mRNA_P-wetherbeei_contig11720.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig11720.1.1
Unique NamemRNA_P-wetherbeei_contig11720.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig11720.1.1 vs. uniprot
Match: A0A7Z9PT42_9BACT (Type II secretion system F family protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Z9PT42_9BACT)

HSP 1 Score: 363 bits (931), Expect = 6.800e-120
Identity = 190/405 (46.91%), Postives = 283/405 (69.88%), Query Frame = 1
Query:    1 MPHFFFRVLDVTDKVIQGSLDAPSESLANERLKKIYKKVISLREEEIVAGAAVSKKGPRVKLEPLSLYTRQLAVMLNAGISINRVLRFLTQGEDVNMNLISACLAESVEGGNSLSMAMSEQPRCFNPTYVALVRAGEKSGRLERALLKLADLQEKIVKLKKRMVSTFAYPAVIGLVCALNAALFVFYIIPIMLPLFSSLNVVLPWPTRVVLWTTEVVHEPVFLGGLALLSLISAVVGLKMWRN----SRSRYWIDLSLTRLPVFGHLITLNTSARVLYTMATLLDAGVGLPDCLVILSEVAGNLVTSERLKNARGAMLDGNSVFRSMQMFDVFPSTALQMLKVGEESGRLSEMVGRIAIIFEEDTDTQLDRFAALVEPLLMGVMGSLVAFIVLATFLPVISLISQ 1203
            M  F F+V+D  D+V+ G+L AP+   A ERL+ +YK V+ + E++  A A   K+ PRVK++ L++Y RQLAVM+NAGI++NR LRF ++GED N+NL+   +AE VEGG S+S A+ EQPR F   ++ALV+AGE SG L+ AL KLADL EK V ++K++ ST AYPAVI +V     A F FYI+P M+P+F S+N  LP PTR+++W    +  P   G LA+ +++ +++   +++N       RY++D  L R+PV G L  + T ARVL+TMATLLD+GV L + L+++ +VA N V S R++ +R ++L G+SVF + +  +VF + AL M+KVGEE+G L+EMV RI  ++EED + QLD+ ++L+EPL+M VMG +V FI +A+FLP++ L++ 
Sbjct:    1 MASFIFKVIDERDQVVSGTLSAPNAQAAQERLRAVYKNVLVVEEQKSSATANALKRSPRVKIDSLAVYCRQLAVMVNAGIAVNRALRFCSRGEDHNLNLVMNRVAEEVEGGKSVSQALGEQPRVFGNIFIALVKAGETSGNLDIALKKLADLLEKTVGMQKKVQSTLAYPAVIFVVAVCVVAFFTFYIMPQMIPIFESMNTTLPLPTRIMMWIASTLRNPWVSGPLAVGTVLGSIMLFNLYQNLDKTPEIRYYVDQYLLRIPVVGPLFRMATQARVLFTMATLLDSGVSLAETLLVVEKVANNEVYSRRIRWSRESLLQGSSVFAAFESHEVFSAMALHMIKVGEETGTLAEMVRRIGQMYEEDVEHQLDQLSSLIEPLIMAVMGLVVGFITVASFLPMVQLLNN 405          
BLAST of mRNA_P-wetherbeei_contig11720.1.1 vs. uniprot
Match: A0A7X9AF44_9BURK (Type II secretion system F family protein n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X9AF44_9BURK)

HSP 1 Score: 283 bits (724), Expect = 2.090e-88
Identity = 159/400 (39.75%), Postives = 250/400 (62.50%), Query Frame = 1
Query:   16 FRVLDVTDKVIQGSLDAPSESLANERLKKIYKKVISLREEEIVAGAAVSKKGPRVKLEPLSLYTRQLAVMLNAGISINRVLRFLTQGEDVNMNLISACLAESVEGGNSLSMAMSEQPRCFNPTYVALVRAGEKSGRLERALLKLADLQEKIVKLKKRMVSTFAYPAVIGLVCALNAALFVFYIIPIMLPLFSSLNVVLPWPTRVVLWTTEVVHEPVFLGGLALLSLISAVVGLKMWRN-SRS---RYWIDLSLTRLPVFGHLITLNTSARVLYTMATLLDAGVGLPDCLVILSEVAGNLVTSERLKNARGAMLDGNSVFRSMQMFDVFPSTALQMLKVGEESGRLSEMVGRIAIIFEEDTDTQLDRFAALVEPLLMGVMGSLVAFIVLATFLPVISLISQ 1203
            +RVLD   +VI+G+++APS+ +A  RL++ Y  +++L E +       +    RV  E L++  RQ+A ML+AGI + R LR +  G   +   +   ++  VE G SLS +M   P  F+  ++ +V +GE SGR++  L KLADLQEK V+L+K++++ FAYP+V+G+      ++FVFY++P+M P+F SL V LP  TR+VL     +  P  +G   L+ L     G+ +WR  SRS   RY +  +L  +P+FG L+  +T ARVL+T++TLL++GV L   L ++ +VAGN V S R+  AR AM+ G  V+ S+Q+   FP   LQM++ GEESG L  M+ R++ I+EE+ D  L   A  +EP+++  MG ++ FI LA+F+P++ LIS+
