mRNA_P-wetherbeei_contig1179.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1179.3.1
Unique NamemRNA_P-wetherbeei_contig1179.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1179.3.1 vs. uniprot
Match: A0A6H5JU68_9PHAE (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JU68_9PHAE)

HSP 1 Score: 226 bits (575), Expect = 5.390e-66
Identity = 203/425 (47.76%), Postives = 235/425 (55.29%), Query Frame = 1
Query:   19 SQPDVVLSMDRDSYYSTTLIADGASELLEGLIGSRRAEILGPEVRLVAMALYHGLTTLAGKQTLGQEYCDLLLIGERRKGGADPPFRPLSSVRRLLYVLLNVLLPYLSERAHRGWAGLSEL--------GQTSAQAHHLRMRQAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLR--RLTRPLLLALLGWLRRLHLAAFYLGGAYFTPAMRLAGVRLMHSRALDTGETRARYAVLGLFTAVPLVVEAASAAXXXXXXXXXXXXXXXXXARVPSADDGEAEAAPVLRPCGISTTGTGEVAAVVAAATATASGRP---------RRRCALCMGPREYPAATPCGHLFCWRCIIAWCQTSPECPLCRQPADPQSIVCVYQY 1236
            +QPDVVLS +RD YY+  L+ +G SEL E L+G+RR  IL PE+R +A  LY GLT LAGKQTLGQEYC + L+   R GG +    PLS      Y  L V +PYL ER   GW GL  L          TS  A         A                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     +L   R  RP +  +L W  RLHLAAFY  G +   AMR  G RL ++R  +    R RYAVLGL   +    EAA+A+                 +  P + +GEA       P  +   G G+ A       AT    P         RRRC+LCM  RE  AATPCGHLFCW CI+ WCQT+PECPLCRQP  PQSIVC+YQY
Sbjct:   13 AQPDVVLSQERDLYYANRLLGEGTSELAETLLGARRVMILAPELRALASCLYFGLTNLAGKQTLGQEYCGIDLVPSGRGGGRESS--PLSRRPLQAYTFLRVAVPYLQERMREGWHGLRSLRDPFGSGGAATSLAAXXXXXXXXXAVAPPVGIAVSSVSGGTAAADRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFLRRVLAWARRRRPAMSGVLEWALRLHLAAFYFDGRFANVAMRAVGARLAYARP-EQEAARTRYAVLGLLLLLQAAAEAATASAETAERWRATARAALSES-FPRSTEGEAVCGEGGGPSDLGE-GVGDTALPPRVPAATRGRTPADVALFPPSRRRCSLCMSSRENVAATPCGHLFCWECIVGWCQTNPECPLCRQPVAPQSIVCLYQY 432          
BLAST of mRNA_P-wetherbeei_contig1179.3.1 vs. uniprot
Match: A0A836CLL0_9STRA (Peroxisome biogenesis factor 10 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLL0_9STRA)

HSP 1 Score: 180 bits (456), Expect = 3.840e-49
Identity = 169/404 (41.83%), Postives = 204/404 (50.50%), Query Frame = 1
Query:   43 MDRDSYYSTTLIADGASELLEGLIGSRRAEILGPEVRLVAMALYHGLTTLAGKQTLGQEYCDLLLIGERRKGGADPPFRPLSSVRRLLYVLLNVLLPYLSERAHRGWAGLSELGQT---SAQAHHLR--MRQAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLRRLTRPLLLALLGWLRRLHLAAFYLGGAYFTPAMRLAGVRLMHSRALDTGETRARYAVLGLFTAVPLVVEAASAAXXXXXXXXXXXXXXXXXARVPSADDGEAEAAPVLRPCGISTTGTGEVAAVVAAATATASGRPRRRCALCMGPREYPAATPCGHLFCWRCIIAWCQTSPECPLCRQPADPQSIVCVYQYD 1239
            M+RD+YY   L ADG  ++LE  +G RR  +L  E+ L+A  LY GLT LAG+QT+GQEYCDL+     R G  D P        R  Y L+ V  PYL  R   GW  L ++ +     A+A  +R  MR  AA                                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      R     +L WL   HLA F+L G Y   AMR A VRLM++RA D      RY +LG+        E  + A                        +  ++  P L                  + + T +   R RCALCMGPRE+ AAT CGHLFCW CI+ WC+T+PECPLCRQPA+PQSIVCVY YD
Sbjct:    1 MERDTYYVGAL-ADGLKDVLESCMGVRRTSMLAAELNLLAGTLYQGLTVLAGRQTVGQEYCDLMFS---RNGLCDVPLSA-----RAGYSLVEVCWPYLLSRLDTGWPRLRDIREPFDRHAEAARIRDAMRAHAAESESQQPTSAAEAAAVTPVAPPDNDGSRDAAYSVCSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAR-----VLRWLGAFHLALFFLNGRYANAAMRAARVRLMYNRAQDA--PLPRYTILGVLMLARFGFEFGAQAARKLHGIIFSDGDGSGGXXXXXKANLASQRVPGL------------------SGSDTEAAARRHRCALCMGPREHTAATLCGHLFCWECIVGWCETNPECPLCRQPAEPQSIVCVYHYD 370          
