mRNA_P-wetherbeei_contig11737.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig11737.2.1
Unique NamemRNA_P-wetherbeei_contig11737.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig11737.2.1 vs. uniprot
Match: A0A6H5JD41_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JD41_9PHAE)

HSP 1 Score: 258 bits (659), Expect = 8.840e-81
Identity = 118/206 (57.28%), Postives = 148/206 (71.84%), Query Frame = 1
Query:    1 RLLEGGGQPYVPIKTTWRLNERHYGALQGKSKAETEAQLGPIVREWRRSFSARPPPMEPNHPHWPLIADDPRYRGVDIPRCESLDDTVRRVWSYWEGEICRDLGAGKSVLVMAHANTIRSLVKVLDDVSEEKIKAVKIPTGRPFVYRLGPDFRPVGEPDANGFRGKFISDLMTAGAAVCVGDLEWRLGRCEELMRENPLVVPEDCY 618
            RLL+G GQPYVP+KT+WRLNERHYGALQG++KA  E  +G +V EWRR++  RPPPM   HPHWPLI+ D RY+G+ +P+ ESL DT  RV  YWE +I  D+ AGK V+V+AHANT+RSLVK LDDV E+ I+ V IPTG PFVY    D +P+GEPD +GFRG+F+ DLM    A  V + + R   C     ENP  VPE+C+
Sbjct:  184 RLLDGCGQPYVPVKTSWRLNERHYGALQGRNKATLEEAMGEVVIEWRRAYGVRPPPMTDTHPHWPLISLDSRYQGLKVPQSESLRDTANRVMEYWESDIVPDIRAGKRVIVVAHANTLRSLVKRLDDVEEDAIRNVNIPTGEPFVYDFDADLKPIGEPDKHGFRGRFVGDLMAEKDAA-VNEYKRREEACHTKWEENPEAVPEECW 388          
BLAST of mRNA_P-wetherbeei_contig11737.2.1 vs. uniprot
Match: A0A836CDH1_9STRA (Histidine phosphatase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDH1_9STRA)

HSP 1 Score: 237 bits (605), Expect = 1.530e-75
Identity = 106/172 (61.63%), Postives = 132/172 (76.74%), Query Frame = 1
Query:    1 RLLEGGGQPYVPIKTTWRLNERHYGALQGKSKAETEAQLGPIVREWRRSFSARPPPMEPNHPHWPLIADDPRYRGVDIPRCESLDDTVRRVWSYWEGEICRDLGAGKSVLVMAHANTIRSLVKVLDDVSEEKIKAVKIPTGRPFVYRLGPDFRPVGEPDANGFRGKFISDLM 516
            R+LEG  QP+VPIKT+W LNERHYGALQG++KA TE +LGPIV EWRR ++  PPPME +HPHW LI  D RY GVDIP  ESL DT +RV  YW  E+  D+ AGK VLV+AHANT+R+LV  LD + +E IK +KIPTGRPF+Y+L  + +PVGE D +GFRG+++  LM
Sbjct:   80 RMLEGAAQPWVPIKTSWMLNERHYGALQGQNKAATEQRLGPIVHEWRRGYAVAPPPMEESHPHWTLIQQDARYAGVDIPLSESLRDTAQRVLKYWRAEVVPDVLAGKKVLVVAHANTLRALVHALDGIDDEAIKGLKIPTGRPFIYKLDANLQPVGEVDRHGFRGRYVDTLM 251          
BLAST of mRNA_P-wetherbeei_contig11737.2.1 vs. uniprot
Match: A0A7S2UY13_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UY13_9STRA)