Sbjct:   30 YRVLDRKARVIEGTIEAPSDLMARTRLRQEYASILTLEERQTSEDLR-NLGNRRVSDEDLAVAIRQIATMLSAGIPLARALRLIAAGASGSFKDLFTSMSLQVESGVSLSHSMRRHPGAFDDVFIRIVESGEVSGRMDSVLNKLADLQEKSVRLRKKVIANFAYPSVLGVTALATLSVFVFYVLPLMQPIFHSLGVELPLLTRIVLVLANSIRNPWIIGPFFLMLLALTAAGIVVWRTLSRSQEFRYRVHYALLAVPLFGPLVEKSTVARVLFTLSTLLESGVSLGPALAVVEKVAGNEVLSWRMGQARKAMVAGGGVYESLQVSGAFPDMVLQMIRAGEESGNLDTMMRRVSAIYEEEVDLVLSSMATTLEPIILMGMGVVIGFITLASFMPMVKLISE 428          
BLAST of mRNA_P-wetherbeei_contig11720.1.1 vs. uniprot
Match: A0A7C2LG48_9BACT (Type II secretion system F family protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A7C2LG48_9BACT)

HSP 1 Score: 211 bits (536), Expect = 1.180e-60
Identity = 143/406 (35.22%), Postives = 227/406 (55.91%), Query Frame = 1
Query:    1 MPHFFFRVLDVTDKVIQGSLDAPSESLANERLKKIYKKVISL---REEEIVAGAAVSKKGPRVKLEPLSLYTRQLAVMLNAGISINRVLRFLT-QGEDVNMNLISACLAESVEGGNSLSMAMSEQPRCFNPTYVALVRAGEKSGRLERALLKLADLQEKIVKLKKRMVSTFAYPAVIGLVCALNAALF-VFYIIPIMLPLFSSLNVVLPWPTRVVLWTTEVVHEPVFLGGLALLSLISAVVGLKMWRNSR-SRYWIDLSLTRLPVFGHLITLNTSARVLYTMATLLDAGVGLPDCLVILSEVAGNLVTSERLKNARGAMLDGNSVFRSMQMFDVFPSTALQMLKVGEESGRLSEMVGRIAIIFEEDTDTQLDRFAALVEPLLMGVMGSLVAFIVLATFLPVISLIS 1200
            MP + +R      K  +G + A +E  A  +L +    ++SL   +EE    G   +   PRV  + L++++RQ A M+NAG+S+ R L  L  Q ED  +    A + + VEGG SLS A+S+    F+  Y+++V+AGE  G L+  L +LA+  EK  +LKK++ S   YPA+I L  A+   +F V YI+P  + LF  ++V LP  T+V++   E +  P+ + GL ++ LI A VGL +W  +   R  IDL    +PVFG L      +R   T+ TLL +GV L   L I+++V+GN V    + + R  + +G S+   +    +FP    QM+ VGEE+G L  M+ +IA  ++ + +  L    +L+EP+++  MG +V FIVLA F+P+  LI+
Sbjct:    1 MPVYVYRAKGPDGKESKGEITAKNEMEAKTQLIRQRLTILSLEPKKEESKTLGGIAAFFKPRVNQQALTVFSRQFATMINAGLSLVRALDILAEQSEDKLLKAAIAEVKKDVEGGKSLSAALSKHRHIFSDLYISMVKAGEIGGMLDEVLDRLANFMEKDFQLKKKVQSAMTYPAMI-LFLAIGIVIFLVTYILPTFVNLFKEMDVKLPLLTQVLISVVEALKNPIVVVGLIVV-LIFAGVGLGVWYQTPVGRKQIDLVKLNIPVFGLLNKKVAVSRFARTLGTLLSSGVSLMASLEIVAQVSGNAVIGSAIDSVRARLREGESLSGPLSETGIFPPMVTQMIAVGEETGNLDTMLNKIADFYDTEVEYTLSSLTSLIEPIMIVGMGGIVGFIVLAVFMPLYQLIT 404          
BLAST of mRNA_P-wetherbeei_contig11720.1.1 vs. uniprot
Match: D9QRY6_ACEAZ (Type II secretion system F domain protein n=2 Tax=Acetohalobium TaxID=28186 RepID=D9QRY6_ACEAZ)

HSP 1 Score: 207 bits (527), Expect = 2.280e-59
Identity = 130/401 (32.42%), Postives = 233/401 (58.10%), Query Frame = 1
Query:   10 FFFRVLDVTDKVIQGSLDAPSESLANERLKKIYKKVISLREEEIVAGAAVS-KKGPRVKLEPLSLYTRQLAVMLNAGISINRVLRFL-TQGEDVNMNLISACLAESVEGGNSLSMAMSEQPRCFNPTYVALVRAGEKSGRLERALLKLADLQEKIVKLKKRMVSTFAYPAVIGLVCALNAALFVFYIIPIMLPLFSSLNVVLPWPTRVVLWTTEVVHEPVFLGGLALLSLISAVVGLKMWRNSRSRYWIDLSLTRLPVFGHLITLNTSARVLYTMATLLDAGVGLPDCLVILSEVAGNLVTSERLKNARGAMLDGNSVFRSMQMFDVFPSTALQMLKVGEESGRLSEMVGRIAIIFEEDTDTQLDRFAALVEPLLMGVMGSLVAFIVLATFLPVISLISQF 1206
