Y +Y+  D+FWI+    GQTHPH  ++E+ +E+G +G   +   Y   + R  S       +  W L       PLN HLAFYG+YWS+  W+ +A+  A
Sbjct:   11 GPQLSIEGHFYVGIIMLAFCGLATQKLVHYPFGFMAVAGVF--LFXFRRLSQPHAVKFLLPFLFTLVWLPMCLATINAVAMKHSLSTTLEYLHFLPAAYFIIYACSRPGVCFWLEKWFLWLTIFIIFDALFQFFSGYNLIGYPHLGDHKAAGDEVLTGFFYPKERLALILSVLFPLVFHY-IKGARLKIFPYVILLPSYFFVILMTFKRSAWIMLAXGV-AYLLIFFVLKRGVLKSLVSIRVMFILFFTVSAVVLSSSILSDRLSKNLGFFSGDLEQVDVASNYRISLWKTGYMMFKDRPLLGIGPRGFRHVYEEYSEADNFWIQDGRRGQTHPHSNIVEVFVETGXVGFLGYLLXYGYFIFRFFSEEFFTSSLA-WXLTVLXVWCPLNTHLAFYGSYWSSFAWMXVAISXA 417          
BLAST of mRNA_P-wetherbeei_contig11882.1.1 vs. uniprot
Match: A0A6L8EMT1_9GAMM (O-antigen ligase family protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6L8EMT1_9GAMM)

HSP 1 Score: 231 bits (590), Expect = 1.460e-68
Identity = 154/397 (38.79%), Postives = 217/397 (54.66%), Query Frame = 1
Query:   28 AKAALILLTLSLFVSPHLVHYGMGLMALLGVVEAVRHPAAL-REWHARQLLLLFALLWLPMVIACANAVAPQHSLRTVVPYLHLLPAAYFVMRACADVDVQRLVTLGAAILLAFVALDAFVQLIWQQDLFGYPYDRKVLKGVFYPKQRLGLILAVFAPLYIDVVIRWCRVHPRLWLLLVPLVVVILMSLKRSAWIMLVFGLLAY-----VVLHMRLRQAPWSGRRVTQIVLLLVLAAGLAAVNPTLRTRLSDTSGLFSTDAQVIDAATAYRLTLWRTGARIFADHWPTGIGPRGFRHIYADYAAPDDFWIKRIGSGQTHPHQFMLEIAIESGVLGLASFTAFYVLLLRLLSRPTVAKVVPVWLLAAAVACLPLNAHLAFYGAYWSTLVWLLLAVGLA 1200
            A A L+L T +L + P      +G+MA LG+    R P A+ R+   R LL LF  LWLP + + A AV  + S R  + Y   L    F++R  A       ++L   +++ F  +DA VQ     +LFGYPY   +L G+FYPK RLG+ILAV  P+ ++      R     WLLL+P  VV+L+  + SAW+ML   L AY     + L  R R        V      +VLA  +   +P +  R+   +G+ S++ Q  + AT+ R  +W T   +F D+W  G+GPRGFR+ Y DYA  D++++++   GQTHPH   LEIA+E+GV+GLA F  FY+ LLR   +   +     W  A   A  PLNAHLAFYG+YWS  +WLL A  LA
Sbjct:   25 AAALLLLSTDTLSLVP------LGIMAALGIYRFGREPQAICRDRTLRVLLFLFLCLWLPQLFSLAGAVNLERSARIALLYPLYLFCGVFILRELARPGNLSRLSLALLLVVVFWCVDALVQYATGTNLFGYPYQDGMLSGMFYPKLRLGIILAVLVPVALETARNVNRDSLYPWLLLIPFTVVVLLRGRSSAWLMLRIRLSAYQPLVFISLSSRARYIIAGALCVA-----VVLAGTVFYKSPDINRRIVLLTGILSSEYQA-ERATSMRTPIWDTARNMFQDNWLNGVGPRGFRYAYRDYAEEDNYFVRQGQDGQTHPHLVFLEIAVETGVIGLAGFILFYLTLLRYWWQGRHSTTSGAWTAALLAATFPLNAHLAFYGSYWSGFLWLLTACVLA 409          
BLAST of mRNA_P-wetherbeei_contig11882.1.1 vs. uniprot
