mRNA_P-wetherbeei_contig11705.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig11705.1.2 vs. uniprot
Match: D7G5L0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5L0_ECTSI) HSP 1 Score: 271 bits (694), Expect = 1.290e-82 Identity = 136/199 (68.34%), Postives = 154/199 (77.39%), Query Frame = 3 Query: 327 VHSLLAASCGKQICCGGQHAAVLTDTGEVYTWGKGGFGRLGHGNDDASVEPRRVEALVGRTCVQVACGFAYTAAVTASGELYTWGAAENGRLGLGDSVDRMSPCHVEALQERVKQVYAGSVHTCVLTRCGAVVSFGKHEYTGHGADADVLLPLPINDVFGGSPVRPVRHISVGPGGYHTIAVTEKGEVFTWGHNRVGQV 923 V LL S +Q+CCGGQHAAVLTD GE++TWG+GGFGRLGHGN + PRR+EAL G CVQVACGFAYTAAVTASGELYTWGA ENGRLGLGD DR +P VE L +VK+VYAGSVH+CVLTR G V +FGKHEYTGHG DVL P I GGS VR ISVGPGGYHT+A+T +G+V+ WGHNRV Q+ Sbjct: 265 VQGLLGLSV-QQVCCGGQHAAVLTDCGEIFTWGRGGFGRLGHGNREGLESPRRIEALEGIPCVQVACGFAYTAAVTASGELYTWGAGENGRLGLGDVADRHTPSRVEGLHSKVKEVYAGSVHSCVLTREGTVYAFGKHEYTGHGDHEDVLDPRLIPTFSGGSGAL-VRQISVGPGGYHTMALTCQGQVYAWGHNRVAQL 461
BLAST of mRNA_P-wetherbeei_contig11705.1.2 vs. uniprot
Match: A0A6H5JJV9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV9_9PHAE) HSP 1 Score: 269 bits (688), Expect = 4.160e-79 Identity = 134/199 (67.34%), Postives = 154/199 (77.39%), Query Frame = 3 Query: 327 VHSLLAASCGKQICCGGQHAAVLTDTGEVYTWGKGGFGRLGHGNDDASVEPRRVEALVGRTCVQVACGFAYTAAVTASGELYTWGAAENGRLGLGDSVDRMSPCHVEALQERVKQVYAGSVHTCVLTRCGAVVSFGKHEYTGHGADADVLLPLPINDVFGGSPVRPVRHISVGPGGYHTIAVTEKGEVFTWGHNRVGQV 923 V LL S +Q+CCGGQHAAVLTD G+++TWG+GGFGRLGHGN + PRR++AL G C QVACGFAYTAAVTASGELYTWGA ENGRLGLGD VDR +P VE L +VK+VYAGSVH+CVLTR G V +FGKHEYTGHG DVL P I GGS VR ISVGPGGYHT+A+T +G+V+ WGHNRV Q+ Sbjct: 652 VQGLLGLSV-QQVCCGGQHAAVLTDCGDIFTWGRGGFGRLGHGNREGLESPRRIQALEGIPCAQVACGFAYTAAVTASGELYTWGAGENGRLGLGDVVDRHTPSRVEGLHSKVKEVYAGSVHSCVLTREGTVYAFGKHEYTGHGDHEDVLDPRLIPTFSGGSGAL-VRQISVGPGGYHTMALTCQGQVYAWGHNRVAQL 848
BLAST of mRNA_P-wetherbeei_contig11705.1.2 vs. uniprot
Match: A0A7S2HV15_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HV15_9STRA) HSP 1 Score: 254 bits (648), Expect = 1.270e-75 Identity = 137/226 (60.62%), Postives = 156/226 (69.03%), Query Frame = 3 Query: 249 CKAGRSI*LTNCLCHHDSLDLCRVGGVHSLLAASCGKQICCGGQHAAVLTDTGEVYTWGKGGFGRLGHGNDDASVEPRRVEALVGRTCVQVACGFAYTAAVTASGELYTWGAAENGRLGLGDSVDRMSPCHVEALQE-RVKQVYAGSVHTCVLTRCGAVVSFGKHEYTGHGADADVLLPLPINDVFGGSPVRPVRHISVGPGGYHTIAVTEKGEVFTWGHNRVGQV 923 C R + + + S+ + R V LL S QICCGGQHAAVLT GEVYTWG+GGFGRLGHGN + P +V AL C QVACGFAYTA VT G LYTWGA ENGRLGLGDS DR P VE L + ++QV+AGSVHTCVL+R G V S GKHEYTGHGA DVLLP I D+F G + ++ ISVGPGGYHTIA+T EVFTWGHNRVGQ+ Sbjct: 250 CDPARVVYVMGTVEDDTSMVVARPTMVQGLLGLSIA-QICCGGQHAAVLTSFGEVYTWGRGGFGRLGHGNTETLTTPNKVTALDSIVCSQVACGFAYTAVVTTEGALYTWGAGENGRLGLGDSEDRCIPSQVEDLSDIPIEQVFAGSVHTCVLSRTGHVYSCGKHEYTGHGATEDVLLPR-ILDIFQG---KLIKQISVGPGGYHTIALTIDREVFTWGHNRVGQL 470
