mRNA_P-wetherbeei_contig11723.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig11723.1.1 vs. uniprot
Match: A0A7S4JJR8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JJR8_9STRA) HSP 1 Score: 148 bits (374), Expect = 1.350e-40 Identity = 95/214 (44.39%), Postives = 116/214 (54.21%), Query Frame = 1 Query: 7 QLRLLDSVDEGLRQPSADVQEAAGAALAALLRSYFPISPAGPSARLRARTTEKYVTGLGATDNAAAARGYALXXXXXXXXXXXXXXXXXXXXXXXXXXXADPAARVGDEADAETRVNAIVALAAMCEEVGI---GGPRRWRKPQQSAPTAVTAETAAKNGVESCAEGEPALPVRLGAAEVRLVFDALLRAAGDYSMDKRGDVGSWCRTAALRAL 639 Q+RLLDSVD+ L+ P+ VQ AAG+AL+ALLRSYFP+ P GPS RLR R +KY + DN AA RGYAL +VGDE DAETR NA+++L A+CEEVG+ GG P A AAK GV V L V +VF+ALL + GDY+ D+RGDVGSW R AA+R L Sbjct: 24 QVRLLDSVDDCLKHPNEKVQSAAGSALSALLRSYFPVGPTGPSVRLRGRVVQKYTDIVRTEDNPAATRGYALALGRIPRKLLAPDEHTLGGVLACLIDAVGVDRKVGDEGDAETRRNAVLSLTAVCEEVGVEEDGG--------DGDPNGGEAAAAAKAGV-----------VGLSGEHVEMVFNALLASLGDYNSDRRGDVGSWSRIAAMRGL 218
BLAST of mRNA_P-wetherbeei_contig11723.1.1 vs. uniprot
Match: B8BSV8_THAPS (Tubulin-specific chaperone d (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BSV8_THAPS) HSP 1 Score: 120 bits (301), Expect = 9.020e-28 Identity = 80/216 (37.04%), Postives = 110/216 (50.93%), Query Frame = 1 Query: 1 KLQLRLLDSVDEGLRQPSADVQEAAGAALAALLRSYFPISPAGPSARLRARTTEKYVTGLGATDNAAAARGYALXXXXXXXXXXXXXXXXXXXXXXXXXXXADPAARVGDEADAETRVNAIVALAAMCEEVGIGGPRRWRKPQQSAPTAVTAETAAKNGVESCAEGEPALPVRLGAAEVRLVFDALLRAAGDYSMDKRGDVGSWCRTAALRALERL 648 K Q+RLLDSVD L P+ +Q +A AL ALL SYFP+S GPS RL++R +KY++ + + DN AA RG++L + + VG E DAETR NAI++L +C+ GIG +++ A + N + +C + VF ALL A DY+MD+RGDVGSW R AA+ LE L Sbjct: 656 KQQVRLLDSVDACLVHPNETIQNSAAKALLALLTSYFPVSSKGPSERLQSRVVDKYISIVKSEDNPAATRGFSLALGHLPGKLLAPSEQVLDSVLDCLIHASKKSTLVGGEGDAETRRNAILSLINVCKTAGIGH------------SSLEANLSPTNSLTTC--------------QTERVFAALLSAMEDYNMDRRGDVGSWSRVAAMNGLEAL 845
BLAST of mRNA_P-wetherbeei_contig11723.1.1 vs. uniprot
Match: A0A7S2LXC9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LXC9_9STRA) HSP 1 Score: 108 bits (269), Expect = 1.320e-25 Identity = 72/214 (33.64%), Postives = 106/214 (49.53%), Query Frame = 1 Query: 7 QLRLLDSVDEGLRQPSADVQEAAGAALAALLRSYFPISPAGPSARLRARTTEKYVTGLGATDNAAAARGYALXXXXXXXXXXXXXXXXXXXXXXXXXXXADPAARVGDEADAETRVNAIVALAAMCEEVGIGGPRRWRKPQQSAPTAVTAETAAKNGVESCAEGEPALPVRLGAAEVRLVFDALLRAAGDYSMDKRGDVGSWCRTAALRALERL 648 Q+RLLDSVD L P+ ++Q +A AL +L+ +FP++ GPS RL+AR +KY++ + DN AA RG++L + + VG E DAETR N+I +L +C+ VG R + ++P + L + + VFD+LL A DY+ D+RGDVGSW R AA++ LE L Sbjct: 2 QVRLLDSVDACLVHPNEEIQNSAAEALRSLMSYHFPVTEKGPSTRLQARVVDKYISIVNTEDNPAATRGFSLGLGVLPAKLLAPTHVVLDSVLDCLCNSSAKESLVGGEGDAETRRNSIFSLVNVCKAVGF--ERCEQTNSSTSPVCL-----------------------LTRCQTKRVFDSLLSAMEDYNTDRRGDVGSWSRIAAMKGLEAL 190