Match: A0A661BUK9_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661BUK9_9GAMM)

HSP 1 Score: 228 bits (582), Expect = 2.200e-67
Identity = 134/384 (34.90%), Postives = 220/384 (57.29%), Query Frame = 1
Query:   40 LILLTLSLFVSPHLVHYGMGLMALLGVVEAVRHPAALREWHARQLLLLFALLWLPMVIACANAVAPQHSLRTVVPYLHLLPAAYFVMRACADVDVQRLVTLGAAILLAFVALDAFVQLIWQQDLFGYPYDRKVLKGVFYPKQRLGLILAVFAPLYIDVVIRWCRVHPR---LWLLLVPLVVVILMSLKRSAWIMLVFGLLAYVVLHMRLRQAPWSGRRVTQIVLLLVLAAGLAAVNPTLRTRLSDTSGLFSTDAQVIDAATAYRLTLWRTGARIFADHWPTGIGPRGFRHIYADYAAPDDFWIKRIGSGQTHPHQFMLEIAIESGVLGLASFTAFYVLLLRLLSRPTVAKVVP--VWLLAAAVACLPLNAHLAFYGAYWSTLVW 1176
            LIL  L LF +  L +  + +MA+LG    V++PA L+    +   LLFA LW+PM+ +  +A     S +T   Y+H L +  F++      ++ + +  G   ++ F  LDA +Q    ++LFGYPY   +L G+FYPK  L   LA+ +P+Y +    + R H     ++  +V  + V+L+  KRSAWIM + G + Y    + + +     + +   +L++ + + L+   P L+ RL+ TSGLFS + + I+ ATA RL +W TG  I   HW  G+G R FRH+YAD+A+ D+++I    SG THPH  +LE+ IE+G +GL  +  F+++L +      ++K +P   WL++  +A +P N HLAFYG+YW++ +W
Sbjct:   21 LILSALFLFSTKALFNIPLTIMAILGAYRLVKNPALLKVPQIQLSYLLFACLWVPMLFSLVDAEEIFRSSKTTFLYIHFLFSCIFMVDELRKKEILKKIIPGIFFMMTFFCLDAMLQFFTGKNLFGYPYSPPLLGGMFYPKNTLAHFLALLSPVYFE----YMRRHKNNYWMYACVVLYLCVLLLGGKRSAWIMFLGGGVLYAACLIFISKTTEYKKILVPAILIIFVISALSLSYPPLKKRLTVTSGLFSGNYETINKATAKRLPIWETGLVIIKSHWLNGVGARNFRHVYADFASADNYYISDGRSGPTHPHLTVLEVLIETGSIGLIGYLLFWLILAKYARLFLLSKNMPGMCWLISTMLATMPYNTHLAFYGSYWASALW 400          
BLAST of mRNA_P-wetherbeei_contig11882.1.1 vs. uniprot
Match: A0A849MJ66_9PROT (O-antigen ligase family protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A849MJ66_9PROT)

HSP 1 Score: 225 bits (573), Expect = 4.770e-66
Identity = 148/396 (37.37%), Postives = 221/396 (55.81%), Query Frame = 1
Query:   25 YAKAALILLTLSLFVSPHLVHYGMGLMALLGVVEAVRHPAAL-REWHARQLLLLFALLWLPMVIACANAVAPQHSLRTVVPYLHLLPAAYFVMRACADVDVQ-RLVTLGAAILLAFVALDAFVQLIWQQDLFGYPYDRKV-LKGVFYPKQRLGLILAVFAPLYIDVVIRWCRVHPRLWLLLVPLVVVILMSLKRSAWIMLVF---GLLAYVVLHMRLRQAPWSGRRVTQIVLLLVLAAGLAAVNPTLRTRLSDTSGLFSTDAQVIDAATAYRLTLWRTGARIFADHWPTGIGPRGFRHIYADYAAPDDFWIKRIGSGQTHPHQFMLEIAIESGVLGLASFT-AFYVLLLRLLSRPTVAKVVPVWLLAAAVACLPLNAHLAFYGAYWSTLVWLLLAV 1191