HSP 1 Score: 204 bits (520), Expect = 4.870e-61
Identity = 103/213 (48.36%), Postives = 139/213 (65.26%), Query Frame = 1
Query:    1 RLLEGGGQPYVPIKTTWRLNERHYGALQGKSKAETEAQLGPIVREWRRSFSARPPPMEPNHPHWPLIADDPRYRGVDIPRCESLDDTVRRVWSYWEGEICRDLGAGKSVLVMAHANTIRSLVKVLDDVSEEKIKAVKIPTGRPFVYRL--GPDFRP-----VGEPDA-NGFRGKFISDLMTAGAAVCVGDLEWRLGRCEELMRENPLVVPEDC 615
            R+L+G  Q +VP+K++W LNERHYGALQGK+KA+ EA+LG IV EWRRS   RPP M   HPH+PLIA D RYR + +P  ESL DT  RVW YW+ E+   +  G+++LV+AHANT+R+L + LD +++ +++ + IPTG+PF+Y    GP  RP     VG  D+ +GF+G FI D        C    E R   CE    E+P  VPE+C
Sbjct:  119 RILDGCDQAFVPVKSSWMLNERHYGALQGKNKAKLEAELGQIVVEWRRSSMVRPPVMTKTHPHYPLIARDRRYRNIKVPLSESLSDTAERVWEYWQREVVPGMMEGQNILVVAHANTLRALCQRLDGLTDAQVRELYIPTGKPFLYEFAQGPSGRPGDLVTVGPRDSKSGFKGYFIQDDQD----TCRQAYEMRRLLCEAKFAEDPENVPEEC 327          
BLAST of mRNA_P-wetherbeei_contig11737.2.1 vs. uniprot
Match: D8LCP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCP1_ECTSI)

HSP 1 Score: 177 bits (449), Expect = 4.710e-52
Identity = 81/135 (60.00%), Postives = 101/135 (74.81%), Query Frame = 1
Query:    4 LLEGGGQPYVPIKTTWRLNERHYGALQGKSKAETEAQLGPIVREWRRSFSARPPPMEPNHPHWPLIADDPRYRGVDIPRCESLDDTVRRVWSYWEGEICRDLGAGKSVLVMAHANTIRSLVKVLDDVSEEKIKAV 408
            LL+G  QPY+P+KT+WRLNERHYGALQG++KA  E  +G IV EWRR++  RPPPM   HPHWPLI+ D RYRGV +P  ESL DT +RV  YWE +I  D+ AGK V+V+AHANT+RSLVK  + V +  + AV
Sbjct:   58 LLDGCDQPYIPVKTSWRLNERHYGALQGRNKAVLEEDMGDIVVEWRRAYGIRPPPMTETHPHWPLISLDDRYRGVKVPESESLRDTAKRVMEYWESDIVPDVRAGKRVVVVAHANTLRSLVKNNNLVRQSWVTAV 192          
BLAST of mRNA_P-wetherbeei_contig11737.2.1 vs. uniprot
Match: A0A0Q5EHM8_9MICO (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=12 Tax=Plantibacter TaxID=190323 RepID=A0A0Q5EHM8_9MICO)

HSP 1 Score: 166 bits (419), Expect = 9.540e-48
Identity = 83/156 (53.21%), Postives = 108/156 (69.23%), Query Frame = 1
Query:    7 LEGGGQPYVPIKTTWRLNERHYGALQGKSKAETEAQLGPI-VREWRRSFSARPPPMEPNHPHWPLIADDPRYRGVD--IPRCESLDDTVRRVWSYWEGEICRDLGAGKSVLVMAHANTIRSLVKVLDDVSEEKIKAVKIPTGRPFVYRLGPDFRPV 465
            LE   + ++P+K +WRLNERHYGALQGK KA+T A+ GP   + WRRSF   PPP+  +   W   ADDPRY G+D  +PR E L D + R+  YWE +I  DL AGK+VLV AH N++R+LVK LDD+S+++I  + IPTG P VY L  DFRP+
Sbjct:   72 LETADRMWIPVKRSWRLNERHYGALQGKDKAQTLAEYGPEQFQTWRRSFDVPPPPIADDD-QWSQ-ADDPRYVGIDGELPRTECLKDVIDRMLPYWESDITVDLAAGKTVLVTAHGNSLRALVKHLDDISDDEIAELNIPTGIPLVYELDADFRPI 225          
BLAST of mRNA_P-wetherbeei_contig11737.2.1 vs. uniprot
Match: A0A176QF62_9MICO (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=4 Tax=Janibacter melonis TaxID=262209 RepID=A0A176QF62_9MICO)