BLAST of mRNA_P-wetherbeei_contig11705.1.2 vs. uniprot
Match: A0A7S2FHZ6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FHZ6_9STRA) HSP 1 Score: 251 bits (640), Expect = 5.240e-74 Identity = 126/190 (66.32%), Postives = 143/190 (75.26%), Query Frame = 3 Query: 357 KQICCGGQHAAVLTDTGEVYTWGKGGFGRLGHGNDDASVEPRRVEALVGRTCVQVACGFAYTAAVTASGELYTWGAAENGRLGLGDSVDRMSPCHVEALQ-ERVKQVYAGSVHTCVLTRCGAVVSFGKHEYTGHGADADVLLPLPINDVFGGSPVRPVRHISVGPGGYHTIAVTEKGEVFTWGHNRVGQV 923 QICCGGQHAA+LT GEVYTWG+GGFGRLGHG+ + +P+ V AL G C QVACGFAYTA VT G LYTWGA ENGRLGLGD DR P HVE + ++QV+AGSVHTCVLTR G V SFGKHEYTGHG DVLLP + DVF G + ++ ISVGPGGYHTIA+T V+TWGHNRVGQ+ Sbjct: 356 SQICCGGQHAAILTAFGEVYTWGRGGFGRLGHGDTQSLSDPKFVSALEGIKCCQVACGFAYTAVVTTEGALYTWGAGENGRLGLGDVEDRHVPSHVEDMSLTPIQQVFAGSVHTCVLTRPGQVYSFGKHEYTGHGCTEDVLLPR-LLDVFDG---KTIKQISVGPGGYHTIALTTDRGVYTWGHNRVGQL 541
BLAST of mRNA_P-wetherbeei_contig11705.1.2 vs. uniprot
Match: A0A7S1XMC2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XMC2_9STRA) HSP 1 Score: 244 bits (624), Expect = 3.270e-73 Identity = 123/190 (64.74%), Postives = 144/190 (75.79%), Query Frame = 3 Query: 360 QICCGGQHAAVLTDTGEVYTWGKGGFGRLGHGNDDASVEPR--RVEALVGRTCVQVACGFAYTAAVTASGELYTWGAAENGRLGLGDSVDRMSPCHVEALQERVKQVYAGSVHTCVLTRCGAVVSFGKHEYTGHGADADVLLPLPINDVFGGSPVRPVRHISVGPGGYHTIAVTEKGEVFTWGHNRVGQV 923 Q+ CGGQHA LT+ G +YTWG+GGFGRLGHG+ PR R E L CVQVACGFAYTAA+TA G LYTWGA ENGRLG+GD DR +P V+ +Q RVK+V+AGSVHTC+LT G ++S GKHEYTGHG DVL PLP++D FGG+ V+ ISVGPGGYHTIA+T G VFTWGHNRVGQ+ Sbjct: 92 QVSCGGQHATALTEDGRIYTWGRGGFGRLGHGDGRDVAAPRLVRSEPLRRERCVQVACGFAYTAAITAGGALYTWGAGENGRLGVGDDQDRYAPTLVKIVQ-RVKEVFAGSVHTCILTLEGVMMSCGKHEYTGHGLTEDVLWPLPLDDAFGGAAVK---RISVGPGGYHTIALTSSG-VFTWGHNRVGQL 276
BLAST of mRNA_P-wetherbeei_contig11705.1.2 vs. uniprot