            F ++V D   + ++G+L+A S  +  +RL+     + S+ EE+  +      K+  +VKL+ L+L+ RQ A M++AG+S+ R L  L  Q  +  +      + E VEGG SLS A+ E+   F   ++++V AGE  G L+  LL++AD  EK  ++K+++ S  AYPAVI LV        V  I+P  + +F+ +N+ LP PTR++L T+ ++    +L   A+L +IS       ++  R +  ID  L +LP+FG LI   + AR   T+ TL+ +GV + + L ++S V  N + +E+L  AR ++  G S+   +Q   +FP   +QM+++GEE+G L +M+ R+A  ++++ + +++   +L+EP L+ ++G +V  IV++  LP+ +++  F
Sbjct:    5 FRYKVRDENGEQLEGALEAESREIVIDRLRNRGYYITSIEEEQESSSLGDKLKQFKKVKLKDLALFCRQFATMIDAGVSLVRALDILGDQTGNPKLREAIRSVQEHVEGGVSLSNALEEEDHVFPRLFISMVEAGETGGILDEVLLEMADHFEKENEMKQQITSALAYPAVITLVAVGVVVFLVTVILPTFVDIFAGMNIQLPLPTRILLTTSNLISSYWYLFVGAVLVVIS--FSYYYYQTDRGKRQIDWLLLKLPLFGDLIIKISVARFSRTLGTLISSGVTILEGLEVVSRVVSNQIVAEQLNEARNSISAGESMADPLQQNGLFPQMVIQMIRIGEETGSLDQMLNRVAQFYDQEVEHKVEGMVSLIEPALILILGLVVGSIVVSMMLPMFNMMQGF 403          
BLAST of mRNA_P-wetherbeei_contig11720.1.1 vs. uniprot
Match: A0A1F2WFL7_9ACTN (Pilus assembly protein PilC n=1 Tax=Candidatus Solincola sediminis TaxID=1797199 RepID=A0A1F2WFL7_9ACTN)

HSP 1 Score: 205 bits (521), Expect = 1.940e-58
Identity = 125/407 (30.71%), Postives = 231/407 (56.76%), Query Frame = 1
Query:    7 HFFFRVLDVTDKVIQGSLDAPSESLANERLKKIYKKVISLREEEIVAGAAVSKKG-----PRVKLEPLSLYTRQLAVMLNAGISINRVLRFLT-QGEDVNMNLISACLAESVEGGNSLSMAMSEQPRCFNPTYVALVRAGEKSGRLERALLKLADLQEKIVKLKKRMVSTFAYPAVIGLVCALNAALFVFYIIPIMLPLFSSLNVVLPWPTRVVLWTTEVVHEPVFLGGLALLSLISAVVGLKMW-RNSRSRYWIDLSLTRLPVFGHLITLNTSARVLYTMATLLDAGVGLPDCLVILSEVAGNLVTSERLKNARGAMLDGNSVFRSMQMFDVFPSTALQMLKVGEESGRLSEMVGRIAIIFEEDTDTQLDRFAALVEPLLMGVMGSLVAFIVLATFLPVISLISQF 1206
            ++ ++V D   K+I G L+A SE++ ++RL+++   ++ + E+++    ++SKK      P++K + ++++TRQ A M+NAG+ + + L  LT Q E      I A +   VE G SLS A+++ P  F   Y ++V+AGE  G L+  LL++A   E   ++++R+ S   YPA +  +  L   + + +++P    +F +L   LP+ T++++  +  V      G   L+ LI   V LK W +  + R  +D    ++PVFG L    + +R   T+ TL+ +GV +   L I S+  GN++ +E + + R  + +G+S+ R +    +FP    QML +GEE+G L  M+ +++  ++ +  + ++   +L+EPLL+  +G +V  IVLA ++P+ SLISQF
Sbjct:    4 NYSYKVRDKQGKIISGKLEADSEAIVSQRLREMGYFIVGIEEQKV----SLSKKEIRLFKPKIKSKDINIFTRQFATMINAGLPLVKCLSILTEQTESPVFTAIIADVQHEVEMGRSLSEALAKHPEAFKDLYTSMVKAGEIGGVLDDVLLRVATTLESEAEIRQRIKSAMTYPAAMFCISILLLIVMIVFVVPTFENMFKNLGASLPFLTKIIMTISHFVAS--IKGVFILIILIVGFVLLKRWIKTPKGRRKLDALKLKIPVFGILFHKMSLSRFSRTLGTLVASGVPILQALEITSKTVGNMLVAEAVDSVRAGVKEGDSIARPLGQSPLFPPMVTQMLAIGEETGALDTMLNKVSEFYDSEVSSTVESLTSLLEPLLIVSLGLVVGIIVLALYMPIFSLISQF 404          
BLAST of mRNA_P-wetherbeei_contig11720.1.1 vs. uniprot
Match: UPI001EF8DCA4 (type II secretion system F family protein n=1 Tax=Sporohalobacter salinus TaxID=1494606 RepID=UPI001EF8DCA4)