HSP 1 Score: 164 bits (415), Expect = 3.220e-47
Identity = 82/181 (45.30%), Postives = 107/181 (59.12%), Query Frame = 1
Query:    7 LEGGGQPYVPIKTTWRLNERHYGALQGKSKAETEAQLGPI-VREWRRSFSARPPPMEPNHPHWPLIADDPRYRGVDIPRCESLDDTVRRVWSYWEGEICRDLGAGKSVLVMAHANTIRSLVKVLDDVSEEKIKAVKIPTGRPFVYRLGPDFRPVGEPDANGFRGKFISDLMTAGAAVCVGD 546
            L+   + +VP++  WRLNERHYGALQG  KA T  + G      WRRSF   PPP+EP+  +     DDPRY G+D+PR E L D + R   YWEG +  DL AG++VLV+AH N++R LVK LD +S+E I  + IPTG P VY LG D  P G        G+++     A  A  V +
Sbjct:   69 LDACDRHWVPVRRDWRLNERHYGALQGLDKAATREKYGDEQFMLWRRSFDTPPPPIEPDDEY--AQTDDPRYAGIDVPRTECLKDVIERFMPYWEGPLAEDLRAGRTVLVVAHGNSLRGLVKHLDGISDEDIAGLNIPTGMPLVYELGDDLMPTGP-------GRYLDPEAAAAEAAAVAN 240          
BLAST of mRNA_P-wetherbeei_contig11737.2.1 vs. uniprot
Match: A0A2P8GRJ4_9MICO (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=4 Tax=Labedella TaxID=390250 RepID=A0A2P8GRJ4_9MICO)

HSP 1 Score: 164 bits (415), Expect = 3.810e-47
Identity = 86/180 (47.78%), Postives = 115/180 (63.89%), Query Frame = 1
Query:    7 LEGGGQPYVPIKTTWRLNERHYGALQGKSKAETEAQLGPI-VREWRRSFSARPPPMEPNHPHWPLIADDPRYRGVD--IPRCESLDDTVRRVWSYWEGEICRDLGAGKSVLVMAHANTIRSLVKVLDDVSEEKIKAVKIPTGRPFVYRLGPDFRPVGEPDANGFRGKFIS-DLMTAGAAV 534
            LE   + ++P+K +WRLNERHYGALQGK KA+T A+ G      WRRSF   PPP++P   +    A+DPRY  +D  IP  E L D + R+  YWE +I  DL AGK+VLV AH N++R+LVK LD +S+++I  + IPTG P VY+L  DFRP+G        G+++  D   AGAA 
Sbjct:   72 LEVADRAWIPVKRSWRLNERHYGALQGKDKAQTLAEYGQEQFMTWRRSFDVPPPPIDPTDEY--SQANDPRYADIDGEIPATECLKDVIERMLPYWESDITGDLAAGKTVLVTAHGNSLRALVKHLDGISDDEISELNIPTGIPLVYKLDADFRPLGP-------GEYLDPDAAAAGAAA 242          
BLAST of mRNA_P-wetherbeei_contig11737.2.1 vs. uniprot
Match: A0A7S2RJU0_9STRA (Phosphoglycerate mutase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJU0_9STRA)

HSP 1 Score: 166 bits (420), Expect = 2.550e-46
Identity = 94/222 (42.34%), Postives = 124/222 (55.86%), Query Frame = 1
Query:    7 LEGGGQPYVPIKTTWRLNERHYGALQGKSKAETEAQLGP-IVREWRRSFSARPPPMEPNHPHWPLIADDPRYRGV----DIPRCESLDDTVRRVWSYWEGEICRDLGAGKSVLVMAHANTIRSLVKVLDDVSEEKIKAVKIPTGRPFVYRLGPDFRPVGEP----DAN----------GFRGKFISDLMTAGAAVCVGDLEWRLGRCEELMRENPLVVPEDC 615
            LE  GQ +V ++  W+LNERHYGALQG SKA  E + G  +V  WR+ +  RPPPM  +HPHW L+A D RYR +     IP  ESL DT  RV   W GEI   +  GK VLV+AH N++R+L++ L+ +S+E++  + IPTG PFVY L    RPVG P    + N          GF+G F+SD        C       + +C     E+P   PE C
Sbjct:  165 LEACGQTWVDVRPRWQLNERHYGALQGLSKARIEEEYGSDLVSGWRQGYHVRPPPMGHDHPHWALMAQDRRYRDLVDTDTIPVTESLADTAVRVMELWHGEIAPLIAEGKRVLVIAHRNSLRALIRNLEGLSDEQVAQMTIPTGAPFVYPLEEHLRPVGVPLSCENGNNDDPEKSAGCGFQGIFLSDDQ------CEKSYRRTIAQCLSDWDEDPAHPPEAC 380          
BLAST of mRNA_P-wetherbeei_contig11737.2.1 vs. uniprot
Match: A0A7X7XHV6_9BACT (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7X7XHV6_9BACT)

