mRNA_P-wetherbeei_contig11811.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig11811.1.1
Unique NamemRNA_P-wetherbeei_contig11811.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig11811.1.1 vs. uniprot
Match: A0A6S9GJK0_HETAK (Inosine triphosphate pyrophosphatase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9GJK0_HETAK)

HSP 1 Score: 200 bits (509), Expect = 2.700e-61
Identity = 97/171 (56.73%), Postives = 122/171 (71.35%), Query Frame = 1
Query:    1 ITFVTGNPNKLIEARMIM-EAWDDVVPVELRNLPLDLPEIQGCHLEISRAKCRLAAEAAGGAVVVEDTALCFNSLNGMPGPYIKWFVEAVSNEGLYKMLAAHDDKSAYAQCALSFCMGPGHEPFTFVGRADGTIVAPKGDAGFGWDKIMKPHGSDRTFAEMAKEDKNKISH 510
            ITFVTGN NKL E RMI+  A+D     E+ N+ LDLPE QG    IS+ KC++AA+  GG V+VEDT+LCFN + GMPGPY+KWF +AV N G+Y+ML   +D++ YAQCALSF +GPGHEP TF+G  +G IV P  D  FGWD I +P+G    F+ M K +KNKISH
Sbjct:   69 ITFVTGNTNKLQEVRMIVASAFDSAF--EVTNMELDLPEFQGDPETISKEKCKMAAQQVGGPVIVEDTSLCFNGIGGMPGPYVKWFHKAVGNRGMYRMLEGFEDRTGYAQCALSFALGPGHEPQTFIGVVNGHIVEPGPDNDFGWDPIFQPNGYSTCFSGMPKSEKNKISH 237          
BLAST of mRNA_P-wetherbeei_contig11811.1.1 vs. uniprot
Match: A0A2R6XAI5_MARPO (Inosine triphosphate pyrophosphatase n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XAI5_MARPO)

HSP 1 Score: 196 bits (497), Expect = 8.930e-61
Identity = 95/170 (55.88%), Postives = 120/170 (70.59%), Query Frame = 1
Query:    1 ITFVTGNPNKLIEARMIMEAWDDVVPVELRNLPLDLPEIQGCHLEISRAKCRLAAEAAGGAVVVEDTALCFNSLNGMPGPYIKWFVEAVSNEGLYKMLAAHDDKSAYAQCALSFCMGPGHEPFTFVGRADGTIVAPKGDAGFGWDKIMKPHGSDRTFAEMAKEDKNKISH 510
            +TFVTGN NKL E +MI+      +P   R++ LDLPE+QG   +IS+ KCRLAA+   G V+VEDT LCFN+L G+PGPY+KWF++   +EGL  +LAA++DKSAYA C  S  +GP  EP TF GR +G IV  +G   FGWD + +P G D TFAEM KEDKNKISH
Sbjct:   14 VTFVTGNANKLEEVKMIL---GQTIP--FRSVKLDLPELQGEPEDISKEKCRLAAKEVNGPVLVEDTCLCFNALKGLPGPYVKWFLQKTGHEGLNNLLAAYEDKSAYALCVFSLALGPDAEPLTFSGRTEGKIVPARGPGDFGWDPVFQPDGYDLTFAEMKKEDKNKISH 178          
BLAST of mRNA_P-wetherbeei_contig11811.1.1 vs. uniprot
Match: R1FN82_EMIHU (Inosine triphosphate pyrophosphatase n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FN82_EMIHU)