HSP 1 Score: 204 bits (518), Expect = 5.950e-58
Identity = 137/405 (33.83%), Postives = 234/405 (57.78%), Query Frame = 1
Query:   10 FFFRVLDVTDKVIQGSLDAPSESLANERLKKIYKKVISLREE-EIVAGAAVSKKGPRVKLEPLSLYTRQLAVMLNAGISINRVLRFLTQGEDVNMNLISAC--LAESVEGGNSLSMAMSEQPRCFNPTYVALVRAGEKSGRLERALLKLADLQEKIVKLKKRMVSTFAYPAVIGLVCALNAALFVFYIIPIMLPLFSSLNVVLPWPTRVVLWTTEVVHEP--VFLG-GLALLSLISAVVGLKMWRNSRSRYWIDLSLTRLPVFGHLITLNTSARVLYTMATLLDAGVGLPDCLVILSEVAGNLVTSERLKNARGAMLDGNSVFRSMQMFDVFPSTALQMLKVGEESGRLSEMVGRIAIIFEEDTDTQLDRFAALVEPLLMGVMGSLVAFIVLATFLPVISLISQF 1206
            F ++  D   + ++G+L+A S+    +RL+     +IS+ E  E      + K+  RVKLE L+++ RQ A M+++G+S+ R L  L+  +  N  L  A   + ESVE G SLS A+ E+   F   ++++V AGE  G L+  LL++AD  EK  ++K++++S  AYPAVI LV        + +++P  +  FSSL+V LP  TR++L T+ ++     V LG GLA++  I        ++    +  IDL L +LP+   LI   + AR   T+ TL+++GV + D L ++S V  N +  E++  AR  +  G S+   ++   +FP   LQM++VGEE+G L +M+ RIA+ ++++ D +++   +L+EP L+ V+G +V  IV++  LP+ ++I  F
Sbjct:   13 FRYKARDENGEQLEGTLEAESKESVADRLRDRGYYIISVEENIERSNLGDILKRFRRVKLEDLAIFCRQFATMIDSGVSLVRSLDILSNQKS-NHKLQEAVNSVQESVESGASLSEALEEENHVFPRLFISMVEAGETGGILDEVLLEMADYFEKENEMKQKIISVLAYPAVITLVAIAAVIFLLTFVLPTFVNTFSSLDVELPLLTRILLETSNLISSYWYVILGIGLAIILPIYYY-----YKTENGKRQIDLLLLKLPLISDLIIKISVARFTRTLGTLIESGVAILDGLEVVSGVVSNQIVVEQINEARNNISAGESMVNPLREGGLFPQMVLQMIRVGEETGSLDQMLNRIALFYDQEVDHKIEGMVSLIEPALILVLGLVVGSIVISIMLPMFNMIQSF 411          
BLAST of mRNA_P-wetherbeei_contig11720.1.1 vs. uniprot
Match: A0A411YJY5_9ACTN (Type II secretion system F family protein n=1 Tax=Egibacter rhizosphaerae TaxID=1670831 RepID=A0A411YJY5_9ACTN)

HSP 1 Score: 201 bits (510), Expect = 9.450e-57
Identity = 121/395 (30.63%), Postives = 229/395 (57.97%), Query Frame = 1
Query:   10 FFFRVLDVTDKVIQGSLDAPSESLANERLKKIYKKVISLREEE---IVAGAAVSKKGPRVKLEPLSLYTRQLAVMLNAGISINRVLRFLT-QGEDVNMNLISACLAESVEGGNSLSMAMSEQPRCFNPTYVALVRAGEKSGRLERALLKLADLQEKIVKLKKRMVSTFAYPAVIGLVCALNAALFVFYIIPIMLPLFSSLNVVLPWPTRVVLWTTEVVHEPVFLGGLALLSLISAVVGLKMWRNSRSRYWIDLSLTRLPVFGHLITLNTSARVLYTMATLLDAGVGLPDCLVILSEVAGNLVTSERLKNARGAMLDGNSVFRSMQMFDVFPSTALQMLKVGEESGRLSEMVGRIAIIFEEDTDTQLDRFAALVEPLLMGVMGSLVAFIVLATFLP 1182
            F + V D + K ++GSLD P +     +L+++    IS+++++   +    ++     R+KL+ L++++RQ A M+N+G+S+ R L  L  Q E+  +  I   +   +E G SLS ++++ P  F   YVA+VRAGE +G L++ LL++A+  EK ++L++++ +   YP V+  +  L  A  + +I+P+ + +F  L   LP PT+++L+ ++++    FL  +  L +++  +  +  ++ + RY +D    ++PVFG L      AR      TLL AGV +   L I ++   N V S+ +K+ + A+ +G SV R +    VFP   +QM+ VGEE+G + EM+ +IA  ++++  T  +   A++EPL++ V+G +V  +V+A ++P