BLAST of mRNA_P-wetherbeei_contig1179.3.1 vs. uniprot
Match: I0Z4I3_COCSC (RING-type domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z4I3_COCSC)

HSP 1 Score: 140 bits (352), Expect = 5.950e-34
Identity = 126/419 (30.07%), Postives = 163/419 (38.90%), Query Frame = 1
Query:    4 MFSAGSQPDVVLSMDRDSYYSTTLIADGASELLEGLIGSRRAEILGPEVRLVAMALYHGLTTLAGKQTLGQEYCDLLLIGERRKGGADPPFRPLSSVRRLLYVLLNVLLPYLSERAHRGWAGLSE--LGQTSAQAHHLRMRQAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLRRLTRPLLLALLGWLR---RLHLAAFYLGGAYFTPAMRLAGVRLMHSRALDTGETRARYAVLGLFTAVPLVVEAASAAXXXXXXXXXXXXXXXXXARVPSADDGEAEAAPVLRPCGISTTGTGEVAAVVAAATATASGR--PRRRCALCMGPREYPAATPCGHLFCWRCIIAWCQTSPECPLCRQPADPQSIVCVYQYD 1239
            +F   +QPD+V +  +D  Y   L  D   + +  L+G R+A     EV+LVA  LY GLTT  G QTLG+EYCD++ +       A P     S  RR L VLL  + PYL+E       G ++  LG +SA+          +                                                                               RP    L  +     RLHLA FY  G Y+  A R  G R +    L   E R  Y +LG+   V L + A S A                 A V +       AA VL+  G      GE+A + A ATA   G   P ++CALC+G R  P ATPCGH+FCW+CI  W    PECPLCR P     +VCVY  D
Sbjct:   25 LFPVAAQPDIVRAAQKDESYLQHL-TDACHDAVRRLLGPRQALKYSREVKLVAELLYAGLTTGVGLQTLGEEYCDIIQV-------AGPVGVAPSVARRTLLVLLEKMAPYLAEHLSHAAIGGTDGALGTSSAETPRFATDSPPSREDPRPSGASAEGEGSWNRVGAWAAAARQEAVSIAFKW-----------------------------------------RPAWAVLASYAPVAVRLHLALFYFYGVYYHWAKRATGTRYIFVGKLF--ERRPSYHLLGVLLFVQLGISAGSWALSNLTASLGQTAGLDRNADVGAHTSKAMRAAVVLQDFG-----DGEMAPMEAMATAGDVGEVPPHKKCALCLGARTSPTATPCGHVFCWQCIADWHNQKPECPLCRSPFTTSGLVCVYNSD 387          
BLAST of mRNA_P-wetherbeei_contig1179.3.1 vs. uniprot
Match: UPI00053F43F9 (peroxisome biogenesis factor 10 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F43F9)

HSP 1 Score: 136 bits (343), Expect = 1.270e-32
Identity = 106/411 (25.79%), Postives = 167/411 (40.63%), Query Frame = 1
Query:    7 FSAGSQPDVVLSMDRDSYYSTTLIADGASELLEGLIGSRRAEILGPEVRLVAMALYHGLTTLAGKQTLGQEYCDLLLIGERRKGGADPPFRPLSSVRRLLYVLLNVLLPYLSERAHRGWAGLSELGQTSAQAHHLRMRQAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLRRLTRPLLLALLGWLRRLHLAAFYLGGAYFTPAMRLAGVRLMHSRALDTGETRARYAVLGLFTAVPLVVEAASAAXXXXXXXXXXXXXXXXXARVPSADDGEAEAAPVLRPCGISTTGTGEVAAVVAAATATASGRPRRRCALCMGPREYPAATPCGHLFCWRCIIAWCQTSPECPLCRQPADPQSIVCVYQYD 1239
            F A +QP+++ + ++D +Y++  ++D   +    L G+R       + +L+   LY+ LTT AG+QTLG+EYCD++ I     G    P  P    RR LY+L    +PY++ER     + ++  G   A++H      +++                                                                                P+   +L  + R +L  FY  G Y+  + R +G+R M          R RY +LG+F  + L V AA A                  A + +         PVL   G   T   +  + ++ +T +A  +   +C LC+G RE+P ATPCGH+FCW CI+ WC   PECPLCR P    S+VC+Y  D
Sbjct:   36 FPAAAQPEIMRAAEKDDHYAS-FVSDACRDAFRHLFGARLTVAYHSQTKLLGQMLYYILTTGAGQQTLGEEYCDIVQIA----GSYGLPPTP---ARRALYILYQTAVPYIAERMS---SRIASRGMFLAESHSDEFGDSSSPRNSQLGSGTPSSSTSQISTSSLARLKGRFRRLRMYIIHQWPTVL-----------------------------------PVAREILQLILRTNLMLFYFEGLYYHISKRTSGIRYMFIG--KPSNQRPRYQILGVFLLIQLCVIAAEALRRTNLSTLGSSTRL---ASLGTYQHSAGTGLPVLNEEGDLITSDSDKVSFLSEST-SAEAKGATKCTLCLGNREHPTATPCGHVFCWNCIMEWCNEKPECPLCRTPLTHSSLVCLYHSD 394          
