mRNA_P-wetherbeei_contig11847.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig11847.1.1
Unique NamemRNA_P-wetherbeei_contig11847.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig11847.1.1 vs. uniprot
Match: A0A5A8C932_CAFRO (Kinesin motor domain-containing protein n=4 Tax=Sar TaxID=2698737 RepID=A0A5A8C932_CAFRO)

HSP 1 Score: 90.5 bits (223), Expect = 5.350e-20
Identity = 41/48 (85.42%), Postives = 46/48 (95.83%), Query Frame = 1 
Query:    1 KVFEDAKRLVQSAFDGFNVCIFAYGQTGSGKTFTMSGTSDLPGLTPRA 144
            +VFED +RLVQSAFDGFNVCIFAYGQTGSGKTFTMSG+ D+PG+TPRA
Sbjct: 1244 EVFEDTERLVQSAFDGFNVCIFAYGQTGSGKTFTMSGSPDMPGITPRA 1291
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BLAST of mRNA_P-wetherbeei_contig11847.1.1 vs. uniprot
Match: A0A5A8CJI1_CAFRO (Kinesin motor domain-containing protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CJI1_CAFRO)

HSP 1 Score: 90.5 bits (223), Expect = 5.350e-20
Identity = 41/48 (85.42%), Postives = 46/48 (95.83%), Query Frame = 1 
Query:    1 KVFEDAKRLVQSAFDGFNVCIFAYGQTGSGKTFTMSGTSDLPGLTPRA 144
            +VFED +RLVQSAFDGFNVCIFAYGQTGSGKTFTMSG+ D+PG+TPRA
Sbjct: 1094 EVFEDTERLVQSAFDGFNVCIFAYGQTGSGKTFTMSGSPDMPGITPRA 1141
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BLAST of mRNA_P-wetherbeei_contig11847.1.1 vs. uniprot
Match: A0A836C7Z6_9STRA (Kinesin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7Z6_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 3.980e-18
Identity = 38/47 (80.85%), Postives = 43/47 (91.49%), Query Frame = 1 
Query:    1 KVFEDAKRLVQSAFDGFNVCIFAYGQTGSGKTFTMSGTSDLPGLTPR 141
            +VFED K LV+SA DGFNVC+FAYGQTGSGKTFTMSGT ++PGLTPR
Sbjct:   60 EVFEDMKNLVRSAMDGFNVCVFAYGQTGSGKTFTMSGTPEMPGLTPR 106
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BLAST of mRNA_P-wetherbeei_contig11847.1.1 vs. uniprot
Match: A0A7S0SVK5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SVK5_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 5.880e-18
Identity = 37/47 (78.72%), Postives = 43/47 (91.49%), Query Frame = 1 
Query:    1 KVFEDAKRLVQSAFDGFNVCIFAYGQTGSGKTFTMSGTSDLPGLTPR 141
            +VFE+A+RLV+S  DGFNVCIFAYGQTGSGKTFTM+GT + PGLTPR
Sbjct:  142 QVFEEAQRLVESFLDGFNVCIFAYGQTGSGKTFTMTGTPESPGLTPR 188
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BLAST of mRNA_P-wetherbeei_contig11847.1.1 vs. uniprot
Match: A0A482SJC9_9ARCH (Kinesin motor domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SJC9_9ARCH)

HSP 1 Score: 84.3 bits (207), Expect = 6.280e-18
Identity = 37/48 (77.08%), Postives = 44/48 (91.67%), Query Frame = 1 
Query:    1 KVFEDAKRLVQSAFDGFNVCIFAYGQTGSGKTFTMSGTSDLPGLTPRA 144
            +VFED KRLV+S  DGFNVC+FAYGQTGSGKTFTM+G+S +PGLTP+A
Sbjct:  178 QVFEDTKRLVESCMDGFNVCLFAYGQTGSGKTFTMTGSSSMPGLTPKA 225
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BLAST of mRNA_P-wetherbeei_contig11847.1.1 vs. uniprot
Match: K3W8F7_GLOUD (Kinesin motor domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W8F7_GLOUD)

HSP 1 Score: 84.0 bits (206), Expect = 1.070e-17
Identity = 38/48 (79.17%), Postives = 43/48 (89.58%), Query Frame = 1 
Query:    1 KVFEDAKRLVQSAFDGFNVCIFAYGQTGSGKTFTMSGTSDLPGLTPRA 144
            +VFED K L+QSA DGFNVCIFAYGQTGSGKTFTM+GT  +PGL+PRA
Sbjct: 1322 QVFEDTKNLLQSALDGFNVCIFAYGQTGSGKTFTMTGTETMPGLSPRA 1369
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BLAST of mRNA_P-wetherbeei_contig11847.1.1 vs. uniprot
Match: A0A8K1CB49_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CB49_PYTOL)

HSP 1 Score: 84.0 bits (206), Expect = 1.070e-17
Identity = 38/48 (79.17%), Postives = 43/48 (89.58%), Query Frame = 1 
Query:    1 KVFEDAKRLVQSAFDGFNVCIFAYGQTGSGKTFTMSGTSDLPGLTPRA 144
            +VFED K L+QSA DG+NVCIFAYGQTGSGKTFTM+G+  LPGLTPRA
Sbjct: 1139 EVFEDTKNLLQSAIDGYNVCIFAYGQTGSGKTFTMTGSESLPGLTPRA 1186
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BLAST of mRNA_P-wetherbeei_contig11847.1.1 vs. uniprot
Match: A0A067BRV6_SAPPC (Kinesin-like protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BRV6_SAPPC)