Sbjct:    6 FDYTVRDQSGKTLKGSLDGPDQRAVAAKLREMGYSPISVQQQKSSTLHKEVSIPGLSGRIKLQDLAVFSRQFATMINSGLSLVRALNILAEQTENRKLAEIVGVVRGQIEQGRSLSDSLADHPDVFPKLYVAMVRAGETAGMLDQVLLRVANTLEKDLELRRKIKTALTYPVVVVCLAILLTAAMLIFIVPVFVDMFEDLGGELPLPTQILLFLSDILRSWWFL--ILPLPIVAWQLFKQARKDPKVRYQLDRLKLKVPVFGDLFHKIALARFNRNFGTLLRAGVPILSALEITADTVNNGVISDAVKDVQTAVKEGESVARPLSQHAVFPPMTVQMIAVGEETGAMDEMLEKIADFYDDEVATTTESLTAMLEPLMIMVLGGIVGAMVIALYMP 398          
BLAST of mRNA_P-wetherbeei_contig11720.1.1 vs. uniprot
Match: A0A3A4V801_9ACTN (Type II secretion system F family protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A3A4V801_9ACTN)

HSP 1 Score: 200 bits (509), Expect = 1.170e-56
Identity = 117/406 (28.82%), Postives = 232/406 (57.14%), Query Frame = 1
Query:   10 FFFRVLDVTDKVIQGSLDAPSESLANERLKKIYKKVISLRE-------EEIVAGAAVSKKGPRVKLEPLSLYTRQLAVMLNAGISINRVLRFLT-QGEDVNMNLISACLAESVEGGNSLSMAMSEQPRCFNPTYVALVRAGEKSGRLERALLKLADLQEKIVKLKKRMVSTFAYPAVIGLVCALNAALFVFYIIPIMLPLFSSLNVVLPWPTRVVLWTTEVVHEPVFLGGLALLSLISAVVGLKMW-RNSRSRYWIDLSLTRLPVFGHLITLNTSARVLYTMATLLDAGVGLPDCLVILSEVAGNLVTSERLKNARGAMLDGNSVFRSMQMFDVFPSTALQMLKVGEESGRLSEMVGRIAIIFEEDTDTQLDRFAALVEPLLMGVMGSLVAFIVLATFLPVISLIS 1200
            + ++V D    +I GSL+A ++S   ++L+++   VIS+         EE+++   + +   RVK + L++Y+RQ A M+NAG+ + R L  L  Q ++  +  ++  + + VE G SLS AM++ P+ F+  ++++++AGE  G L+  LL++AD  ++  +LK ++ S  AYP V+  +  + A + + +I+PI   LF SL   +P PT++++  +  +      G +  +  +  V   + + R  +  Y+ D    +LPV G L    + A+   T+ TL+ +G  +   L I+++ AGN + S  +K+AR ++ +G ++ + +   DVFP   +QM+ VGEE+G L  M G+IA  ++ +    ++   +++EPLL+  +G +V  I+++ ++P+ +L++
Sbjct:    5 YTYKVRDKQANIISGSLEAENQSAVADKLRQMGYTVISVSSKTQAPTVEELLSNIPLFQ---RVKSKDLTVYSRQFATMINAGLPLTRCLAILAEQTDNTYLAKVTGIMQKDVEAGQSLSAAMAKHPKAFSTLFISMIKAGEAGGVLDEVLLRIADHMQREAELKSKIKSAMAYPVVMFAITIIIAFIMITFIVPIFQGLFKSLKGTMPLPTQILISISNYMRS--IYGLIFFIGFMGGVFAFRAYKRTDQGAYFWDSLKLKLPVIGSLSKKISLAKFSRTLGTLISSGTPILQALDIVADTAGNEIVSRAIKSARSSIREGETIAKPLSESDVFPPMVIQMISVGEETGALETMCGKIADFYDSEVAATVEALTSIIEPLLIVFLGVVVGGILISLYMPMFNLVN 405          
BLAST of mRNA_P-wetherbeei_contig11720.1.1 vs. uniprot
Match: S0EYL6_CHTCT (Type II secretory pathway, component PulF n=2 Tax=Chthonomonas TaxID=1077265 RepID=S0EYL6_CHTCT)

HSP 1 Score: 199 bits (505), Expect = 4.780e-56
Identity = 130/405 (32.10%), Postives = 222/405 (54.81%), Query Frame = 1
Query:    1 MPHFFFRVLDVTDKVIQGSLDAPSESLANERLKKIYKKVISLREEEIVAGAAVSKKGPRVKLEPLSLYTRQLAVMLNAGISINRVLRFL-TQGEDVNMNLISACLAESVEGGNSLSMAMSEQPRCFNPTYVALVRAGEKSGRLERALLKLADLQEKIVKLKKRMVSTFAYPAVIGLVCALNAALFVFYIIPIMLPLFSSLNVV-LPWPTRVVLWTTEVVHEPVFLGGLALLSLISAVVGLKMWRNSR-SRYWID-LSLTRLPVFGHLITLNTSARVLYTMATLLDAGVGLPDCLVILSEVAGNLVTSERLKNARGAMLDGNSVFRSMQMFDVFPSTALQMLKVGEESGRLSEMVGRIAIIFEEDTDTQLDRFAALVEPLLMGVMGSLVAFIVLATFLPVISLISQ 1203