BLAST of mRNA_P-wetherbeei_contig1179.3.1 vs. uniprot
Match: A0A8J9WLS6_9CHLO (Peroxisome biogenesis factor 10 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WLS6_9CHLO)

HSP 1 Score: 130 bits (327), Expect = 1.920e-30
Identity = 125/420 (29.76%), Postives = 160/420 (38.10%), Query Frame = 1
Query:    4 MFSAGSQPDVVLSMDRDSYYSTTLIADGASELLEGLIGSRRAEILGPEVRLVAMALYHGLTTLAGKQTLGQEYCDLLLIGERRKGGADPPFRPLSSVRRLLYVLLNVLLPYLSER-AHRGWAGLSELGQTSA-QAHHLRMRQAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLRRLTRPLLLALLGWLR---RLHLAAFYLGGAYFTPAMRLAGVRLMHSRALDTGETRARYAVLGLFTAVPLVVEAASAAXXXXXXXXXXXXXXXXXARVPSADDGEAEAAPVLRPCGISTTGTGEVAAVVAAATATASGRP---RRRCALCMGPREYPAATPCGHLFCWRCIIAWCQTSPECPLCRQPADPQSIVCVYQYD 1239
            +F   +QPD+V +  +D  Y   L  D   + +  L+G R+A     EV+LVA  LY GLTT AG QTLG+EYCD++ +       A P     S  RR L VLL  + PYL+E  +    AG       SA Q H  R      A                                                                              RP    L  +     RLHLA FY  G Y+  A R  G R +    L   E R  Y +LG+   V L + A S A                   V +       AA VL+  G       E AA++   T+TA        ++CALC+G R +P ATPCGH+FCW+CI  W     ECPLCR P     +VCVY  D
Sbjct:   25 LFPVAAQPDIVRAAQKDESYLQHL-TDACHDAVRRLLGPRQALKYSREVKLVAELLYAGLTTGAGLQTLGEEYCDIIQV-------AGPIGVAPSVARRTLLVLLERMAPYLAEHLSQAATAGTDGDSAASANQPHFARETPQEDASLASPSSGGEGSWNRVGAWAAAARSEAVSIASKW--------------------------------------------RPAWAVLASYAPVAVRLHLALFYFYGVYYHWAKRATGTRYIFVGKLY--ERRPSYHLLGVLLFVQLGISAGSWALSNLTASLGHPAPLDRNTDVGAHTSKALRAAVVLQDFG------NEEAALLQEVTSTADVGEVPQHKKCALCLGARTFPTATPCGHVFCWQCIADWHNQKAECPLCRSPFTTSGLVCVYNSD 384          
BLAST of mRNA_P-wetherbeei_contig1179.3.1 vs. uniprot
Match: A0A0K9R3E7_SPIOL (RING-type domain-containing protein n=1 Tax=Spinacia oleracea TaxID=3562 RepID=A0A0K9R3E7_SPIOL)

HSP 1 Score: 129 bits (325), Expect = 3.740e-30
Identity = 108/411 (26.28%), Postives = 162/411 (39.42%), Query Frame = 1
Query:    7 FSAGSQPDVVLSMDRDSYYSTTLIADGASELLEGLIGSRRAEILGPEVRLVAMALYHGLTTLAGKQTLGQEYCDLLLIGERRKGGADPPFRPLSSVRRLLYVLLNVLLPYLSERAHRGWAGLSELGQTSAQAHHLRMRQAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLRRLTRPLLLALLGWLRRLHLAAFYLGGAYFTPAMRLAGVRLMHSRALDTGETRARYAVLGLFTAVPLVVEAASAAXXXXXXXXXXXXXXXXXARVPSADDGEAEAAPVLRPCGISTTGTGEVAAVVAAATATASGRPRRRCALCMGPREYPAATPCGHLFCWRCIIAWCQTSPECPLCRQPADPQSIVCVYQYD 1239
            F A +QP+V+ + ++D  Y++  ++D   +    L G+R A     E +L+   LY+ LTT AG+QTLG+EYCDL+ I     G    P  P    RR L++L    +PY++ER     + ++  G   A++H   +  +                                                                                  P+   +L    R +L  FY  G Y+  + R +G+R M          R RY +LG+F  + L V AA                    A + +  +       VL   G       E A  +  +T++   +   +C LC+G REYP ATPCGH+FCW CI+ WC   PECPLCR P    S+VC+Y  D