HSP 1 Score: 195 bits (496), Expect = 1.480e-60
Identity = 97/170 (57.06%), Postives = 115/170 (67.65%), Query Frame = 1
Query:    1 ITFVTGNPNKLIEARMIMEAWDDVVPVELRNLPLDLPEIQGCHLEISRAKCRLAAEAAGGAVVVEDTALCFNSLNGMPGPYIKWFVEAVSNEGLYKMLAAHDDKSAYAQCALSFCMGPGHEPFTFVGRADGTIVAPKGDAGFGWDKIMKPHGSDRTFAEMAKEDKNKISH 510
            +TFVTGN  KL E R I+    D +PV + +  LDLPE+QG   EIS  KCRLAAE  GG V VEDT+LCFN+L G+PGPYIKWF+E   +EGL  +LAA+ DKSAYAQC   F  GPG  P TF GR  G IV  +G   FGWD + +P G   T+AEM K +KNKISH
Sbjct:    8 VTFVTGNAKKLEEVRAILGG--DALPVRIVSQKLDLPELQGEPEEISSEKCRLAAEQVGGPVFVEDTSLCFNALGGLPGPYIKWFLEKTGHEGLNNLLAAYPDKSAYAQCIFGFSAGPGQTPITFDGRTPGQIVPARGPTDFGWDPVFQPEGYSETYAEMDKAEKNKISH 175          
BLAST of mRNA_P-wetherbeei_contig11811.1.1 vs. uniprot
Match: A0A7S0VHY9_9CRYP (Inosine triphosphate pyrophosphatase n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VHY9_9CRYP)

HSP 1 Score: 194 bits (494), Expect = 2.890e-60
Identity = 93/170 (54.71%), Postives = 123/170 (72.35%), Query Frame = 1
Query:    1 ITFVTGNPNKLIEARMIMEAWDDVVPVELRNLPLDLPEIQGCHLEISRAKCRLAAEAAGGAVVVEDTALCFNSLNGMPGPYIKWFVEAVSNEGLYKMLAAHDDKSAYAQCALSFCMGPGHEPFTFVGRADGTIVAPKGDAGFGWDKIMKPHGSDRTFAEMAKEDKNKISH 510
            ITFVTGN  KL E R I+    + +P+   ++ +DLPE+QG   E+S+ KCRLAA+ +GG V+VEDT+LCFN+LNG+PG YIKWF+E + +EGL  ML A+DDKSAYAQC  ++  GPG EP  FVGR +G +V  +G   FGWD + +P G D+T+AE+ KE KN ISH
Sbjct:   19 ITFVTGNAKKLAEVRAIV---GEELPMV--SMKIDLPELQGAPEEVSKEKCRLAAKESGGPVLVEDTSLCFNALNGLPGVYIKWFLEGIGHEGLNNMLMAYDDKSAYAQCIFAYSKGPGEEPVVFVGRTEGKVVPARGPLDFGWDPVFQPDGYDKTYAELDKEVKNSISH 183          
BLAST of mRNA_P-wetherbeei_contig11811.1.1 vs. uniprot
Match: A0A2P2Q4E4_RHIMU (Inosine triphosphate pyrophosphatase n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2Q4E4_RHIMU)

HSP 1 Score: 196 bits (498), Expect = 2.900e-60
Identity = 100/170 (58.82%), Postives = 118/170 (69.41%), Query Frame = 1
Query:    1 ITFVTGNPNKLIEARMIMEAWDDVVPVELRNLPLDLPEIQGCHLEISRAKCRLAAEAAGGAVVVEDTALCFNSLNGMPGPYIKWFVEAVSNEGLYKMLAAHDDKSAYAQCALSFCMGPGHEPFTFVGRADGTIVAPKGDAGFGWDKIMKPHGSDRTFAEMAKEDKNKISH 510
            +TFVTGN  KL E R I+      +P   R+L +DLPE+QG    IS+ K RLAAE A G V+VEDT LCFN+  G+PGPYIKWF+E + NEGLYK+L   DDKSAYA C  SF  G G EP TF GR  G IV PKG  GFGWD I +P G + TFAEM++E+KNKISH
Sbjct:   13 VTFVTGNAKKLEEVRSII---GQAIP--FRSLKIDLPELQGEPDHISKQKARLAAEKANGPVLVEDTCLCFNAFEGLPGPYIKWFLEKIGNEGLYKLLKEFDDKSAYALCVFSFSTGAGAEPVTFEGRTLGKIVHPKGSDGFGWDPIFQPDGYELTFAEMSQEEKNKISH 177          
BLAST of mRNA_P-wetherbeei_contig11811.1.1 vs. uniprot
Match: A0A8B7CQU0_PHODC (Inosine triphosphate pyrophosphatase n=2 Tax=Arecaceae TaxID=4710 RepID=A0A8B7CQU0_PHODC)