            MP F + V D T  V  G+ +A SE +   RL++   +V ++++     G        RVKL  ++++ RQ + M++AG+S+ R L  L  Q ++  +  I   +   VEGG++LS AMS+ P  FN  ++ L+RAGE  G LE +L +LA   EK ++L++++ S   YP ++ +V  L       +I+P  + LF  L V  LPW T+V++  +  +    ++G   LL +      +KM   +R  R +ID   ++ +PVF  LI   T AR   T++TLL AGV +   +  ++   GN++ S+ +  AR  + +G  +   ++   +FP   + M+ +GEESG L  M+ ++A  +E + D QL    A +EP+++  +G  V FIV+A F+P+I ++S 
Sbjct:    1 MPIFQYTVSDATGNVRTGTSEAESEEILTRRLQEQGFRVTTIKKTGKTKGTTSGTGFGRVKLRDVAIFCRQFSTMIDAGVSLVRTLDVLGEQTQNPKLRRIIKEVQVEVEGGSTLSKAMSKYPAVFNNLFIGLIRAGEVGGVLEESLQRLAHFLEKDMELRRKVKSALTYPTIVVIVAVLIVLGLTTFIVPKFIDLFKDLGVKELPWMTQVLVDFSNFLKSKWYIG---LLIIFLVWFSIKMLGRTRPGRRFIDRFKISWIPVFSKLIHKVTLARFARTLSTLLSAGVPILQAMETVAGAVGNVIVSDAIMAARARIREGERIKDPLEKSRLFPPMVVHMISIGEESGSLDHMLTKVADFYEGEVDAQLQSLTAAIEPIMIVFLGFCVGFIVIALFMPLIQVVSN 402          
BLAST of mRNA_P-wetherbeei_contig11720.1.1 vs. uniprot
Match: A0A538IED4_9ACTN (Type II secretion system F family protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538IED4_9ACTN)

HSP 1 Score: 198 bits (503), Expect = 8.320e-56
Identity = 126/406 (31.03%), Postives = 234/406 (57.64%), Query Frame = 1
Query:   10 FFFRVLDVTDKVIQGSLDAPSESLANERLKKIYKKVISLREEEIVAGAAVSKK------GPRVKLEPLSLYTRQLAVMLNAGISINRVLRFLT-QGEDVNMNLISACLAESVEGGNSLSMAMSEQPRCFNPTYVALVRAGEKSGRLERALLKLADLQEKIVKLKKRMVSTFAYPAVI-GLVCALNAALFVFYIIPIMLPLFSSLNVVLPWPTRVVLWTTEVVHEPVFLGGLALLSLISAVVGLKMW-RNSRSRYWIDLSLTRLPVFGHLITLNTSARVLYTMATLLDAGVGLPDCLVILSEVAGNLVTSERLKNARGAMLDGNSVFRSMQMFDVFPSTALQMLKVGEESGRLSEMVGRIAIIFEEDTDTQLDRFAALVEPLLMGVMGSLVAFIVLATFLPVISLIS 1200
            + ++V D   K++QG+++A SE+    RL+++    + + E +   G    KK      G +VK + +++ +RQ A M+N+G+S+ R L  L  Q ++  +  + + +   VE G SLS A+++ P+ F+  YVA+++AGE  G L++ LL++A+  EK V L+ ++ S   YP V+ GLV  + +A+ +F ++P+   L++ L   LP PTRV++  ++ + +  F+    L   I +VVG + W +  + R   D    +LPVFG L+     +R   T+A L  +GV +   L I+ E   N V +E +   + ++ +G S+ + ++   +FP   +QM+ VGEE+G L  M+ +IA  ++++ D  ++   +L+EPLL+ VMG  V  +V+A ++P+ ++I+
Sbjct:    5 YAYKVRDRAGKIVQGTVEAESETAVVGRLRQMGLAPLLIEEHKETLG----KKELHFPWGNKVKPKDIAVMSRQFATMINSGLSLLRALNILAEQTDNTRLAGVLSAVRSDVEKGQSLSQALAKHPKVFSRLYVAMIKAGETGGVLDKTLLRMAETMEKEVALRHKIKSAMTYPVVVFGLVIIIVSAMLLF-VVPMFKNLYTQLGGTLPLPTRVLILLSDFIKKAWFIW---LPGSIGSVVGFRKWIQTDKGRAKWDAIKLKLPVFGTLVHKTALSRYSRTLAALFRSGVPILQGLDIVKETVNNAVMAEAVTEVQLSVKEGASIAKPLEAHAIFPPMVVQMMMVGEETGALDTMLEKIADFYDQEVDATVEALTSLIEPLLIAVMGVAVGGMVVALYMPMFNIIN 402          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11720.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7Z9PT42_9BACT6.800e-12046.91Type II secretion system F family protein n=1 Tax=... [more]
A0A7X9AF44_9BURK2.090e-8839.75Type II secretion system F family protein n=1 Tax=... [more]
A0A7C2LG48_9BACT1.180e-6035.22Type II secretion system F family protein n=1 Tax=... [more]