Sbjct:   27 FQAAAQPEVMRAAEKDDQYAS-FVSDACRDAFRHLFGARIAVAYHSETKLLGQMLYYILTTGAGQQTLGEEYCDLVQIA----GSYGLPPTP---ARRALFILYQTAVPYIAERTS---SRIASRGMFLAESHSDDLSVSNTPWNSQLGSETPSSSTSQVSNSPFSRLKERFRRLRLYLIQQWPTML-----------------------------------PVAREVLQLFLRTNLMLFYFEGLYYHFSKRASGIRYMFIG--KPSNQRPRYQILGVFLLIQLCVIAAE---RLRHTNLSAIGSSAGQASLGTYQNSAGRGTLVLNEEGDLINADSEKANFLVESTSSEV-KGASKCTLCLGNREYPTATPCGHVFCWNCIMEWCNEKPECPLCRTPLTHSSLVCLYHSD 385          
BLAST of mRNA_P-wetherbeei_contig1179.3.1 vs. uniprot
Match: A0A803LB50_CHEQI (RING-type domain-containing protein n=5 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803LB50_CHEQI)

HSP 1 Score: 127 bits (318), Expect = 2.150e-29
Identity = 108/412 (26.21%), Postives = 164/412 (39.81%), Query Frame = 1
Query:    7 FSAGSQPDVVLSMDRDSYYSTTLIADGASELLEGLIGSRRAEILGPEVRLVAMALYHGLTTLAGKQTLGQEYCDLLLIGERRKGGADPPFRPLSSVRRLLYVLLNVLLPYLSERAHRGWAGLSELGQTSAQAHHLRMRQAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLRRLTRPLLLALLGWLRRLHLAAFYLGGAYFTPAMRLAGVRLMHSRALDTGETRARYAVLGLFTAVPL-VVEAASAAXXXXXXXXXXXXXXXXXARVPSADDGEAEAAPVLRPCGISTTGTGEVAAVVAAATATASGRPRRRCALCMGPREYPAATPCGHLFCWRCIIAWCQTSPECPLCRQPADPQSIVCVYQYD 1239
            F A +QP+++ + ++D +Y++  ++D   +    L G+R A     E +L+   LY+ LTT AG+QTLG+EYCD+  I     G    P  P    RR L++L    +PY++ER     + ++  G    ++H      + A                                                                                P+   +L    R +L  FY  G Y+  + R +G+R M          R RY +LG+F  + L V+ AA                        SA  G     PVL   G   T   E A  +A ++++ + +   +C LC+G  E+P ATPCGH+FCW CI+ WC   PECPLCR P    S+VC+Y  D
Sbjct:   24 FPAAAQPEIMRAAEKDDHYAS-FVSDACRDAFRHLFGARIAVAYHSETKLLGQMLYYILTTGAGQQTLGEEYCDIAQIA----GSYGLPPTP---ARRALFILYQTAVPYIAERTS---SRIASRGMFLTESHSDDFSVSNAPLNSQTGSETPTSSTSQVL-------------------------------------------------------------PVAREVLQLFLRTNLMLFYFEGLYYHISKRASGIRYMFIG--KPSNQRPRYQILGVFLLIQLCVIAAARLRQTNLSSLGGPSSQMSFGPYQQSAGRG----VPVLNEEGDLITAESERANFLAESSSSEA-KGASKCTLCLGNCEHPTATPCGHVFCWNCIMEWCNEKPECPLCRTPLTHSSLVCLYHSD 356          
BLAST of mRNA_P-wetherbeei_contig1179.3.1 vs. uniprot
Match: A0A7C8Z6D7_OPUST (RING-type domain-containing protein n=2 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C8Z6D7_OPUST)

HSP 1 Score: 127 bits (320), Expect = 2.210e-29
Identity = 106/416 (25.48%), Postives = 163/416 (39.18%), Query Frame = 1
Query:    7 FSAGSQPDVVLSMDRDSYYSTTLIADGASELLEGLIGSRRAEILGPEVRLVAMALYHGLTTLAGKQTLGQEYCDLLLIGERRKGGADPPFRPLSSVRRLLYVLLNVLLPYLSER-----AHRGWAGLSELGQTSAQAHHLRMRQAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLRRLTRPLLLALLGWLRRLHLAAFYLGGAYFTPAMRLAGVRLMHSRALDTGETRARYAVLGLFTAVPLVVEAASAAXXXXXXXXXXXXXXXXXARVPSADDGEAEAAPVLRPCGISTTGTGEVAAVVAAATATASGRPRRRCALCMGPREYPAATPCGHLFCWRCIIAWCQTSPECPLCRQPADPQSIVCVYQYD 1239
            F   +QP+++ + ++D +Y++  +++   +    L G+R A     E +L+   LY+ LTT AG+QTLG+EYCD++ +       A P   P +  RR+L+VL +  +PYL+ER     A RG       G  S  +     +Q   +                                                                               P+   +L  + R +L  FY  G Y+  + R AG+R M      T + R RY +LG+F  + L V AA                        +    E    P+L   G   T   +       +T+ +  +   +C LC+  R +P ATPCGH+FCW CI+ WC   PECPLCR P    S+VC+Y  D