HSP 1 Score: 161 bits (408), Expect = 4.310e-46
Identity = 83/160 (51.88%), Postives = 108/160 (67.50%), Query Frame = 1
Query:   28 YVPIKTTWRLNERHYGALQGKSKAETEAQLGPI-VREWRRSFSARPPPMEPNHPHWPLIADDPRYRGV---DIPRCESLDDTVRRVWSYWEGEICRDLGAGKSVLVMAHANTIRSLVKVLDDVSEEKIKAVKIPTGRPFVYRLGPDFRPV-----GEPDA 480
            ++P+  +WRLNERHYGALQG +KAET  + G   V+ WRRS+  +PP +EP+ P +P    DPRYRG+   D+PR E L DTV RV  YWEG I   + AG+ VLV+AH N++R+LVK LDDVS+E+I  + IPTG P VY L    RP+     G+P A
Sbjct:   76 WIPVVRSWRLNERHYGALQGLNKAETAEKFGEAQVKLWRRSYDVQPPALEPSDPRFP--GHDPRYRGLGDADLPRTECLKDTVARVMPYWEGVIAPAVAAGQRVLVVAHGNSLRALVKYLDDVSDEEIVGLNIPTGVPLVYELDDRIRPIRHYYLGDPAA 233          
BLAST of mRNA_P-wetherbeei_contig11737.2.1 vs. uniprot
Match: A0A1T5IVA5_9MICO (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=2 Tax=Microbacteriaceae TaxID=85023 RepID=A0A1T5IVA5_9MICO)