D9QRY6_ACEAZ2.280e-5932.42Type II secretion system F domain protein n=2 Tax=... [more]
A0A1F2WFL7_9ACTN1.940e-5830.71Pilus assembly protein PilC n=1 Tax=Candidatus Sol... [more]
UPI001EF8DCA45.950e-5833.83type II secretion system F family protein n=1 Tax=... [more]
A0A411YJY5_9ACTN9.450e-5730.63Type II secretion system F family protein n=1 Tax=... [more]
A0A3A4V801_9ACTN1.170e-5628.82Type II secretion system F family protein n=1 Tax=... [more]
S0EYL6_CHTCT4.780e-5632.10Type II secretory pathway, component PulF n=2 Tax=... [more]
A0A538IED4_9ACTN8.320e-5631.03Type II secretion system F family protein n=1 Tax=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11720contigP-wetherbeei_contig11720:255..1463 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog574087.Acear_1772
PFAMsT2SSF
Model size1209
Max annot lvl186801|Clostridia
KEGG koko:K02653
KEGG TC3.A.15.2
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.74e-60
EggNOG OGsCOG1459@1|root,COG1459@2|Bacteria,1TQRZ@1239|Firmicutes,249FV@186801|Clostridia,3WAFC@53433|Halanaerobiales
DescriptionPFAM Bacterial type II secretion system protein F domain
Cds size1209
COG categoryU
BRITEko00000,ko02035,ko02044
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185923.9386787-CDS-P-wetherbeei_contig11720:254..14631683185923.9386787-CDS-P-wetherbeei_contig11720:254..1463Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11720 255..1463 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11720.1.1prot_P-wetherbeei_contig11720.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig11720 255..1463 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig11720.1.1

>prot_P-wetherbeei_contig11720.1.1 ID=prot_P-wetherbeei_contig11720.1.1|Name=mRNA_P-wetherbeei_contig11720.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=403bp
MPHFFFRVLDVTDKVIQGSLDAPSESLANERLKKIYKKVISLREEEIVAG
AAVSKKGPRVKLEPLSLYTRQLAVMLNAGISINRVLRFLTQGEDVNMNLI
SACLAESVEGGNSLSMAMSEQPRCFNPTYVALVRAGEKSGRLERALLKLA
DLQEKIVKLKKRMVSTFAYPAVIGLVCALNAALFVFYIIPIMLPLFSSLN
VVLPWPTRVVLWTTEVVHEPVFLGGLALLSLISAVVGLKMWRNSRSRYWI
DLSLTRLPVFGHLITLNTSARVLYTMATLLDAGVGLPDCLVILSEVAGNL
VTSERLKNARGAMLDGNSVFRSMQMFDVFPSTALQMLKVGEESGRLSEMV
GRIAIIFEEDTDTQLDRFAALVEPLLMGVMGSLVAFIVLATFLPVISLIS
QF*
back to top

mRNA from alignment at P-wetherbeei_contig11720:255..1463+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig11720.1.1 ID=mRNA_P-wetherbeei_contig11720.1.1|Name=mRNA_P-wetherbeei_contig11720.