Sbjct:   37 FLFAAQPEIMRAAEKDDHYAS-FVSEACRDAFRHLFGARIALAYHNETKLLGQMLYYILTTGAGQQTLGEEYCDIVQV-------AGPNGLPPTPARRVLFVLYHTTVPYLAERMSSRLASRGIILAESPGNISDDSAPWNSQQGTESPSSSSSQTSSSALSRLKEKYRRLRSYITQQWPTLL--------------------------------------------PVAREILQLILRANLMFFYFEGLYYHISKRTAGIRYMFI-GKQTNQ-RPRYQILGVFLLIQLCVIAAEGLRRRNLSSLGTSARPTSLG---TYQQSEGRGLPILDEEGDLITTHSDKGGFPVESTSYSEVKGGSKCTLCLSNRLHPTATPCGHVFCWNCIMEWCNEKPECPLCRTPLTHSSLVCLYHSD 395          
BLAST of mRNA_P-wetherbeei_contig1179.3.1 vs. uniprot
Match: A0A2D4CDT0_PYTIN (RING-type domain-containing protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CDT0_PYTIN)

HSP 1 Score: 126 bits (316), Expect = 4.590e-29
Identity = 122/415 (29.40%), Postives = 168/415 (40.48%), Query Frame = 1
Query:   10 SAGSQPDVVLSMDRDSYYSTTLIADGASELLEGLIGSRRAEILGPEVRLVAMALYHGLTTLAGKQ---TLGQEYCDLLLIGERRKGGADPPFRPLSSVRRLLYVLLNVLLPYLSERAHRGWAGLSELGQTSAQ--AHHLRMRQAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLRRLTRPLLLALLGWLRRLHLAAFYLGGAYFTPAMRLAGVRLMHSRALDTGETRARYAVLGLFTAVPLVVEAASAAXXXXXXXXXXXXXXXXXARVPSADDGEAEAAPVLRPCGISTTGTGEVAAVVAAATATASGRPRRRCALCMGPREYPAATPCGHLFCWRCIIAWCQTSP-ECPLCRQPADPQSIVCVYQY 1236
            SAGS  +++L+  +D+ Y +  + +   +LLE  +G      L PE+   +  LY  L TL  KQ   TLG+E+CD+L +     GG     R +   R LL+V L VL  YLS R+  GW  LS+L  +  +  A  LR RQ A+A                                                                                 L  LL W+ +LHLA FY+   +     RLA +  +  R+ D  +     ++LG   +V L+  AA                     R   A     E+ P    C  +   T   AA   A   TA+G  +R+CALC+G R  PA TPCGH+FCW CI+ WCQ +  ECPLCRQ   PQ I C+Y Y
Sbjct:    7 SAGSCAELLLAEKKDAVYESE-VKNLLRDLLERCVGPHVLSQLLPELSAASTLLYL-LVTLGRKQPQQTLGEEFCDVLRV--THDGGNA---RAVGRSRHLLWVALAVLPTYLSARSRMGWHRLSQLTTSPRERMAQQLRERQQASANATNAATTARPATRSPLQLLDRLVAVVREALETLQQRIVPSSYEFA-----------------------------------LSPLLSWIAQLHLARFYVSTRFLDITKRLASIEYVFVRS-DV-QPALNLSLLGYLMSVRLLSTAAM------------ELKRFAKLRRQEAKQRLGESLPEGSYCQPTRVPT---AASAPALVPTAAGAKKRKCALCLGERVSPATTPCGHVFCWECIVGWCQKNKTECPLCRQETHPQQIKCIYNY 362          
BLAST of mRNA_P-wetherbeei_contig1179.3.1 vs. uniprot
Match: A0A1S8VNT6_9FUNG (RING-type domain-containing protein n=1 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8VNT6_9FUNG)

HSP 1 Score: 124 bits (310), Expect = 1.730e-28
Identity = 106/402 (26.37%), Postives = 159/402 (39.55%), Query Frame = 1
Query:   13 AGSQPDVVLSMDRDSYYSTTLIADGASELLEGLIGSRRAEILGPEVRLVAMALYHGLTTLAGKQTLGQEYCDLLLIGERRKGGADPPFRPLSSVRRLLYVLLNVLLPYLSERAHRGWAGLSELGQTSAQAHHLRMRQAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLRRLTRPLLLALLGWLRRLHLAAFYLGGAYFTPAMRLAGVRLMHSRALDTGETRARYAVLGLFTAVPLVVEAASAAXXXXXXXXXXXXXXXXXARVPSADDGEAEAAPVLRPCGISTTGTGEVAAVVAAATATASGRPRRRCALCMGPREYPAATPCGHLFCWRCIIAWCQTSPECPLCRQPADPQSI 1218
            A S PD++ +  +D++Y   L     ++++  + GSR       EVRL + ALY+GLT L+G QTLG+EYCD+L + +R          P    RR +++LL VL PY+ ERA      +  L ++        +RQ + +                                                                         ++R    L  A+ G +  LH+A+FY+ G Y+  A RL+G++ +  R L  GE    Y VLG      L+++A                     A     DD   +           T+   EV+               ++C LC+G R+   ATPCGHLFCW+CI  WC+  PECPLCRQ  D   +
