mRNA_P-wetherbeei_contig11666.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig11666.1.2
Unique NamemRNA_P-wetherbeei_contig11666.1.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig11666.1.2 vs. uniprot
Match: D7FNT8_ECTSI (Exportin-T n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNT8_ECTSI)

HSP 1 Score: 301 bits (772), Expect = 1.190e-89
Identity = 180/394 (45.69%), Postives = 231/394 (58.63%), Query Frame = 1
Query:    1 GVGSGRGFMALHHVPQLLAVLYRRMRYPLDFSFDASDEDEGEEEMLRSQLRKAYVNIGRACPEATLQFLCAALQALPAPPGQLPWPDAEAALRLIHHYSEACAG--------------------ATGGARLLKEGAFPQVVLALHGSDIASHPHPQVLMLYYELTVRYSKILRSSTRLAALAPVMDALCGPRGLLHPNRQLRTRCCYFLTKLTRQLGTEMRDYVDTAVPGIQALLAAHAD--FGLGEDACLNLYETMGVLIGMQGVEPAKQLRYLEGILGPQFAEVRRLLAILEAAARTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAVIANVSKGFNKP--QDTLTPIFAQVMEATGAAVLAMPQHEALRAKTLFLIH 1110
            G G GR F A+ H+PQLLA LY+RM+YP DF+FD SDEDEGEE+MLR QLRK  VN  R  PE  L+F+C AL +LP P   LP+PD EAALRLI H+ E C G                    A G A LL+ GAFPQ+VLALH SD+A H HPQV+MLY++LTVRYSK+L        +  V++A+CGP+GL + +  LRTR CYFLTKL + +   +  YVD  VPG+QALL +       L ++A LNLYET+G L+GM  V   KQ++ L+G+LGPQ   +RR+   L+ AA  G                                         V  +ANVSKGF KP     +   F Q +EA  +A+++ P+H ALRAKT+FL+H
Sbjct:  394 GGGVGRLFRAMDHLPQLLATLYQRMKYPPDFAFDPSDEDEGEEDMLRQQLRKHLVNAIRNAPETVLEFICRALSSLPTPLSGLPFPDLEAALRLIFHFGEGCGGVSVLNSSXXXXXXXXXXXPAAPGAAELLRSGAFPQMVLALHDSDVARHKHPQVVMLYFQLTVRYSKMLADGPP-HLIPKVLEAICGPQGLSNADVTLRTRSCYFLTKLVKAMKEGVVPYVDVIVPGVQALLDSPQGNPMDLSDEAKLNLYETIGFLVGMPTVPVPKQVQLLDGVLGPQ---MRRIAENLQRAASAGAGGGAGLVGEGEKGGDDAIGAELAAG---------------VGAMANVSKGF-KPVVAAEVEARFFQALEAATSALMSFPRHVALRAKTMFLVH 767          
BLAST of mRNA_P-wetherbeei_contig11666.1.2 vs. uniprot
Match: A0A836CAL0_9STRA (Exportin-T n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAL0_9STRA)