            Y    LI LT+  FVS  L +Y + +MA++G+   V  P  + ++   +   ++F  LW+P+ ++  +A   +HS  TV PYL  L A  F+++  +    + + V +   +++ F  +DA +QL+  QD+FGYPYD+ + L G+FYP+  +  I ++ +  Y   V R         LLLVPL +VIL+S +R+AWIML     G L Y+ L    ++          +VL ++L +      PT   RL  T GLFS D   ID A   RL LW T    F  +   GIGPRGFRH Y  YA+PD++W+      QTHPH   LEI  E+G++GL  +  A Y+L+ RLL R  +   +P + L   VA  PLNAH+AFYG+ WS+++WLLL++
Sbjct:   21 YWPCILISLTVIGFVSKSLYNYPISVMAVIGLYRTVTSPKVIWQDETLKSFFIIFLCLWIPLFLSFPDAANQKHSAHTVFPYLRFLFAGIFIIQELSYNKKRIKFVIISIFLIVTFWCIDASLQLVLGQDIFGYPYDKYLGLTGMFYPRNTIAHICSILSVFYFITVHRIALEQKWSLLLLVPLFLVILVSGRRAAWIMLALSSMGFLVYLYLSANNKKQILILIGSISLVLSIILGSTALFHKPT-NNRLKATQGLFSFDYDAIDHAMGMRLQLWETAYSTFKANPINGIGPRGFRHTYQQYASPDNYWVN-----QTHPHLLTLEIMAETGIIGLLGYMLALYLLIHRLLIRKKILDELP-FFLPVLVALFPLNAHMAFYGSIWSSMIWLLLSL 409          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11882.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3D5DB62_9GAMM5.050e-10044.99Uncharacterized protein n=1 Tax=Gammaproteobacteri... [more]
A0A523P1L6_9PROT9.960e-9843.80O-antigen ligase family protein n=2 Tax=Proteobact... [more]
A0A1G0GCP6_9GAMM6.840e-8542.50Uncharacterized protein n=1 Tax=Gammaproteobacteri... [more]
A0A3M1DRS5_9GAMM1.730e-7440.10O-antigen ligase domain-containing protein n=1 Tax... [more]
A0A1G0JZQ5_9GAMM5.390e-7138.52Uncharacterized protein n=1 Tax=Gammaproteobacteri... [more]
A0A1T2L743_9GAMM3.580e-7039.15Uncharacterized protein n=1 Tax=Solemya pervernico... [more]
A0A2E2BDA9_9GAMM1.020e-6837.62Uncharacterized protein n=1 Tax=Thiotrichales bact... [more]
A0A6L8EMT1_9GAMM1.460e-6838.79O-antigen ligase family protein n=1 Tax=Gammaprote... [more]
A0A661BUK9_9GAMM2.200e-6734.90Uncharacterized protein n=1 Tax=Gammaproteobacteri... [more]
A0A849MJ66_9PROT4.770e-6637.37O-antigen ligase family protein n=1 Tax=Proteobact... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11882contigP-wetherbeei_contig11882:391..1590 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1249627.D779_2420
PFAMsWzy_C
Model size1200
Max annot lvl135613|Chromatiales
Hectar predicted targeting categorysignal peptide
Exons1
Evalue1.06e-42
EggNOG OGsCOG3307@1|root,COG3307@2|Bacteria,1N2FC@1224|Proteobacteria,1SA03@1236|Gammaproteobacteria,1X18W@135613|Chromatiales