HSP 1 Score: 194 bits (493), Expect = 1.110e-59
Identity = 95/170 (55.88%), Postives = 121/170 (71.18%), Query Frame = 1
Query:    1 ITFVTGNPNKLIEARMIMEAWDDVVPVELRNLPLDLPEIQGCHLEISRAKCRLAAEAAGGAVVVEDTALCFNSLNGMPGPYIKWFVEAVSNEGLYKMLAAHDDKSAYAQCALSFCMGPGHEPFTFVGRADGTIVAPKGDAGFGWDKIMKPHGSDRTFAEMAKEDKNKISH 510
            +TFVTGN  KL E R I+   D+ +P E  +L LDLPE+QG   EIS+ K R+AA    G V+VEDT LCFN+LNG+PGPYIKWF++   +EGL  +L A++DK+AYA C  S  +GP  EP TF+G+  G IV P+G A FGWD I +P G D+T+AEM KE+KNKISH
Sbjct:   46 VTFVTGNAKKLEEVRAIL---DNSIPFE--SLKLDLPELQGEPEEISKEKARIAAVKVNGPVLVEDTCLCFNALNGLPGPYIKWFLQKTGHEGLNNILMAYEDKTAYAMCIFSLALGPTEEPITFIGKTQGKIVHPRGPADFGWDPIFQPDGYDQTYAEMPKEEKNKISH 210          
BLAST of mRNA_P-wetherbeei_contig11811.1.1 vs. uniprot
Match: A0A151Z6V2_9MYCE (Inosine triphosphate pyrophosphatase n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151Z6V2_9MYCE)

HSP 1 Score: 192 bits (487), Expect = 1.950e-59
Identity = 90/170 (52.94%), Postives = 117/170 (68.82%), Query Frame = 1
Query:    1 ITFVTGNPNKLIEARMIMEAWDDVVPVELRNLPLDLPEIQGCHLEISRAKCRLAAEAAGGAVVVEDTALCFNSLNGMPGPYIKWFVEAVSNEGLYKMLAAHDDKSAYAQCALSFCMGPGHEPFTFVGRADGTIVAPKGDAGFGWDKIMKPHGSDRTFAEMAKEDKNKISH 510
            + FVTGN  KL E   +++     +P+E R +  DLPE+QG  +EIS+ KC+LAA+   G V+ EDT LCFN L G+PGPYIKWF+E +  EGLYK+L    DK+ YA C  ++C GPGHEP  FVGR DGTIV P+G   FGWD + +P G D+T+AE+ K  KN+ISH
Sbjct:    5 VVFVTGNAKKLEE---VLQIIGKAIPLESRKI--DLPELQGDPIEISKEKCKLAAKEVNGPVLCEDTCLCFNGLEGLPGPYIKWFLEKLKPEGLYKLLDGFPDKTGYALCNFAYCEGPGHEPIVFVGRTDGTIVPPRGPRDFGWDPVFQPDGFDKTYAELDKSIKNQISH 169          
BLAST of mRNA_P-wetherbeei_contig11811.1.1 vs. uniprot
Match: A0A0A0L4S4_CUCSA (Inosine triphosphate pyrophosphatase n=8 Tax=Cucurbitaceae TaxID=3650 RepID=A0A0A0L4S4_CUCSA)

HSP 1 Score: 192 bits (488), Expect = 2.140e-59
Identity = 96/170 (56.47%), Postives = 120/170 (70.59%), Query Frame = 1
Query:    1 ITFVTGNPNKLIEARMIMEAWDDVVPVELRNLPLDLPEIQGCHLEISRAKCRLAAEAAGGAVVVEDTALCFNSLNGMPGPYIKWFVEAVSNEGLYKMLAAHDDKSAYAQCALSFCMGPGHEPFTFVGRADGTIVAPKGDAGFGWDKIMKPHGSDRTFAEMAKEDKNKISH 510
            +TFVTGN  KL E R I+    + +P   R+L LDLPE+QG   +IS+ K RLAA    G V+VEDT LCFN+L G+PGPYIKWF+E + +EGL  +L A++DKSAYA C  SF +GP  EP TFVG+  G IV P+G   FGWD I +P G D+T+AEM KE+KNKISH
Sbjct:   13 VTFVTGNVKKLEEVRAIL---GNSIP--FRSLKLDLPELQGEPEDISKEKARLAAIKVNGPVLVEDTCLCFNALKGLPGPYIKWFLEKIGHEGLNNLLMAYEDKSAYASCIFSFSLGPESEPITFVGKTPGKIVLPRGPNDFGWDPIFQPDGFDQTYAEMCKEEKNKISH 177          
BLAST of mRNA_P-wetherbeei_contig11811.1.1 vs. uniprot
Match: A0A3S3R8J2_9MAGN (Inosine triphosphate pyrophosphatase n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A3S3R8J2_9MAGN)