Sbjct:   46 AASPPDIIRATQKDTFYMYQL-QTAIADIIGDIWGSRSQSKYTSEVRLASEALYYGLTMLSGPQTLGEEYCDMLQVTDRV---------PALFKRRFIFLLLQVLGPYIMERA------IQRLKKSETDGS---LRQISPS-------------------------------------------------------------------------MKRTLVRLGKAITGPMASLHMASFYIFGTYYQVAKRLSGIQYVLLRRLRVGEQGLGYEVLGFLIYTQLIIQAVH-------HWYGHLFGTSISAGQVEYDDSHLD-----------TSDHHEVSQ-------------SQKCTLCLGLRKTTTATPCGHLFCWKCISEWCRNKPECPLCRQFVDHNQL 324          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1179.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JU68_9PHAE5.390e-6647.76RING-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A836CLL0_9STRA3.840e-4941.83Peroxisome biogenesis factor 10 n=1 Tax=Tribonema ... [more]
I0Z4I3_COCSC5.950e-3430.07RING-type domain-containing protein n=1 Tax=Coccom... [more]
UPI00053F43F91.270e-3225.79peroxisome biogenesis factor 10 n=1 Tax=Beta vulga... [more]
A0A8J9WLS6_9CHLO1.920e-3029.76Peroxisome biogenesis factor 10 n=1 Tax=Coccomyxa ... [more]
A0A0K9R3E7_SPIOL3.740e-3026.28RING-type domain-containing protein n=1 Tax=Spinac... [more]
A0A803LB50_CHEQI2.150e-2926.21RING-type domain-containing protein n=5 Tax=Chenop... [more]
A0A7C8Z6D7_OPUST2.210e-2925.48RING-type domain-containing protein n=2 Tax=Opunti... [more]
A0A2D4CDT0_PYTIN4.590e-2929.40RING-type domain-containing protein n=2 Tax=Pythiu... [more]
A0A1S8VNT6_9FUNG1.730e-2826.37RING-type domain-containing protein n=1 Tax=Batrac... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1179contigP-wetherbeei_contig1179:3039..4589 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LAW2
Preferred namePEX10
PFAMsPex2_Pex12,zf-C3HC4_2,zf-C3HC4_3,zf-RING_2
Model size1242
Max annot lvl2759|Eukaryota
KEGG koko:K13346
KEGG TC3.A.20.1
KEGG Pathwayko04146,map04146
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000038,GO:0000209,GO:0000280,GO:0000910,GO:0003006,GO:0003674,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0005778,GO:0005779,GO:0005829,GO:0006082,GO:0006464,GO:0006513,GO:0006605,GO:0006625,GO:0006629,GO:0006631,GO:0006635,GO:0006807,GO:0006810,GO:0006886,GO:0006996,GO:0007031,GO:0007049,GO:0007112,GO:0007140,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007285,GO:0007286,GO:0008022,GO:0008104,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009062,GO:0009790,GO:0009791,GO:0009793,GO:0009853,GO:0009987,GO:0010154,GO:0010381,GO:0015031,GO:0015833,GO:0015919,GO:0016020,GO:0016021,GO:0016042,GO:0016043,GO:0016049,GO:0016054,GO:0016558,GO:0016567,GO:0016740,GO:0017038,GO:0019395,GO:0019538,GO:0019752,GO:0019787,GO:0019953,GO:0022402,GO:0022406,GO:0022412,GO:0022414,GO:0030154,GO:0030258,GO:0031090,GO:0031224,GO:0031231,GO:0031300,GO:0031301,GO:0031903,GO:0032446,GO:0032501,GO:0032502,GO:0032504,GO:0032787,GO:0032991,GO:0033036,GO:0033206,GO:0033365,GO:0034440,GO:0034613,GO:0036211,GO:0040007,GO:0042579,GO:0042760,GO:0042886,GO:0043094,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043436,GO:0043574,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044260,GO:0044267,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044425,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044743,GO:0045184,GO:0046395,GO:0046872,GO:0046907,GO:0046914,GO:0048137,GO:0048232,GO:0048285,GO:0048316,GO:0048468,GO:0048515