mRNA_P-wetherbeei_contig1185.5.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1185.5.1 vs. uniprot
Match: D8LJN0_ECTSI (Serine/Threonine Dehydratase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJN0_ECTSI) HSP 1 Score: 243 bits (619), Expect = 9.650e-77 Identity = 130/187 (69.52%), Postives = 151/187 (80.75%), Query Frame = 1 Query: 37 LVHPSDDPDVIAGQGTVGLELVRQVAEMTAGGRLDAVVVPVGGGGLLSGVAIAVKALCPGALIVGAEPAAADDAFRSKAAGKVCGHEPAGAAPDTIADGLKTTLGRHTWPVVRDVVDVIITVSEDEIRRWMRVVYERMKLVIEPSSAVGVAVVMSPEFRAMPE-LERVGVILCGGNVDAAQLGALLS 594 L+HP +DP V GQGTVGLELV+QV E T G LDAVVVPVGGGGL++GVA AVKALCPG ++GAEP+ A DAFRSK +G + GH+ G PDTIADGL+TTLG TWPVVRD VD I+TVSE+EIR WMRVVYERMKLVIEPS+AVGVA +MSP R MP+ ++RVGV+LCGGNVD L LL+ Sbjct: 155 LIHPYNDPRVQCGQGTVGLELVQQVKEQTGGAGLDAVVVPVGGGGLITGVATAVKALCPGIRVIGAEPSKAADAFRSKQSGSLQGHDCEG-MPDTIADGLRTTLGSTTWPVVRDSVDEIVTVSEEEIRLWMRVVYERMKLVIEPSAAVGVAALMSPRVRGMPQDVKRVGVVLCGGNVDVTLLQDLLA 340
BLAST of mRNA_P-wetherbeei_contig1185.5.1 vs. uniprot
Match: D7FHM2_ECTSI (Serine Racemase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHM2_ECTSI) HSP 1 Score: 228 bits (582), Expect = 6.790e-71 Identity = 124/201 (61.69%), Postives = 150/201 (74.63%), Query Frame = 1 Query: 1 AADRLVAELGARLVHPSDDPDVIAGQGTVGLELVRQVAEMTAGGRLDAVVVPVGGGGLLSGVAIAVKALCPGALIVGAEPAAADDAFRSKAAGKVCGHEPAGAAPDTIADGLKTTLGRHTWPVVRDVVDVIITVSEDEIRRWMRVVYERMKLVIEPSSAVGVAVVMSPEFRAMP-ELERVGVILCGGNVDAAQLGALLSEA 600 AAD + G+ L+H S+D V G GT+GLELV QV ++T G LDAV+V +GGGGL+SGV AVKALCP A I+GA+P A DAF+SK +G +C A PDTIADGL+T+LG WPVVRD VD I+TVSED+IR WM VVY+RMKLVIEPS+AVGVA +MSP+ RAMP E+ +VGV+LCGGNVD L LLS A Sbjct: 164 AADIVSKLPGSSLIHSSNDARVQCGIGTIGLELVSQVKDLTGGADLDAVIVTIGGGGLISGVTTAVKALCPNARIIGAQPEKAADAFKSKQSGTLCSPAEGEALPDTIADGLRTSLGNKAWPVVRDSVDEIVTVSEDDIRVWMGVVYKRMKLVIEPSAAVGVAALMSPQVRAMPSEMRKVGVVLCGGNVDVTLLQDLLSVA 364
BLAST of mRNA_P-wetherbeei_contig1185.5.1 vs. uniprot
Match: A0A835Z2N3_9STRA (Serine/Threonine dehydratase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2N3_9STRA) HSP 1 Score: 219 bits (558), Expect = 7.980e-66 Identity = 135/245 (55.10%), Postives = 157/245 (64.08%), Query Frame = 1 Query: 4 ADRLVAELGARLVHPSDDPDVIAGQGTVGLELVRQVAEMTAGGRLDAVVVPVGGGGLLSGVAIAVKALCPGALIVGAEPAAADDAFRSK-----------AAGKVC--------------------GHEPA---GAA--------------PDTIADGLKTTLGRHTWPVVRDVVDVIITVSEDEIRRWMRVVYERMKLVIEPSSAVGVAVVMSPEFRAMPELERVGVILCGGNVDAAQLGALLS 594 A LV E A LVH S+DP VI GQGTVGLELV QV EM G LDAV+VPVGGGGLL+GVA+AV+ALCP AL++GAEP+AADDA RSK A +C G +P+ GAA PDT+ADGL+T LG TWPVVRD VD I+TVSEDEIR +R+VYER+KL IEPS+AVGVA +S AMP L R+GV+LCGGNVD AQL LL+ Sbjct: 257 AAALVREHDAVLVHSSNDPRVIDGQGTVGLELVEQVREMCGGADLDAVIVPVGGGGLLAGVAVAVRALCPRALVIGAEPSAADDAARSKVRFCCGVYCAYAGSAMCLEVLVRRFRSVSEVRCALAIGAQPSAADGAARSKAAGMLLEHDTLPDTLADGLRTVLGSWTWPVVRDQVDCIVTVSEDEIRASLRLVYERLKLAIEPSAAVGVAAALSDAVAAMPGLRRIGVVLCGGNVDMAQLARLLA 501