BLAST of mRNA_P-wetherbeei_contig11723.1.1 vs. uniprot
Match: A0A835ZJS0_9STRA (Tubulin folding cofactor D n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJS0_9STRA) HSP 1 Score: 111 bits (277), Expect = 1.490e-24 Identity = 85/213 (39.91%), Postives = 94/213 (44.13%), Query Frame = 1 Query: 10 LRLLDSVDEGLRQPSADVQEAAGAALAALLRSYFPISPAGPSARLRARTTEKYVTGLGATDNAAAARGYALXXXXXXXXXXXXXXXXXXXXXXXXXXXADPAARVGDEADAETRVNAIVALAAMCEEVGIGGPRRWRKPQQSAPTAVTAETAAKNGVESCAEGEPALPVRLGAAEVRLVFDALLRAAGDYSMDKRGDVGSWCRTAALRALERL 648 +RLLD+ DE LRQ S DVQ AA AA ALLR L R +V GL A ARG+AL P ARVG E DAETR NA+ ALAA+CE VG G V G L AA+ VF ALLRA DY DKRGDVGSWCR AA+ ALER+ Sbjct: 751 VRLLDTCDECLRQVSEDVQRAAAAAARALLRRACAGGAGAADEALFERAVAAHVRGLAEAAAPAEARGHALALGALPRPLAARDAAARARVLTALAAACAPGARVGGEGDAETRRNAVAALAAVCETVGFG-------------------------VSGGGGG-----AGLTAADAAAVFAALLRATDDYGTDKRGDVGSWCRVAAMHALERM 933
BLAST of mRNA_P-wetherbeei_contig11723.1.1 vs. uniprot
Match: A0A4D9D438_9STRA (TFCD_C domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D438_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 5.100e-20 Identity = 75/218 (34.40%), Postives = 98/218 (44.95%), Query Frame = 1 Query: 1 KLQLRLLDSVDEGLRQPSADVQEAAGAALAALLRSYFPISPAGPSARLRARTTEKYVTGLGATDNAAAARGYALXXXXXXXXXXXXXXXXXXXXXXXXXXXADPAARVGDEADAETRVNAIVALAAMCEEVGI---GGPRRWRKPQQSAPTAVTAETAAKNGVESCAEGEPALPVRLGAAEVRLVFDALLRAAGDYSMDKRGDVGSWCRTAALRALER 645 K QLRLLDS+DE LR P+ V+ A AA+ A +YF PSAR++AR +KY + +N A RG+ P RVGDE DAETR N I+AL M E +G+ GG R+ + + A+V + LL+ DY+MDKRGDVGSW R AAL+ LE+ Sbjct: 747 KTQLRLLDSLDENLRHPTDAVRAHAVAAIRAFTHAYFGRGMDEPSARVQARVVDKYRRLVETDENVALTRGFLRALGALPSRLLFPSFPALLDTIETQLA---PDRRVGDEPDAETRRNGILALGEMAETLGVEVSGGERKGARG-------------------------------MNRAQVHRLISLLLKGTDDYAMDKRGDVGSWVRMAALQGLEK 930
BLAST of mRNA_P-wetherbeei_contig11723.1.1 vs. uniprot