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1209bp|location=Sequence derived from alignment at P-wetherbeei_contig11720:255..1463+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCCGCACTTCTTCTTCCGCGTTCTAGATGTCACGGACAAGGTGATTCA GGGTTCCCTGGATGCTCCGAGCGAGAGCTTGGCCAACGAGAGACTCAAAA AGATCTACAAAAAGGTCATCTCATTGCGCGAGGAGGAAATCGTCGCCGGA GCGGCCGTTTCCAAGAAAGGTCCTCGGGTCAAGCTTGAGCCCCTTTCGCT TTACACTCGGCAACTCGCGGTCATGTTGAATGCGGGTATCAGTATCAATC GAGTCCTGCGCTTTTTGACCCAGGGCGAAGACGTGAATATGAATCTCATC TCGGCCTGCTTGGCCGAGTCCGTCGAAGGTGGCAATTCGCTCTCGATGGC GATGTCCGAGCAGCCTCGCTGCTTCAACCCGACCTACGTTGCTCTTGTGA GAGCGGGAGAAAAATCGGGACGTCTCGAGCGAGCTCTTCTCAAACTCGCC GACCTTCAAGAAAAAATCGTCAAGCTGAAGAAGCGAATGGTCTCCACCTT CGCCTACCCGGCTGTTATCGGACTGGTTTGCGCTCTCAATGCGGCACTCT TCGTCTTCTACATCATTCCAATCATGCTACCGCTCTTCAGTTCACTCAAT GTCGTCCTGCCCTGGCCGACTCGTGTCGTCTTATGGACCACGGAAGTTGT GCACGAGCCTGTATTTCTCGGCGGCCTGGCCTTGCTGTCCCTGATCTCTG CGGTCGTAGGCCTGAAAATGTGGCGAAATAGTCGCAGCCGATACTGGATC GATCTGAGCCTCACCCGTTTGCCTGTCTTCGGCCATCTCATCACGTTGAA TACTTCAGCACGCGTTCTCTACACCATGGCGACCCTGCTCGACGCCGGCG TAGGACTGCCCGACTGCCTTGTCATCTTATCCGAAGTGGCGGGCAATTTA GTTACCTCCGAACGTCTCAAGAACGCTCGAGGGGCGATGCTGGACGGCAA CAGCGTTTTCCGCTCGATGCAGATGTTTGATGTCTTTCCCAGTACTGCAC TTCAAATGCTGAAGGTTGGGGAAGAGAGCGGACGACTTAGCGAGATGGTC GGGCGCATCGCGATCATCTTCGAGGAGGATACGGACACCCAACTAGATCG TTTCGCTGCTCTCGTGGAACCGCTCCTGATGGGAGTAATGGGCTCGTTGG TCGCGTTCATCGTTCTCGCGACGTTTTTACCAGTGATCAGTCTCATCAGC CAGTTCTAA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig11720:255..1463+

>mRNA_P-wetherbeei_contig11720.1.1 ID=mRNA_P-wetherbeei_contig11720.1.1|Name=mRNA_P-wetherbeei_contig11720.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1209bp|location=Sequence derived from alignment at P-wetherbeei_contig11720:255..1463+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCCGCACTTCTTCTTCCGCGTTCTAGATGTCACGGACAAGGTGATTCA
GGGTTCCCTGGATGCTCCGAGCGAGAGCTTGGCCAACGAGAGACTCAAAA
AGATCTACAAAAAGGTCATCTCATTGCGCGAGGAGGAAATCGTCGCCGGA
GCGGCCGTTTCCAAGAAAGGTCCTCGGGTCAAGCTTGAGCCCCTTTCGCT
TTACACTCGGCAACTCGCGGTCATGTTGAATGCGGGTATCAGTATCAATC
GAGTCCTGCGCTTTTTGACCCAGGGCGAAGACGTGAATATGAATCTCATC
TCGGCCTGCTTGGCCGAGTCCGTCGAAGGTGGCAATTCGCTCTCGATGGC
GATGTCCGAGCAGCCTCGCTGCTTCAACCCGACCTACGTTGCTCTTGTGA
GAGCGGGAGAAAAATCGGGACGTCTCGAGCGAGCTCTTCTCAAACTCGCC
GACCTTCAAGAAAAAATCGTCAAGCTGAAGAAGCGAATGGTCTCCACCTT
CGCCTACCCGGCTGTTATCGGACTGGTTTGCGCTCTCAATGCGGCACTCT
TCGTCTTCTACATCATTCCAATCATGCTACCGCTCTTCAGTTCACTCAAT
GTCGTCCTGCCCTGGCCGACTCGTGTCGTCTTATGGACCACGGAAGTTGT
GCACGAGCCTGTATTTCTCGGCGGCCTGGCCTTGCTGTCCCTGATCTCTG
CGGTCGTAGGCCTGAAAATGTGGCGAAATAGTCGCAGCCGATACTGGATC
GATCTGAGCCTCACCCGTTTGCCTGTCTTCGGCCATCTCATCACGTTGAA
TACTTCAGCACGCGTTCTCTACACCATGGCGACCCTGCTCGACGCCGGCG
TAGGACTGCCCGACTGCCTTGTCATCTTATCCGAAGTGGCGGGCAATTTA
GTTACCTCCGAACGTCTCAAGAACGCTCGAGGGGCGATGCTGGACGGCAA
CAGCGTTTTCCGCTCGATGCAGATGTTTGATGTCTTTCCCAGTACTGCAC
TTCAAATGCTGAAGGTTGGGGAAGAGAGCGGACGACTTAGCGAGATGGTC
GGGCGCATCGCGATCATCTTCGAGGAGGATACGGACACCCAACTAGATCG
TTTCGCTGCTCTCGTGGAACCGCTCCTGATGGGAGTAATGGGCTCGTTGG
TCGCGTTCATCGTTCTCGCGACGTTTTTACCAGTGATCAGTCTCATCAGC
CAGTTCTAA
back to top