BLAST of mRNA_P-wetherbeei_contig1185.5.1 vs. uniprot
Match: L8GDL9_ACACA (Serine/threonine dehydratase n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GDL9_ACACA) HSP 1 Score: 195 bits (496), Expect = 1.330e-59 Identity = 109/189 (57.67%), Postives = 138/189 (73.02%), Query Frame = 1 Query: 4 ADRLVAELGARLVHPSDDPDVIAGQGTVGLELVRQVAEMTAGGRLDAVVVPVGGGGLLSGVAIAVKALCPGALIVGAEPAAADDAFRSKAAGKVCGHEPAGAAPDTIADGLKTTLGRHTWPVVRDVVDVIITVSEDEIRRWMRVVYERMKLVIEPSSAVGVAVVMSPEFR-AMPELERVGVILCGGNVD 567 ADR+VAE GA +HP ++PDVIAGQ T+ LE + QVA+ LDA++ PVGGGG++SGVAIA KAL PG + GAEP ADDA+RSK AG++ TIADGL+T LG TWPVVRD+VD I TVSE+EI+ MR+V+ERMKLV+EPS AV +A V+S +FR A P++ R+ V+ GGNVD Sbjct: 53 ADRIVAETGAVFIHPYNNPDVIAGQATIALEALEQVAD------LDAIITPVGGGGMMSGVAIAAKALKPGIKVFGAEPKDADDAYRSKEAGELLPQT----GTSTIADGLRTGLGSLTWPVVRDLVDAIYTVSEEEIKAAMRLVWERMKLVVEPSGAVSLAAVLSEDFRKANPDVRRICVVFSGGNVD 231
BLAST of mRNA_P-wetherbeei_contig1185.5.1 vs. uniprot
Match: A0A0F6VZC4_9DELT (Threonine dehydratase, catabolic n=2 Tax=Sandaracinus amylolyticus TaxID=927083 RepID=A0A0F6VZC4_9DELT) HSP 1 Score: 198 bits (503), Expect = 1.500e-59 Identity = 110/187 (58.82%), Postives = 136/187 (72.73%), Query Frame = 1 Query: 4 ADRLVAELGARLVHPSDDPDVIAGQGTVGLELVRQVAEMTAGGRLDAVVVPVGGGGLLSGVAIAVKALCPGALIVGAEPAAADDAFRSKAAGKVCGHEPAGAAPDTIADGLKTTLGRHTWPVVRDVVDVIITVSEDEIRRWMRVVYERMKLVIEPSSAVGVAVVMSPEFRAMPELERVGVILCGGNV 564 A R+VAE GA L+ P D PDVIAGQGT+ LEL+ ++A+ LDA+VVP+GGGG++SG+A+A + L P ++ AEPA ADDA RSKA G + P TIADGL T+LG TWPVVRDVVD +ITV ED I R MR+V+ERMKLVIEPS+AVGVAV +S R + +RVGV+LCGGNV Sbjct: 136 AARVVAETGATLIPPYDHPDVIAGQGTIALELLDEIAD------LDAIVVPIGGGGMISGIALAARELAPRVKVIAAEPAGADDAARSKAGGALVPQT----GPKTIADGLLTSLGSLTWPVVRDVVDRVITVDEDAIVRAMRLVFERMKLVIEPSAAVGVAVALSDAMREVEGAQRVGVVLCGGNV 312
BLAST of mRNA_P-wetherbeei_contig1185.5.1 vs. uniprot