Match: B5Y3W4_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B5Y3W4_PHATC) HSP 1 Score: 95.9 bits (237), Expect = 3.160e-19 Identity = 70/214 (32.71%), Postives = 96/214 (44.86%), Query Frame = 1 Query: 7 QLRLLDSVDEGLRQPSADVQEAAGAALAALLRSYFPISPAGPSARLRARTTEKYVTGLGATDNAAAARGYALXXXXXXXXXXXXXXXXXXXXXXXXXXXADPAARVGDEADAETRVNAIVALAAMCEEVGIGGPRRWRKPQQSAPTAVTAETAAKNGVESCAEGEPALPVRLGAAEVRLVFDALLRAAGDYSMDKRGDVGSWCRTAALRALERL 648 Q+RLLDS+D + PS +Q+ A AL LL SYFP+ GPS RL+ R +K+V + N AA RGY A + VG E+DAE+R N++ +L+++ EVGI R + Q V LG + VFD DYS+D+RGDVGSW R A++ A+ L Sbjct: 758 QVRLLDSIDASIPHPSESIQDNACCALQVLLVSYFPVGVNGPSQRLQRRIVDKFVNIISNETNPAATRGYVKAIGYLPAKLLAPNRSVLAGIIDCLRKAARYDSLVGGESDAESRRNSLQSLSSIASEVGIVDVSRQSENPQ---------------------------VSLGRNLLDTVFDCFFLGLEDYSIDRRGDVGSWSRVASMDAMVEL 944
BLAST of mRNA_P-wetherbeei_contig11723.1.1 vs. uniprot
Match: A0A7S2Y465_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y465_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 3.800e-16 Identity = 65/205 (31.71%), Postives = 95/205 (46.34%), Query Frame = 1 Query: 25 SVDEGLRQPSADVQEAAGAALAALLRSYFPISPAGPSARLRARTTEKYVTGLGATDNAAAARGYALXXXXXXXXXXXXXXXXXXXXXXXXXXXADPAARVGDEADAETRVNAIVALAAMCEEVGIGGPRRWRKPQQSAPTAVTAETAAKNGVESCAEGEPALPVRLGAAEVRLVFDALLRAAGDYSMDKRGDVGSWCRTAALRAL 639 ++D + P+ D+Q+ A +L LL +YFP+ GPS RLR R +K++ L ++ N AA RGY L ++P A+V E DAETR NA+ AL+ + T + T +S + P P L A + V +A L + DY++D+RGDVGSWCR AA+ L Sbjct: 1 AIDASIPHPNEDIQKCACVSLEQLLTTYFPVGEKGPSDRLRTRVLDKFLKQL-SSKNPAATRGYCLALGHLPAKLLAPTCESLDTTIRALSRASNPKAKVDGEGDAETRRNAVKALSRLV-------------------TTIVTSTINSRSNDSVRK-YPINP--LTAEQCTRVVNAFLWSLEDYNVDRRGDVGSWCRMAAMDGL 182
BLAST of mRNA_P-wetherbeei_contig11723.1.1 vs. uniprot
Match: A0A7S2SV11_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV11_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 8.090e-14 Identity = 53/120 (44.17%), Postives = 63/120 (52.50%), Query Frame = 1 Query: 1 KLQLRLLDSVDEGLRQPSADVQEAAGAALAALLRSYFPISPAGPSARLRARTTEKYVTGLGATDNAAAARGYALXXXXXXXXXXXXXXXXXXXXXXXXXXXADPAARVGDEADAETRVNA 360 K+QLRLLDS+DE L+ VQ A AAL RSYFP+ P GPSARL+AR +KY+ L D A+ RG+AL A +RVGDE DAETR NA Sbjct: 309 KMQLRLLDSLDESLKHSIEAVQLQAVAALRQFTRSYFPVGPDGPSARLQARVLDKYLEILRTADIASHTRGHALAVGALPSRLVAFSPENLDKVLATLCSSAAVGSRVGDEPDAETRRNA 428
BLAST of mRNA_P-wetherbeei_contig11723.1.1 vs. uniprot
Match: A0A8J5XJ39_DIALT (Uncharacterized protein n=3 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XJ39_DIALT) HSP 1 Score: 80.1 bits (196), Expect = 8.970e-14 Identity = 71/217 (32.72%), Postives = 97/217 (44.70%), Query Frame = 1 Query: 1 KLQLRLLD-SVDEGLRQPSADVQEAAGAALAALLRSYFPISPAGPSARLRARTTEKYVTGLGATDNAAAARGYALXXXXXXXXXXXXXXXXXXXXXXXXXXXADPAARVGDEADAETRVNAIVALAAMCEEVGIGGPRRWRKPQQSAPTAVTAETAAKNGVESCAEGEPALPVRLGAAEVRLVFDALLRAAGDYSMDKRGDVGSWCRTAALRALERL 