Match: W7TK43_9STRA (Regulator of chromosome condensation-like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TK43_9STRA) HSP 1 Score: 237 bits (604), Expect = 3.040e-71 Identity = 117/191 (61.26%), Postives = 142/191 (74.35%), Query Frame = 3 Query: 360 QICCGGQHAAVLTDTGEVYTWGKGGFGRLGHGNDDASVEPRRVEALVGR--TCVQVACGFAYTAAVTASGELYTWGAAENGRLGLGDSVDRMSPCHVEALQER-VKQVYAGSVHTCVLTRCGAVVSFGKHEYTGHGADADVLLPLPINDVFGGSPVRPVRHISVGPGGYHTIAVTEKGEVFTWGHNRVGQV 923 Q+CCGGQHAA+LT++G VYTWG+GGFGRLGHG+D P+RV+AL C QVACGFAYTAAVT G++YTWGA ENGRLGLGD +D+M P HV+ L VK+++AGSVHTC L G + S+GK EYTGHG DVL PL + D F G + +SVGPGGYHTI ++ GEV+TWGHNRVGQ+ Sbjct: 12 QVCCGGQHAAILTESGHVYTWGRGGFGRLGHGDDALQATPKRVDALALEHVKCKQVACGFAYTAAVTMEGQVYTWGAGENGRLGLGDELDKMRPGHVKDLARYPVKEIFAGSVHTCALLEDGRIFSWGKCEYTGHGLQQDVLSPLHL-DAFQG---QLFAQVSVGPGGYHTITLSTTGEVYTWGHNRVGQL 198
BLAST of mRNA_P-wetherbeei_contig11705.1.2 vs. uniprot
Match: A0A7S4E565_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E565_9STRA) HSP 1 Score: 240 bits (613), Expect = 9.380e-71 Identity = 124/193 (64.25%), Postives = 139/193 (72.02%), Query Frame = 3 Query: 363 ICCGGQHAAVLTDTGEVYTWGKGGFGRLGHGNDDASVEPRRVEA-LVGRTCVQVACGFAYTAAVTASGELYTWGAAENGRLGLGDSVDRMSPCHVEALQER--VKQVYAGSVHTCVLTRCGAVVSFGKHEYTGHGADADVLLPLPINDVFGGSPVRPVRHISVGPGGYHTIAVTEKGEVFTWGHNRVGQVRQA 932 +CCGGQHAAVLT G+VYTWG+GGFGRLGHG+ + PR V L G C QVACGFAYTAAV+ G LYTWGA ENGRLGLGD DR P VEAL R +++V AGSVHTC L G SFGKHEYTGHGA ADVL P P+ FGG R VR ISVGPGGYHT+A+ +V+TWGHNRVGQ+ A Sbjct: 259 VCCGGQHAAVLTRDGDVYTWGRGGFGRLGHGDVRSLKAPRLVRGGLAGVVCAQVACGFAYTAAVSRDGALYTWGAGENGRLGLGDVDDRHEPSLVEALWPRRPLRRVNAGSVHTCALGVDGVAYSFGKHEYTGHGAAADVLAPRPLAGAFGG---RAVREISVGPGGYHTVALVSPSDVYTWGHNRVGQLGYA 448
BLAST of mRNA_P-wetherbeei_contig11705.1.2 vs. uniprot
Match: A0A4D9CRE3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CRE3_9STRA) HSP 1 Score: 237 bits (605), Expect = 2.100e-68 Identity = 117/191 (61.26%), Postives = 142/191 (74.35%), Query Frame = 3 Query: 360 QICCGGQHAAVLTDTGEVYTWGKGGFGRLGHGNDDASVEPRRVEALVGR--TCVQVACGFAYTAAVTASGELYTWGAAENGRLGLGDSVDRMSPCHVEALQER-VKQVYAGSVHTCVLTRCGAVVSFGKHEYTGHGADADVLLPLPINDVFGGSPVRPVRHISVGPGGYHTIAVTEKGEVFTWGHNRVGQV 923 Q+CCGGQHAA+LT++G VYTWG+GGFGRLGHG+D P+RV+AL C QVACGFAYTAAVT G++YTWGA ENGRLGLGD +D+M P HV+ L VK+++AGSVHTC L G + S+GK EYTGHG DVL PL + D F G + +SVGPGGYHTI ++ GEV+TWGHNRVGQ+ Sbjct: 434 QVCCGGQHAAILTESGHVYTWGRGGFGRLGHGDDALQATPKRVDALALEHVKCKQVACGFAYTAAVTTEGQVYTWGAGENGRLGLGDELDKMRPGHVKDLARYPVKEIFAGSVHTCALLEDGRIFSWGKCEYTGHGLQQDVLSPLHL-DAFQG---QLFAQVSVGPGGYHTITLSTTGEVYTWGHNRVGQL 620
BLAST of mRNA_P-wetherbeei_contig11705.1.2 vs. uniprot