HSP 1 Score: 161 bits (408), Expect = 4.440e-46
Identity = 84/161 (52.17%), Postives = 109/161 (67.70%), Query Frame = 1
Query:    7 LEGGGQPYVPIKTTWRLNERHYGALQGKSKAETEAQLGPI-VREWRRSFSARPPPMEPNHPHWPLIADDPRYRGVD--IPRCESLDDTVRRVWSYWEGEICRDLGAGKSVLVMAHANTIRSLVKVLDDVSEEKIKAVKIPTGRPFVYRLGPDFRPVGEPDA 480
            L+   + ++P+K TWRLNERHYGALQGK KA+T A+ GP   + WRRSF   PPP++ +  +    A+DPRY G+D  IP  E L D + R+  YW  +I  DL AGK+VLV AH N++R+LVK LD +S+E I  + IPTG P VY+L  DFRPV EP A
Sbjct:   72 LDTADRLWIPVKRTWRLNERHYGALQGKDKAQTLAEYGPEQFQTWRRSFDVPPPPIDADDQY--SQANDPRYVGIDGDIPATECLKDVIDRMLPYWHSDITGDLAAGKTVLVTAHGNSLRALVKHLDGISDEDIAELNIPTGIPLVYKLDADFRPV-EPAA 229          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11737.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JD41_9PHAE8.840e-8157.28Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CDH1_9STRA1.530e-7561.63Histidine phosphatase superfamily n=1 Tax=Tribonem... [more]
A0A7S2UY13_9STRA4.870e-6148.36Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
D8LCP1_ECTSI4.710e-5260.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A0Q5EHM8_9MICO9.540e-4853.212,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
A0A176QF62_9MICO3.220e-4745.302,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
A0A2P8GRJ4_9MICO3.810e-4747.782,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
A0A7S2RJU0_9STRA2.550e-4642.34Phosphoglycerate mutase n=1 Tax=Rhizochromulina ma... [more]
A0A7X7XHV6_9BACT4.310e-4651.882,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
A0A1T5IVA5_9MICO4.440e-4652.172,3-bisphosphoglycerate-dependent phosphoglycerate... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11737contigP-wetherbeei_contig11737:650..2087 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LCP0
PFAMsHis_Phos_1
Model size618
Max annot lvl2759|Eukaryota
KEGG rclassRC00536
KEGG koko:K01834
KEGG ReactionR01518
KEGG Pathwayko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230
KEGG ModuleM00001,M00002,M00003
Hectar predicted targeting categoryother localisation
Exons4
Evalue4.82e-83
EggNOG OGsCOG0588@1|root,KOG0235@2759|Eukaryota
EC5.4.2.11
Descriptionregulation of pentose-phosphate shunt
Cds size618
COG categoryG
BRITEko00000,ko00001,ko00002,ko01000,ko04131,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185924.4265735-CDS-P-wetherbeei_contig11737:649..8981683185924.4265735-CDS-P-wetherbeei_contig11737:649..898Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11737 650..898 -
1683185924.435688-CDS-P-wetherbeei_contig11737:1151..12991683185924.435688-CDS-P-wetherbeei_contig11737:1151..1299Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11737 1152..1299 -
1683185924.4430394-CDS-P-wetherbeei_contig11737:1600..17191683185924.4430394-CDS-P-wetherbeei_contig11737:1600..1719Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11737 1601..1719 -
1683185924.4501698-CDS-P-wetherbeei_contig11737:1985..20871683185924.4501698-CDS-P-wetherbeei_contig11737:1985..2087Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11737 1986..2087 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11737.2.1prot_P-wetherbeei_contig11737.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig11737 650..2087 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig11737.2.1

>prot_P-wetherbeei_contig11737.2.1 ID=prot_P-wetherbeei_contig11737.2.1|Name=mRNA_P-wetherbeei_contig11737.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=206bp
RLLEGGGQPYVPIKTTWRLNERHYGALQGKSKAETEAQLGPIVREWRRSF
SARPPPMEPNHPHWPLIADDPRYRGVDIPRCESLDDTVRRVWSYWEGEIC
RDLGAGKSVLVMAHANTIRSLVKVLDDVSEEKIKAVKIPTGRPFVYRLGP
DFRPVGEPDANGFRGKFISDLMTAGAAVCVGDLEWRLGRCEELMRENPLV
VPEDCY
back to top