648 + Q R++D ++ E LR P+ + AA AAL A+ SY A +ARL AR + + L DNAAA RG AL D R D ETR NA A+AA+ +GI P + AP E +A+ + +G L A++ ++ LL DY +DKRGDVGSW R AA+ +LE L Sbjct: 871 RAQARVVDVTIVECLRHPTETIAAAAAAALHAIASSYLDTPAAARNARLGAR----FASVLATDDNAAATRGAALALAALPRAQLLPAADAVVDALVAASTLPDAVER----RDPETRRNAARAIAAVARTLGIAPPVPPAXXRARAPAPANGEASAEPALNGGRDG-------LSEAQLCRLWAQLLACMADYEVDKRGDVGSWVREAAMLSLETL 1072
BLAST of mRNA_P-wetherbeei_contig11723.1.1 vs. uniprot
Match: A0A2K1L215_PHYPA (TFCD_C domain-containing protein n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1L215_PHYPA) HSP 1 Score: 78.6 bits (192), Expect = 2.960e-13 Identity = 75/216 (34.72%), Postives = 105/216 (48.61%), Query Frame = 1 Query: 1 KLQLRLLDSVDEGLRQPSADVQEAAGAALAALLRSYFPISPAGPSARLRARTTEKYVTGLGATDNAAAARGYALXXXXXXXXXXXXXXXXXXXXXXXXXXXADPAARVGDEADAETRVNAIVALAAMCEEVGIGGPRRWRKPQQSAPTAVTAETAAKNGVESCAEGEPALPVRLGAAEVRL-VFDALLRAAGDYSMDKRGDVGSWCRTAALRALER 645 K+Q L D++DE L+ P++D+Q AA AAL + +Y + PA SA R+T KYV L A N +A RG AL P RV D+ DAETR+NA+ LAA+CE + GGP E+ + + S + +P + +R V + L +A DY++D RGDVGSW R AA+ AL+R Sbjct: 708 KIQKSLHDTLDENLKHPNSDIQAAAVAALKPFIHTY--LLPA--SATTVTRSTGKYVQILKADPNPSAKRGAALAFTALPGELLAPVWKDVICTLSAATI---PEERVEDQ-DAETRMNAVRGLAAVCETL-YGGP---------------GESLSNIFIPS----DALVPHKQLTLVIREEVMEVLFKALEDYAVDNRGDVGSWVREAAMDALKR 895 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11723.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig11723.1.1 >prot_P-wetherbeei_contig11723.1.1 ID=prot_P-wetherbeei_contig11723.1.1|Name=mRNA_P-wetherbeei_contig11723.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=216bp KLQLRLLDSVDEGLRQPSADVQEAAGAALAALLRSYFPISPAGPSARLRAback to top mRNA from alignment at P-wetherbeei_contig11723:1375..2079- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig11723.1.1 ID=mRNA_P-wetherbeei_contig11723.1.1|Name=mRNA_P-wetherbeei_contig11723.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=705bp|location=Sequence derived from alignment at P-wetherbeei_contig11723:1375..2079- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig11723:1375..2079- >mRNA_P-wetherbeei_contig11723.1.1 ID=mRNA_P-wetherbeei_contig11723.1.1|Name=mRNA_P-wetherbeei_contig11723.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=648bp|location=Sequence derived from alignment at P-wetherbeei_contig11723:1375..2079- (Phaeothamnion wetherbeei SAG_119_79)back to top |