Match: A0A7S3HS14_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HS14_9STRA) HSP 1 Score: 191 bits (486), Expect = 5.600e-59 Identity = 104/169 (61.54%), Postives = 129/169 (76.33%), Query Frame = 1 Query: 10 RLVAELGARLVHPSDDPDVIAGQGTVGLELVRQVAEMTAGGRLDAVVVPVGGGGLLSGVAIAVKALCPGALIVGAEPAAADDAFRSKAAGKVCGHEPAGAAPDTIADGLKTTLGRHTWPVVRDVVDVIITVSEDEIRRWMRVVYERMKLVIEPSSAVGVAVVMSPEFRA 516 ++VAE GA LVHPS+DPDVIAGQGT+GLELV Q E AG L+AV+VP+GGGG++ G+A+AVKAL P L++GAEPA ADDAFRSKA GK+ H+ TIADGLKTTLG +T+P+V+++VD I V ED+I R V+ERMKL IEPS+ +GVAV S FRA Sbjct: 1 KIVAEKGAALVHPSNDPDVIAGQGTIGLELVVQAREHWAGSDLEAVIVPLGGGGMIGGIAVAVKALLPSCLVIGAEPANADDAFRSKAEGKLLSHDK---PVKTIADGLKTTLGTNTFPIVQNLVDEIFLVEEDDIASATRSVWERMKLSIEPSAGIGVAVAASAAFRA 166
BLAST of mRNA_P-wetherbeei_contig1185.5.1 vs. uniprot
Match: A0A4D9D9L6_9STRA (PALP domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D9L6_9STRA) HSP 1 Score: 198 bits (503), Expect = 6.950e-59 Identity = 117/199 (58.79%), Postives = 141/199 (70.85%), Query Frame = 1 Query: 4 ADRLVAELGARLVHPSDDPDVIAGQGTVGLELVRQVAEMTAGGRLDAVVVPVGGGGLLSGVAIAVKALCPGALIVGAEPAAADDAFRSKAAGKVCGHEPAGAAPDTIADGLKTTLGRHTWPVVR-DVVDVIITVSEDEIRRWMRVVYERMKLVIEPSSAVGVAVVM-SPEFRAMPEL--ERVGVILCGGNVDAAQLGAL 588 A LVA G LVHPSDD V+AGQGTV LE + QV E T G LDA+++PVGGGGLL G+A+A KAL P I+GAEP+ DDAFRSKAAG +C H +P +IADGL T LG+ T+P+V D VD IITVSE EI + MR+VYERMKLVIEPS+ VGVAV M E A+ + RVGV+LCGGN+D +L + Sbjct: 154 AGELVASTGGALVHPSDDYPVMAGQGTVALEFLEQVEEETGGKSLDALIIPVGGGGLLGGMAVAAKALHPHIKIIGAEPSMVDDAFRSKAAGHLCLHPSP--SPRSIADGLLTVLGQRTYPIVSSDKVDAIITVSEQEIAQAMRLVYERMKLVIEPSAGVGVAVAMRGDELEAVLGIGCRRVGVVLCGGNLDMDRLDGI 350
BLAST of mRNA_P-wetherbeei_contig1185.5.1 vs. uniprot
Match: H2ZWY8_LATCH (PALP domain-containing protein n=2 Tax=Latimeria chalumnae TaxID=7897 RepID=H2ZWY8_LATCH) HSP 1 Score: 194 bits (494), Expect = 4.850e-58 Identity = 109/200 (54.50%), Postives = 148/200 (74.00%), Query Frame = 1 Query: 10 RLVAELGARLVHPSDDPDVIAGQGTVGLELVRQVAEMTAGGRLDAVVVPVGGGGLLSGVAIAVKALCPGALIVGAEPAAADDAFRSKAAGKVCGHEPAGAAPDTIADGLKTTLGRHTWPVVRDVVDVIITVSEDEIRRWMRVVYERMKLVIEPSSAVGVAVVMSPEFRAMPE-LERVGVILCGGNVDAAQLGAL--LSEA 600 +L AE+ A +H SD P+VIAGQGT+G+EL++QV E LDAVVVPVGGGG+L+G+AIA+KAL P I GAEP ADD ++SK G++ P + PDTIADG K ++G TWP+++D+VD + TV+EDEI++ +V+ERMKLVIEP++ +G+AVV+S F+++PE L+ V VILCGGNVD L L LSE+ Sbjct: 144 KLAAEMEALTIHSSDTPEVIAGQGTIGMELLQQVPE------LDAVVVPVGGGGMLAGIAIAIKALRPNVKIYGAEPQNADDCYQSKQRGQLT---PNPSPPDTIADGAKLSIGPKTWPIIQDLVDDVFTVTEDEIKQATCLVWERMKLVIEPTAGLGMAVVLSERFQSLPENLKNVAVILCGGNVDLGSLSWLKNLSES 334
BLAST of mRNA_P-wetherbeei_contig1185.5.1 vs. uniprot