DescriptionO-Antigen ligase
Cds size1200
COG categoryM
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185929.7806938-CDS-P-wetherbeei_contig11882:390..15901683185929.7806938-CDS-P-wetherbeei_contig11882:390..1590Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11882 391..1590 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11882.1.1prot_P-wetherbeei_contig11882.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig11882 391..1590 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig11882.1.1

>prot_P-wetherbeei_contig11882.1.1 ID=prot_P-wetherbeei_contig11882.1.1|Name=mRNA_P-wetherbeei_contig11882.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=400bp
GTEQRANSYAKAALILLTLSLFVSPHLVHYGMGLMALLGVVEAVRHPAAL
REWHARQLLLLFALLWLPMVIACANAVAPQHSLRTVVPYLHLLPAAYFVM
RACADVDVQRLVTLGAAILLAFVALDAFVQLIWQQDLFGYPYDRKVLKGV
FYPKQRLGLILAVFAPLYIDVVIRWCRVHPRLWLLLVPLVVVILMSLKRS
AWIMLVFGLLAYVVLHMRLRQAPWSGRRVTQIVLLLVLAAGLAAVNPTLR
TRLSDTSGLFSTDAQVIDAATAYRLTLWRTGARIFADHWPTGIGPRGFRH
IYADYAAPDDFWIKRIGSGQTHPHQFMLEIAIESGVLGLASFTAFYVLLL
RLLSRPTVAKVVPVWLLAAAVACLPLNAHLAFYGAYWSTLVWLLLAVGLA
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mRNA from alignment at P-wetherbeei_contig11882:391..1590+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig11882.1.1 ID=mRNA_P-wetherbeei_contig11882.1.1|Name=mRNA_P-wetherbeei_contig11882.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1200bp|location=Sequence derived from alignment at P-wetherbeei_contig11882:391..1590+ (Phaeothamnion wetherbeei SAG_119_79)
GGCACTGAGCAGCGGGCGAACAGCTATGCCAAGGCGGCGCTGATCCTGCT CACCTTGAGCTTGTTCGTCTCTCCGCACCTGGTGCACTACGGCATGGGCC TGATGGCCTTGCTCGGCGTGGTCGAAGCCGTGCGTCATCCCGCCGCGCTG CGCGAGTGGCATGCCCGTCAGCTGTTGCTGCTATTCGCGCTGCTCTGGCT GCCGATGGTGATCGCCTGCGCCAATGCGGTGGCACCCCAGCACAGCCTGC GCACGGTAGTGCCCTATCTGCACTTGTTACCGGCGGCCTATTTCGTGATG CGCGCCTGCGCCGATGTCGACGTGCAGCGGCTGGTGACGCTAGGCGCGGC GATACTGCTGGCCTTTGTCGCGCTCGATGCCTTCGTGCAATTGATCTGGC AGCAGGATCTGTTCGGCTATCCCTACGATCGTAAGGTGCTGAAGGGTGTG TTCTATCCCAAGCAGCGGTTGGGATTGATACTCGCGGTGTTCGCGCCGCT GTATATCGATGTGGTGATCCGCTGGTGTCGTGTGCATCCGCGTTTGTGGT TGCTGCTGGTGCCGTTGGTGGTGGTCATCCTGATGTCCTTGAAGCGCAGC GCGTGGATCATGCTGGTGTTTGGTTTGCTGGCCTATGTGGTGCTGCACAT