HSP 1 Score: 192 bits (488), Expect = 2.210e-59
Identity = 94/170 (55.29%), Postives = 120/170 (70.59%), Query Frame = 1
Query:    1 ITFVTGNPNKLIEARMIMEAWDDVVPVELRNLPLDLPEIQGCHLEISRAKCRLAAEAAGGAVVVEDTALCFNSLNGMPGPYIKWFVEAVSNEGLYKMLAAHDDKSAYAQCALSFCMGPGHEPFTFVGRADGTIVAPKGDAGFGWDKIMKPHGSDRTFAEMAKEDKNKISH 510
            +TFVTGN  KL E R I+    + VP   ++L LDLPE+QG   EIS+ K RLAA+   G V+VEDT LCFN+LNG+PGPYIKWF++ + +EGL  +L A++DKSAYA C  S  +GP  EP TFVG+  G IV P+G   FGWD + +P G  +T+AEM KE+KNKISH
Sbjct:   12 VTFVTGNAKKLEEVRAIL---GNSVP--FKSLKLDLPELQGEPEEISKEKARLAAKQVNGPVIVEDTCLCFNALNGLPGPYIKWFLQKIGHEGLNNILKAYEDKSAYAMCVFSLALGPNVEPVTFVGKTQGLIVPPRGPGDFGWDPVFQPDGYQQTYAEMPKEEKNKISH 176          
BLAST of mRNA_P-wetherbeei_contig11811.1.1 vs. uniprot
Match: A0A7S0YDA5_9CHLO (Inosine triphosphate pyrophosphatase n=1 Tax=Polytomella parva TaxID=51329 RepID=A0A7S0YDA5_9CHLO)