Match: A0A7S2Y2H5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y2H5_9STRA) HSP 1 Score: 193 bits (491), Expect = 1.790e-57 Identity = 105/200 (52.50%), Postives = 140/200 (70.00%), Query Frame = 1 Query: 1 AADRLVAELGARLVHPSDDPDVIAGQGTVGLELVRQVAEMTAGGRLDAVVVPVGGGGLLSGVAIAVKALCPGALIVGAEPAAADDAFRSKAAGKVCGHEPAGAAPDTIADGLKTTLGRHTWPVVRDVVDVIITVSEDEIRRWMRVVYERMKLVIEPSSAVGVAVVM-SPEFRAMPELERVGVILCGGNVDAAQLGALLSE 597 A ++ ELGA+ VHP DP V+ GQGTVGLELV QV EMT G +DAV+VPVGGGGL SGVA+AVKA+ PG ++G EP A A S+ AG + + P+T+ADGL+ ++G TWP++RDVVD ++TVSE +I+ +++V RMKL IEPS+AV +A + S + + L R+GVILCGGNVD ++L LLS Sbjct: 151 ATEKAQEELGAKYVHPHQDPHVVCGQGTVGLELVEQVREMTGGMDMDAVLVPVGGGGLCSGVAVAVKAMSPGTKVIGVEPEMASSAKPSREAGNLISMN---SLPNTLADGLRVSVGPITWPIMRDVVDDVVTVSEAQIQDTLKLVVSRMKLAIEPSAAVALAAALYSEDIKKKEGLHRIGVILCGGNVDMSRLSNLLSS 347
BLAST of mRNA_P-wetherbeei_contig1185.5.1 vs. uniprot
Match: A0A7K9VH74_ANSSE (SRR racemase (Fragment) n=6 Tax=Neognathae TaxID=8825 RepID=A0A7K9VH74_ANSSE) HSP 1 Score: 190 bits (482), Expect = 6.820e-57 Identity = 100/193 (51.81%), Postives = 145/193 (75.13%), Query Frame = 1 Query: 4 ADRLVAELGARLVHPSDDPDVIAGQGTVGLELVRQVAEMTAGGRLDAVVVPVGGGGLLSGVAIAVKALCPGALIVGAEPAAADDAFRSKAAGKVCGHEPAGAAPDTIADGLKTTLGRHTWPVVRDVVDVIITVSEDEIRRWMRVVYERMKLVIEPSSAVGVAVVMSPEFRAMP-ELERVGVILCGGNVDAAQL 579 A R+V E G +VHP+ +P VIAGQGT+ LE++ QV E+ +AVVVPVGGGGL++G+A+A+KAL P + AEP ADD ++SK G++ P PDTIAD +K+++G +TWP++RD+VD ++TVSE+EI+R R+V+ERMKL+IEP++ VGVA V+S +F+A+P ++E V ++LCGGNVD + L Sbjct: 89 AARVVQETGGVMVHPNQEPAVIAGQGTIALEVLEQVPEV------NAVVVPVGGGGLIAGIAVAIKALRPDVKVFAAEPRNADDCYQSKVRGELT---PNLHTPDTIADAVKSSIGENTWPIIRDLVDDVLTVSEEEIKRATRLVWERMKLLIEPTAGVGVAAVLSEQFQAVPRDVENVCIVLCGGNVDLSSL 272 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1185.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1185.5.1 >prot_P-wetherbeei_contig1185.5.1 ID=prot_P-wetherbeei_contig1185.5.1|Name=mRNA_P-wetherbeei_contig1185.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=201bp AADRLVAELGARLVHPSDDPDVIAGQGTVGLELVRQVAEMTAGGRLDAVVback to top mRNA from alignment at P-wetherbeei_contig1185:6857..7698- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1185.5.1 ID=mRNA_P-wetherbeei_contig1185.5.1|Name=mRNA_P-wetherbeei_contig1185.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=842bp|location=Sequence derived from alignment at P-wetherbeei_contig1185:6857..7698- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1185:6857..7698- >mRNA_P-wetherbeei_contig1185.5.1 ID=mRNA_P-wetherbeei_contig1185.5.1|Name=mRNA_P-wetherbeei_contig1185.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=603bp|location=Sequence derived from alignment at P-wetherbeei_contig1185:6857..7698- (Phaeothamnion wetherbeei SAG_119_79)back to top |