GCGTTTGCGGCAAGCGCCATGGAGCGGCCGGCGCGTCACGCAGATTGTCT TGTTACTGGTGTTGGCAGCCGGGCTGGCCGCCGTGAATCCGACATTGCGC ACCCGTCTCAGCGATACCAGCGGCCTGTTCTCGACCGATGCGCAGGTGAT CGATGCAGCAACTGCCTATCGCTTGACCTTGTGGCGTACCGGCGCGCGCA TCTTCGCCGATCACTGGCCTACCGGCATTGGCCCGCGTGGCTTTCGGCAC ATCTATGCTGACTATGCAGCACCGGATGATTTCTGGATCAAGCGCATCGG TAGCGGCCAGACCCATCCCCACCAATTCATGCTCGAGATTGCCATTGAGA GCGGTGTGCTGGGACTGGCGTCGTTTACCGCGTTCTATGTCCTGCTGTTG CGCCTGCTCAGCCGACCGACCGTGGCCAAGGTAGTGCCGGTGTGGTTGCT GGCGGCGGCGGTGGCGTGCTTGCCTTTGAACGCCCATCTCGCCTTCTATG GTGCTTACTGGTCGACCTTGGTGTGGCTGCTGTTGGCCGTGGGTCTGGCT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig11882:391..1590+

>mRNA_P-wetherbeei_contig11882.1.1 ID=mRNA_P-wetherbeei_contig11882.1.1|Name=mRNA_P-wetherbeei_contig11882.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1200bp|location=Sequence derived from alignment at P-wetherbeei_contig11882:391..1590+ (Phaeothamnion wetherbeei SAG_119_79)
GGCACTGAGCAGCGGGCGAACAGCTATGCCAAGGCGGCGCTGATCCTGCT
CACCTTGAGCTTGTTCGTCTCTCCGCACCTGGTGCACTACGGCATGGGCC
TGATGGCCTTGCTCGGCGTGGTCGAAGCCGTGCGTCATCCCGCCGCGCTG
CGCGAGTGGCATGCCCGTCAGCTGTTGCTGCTATTCGCGCTGCTCTGGCT
GCCGATGGTGATCGCCTGCGCCAATGCGGTGGCACCCCAGCACAGCCTGC
GCACGGTAGTGCCCTATCTGCACTTGTTACCGGCGGCCTATTTCGTGATG
CGCGCCTGCGCCGATGTCGACGTGCAGCGGCTGGTGACGCTAGGCGCGGC
GATACTGCTGGCCTTTGTCGCGCTCGATGCCTTCGTGCAATTGATCTGGC
AGCAGGATCTGTTCGGCTATCCCTACGATCGTAAGGTGCTGAAGGGTGTG
TTCTATCCCAAGCAGCGGTTGGGATTGATACTCGCGGTGTTCGCGCCGCT
GTATATCGATGTGGTGATCCGCTGGTGTCGTGTGCATCCGCGTTTGTGGT
TGCTGCTGGTGCCGTTGGTGGTGGTCATCCTGATGTCCTTGAAGCGCAGC
GCGTGGATCATGCTGGTGTTTGGTTTGCTGGCCTATGTGGTGCTGCACAT
GCGTTTGCGGCAAGCGCCATGGAGCGGCCGGCGCGTCACGCAGATTGTCT
TGTTACTGGTGTTGGCAGCCGGGCTGGCCGCCGTGAATCCGACATTGCGC
ACCCGTCTCAGCGATACCAGCGGCCTGTTCTCGACCGATGCGCAGGTGAT
CGATGCAGCAACTGCCTATCGCTTGACCTTGTGGCGTACCGGCGCGCGCA
TCTTCGCCGATCACTGGCCTACCGGCATTGGCCCGCGTGGCTTTCGGCAC
ATCTATGCTGACTATGCAGCACCGGATGATTTCTGGATCAAGCGCATCGG
TAGCGGCCAGACCCATCCCCACCAATTCATGCTCGAGATTGCCATTGAGA
GCGGTGTGCTGGGACTGGCGTCGTTTACCGCGTTCTATGTCCTGCTGTTG
CGCCTGCTCAGCCGACCGACCGTGGCCAAGGTAGTGCCGGTGTGGTTGCT
GGCGGCGGCGGTGGCGTGCTTGCCTTTGAACGCCCATCTCGCCTTCTATG
GTGCTTACTGGTCGACCTTGGTGTGGCTGCTGTTGGCCGTGGGTCTGGCT
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