HSP 1 Score: 191 bits (486), Expect = 3.800e-59
Identity = 93/170 (54.71%), Postives = 121/170 (71.18%), Query Frame = 1
Query:    1 ITFVTGNPNKLIEARMIMEAWDDVVPVELRNLPLDLPEIQGCHLEISRAKCRLAAEAAGGAVVVEDTALCFNSLNGMPGPYIKWFVEAVSNEGLYKMLAAHDDKSAYAQCALSFCMGPGHEPFTFVGRADGTIVAPKGDAGFGWDKIMKPHGSDRTFAEMAKEDKNKISH 510
            + FVTGN  KL E   I+ A    +P  + +  +DLPE+QG   EIS+ KCR+AAE  GGAV+VEDT+LCFN+L+G+PGPYIKWF+E + ++GL KMLA  +DK+AYAQC  ++  GPG EP TFVGR +G IVA +G   FGWD + +P G + T+AEM K  KN ISH
Sbjct:   10 VKFVTGNKKKLEEVIAIL-ASGSTLPFVVESAKIDLPELQGEPDEISKEKCRIAAEKVGGAVMVEDTSLCFNALHGLPGPYIKWFLEKLGHDGLNKMLAGFEDKTAYAQCIFAYSPGPGFEPVTFVGRTEGRIVAGRGPTDFGWDSVFEPLGFEETYAEMPKVTKNLISH 178          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11811.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6S9GJK0_HETAK2.700e-6156.73Inosine triphosphate pyrophosphatase n=1 Tax=Heter... [more]
A0A2R6XAI5_MARPO8.930e-6155.88Inosine triphosphate pyrophosphatase n=1 Tax=March... [more]
R1FN82_EMIHU1.480e-6057.06Inosine triphosphate pyrophosphatase n=2 Tax=Emili... [more]
A0A7S0VHY9_9CRYP2.890e-6054.71Inosine triphosphate pyrophosphatase n=1 Tax=Hemis... [more]
A0A2P2Q4E4_RHIMU2.900e-6058.82Inosine triphosphate pyrophosphatase n=1 Tax=Rhizo... [more]
A0A8B7CQU0_PHODC1.110e-5955.88Inosine triphosphate pyrophosphatase n=2 Tax=Areca... [more]
A0A151Z6V2_9MYCE1.950e-5952.94Inosine triphosphate pyrophosphatase n=1 Tax=Tiegh... [more]
A0A0A0L4S4_CUCSA2.140e-5956.47Inosine triphosphate pyrophosphatase n=8 Tax=Cucur... [more]
A0A3S3R8J2_9MAGN2.210e-5955.29Inosine triphosphate pyrophosphatase n=1 Tax=Cinna... [more]
A0A7S0YDA5_9CHLO3.800e-5954.71Inosine triphosphate pyrophosphatase n=1 Tax=Polyt... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11811contigP-wetherbeei_contig11811:593..2090 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2903.EOD37076
PFAMsHam1p_like
Model size510
Max annot lvl2759|Eukaryota
KEGG rclassRC00002
KEGG koko:K01519
KEGG ReactionR00426,R00720,R01855,R02100,R02720,R03531,R08243
KEGG Pathwayko00230,ko00983,ko01100,map00230,map00983,map01100
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576
Exons4
Evalue2.43e-61
EggNOG OGsCOG0127@1|root,KOG3222@2759|Eukaryota
DescriptionNADH pyrophosphatase activity
Cds size510
COG categoryF
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185927.0331538-CDS-P-wetherbeei_contig11811:592..6281683185927.0331538-CDS-P-wetherbeei_contig11811:592..628Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11811 593..628 +
1683185927.044625-CDS-P-wetherbeei_contig11811:1048..12431683185927.044625-CDS-P-wetherbeei_contig11811:1048..1243Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11811 1049..1243 +
1683185927.057047-CDS-P-wetherbeei_contig11811:1447..15851683185927.057047-CDS-P-wetherbeei_contig11811:1447..1585Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11811 1448..1585 +
1683185927.0643873-CDS-P-wetherbeei_contig11811:1949..20901683185927.0643873-CDS-P-wetherbeei_contig11811:1949..2090Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11811 1950..2090 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11811.1.1prot_P-wetherbeei_contig11811.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig11811 593..2090 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig11811.1.1

>prot_P-wetherbeei_contig11811.1.1 ID=prot_P-wetherbeei_contig11811.1.1|Name=mRNA_P-wetherbeei_contig11811.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=170bp
ITFVTGNPNKLIEARMIMEAWDDVVPVELRNLPLDLPEIQGCHLEISRAK
CRLAAEAAGGAVVVEDTALCFNSLNGMPGPYIKWFVEAVSNEGLYKMLAA
HDDKSAYAQCALSFCMGPGHEPFTFVGRADGTIVAPKGDAGFGWDKIMKP
HGSDRTFAEMAKEDKNKISH
back to top