,GO:0048588,GO:0048589,GO:0048608,GO:0048609,GO:0048731,GO:0048856,GO:0048869,GO:0051179,GO:0051234,GO:0051301,GO:0051321,GO:0051640,GO:0051641,GO:0051649,GO:0051704,GO:0055085,GO:0055114,GO:0061458,GO:0061640,GO:0065002,GO:0070647,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071806,GO:0071840,GO:0072329,GO:0072594,GO:0072662,GO:0072663,GO:0098588,GO:0098805,GO:0140013,GO:0140056,GO:0140096,GO:1901564,GO:1901575,GO:1903046,GO:1990351,GO:1990415,GO:1990429
Exons4
Evalue6.46e-66
EggNOG OGsCOG5574@1|root,KOG0317@2759|Eukaryota
Ec32 ortholog descriptionZinc finger, RING/FYVE/PHD-type
Ec32 orthologEc-27_006210.1
Descriptionperoxisome-chloroplast membrane tethering
Cds size1239
COG categoryO
BRITEko00000,ko00001,ko04121
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185926.07306-UTR-P-wetherbeei_contig1179:3038..30411683185926.07306-UTR-P-wetherbeei_contig1179:3038..3041Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1179 3039..3041 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185926.0836065-CDS-P-wetherbeei_contig1179:3041..33031683185926.0836065-CDS-P-wetherbeei_contig1179:3041..3303Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1179 3042..3303 +
1683185926.094589-CDS-P-wetherbeei_contig1179:3411..37021683185926.094589-CDS-P-wetherbeei_contig1179:3411..3702Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1179 3412..3702 +
1683185926.1044378-CDS-P-wetherbeei_contig1179:3798..41241683185926.1044378-CDS-P-wetherbeei_contig1179:3798..4124Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1179 3799..4124 +
1683185926.1158812-CDS-P-wetherbeei_contig1179:4229..45891683185926.1158812-CDS-P-wetherbeei_contig1179:4229..4589Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1179 4230..4589 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1179.3.1prot_P-wetherbeei_contig1179.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1179 3042..4589 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1179.3.1

>prot_P-wetherbeei_contig1179.3.1 ID=prot_P-wetherbeei_contig1179.3.1|Name=mRNA_P-wetherbeei_contig1179.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=413bp
MFSAGSQPDVVLSMDRDSYYSTTLIADGASELLEGLIGSRRAEILGPEVR
LVAMALYHGLTTLAGKQTLGQEYCDLLLIGERRKGGADPPFRPLSSVRRL
LYVLLNVLLPYLSERAHRGWAGLSELGQTSAQAHHLRMRQAAAAAARSGN
RGGDGGGDGGGGGRATPAAVAVAVTAASQDEAPAATAWAAARVAAAAPLP
ASTSAAGSAAVSAAAALLRRLTRPLLLALLGWLRRLHLAAFYLGGAYFTP
AMRLAGVRLMHSRALDTGETRARYAVLGLFTAVPLVVEAASAAGAASASA
AARAAEAAVAARVPSADDGEAEAAPVLRPCGISTTGTGEVAAVVAAATAT
ASGRPRRRCALCMGPREYPAATPCGHLFCWRCIIAWCQTSPECPLCRQPA
DPQSIVCVYQYD*
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mRNA from alignment at P-wetherbeei_contig1179:3039..4589+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1179.3.1 ID=mRNA_P-wetherbeei_contig1179.3.1|Name=mRNA_P-wetherbeei_contig1179.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1551bp|location=Sequence derived from alignment at P-wetherbeei_contig1179:3039..4589+ (Phaeothamnion wetherbeei SAG_119_79)