HSP 1 Score: 295 bits (756), Expect = 7.230e-88
Identity = 167/369 (45.26%), Postives = 218/369 (59.08%), Query Frame = 1
Query:   22 FMALHHVPQLLAVLYRRMRYPLDFSFDASDEDEGEEEMLRSQLRKAYVNIGRACPEATLQFLCAALQALPAPPGQLPWPDAEAALRLIHHYSEACAGATGGAR---LLKEGAFPQVVLALHGSDIASHPHPQVLMLYYELTVRYSKILRSSTRLAALAP-VMDALCGPRGLLHPNRQLRTRCCYFLTKLTRQLGTEMRDYVDTAVPGIQALLAAHADFGL-GEDACLNLYETMGVLIGMQGVEPAKQLRYLEGILGPQFAEVRRLLAILEAAARTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAVIANVSKGFNKPQDTLTPIFAQVMEATGAAVLAMPQHEALRAKTLFLIHR 1113
            F A+ H P+LL+V+Y RM++P DF FDA DE++GEEE LR  LRK  VN  RA PE  L+F C AL ALP+P   LPWP AEAALRL++H+SE CA A   A    LL EGAFPQ+V ALH SDIA HPHPQVL+LY+++ VRY K+LR     A L P V++ALC  RGL + +R +R R  Y L++L + L  +M  YV+  VP + ALL + A  GL  +++ LNLYET+G L+GM  V   +++ YLEG+L P  A V   LA  +A A+                                           +A +ANVSKGF KP       F Q +EA  A +LA+P H  +RA+ +FL+HR
Sbjct:  409 FNAMDHAPRLLSVVYARMQFPADFEFDAEDEEDGEEEALRGALRKVLVNTCRAAPELVLRFACEALSALPSPLSALPWPAAEAALRLLYHFSEGCASAAAAANAQALLHEGAFPQMVAALHRSDIARHPHPQVLILYFDIAVRYVKVLRGGG--AELTPLVLEALCSERGLSNASRLVRARAAYNLSRLVKALAGDMVPYVEAVVPAVAALLRSGASQGLLSDESVLNLYETLGCLVGMPAVPAERRVAYLEGVLAPLLARVHEALAQPQAIAQD-------------------------------PEAAGAALAFCLAGLANVSKGFTKPLPEAVAPFTQELEAAAAVLLALPDHPGVRARAIFLVHR 744          
BLAST of mRNA_P-wetherbeei_contig11666.1.2 vs. uniprot
Match: A0A7S4M7Y7_9STRA (Exportin-T (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4M7Y7_9STRA)

HSP 1 Score: 229 bits (583), Expect = 5.750e-65
Identity = 131/360 (36.39%), Postives = 197/360 (54.72%), Query Frame = 1
Query:   22 FMALHHVPQLLAVLYRRMRYPLDFSFDASDEDEGEEEMLRSQLRKAYVNIGRACPEATLQFLCAALQA-LPAPPGQLPWPDAEAALRLIHHYSEACAGATGGARLLKEGAFPQVVLALHGSDIASHPHPQVLMLYYELTVRYSKILRSSTRLAALAPVMDALCGPRGLLHPNRQLRTRCCYFLTKLTRQLGTEMRDYVDTAVPGIQALLAAHADFG--LGEDACLNLYETMGVLIGMQGVEPAKQLRYLEGILGPQFAEVRRLLAILEAAARTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAVIANVSKGFNKPQDTLTPIFAQVMEATGAAVLAMPQHEALRAK 1092
            F+   H+ +LL V+Y +MRYP DF+FD  DEDE EEE+ RS+LRK + +  R+ P+ +++FL + L + L AP    P PD EAALRL++H+ E      G   L K+G F  +++ LH SD++SHPH +VLMLYY+++VRY  +LR    L  L  ++  + GPRGL HP  ++R+R CY L KL   +G  +R Y +TA  GIQ+LL     +G  L  D  L L+ET GVL+G  G+EPA Q RYL  ++ P    ++ +L+  E    +                                          VA I+N+SKGF++P   ++ +  + +    + + A+P  E +R+K
Sbjct:  143 FLVADHLHRLLVVVYDQMRYPPDFAFDPEDEDEAEEEVYRSKLRKLHRDAVRSRPDESMEFLSSTLSSRLSAPLSSAPMPDVEAALRLVYHHCEGVRPPPGARTLAKDGRFRSMLIGLHDSDVSSHPHGEVLMLYYDVSVRYHPLLRDRPDL--LERLLGCISGPRGLTHPRPRVRSRSCYLLLKLVSSMGKSLRPYAETAAGGIQSLLN-DPTYGPLLSTDDRLYLFETTGVLLGKTGIEPADQRRYLTAVMTPHVHSIQAILSSTEMTTSSDLERCGEALAVA------------------------------VAAISNLSKGFSRPSGEVSSVLGETLPIVLSVLTALPHDETVRSK 469          
BLAST of mRNA_P-wetherbeei_contig11666.1.2 vs. uniprot
Match: A0A7S2EQS8_9STRA (Exportin-T (Fragment) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EQS8_9STRA)