mRNA from alignment at P-wetherbeei_contig11811:593..2090+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig11811.1.1 ID=mRNA_P-wetherbeei_contig11811.1.1|Name=mRNA_P-wetherbeei_contig11811.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1498bp|location=Sequence derived from alignment at P-wetherbeei_contig11811:593..2090+ (Phaeothamnion wetherbeei SAG_119_79)
ATCACCTTCGTCACTGGGAACCCCAATAAACTAATCGTACGCTGATACCT AGCGAAGATTCTAGGAACAAACGCTTTGCACACTCGGCTTTCGCTCGGTT TAGTAATGTGTGGAAGGGAAATTTTCCTCTGTAACAGTTGGGATTTGTAG AGGACAAATTGTCTTTCTTAATGGCACACTCGTTGATAAGTAACGATGCT TGGCAAAAAAATTAAGTGCAAGCATCGAGTTCATTTTGTCCATCTTGCTT CACGGGTCCTTCTCTCCGCCGCCTCGCACAATCCAAGGGCAAGAGGCCTT CTCACGACTCTAGGCATGGTTCGGTTTCTCAATGCCGTGTAGATCACCGC CGTGTGATCCCCGCGGCCTCAACCAGCGTGCAGTCCAATGGTGCAATCCT CACTAACCGCATCGACCCTTCTTTTTAACCCGCGCGCTCTCCGGCCGCCG GCGCAGGAGGCACGGATGATCATGGAGGCGTGGGACGACGTGGTTCCGGT GGAGCTACGCAACCTGCCGCTGGACCTTCCGGAGATCCAGGGCTGCCACC TCGAGATCTCACGGGCCAAGTGCCGGCTGGCGGCCGAGGCGGCGGGCGGC GCCGTCGTGGTTGAGGACACCGCGCTCTGTTTTAATAGCCTCAATGGCAT GGTGAGTATTGAGCCGGCGGAACGCACAGTAAGAAGGCCTTTTCTAGAGC TGTAGCCGCCTTTCCCCCACACTTCTTCTCATCTAAGTTACTGCCAGTTT ACTGCAGTCCCTTTCTGTTTCAGATCTCACTTTTGTCCAAACCCCTTGGG CCGTTGATCCTATTGCTGCGGGCTCCCTTTGCTTCCGGAAAACCCGATAT GGCAGCCGGGGCCGTACATCAAGTGGTTCGTGGAGGCGGTGAGCAACGAG GGCTTGTACAAAATGCTCGCCGCGCACGACGACAAGTCGGCCTACGCGCA ATGCGCGCTGTCTTTTTGCATGGGGCCCGGCCACGAGCCATTTGTGAGTC TGGCCGACTGTCCGTCCGTCTGTCATTGTTTCTCTCTCGCTCGTACTTTT TTCTCTTGTTCTGCTTTCTATCTGCTCACTTGCTCGTTTTTGATGATATG ATCTCACCTGCTTCCTGTCCGTTTCGATGCTTTTTGTCACACGGCGGTCG CTTGGCGGCTTTGCTGGCATGTTAGCCGCAATAGTTGCCTTTCGAGTGAC ATACCCCCCGCATTCCCTCTTCTTTCTTTCGCACCTGCTTTGCCCCTTTC CCATCCGTTCTTTGCATTCTCTTCGCTTTTCTCCTTTTCACATCTACCCC CTGACACATTTTGTTCTCCTCCGTTTTCTTCCTGGCGGCACGAAACCTTA CTCACAGACATTTGTGGGGCGGGCGGATGGCACCATCGTCGCGCCGAAGG GCGACGCAGGCTTCGGCTGGGACAAAATCATGAAGCCGCACGGCAGCGAC CGGACCTTTGCCGAGATGGCGAAGGAAGACAAAAACAAGATCAGCCAC
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig11811:593..2090+

>mRNA_P-wetherbeei_contig11811.1.1 ID=mRNA_P-wetherbeei_contig11811.1.1|Name=mRNA_P-wetherbeei_contig11811.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=510bp|location=Sequence derived from alignment at P-wetherbeei_contig11811:593..2090+ (Phaeothamnion wetherbeei SAG_119_79)
ATCACCTTCGTCACTGGGAACCCCAATAAACTAATCGAGGCACGGATGAT
CATGGAGGCGTGGGACGACGTGGTTCCGGTGGAGCTACGCAACCTGCCGC
TGGACCTTCCGGAGATCCAGGGCTGCCACCTCGAGATCTCACGGGCCAAG
TGCCGGCTGGCGGCCGAGGCGGCGGGCGGCGCCGTCGTGGTTGAGGACAC
CGCGCTCTGTTTTAATAGCCTCAATGGCATGCCGGGGCCGTACATCAAGT
GGTTCGTGGAGGCGGTGAGCAACGAGGGCTTGTACAAAATGCTCGCCGCG
CACGACGACAAGTCGGCCTACGCGCAATGCGCGCTGTCTTTTTGCATGGG
GCCCGGCCACGAGCCATTTACATTTGTGGGGCGGGCGGATGGCACCATCG
TCGCGCCGAAGGGCGACGCAGGCTTCGGCTGGGACAAAATCATGAAGCCG
CACGGCAGCGACCGGACCTTTGCCGAGATGGCGAAGGAAGACAAAAACAA
GATCAGCCAC
back to top