CCGATGTTCTCGGCGGGATCGCAGCCCGACGTGGTGCTCTCCATGGACCG TGACTCGTACTACTCGACAACTCTAATTGCCGACGGCGCCTCAGAGCTAC TGGAGGGCCTCATCGGCTCGCGCCGAGCTGAAATCCTTGGGCCGGAGGTA CGACTCGTGGCTATGGCCCTCTACCACGGCCTTACGACCCTCGCGGGGAA GCAGACGCTCGGGCAAGAGTACTGCGATTTGCTCCTCATCGGCGAGCGCC GGAAAGGCGGCGCCGGTGGCAGCGCCAAGGAGAGCAGACTTATTTCGGCG TCCAGGCTAGCGGAAGCTTCCTCGGCGAAGCCACAGCAGCAGGCACCAAC CGCGCTGCCAATGCCCTTGTCAGATCCGCCGTTCCGACCGCTCTCTTCGG TCCGACGGCTGCTCTACGTTCTTTTGAATGTGCTCCTGCCGTACCTGTCG GAGAGGGCGCACCGTGGCTGGGCCGGCCTGTCCGAGCTCGGCCAGACGAG CGCCCAAGCCCACCATCTCCGGATGCGGCAGGCCGCCGCCGCCGCTGCCA GAAGTGGCAACCGCGGTGGCGACGGCGGCGGCGATGGCGGTGGCGGCGGC CGCGCTACGCCCGCGGCAGTGGCAGTCGCAGTGACAGCAGCGTCTCAAGA TGAAGCTCCTGCGGGTGAAGCCGCCGCCGTTTTACCGAGGCAGACTTTGG TACGCTTGCTGGCGCGTTTTGCCGAATGGACCGCCGCGCTGGCGGCGTGG GTCGCCCGAGCCACGGCCTGGGCCGCCGCGCGCGTGGCTGCAGCCGCGCC GTTGCCGGCTTCAACTTCCGCAGCGGGTTCGGCGGCAGTTTCGGCGGCAG CGGCGCTGTTGCGGCGCCTCACGCGGCCGCTGCTCCTCGCGCTCCTCGGC TGGCTGCGGCGGTTGCACCTGGCCGCCTTCTACCTCGGCGGCGCCTACTT CACGCCCGCCATGCGGTTGGCAGGCGTGCGGCTGATGCACAGCCGGGCGC TCGACACCGGCGAGACGCGCGCGCGCTACGCCGTTTTGGGTCTCTTTACC GCCGTTCCGCTGGTGGTCGAGGCAGCGTCGGCGGCGGTCGCCGCTTGCCG CGCGGTGGCGACAGCGGCGGCGGGGGGGGGCGGTGGCAGCGGCTGGAGCG AGGATGGCGGGAGCGATAAGGTCGGCAGCAGTGGTTCCGAGGGAGCGGCA TCAGCGTCAGCGGCGGCGCGGGCGGCGGAAGCGGCGGTGGCCGCCCGTGT GCCGAGCGCGGACGACGGAGAAGCAGAAGCTGCACCAGTTTTGCGGCCCT GCGGCATCTCGACGACGGGGACGGGCGAAGTGGCGGCGGTGGTGGCGGCG GCGACGGCGACGGCAAGTGGACGGCCGCGACGGCGCTGCGCGCTGTGCAT GGGCCCGCGGGAGTACCCGGCTGCGACGCCGTGCGGGCACCTCTTTTGCT GGCGGTGCATCATCGCGTGGTGTCAGACGTCGCCGGAGTGCCCGCTTTGC CGGCAGCCGGCGGACCCGCAGTCCATCGTCTGCGTCTACCAGTACGACTG A
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1179:3039..4589+

>mRNA_P-wetherbeei_contig1179.3.1 ID=mRNA_P-wetherbeei_contig1179.3.1|Name=mRNA_P-wetherbeei_contig1179.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1239bp|location=Sequence derived from alignment at P-wetherbeei_contig1179:3039..4589+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTTCTCGGCGGGATCGCAGCCCGACGTGGTGCTCTCCATGGACCGTGA
CTCGTACTACTCGACAACTCTAATTGCCGACGGCGCCTCAGAGCTACTGG
AGGGCCTCATCGGCTCGCGCCGAGCTGAAATCCTTGGGCCGGAGGTACGA
CTCGTGGCTATGGCCCTCTACCACGGCCTTACGACCCTCGCGGGGAAGCA
GACGCTCGGGCAAGAGTACTGCGATTTGCTCCTCATCGGCGAGCGCCGGA
AAGGCGGCGCCGATCCGCCGTTCCGACCGCTCTCTTCGGTCCGACGGCTG
CTCTACGTTCTTTTGAATGTGCTCCTGCCGTACCTGTCGGAGAGGGCGCA
CCGTGGCTGGGCCGGCCTGTCCGAGCTCGGCCAGACGAGCGCCCAAGCCC
ACCATCTCCGGATGCGGCAGGCCGCCGCCGCCGCTGCCAGAAGTGGCAAC
CGCGGTGGCGACGGCGGCGGCGATGGCGGTGGCGGCGGCCGCGCTACGCC
CGCGGCAGTGGCAGTCGCAGTGACAGCAGCGTCTCAAGATGAAGCTCCTG
CGGCCACGGCCTGGGCCGCCGCGCGCGTGGCTGCAGCCGCGCCGTTGCCG
GCTTCAACTTCCGCAGCGGGTTCGGCGGCAGTTTCGGCGGCAGCGGCGCT
GTTGCGGCGCCTCACGCGGCCGCTGCTCCTCGCGCTCCTCGGCTGGCTGC
GGCGGTTGCACCTGGCCGCCTTCTACCTCGGCGGCGCCTACTTCACGCCC
GCCATGCGGTTGGCAGGCGTGCGGCTGATGCACAGCCGGGCGCTCGACAC
CGGCGAGACGCGCGCGCGCTACGCCGTTTTGGGTCTCTTTACCGCCGTTC
CGCTGGTGGTCGAGGCAGCGTCGGCGGCGGGAGCGGCATCAGCGTCAGCG
GCGGCGCGGGCGGCGGAAGCGGCGGTGGCCGCCCGTGTGCCGAGCGCGGA
CGACGGAGAAGCAGAAGCTGCACCAGTTTTGCGGCCCTGCGGCATCTCGA
CGACGGGGACGGGCGAAGTGGCGGCGGTGGTGGCGGCGGCGACGGCGACG
GCAAGTGGACGGCCGCGACGGCGCTGCGCGCTGTGCATGGGCCCGCGGGA
GTACCCGGCTGCGACGCCGTGCGGGCACCTCTTTTGCTGGCGGTGCATCA
TCGCGTGGTGTCAGACGTCGCCGGAGTGCCCGCTTTGCCGGCAGCCGGCG
GACCCGCAGTCCATCGTCTGCGTCTACCAGTACGACTGA
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