HSP 1 Score: 209 bits (531), Expect = 2.160e-57
Identity = 121/370 (32.70%), Postives = 194/370 (52.43%), Query Frame = 1
Query:   10 SGRGFMALHHVPQLLAVLYRRMRYPLDFSFDASDEDEGEEEMLRSQLRKAYVNIGRACPEATLQFLCAALQALPAPPGQLPWPDAEAALRLIHHYSEACAGATGGARLLKEGAFPQVVLALHGSDIASHPHPQVLMLYYELTVRYSKILRSSTRLAALAPVMDALCGPRGLLHPNRQLRTRCCYFLTKLTRQLGTEMRDYVDTAVPGIQALLAAHADFGLGEDACLNLYETMGVLIGMQGVEPAKQLRYLEGILGPQFAEVRRLLAILEAAARTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAVIANVSKGFNK--PQDTLTPIFAQVMEATGAAVLAMPQHEALRAKTLFLIHR 1113
            S   F A +H+P+LL+ +Y +MRYP DF FD  ++++ EEE+ R++LRK Y  +    P+  L FL   L +L  P    P  D EA+LRL++H+ E      G   +L+   F  +++ALH SD++ H H +VLMLYY++  RYS +L+   +L  +  ++D++ G RGL HP+ ++R+R CY L KL + +G  MR YV+TAV GIQ+L++    F +  D  L L+ET+G+L+G  G+    Q RYL  ++ P    +  +L                                                   VA +A +SKGF +  P +    +F + ++   A + ++P+HEA+R K + L+ R
Sbjct:  338 SSLPFSAFNHLPRLLSTIYIQMRYPADFEFDFEEDEDAEEELYRAELRKFYRRVVSLYPDLCLSFLGNTLSSLSTPLSTTPTSDMEASLRLLYHHCEGIRPPPGTKTILRNETFRSLLVALHSSDVSHHSHREVLMLYYDVATRYSSLLKDHPQL--MPSLLDSMSGVRGLQHPHPKVRSRSCYLLLKLVKDMGQNMRPYVETAVGGIQSLISNPTAFPIQPDDTLYLFETIGLLLGKTGLSVPDQRRYLTAVMTPHVQSINNVLQ--------------------------------SPNLRRDPDEYGTILSSSVAALAYLSKGFTRQTPPEIQEVLF-ETVKICLAVLQSLPEHEAVRNKCMVLLQR 672          
BLAST of mRNA_P-wetherbeei_contig11666.1.2 vs. uniprot
Match: A0A448ZS68_9STRA (Exportin-T n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZS68_9STRA)

HSP 1 Score: 203 bits (516), Expect = 1.740e-54
Identity = 121/368 (32.88%), Postives = 184/368 (50.00%), Query Frame = 1
Query:   40 VPQLLAVLYRRMRYPLDFSFDASDEDEGEEEMLRSQLRKAYVNIGRACPEATLQFLCAALQALPAPPGQLPWPDAEAALRLIHHYSEACAGATGGARLLKEGAFPQVVLALHGSDIASHPHPQVLMLYYELTVRYSKILRSSTRLAALAPVMDALCGPRGLLHPNRQLRTRCCYFLTKLTRQLGTE----------MRDYVDTAVPGIQALLAAHADFGLGEDACLNLYETMGVLIGMQGVEPAKQLRYLEGILGPQFAEVRRLLAILEAAARTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAVIANVSKGFNKPQDTLTPIFAQVMEATGAAVLAMPQHEALRAKTLFLIHR 1113
            +P+LL + Y +MRYP DF +D  D+DE EEEM R++LRK      RA P+  LQF C  L  LP P    P P+ E A+ L++ Y E      G   +++   F  +++ LH SDI  HPH ++L+LYYE +VRY  +L+  + L  L  V+ A+ G RGL H + ++R+RCCY L +L + +GT           +R YV+TAV GIQ+LL  +    L  D  LNL+ET+G+L+G  G+ P++Q +YL  ++ P    +  +L                                                   VA IA +SKGF KP   +  +  + ++   + +  +P +E +R KT   + R
Sbjct:  429 LPKLLTITYNQMRYPPDFQYDFEDDDEAEEEMYRTELRKLNKKFVRANPDLCLQFTCQILSQLPLPLSTAPTPNVEVAISLVYQYCEGIRPPPGMKVVMRNETFCNLLVGLHTSDITEHPHREILILYYETSVRYYPLLKERSDL--LQKVLGAITGTRGLQHEDAKVRSRCCYLLLRLIKSMGTSGNKKSGGNCLLRPYVETAVSGIQSLLE-NKSIELRVDDTLNLFETIGLLLGKNGLSPSEQGQYLTQVMTPHVRSIETIL------------------------------NDKKHELAQDPDAYGETLSNSVAAIAYLSKGFKKPPIEVQNVLLETLKVAFSVLEMLPNNEEVRNKTYIFVQR 763          
BLAST of mRNA_P-wetherbeei_contig11666.1.2 vs. uniprot
Match: A0A7S2VAA3_9STRA (Exportin-T (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VAA3_9STRA)