HSP 1 Score: 83.2 bits (204), Expect = 1.250e-17
Identity = 37/47 (78.72%), Postives = 43/47 (91.49%), Query Frame = 1 
Query:    1 KVFEDAKRLVQSAFDGFNVCIFAYGQTGSGKTFTMSGTSDLPGLTPR 141
            +VFED K L+QSA DG+NVCIFAYGQTGSGKTFTM+GT+D PG+TPR
Sbjct:   60 QVFEDTKNLLQSALDGYNVCIFAYGQTGSGKTFTMTGTADHPGITPR 106
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BLAST of mRNA_P-wetherbeei_contig11847.1.1 vs. uniprot
Match: A0A5J4Y890_9CHLO (Kinesin-like calmodulin-binding protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y890_9CHLO)

HSP 1 Score: 83.2 bits (204), Expect = 1.990e-17
Identity = 39/47 (82.98%), Postives = 41/47 (87.23%), Query Frame = 1 
Query:    1 KVFEDAKRLVQSAFDGFNVCIFAYGQTGSGKTFTMSGTSDLPGLTPR 141
            KVFED K LVQSA DG+NVCIFAYGQTGSGKTFT+ GT D PGLTPR
Sbjct:  963 KVFEDTKHLVQSAVDGYNVCIFAYGQTGSGKTFTIYGTDDNPGLTPR 1009
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BLAST of mRNA_P-wetherbeei_contig11847.1.1 vs. uniprot
Match: T0QAH1_SAPDV (Kinesin motor domain-containing protein n=2 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QAH1_SAPDV)

HSP 1 Score: 83.2 bits (204), Expect = 2.000e-17
Identity = 37/47 (78.72%), Postives = 43/47 (91.49%), Query Frame = 1 
Query:    1 KVFEDAKRLVQSAFDGFNVCIFAYGQTGSGKTFTMSGTSDLPGLTPR 141
            +VFED K L+QSA DG+NVCIFAYGQTGSGKTFTM+GT+D PG+TPR
Sbjct: 1069 QVFEDTKNLLQSALDGYNVCIFAYGQTGSGKTFTMTGTADHPGITPR 1115
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11847.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8C932_CAFRO5.350e-2085.42Kinesin motor domain-containing protein n=4 Tax=Sa... [more]
A0A5A8CJI1_CAFRO5.350e-2085.42Kinesin motor domain-containing protein n=1 Tax=Ca... [more]
A0A836C7Z6_9STRA3.980e-1880.85Kinesin-like protein n=1 Tax=Tribonema minus TaxID... [more]
A0A7S0SVK5_9STRA5.880e-1878.72Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
A0A482SJC9_9ARCH6.280e-1877.08Kinesin motor domain-containing protein n=1 Tax=ar... [more]
K3W8F7_GLOUD1.070e-1779.17Kinesin motor domain-containing protein n=1 Tax=Gl... [more]
A0A8K1CB49_PYTOL1.070e-1779.17Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A067BRV6_SAPPC1.250e-1778.72Kinesin-like protein n=1 Tax=Saprolegnia parasitic... [more]
A0A5J4Y890_9CHLO1.990e-1782.98Kinesin-like calmodulin-binding protein n=1 Tax=Tr... [more]
T0QAH1_SAPDV2.000e-1778.72Kinesin motor domain-containing protein n=2 Tax=Sa... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11847contigP-wetherbeei_contig11847:1761..1904 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog42099.EPrPV00000014840
PFAMsKinesin
Model size144
Max annot lvl121069|Pythiales
Hectar predicted targeting categoryno signal peptide or anchor
Exons1
Evalue9.4e-19
EggNOG OGsCOG5059@1|root,KOG0239@2759|Eukaryota,1MEPG@121069|Pythiales
DescriptionSource PGD
Cds size144
COG categoryZ
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185928.3020837-CDS-P-wetherbeei_contig11847:1760..19041683185928.3020837-CDS-P-wetherbeei_contig11847:1760..1904Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11847 1761..1904 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11847.1.1prot_P-wetherbeei_contig11847.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig11847 1761..1904 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig11847.1.1

>prot_P-wetherbeei_contig11847.1.1 ID=prot_P-wetherbeei_contig11847.1.1|Name=mRNA_P-wetherbeei_contig11847.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=48bp
KVFEDAKRLVQSAFDGFNVCIFAYGQTGSGKTFTMSGTSDLPGLTPRA
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mRNA from alignment at P-wetherbeei_contig11847:1761..1904+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig11847.1.1 ID=mRNA_P-wetherbeei_contig11847.1.1|Name=mRNA_P-wetherbeei_contig11847.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=144bp|location=Sequence derived from alignment at P-wetherbeei_contig11847:1761..1904+ (Phaeothamnion wetherbeei SAG_119_79)
AAGGTGTTCGAGGACGCCAAGCGGCTGGTGCAGAGTGCGTTTGACGGCTT
CAACGTCTGCATCTTCGCCTACGGCCAGACGGGCTCTGGCAAGACCTTCA
CCATGTCCGGCACCTCCGACTTGCCGGGCCTGACGCCGCGGGCC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig11847:1761..1904+

>mRNA_P-wetherbeei_contig11847.1.1 ID=mRNA_P-wetherbeei_contig11847.1.1|Name=mRNA_P-wetherbeei_contig11847.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=144bp|location=Sequence derived from alignment at P-wetherbeei_contig11847:1761..1904+ (Phaeothamnion wetherbeei SAG_119_79)
AAGGTGTTCGAGGACGCCAAGCGGCTGGTGCAGAGTGCGTTTGACGGCTT
CAACGTCTGCATCTTCGCCTACGGCCAGACGGGCTCTGGCAAGACCTTCA
CCATGTCCGGCACCTCCGACTTGCCGGGCCTGACGCCGCGGGCC
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