mRNA from alignment at P-wetherbeei_contig11737:650..2087-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig11737.2.1 ID=mRNA_P-wetherbeei_contig11737.2.1|Name=mRNA_P-wetherbeei_contig11737.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1438bp|location=Sequence derived from alignment at P-wetherbeei_contig11737:650..2087- (Phaeothamnion wetherbeei SAG_119_79)
AGGCTGCTGGAGGGAGGCGGGCAGCCGTATGTGCCCATCAAGACGACATG GCGCCTCAACGAGCGGCACTATGGCGCCCTGCAGGGCAAGAGCAAGGCCG AGGTGTGCTTTGGATCTTGTATTACCTGGCACTTCAGTTGAGAGGCAATG ATTGAAGCGACAGTTCGCTACTTCTCTTTATTTCGCGTGCCTGTGCGTAT GCGCTGGTATGCCCGATGTCGATATTCAGTCCTTCGTCTCGGGGCAAGCT TCCGCTTTGTGCTCTTATCACCGGCGATGAGAATTGCCATGCCTGCTCAT ATCTTACCCTTTACTTCGCCAACTTCCCCTATTTCCCGTGTCTCTACTGG CGGGCGTGAGAGTCGCAGACGGAGGCGCAGCTGGGTCCGATCGTGCGCGA ATGGCGGCGGTCGTTTTCAGCACGGCCGCCACCGATGGAGCCCAATCACC CTCACTGGCCATTGATCGCCGATGACCCCCGCTACAGGTACAGTTAGTCA GCCAGGAGGTGAAATCGTCTTGGGTTGATGCATTGTGCAAACGGAGGTGC GGAAGGTGCTCCAAAGGTGTCTGGGCCGGATTGCGGTCAGACCTGTCTTA GTTGCGGCGGTGGCCGCAGCGGCGGCGGCGGCAGCCAACCAACCATCTTG CAGCTCCCTTGGCTCCGCCTACCTTTTCGTTTTGGGCGCCCCTTTGGACC TTGTCATTCTCCCTTTTCTGCCCTCCGTCCTGTTCACCCGTATGCCACCT GCCCTGTGCGCGCCCTGGTCTGTTGCGGCGGCCGGCAGGGGCGTAGATAT CCCGCGGTGCGAGTCTCTGGACGACACGGTACGCCGCGTGTGGTCGTATT GGGAGGGAGAGATCTGTCGCGACCTTGGGGCCGGCAAGAGCGTCCTCGTC ATGGCCCATGCCAACACCATCCGCAGCCTCGTCAAGGTGCGTATGGTTGA AGGGCGCGTTGTGGAGGAAAAAGAAAGGCAGATGCTGCCTCTGGAATGCA CATTAATGCGGAGCGATTGGTCACTTGGATTTACTCCTTTTGCTGAAAAG AAGCCGCGGGCCTCCGCGTCCTCTATCGGACAGCGTGAAGCGCCGCTACG TTCACCGCCTTTGTAAGCTGCAAATTGCAGTAGAAACCGAAATCTCTGCC ACTTCTATCTCCGTTTCCCGCCGCTGGCAACTGCCCCAGGTGCTGGACGA CGTCAGCGAGGAGAAGATCAAAGCCGTCAAGATCCCCACCGGGCGCCCCT TCGTCTACCGGCTCGGGCCCGACTTCCGCCCGGTGGGCGAGCCGGACGCC AACGGATTCCGCGGCAAGTTCATCTCAGACCTCATGACGGCCGGCGCCGC CGTCTGTGTCGGCGACCTCGAGTGGCGGCTTGGCCGCTGCGAAGAACTGA TGCGGGAGAACCCGCTCGTGGTGCCCGAGGACTGCTAC
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig11737:650..2087-

>mRNA_P-wetherbeei_contig11737.2.1 ID=mRNA_P-wetherbeei_contig11737.2.1|Name=mRNA_P-wetherbeei_contig11737.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=618bp|location=Sequence derived from alignment at P-wetherbeei_contig11737:650..2087- (Phaeothamnion wetherbeei SAG_119_79)
AGGCTGCTGGAGGGAGGCGGGCAGCCGTATGTGCCCATCAAGACGACATG
GCGCCTCAACGAGCGGCACTATGGCGCCCTGCAGGGCAAGAGCAAGGCCG
AGACGGAGGCGCAGCTGGGTCCGATCGTGCGCGAATGGCGGCGGTCGTTT
TCAGCACGGCCGCCACCGATGGAGCCCAATCACCCTCACTGGCCATTGAT
CGCCGATGACCCCCGCTACAGGGGCGTAGATATCCCGCGGTGCGAGTCTC
TGGACGACACGGTACGCCGCGTGTGGTCGTATTGGGAGGGAGAGATCTGT
CGCGACCTTGGGGCCGGCAAGAGCGTCCTCGTCATGGCCCATGCCAACAC
CATCCGCAGCCTCGTCAAGGTGCTGGACGACGTCAGCGAGGAGAAGATCA
AAGCCGTCAAGATCCCCACCGGGCGCCCCTTCGTCTACCGGCTCGGGCCC
GACTTCCGCCCGGTGGGCGAGCCGGACGCCAACGGATTCCGCGGCAAGTT
CATCTCAGACCTCATGACGGCCGGCGCCGCCGTCTGTGTCGGCGACCTCG
AGTGGCGGCTTGGCCGCTGCGAAGAACTGATGCGGGAGAACCCGCTCGTG
GTGCCCGAGGACTGCTAC
back to top