Match: A0A7S3ZR83_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZR83_9STRA) HSP 1 Score: 215 bits (547), Expect = 2.390e-62 Identity = 113/173 (65.32%), Postives = 125/173 (72.25%), Query Frame = 3 Query: 363 ICCGGQHAAVLTDTGEVYTWGKGGFGRLGHGNDDASVEPRRVEA-LVGRTCVQVACGFAYTAAVTASGELYTWGAAENGRLGLGDSVDRMSPCHVEALQER--VKQVYAGSVHTCVLTRCGAVVSFGKHEYTGHGADADVLLPLPINDVFGGSPVRPVRHISVGPGGYHTIAV 872 +CCGGQHAAVLT G+VYTWG+GGFGRLGHG+ + PR V L G C QVACGFAYTAAV+ G LYTWGA ENGRLGLGD DR P VEAL R +++V AGSVHTC L G SFGKHEYTGHGA ADVL P P+ FGG R VR ISVGPGGYHT+A+ Sbjct: 259 VCCGGQHAAVLTRDGDVYTWGRGGFGRLGHGDVRSLKAPRLVRGGLAGVVCAQVACGFAYTAAVSRDGALYTWGAGENGRLGLGDVDDRHEPSLVEALWPRRPLRRVNAGSVHTCALGVDGVAYSFGKHEYTGHGAAADVLAPRPLAGAFGG---RAVREISVGPGGYHTVAL 428
BLAST of mRNA_P-wetherbeei_contig11705.1.2 vs. uniprot
Match: A0A7S3Y9A0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y9A0_HETAK) HSP 1 Score: 196 bits (497), Expect = 5.270e-59 Identity = 104/153 (67.97%), Postives = 115/153 (75.16%), Query Frame = 3 Query: 357 KQICCGGQHAAVLTDTGEVYTWGKGGFGRLGHGNDDASVEPRRVEALV-GRT-CVQVACGFAYTAAVTASGELYTWGAAENGRLGLGDSVDRMSPCHVEALQ-ERVKQVYAGSVHTCVLTRCGAVVSFGKHEYTGHGADADVLLPLPINDVFG 806 KQ+CCGGQHAAVLT GEV+TWG+GGFGRLGHG+ EPRRV AL GR CVQVACGFAYT AV+A+G LYTWGA ENGRLGLGD DR+SP V AL V+ VYAGSVHTCVL G V + GKHEYTGH A DVLLP + + FG Sbjct: 13 KQVCCGGQHAAVLTARGEVFTWGRGGFGRLGHGDAAPQKEPRRVAALARGRVHCVQVACGFAYTCAVSAAGALYTWGAGENGRLGLGDPEDRLSPARVAALAGTAVRAVYAGSVHTCVLAVDGQVYACGKHEYTGHQAAEDVLLPRRV-EAFG 164 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11705.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig11705.1.2 >prot_P-wetherbeei_contig11705.1.2 ID=prot_P-wetherbeei_contig11705.1.2|Name=mRNA_P-wetherbeei_contig11705.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=103bp MSPCHVEALQERVKQVYAGSVHTCVLTRCGAVVSFGKHEYTGHGADADVLback to top mRNA from alignment at P-wetherbeei_contig11705:110..1821+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig11705.1.2 ID=mRNA_P-wetherbeei_contig11705.1.2|Name=mRNA_P-wetherbeei_contig11705.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1712bp|location=Sequence derived from alignment at P-wetherbeei_contig11705:110..1821+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig11705:110..1821+ >mRNA_P-wetherbeei_contig11705.1.2 ID=mRNA_P-wetherbeei_contig11705.1.2|Name=mRNA_P-wetherbeei_contig11705.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=309bp|location=Sequence derived from alignment at P-wetherbeei_contig11705:110..1821+ (Phaeothamnion wetherbeei SAG_119_79)back to top |