HSP 1 Score: 197 bits (500), Expect = 1.270e-52
Identity = 122/374 (32.62%), Postives = 185/374 (49.47%), Query Frame = 1
Query:   10 SGRGFMALHHVPQLLAVLYRRMRYPLDFSFDASDEDEGEEEMLRSQLRKAYVNIGRACPEATLQFLC-AALQALPAPPG----QLPWPDAEAALRLIHHYSEACAGATGGARLLKEGAFPQVVLALHGSDIASHPHPQVLMLYYELTVRYSKILRSSTRLAALAPVMDALCGPRGLLHPNRQLRTRCCYFLTKLTRQLGTEMRDYVDTAVPGIQALLAAHADFGLGEDACLNLYETMGVLIGMQGVEPAKQLRYLEGILGPQFAEVRRLLAILEAAARTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAVIANVSKGFNK-PQDTLTPIFAQVMEATGAAVLAMPQHEALRAKTLFLIHR 1113
            +G  +    H+PQ+L + YR+++YP DF +D  D+   EEE+ R++L K YV +  A PE  LQF+C AA Q L A        LP PD EA L L+ HY E    A G   +LK   F  ++ A+H SDIASHPH QVL LYY+  VRY    +       L+ ++D++ G RGL H    +R+RC Y   +L + L   +R  V+TAV GI +LL  +++  L  D  L L+ET+G+L+G  G+ P +Q RYL  ++ P    ++ +L+    ++                                            +A IA +SKGF K P + +  +  +        + A+P  +A+R K +  + R
Sbjct:  372 AGTNYGLRQHIPQILNIFYRQLKYPEDFDYDFEDDINAEEELYRTELTKLYVKLVTAAPEVCLQFVCEAAGQLLQASSNITLSSLPTPDVEATLSLVFHYCEGVRPAPGVKVMLKNKTFVNLLSAIHNSDIASHPHEQVLCLYYDTAVRYCLFYKDDAHGELLSKLLDSISGSRGLQHAQPMVRSRCSYLFLRLVKSLVALLRPLVETAVHGISSLLT-NSELELRPDDTLYLFETIGLLLGKTGLTPLEQQRYLTLVMTPHVQSIKNVLSTPGLSSDV--------------------------------EAYGESLSYSIAAIAYLSKGFAKQPSNEIQQVLIEATNIALEVLRALPVSDAVRNKVMVFLQR 712          
BLAST of mRNA_P-wetherbeei_contig11666.1.2 vs. uniprot
Match: A0A6U9ZEP0_9STRA (Exportin-T n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A6U9ZEP0_9STRA)

HSP 1 Score: 196 bits (499), Expect = 1.780e-52
Identity = 124/370 (33.51%), Postives = 182/370 (49.19%), Query Frame = 1
Query:   40 VPQLLAVLYRRMRYPLDFSFDASDEDEGEEEMLRSQLRKAYVNIGRACPEATLQFLCAALQALPAPPGQLPWPDAEAALRLIHHYSEACAGATGGARLLKEGAFPQVVLALHGSDIASHPHPQVLMLYYELTVRYSKILRSSTRLAALAPVMDALCGPRGLLHPNRQLRTRCCYFLTKLTRQLGTE------------MRDYVDTAVPGIQALLAAHADFGLGEDACLNLYETMGVLIGMQGVEPAKQLRYLEGILGPQFAEVRRLLAILEAAARTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAVIANVSKGFNKPQDTLTPIFAQVMEATGAAVLAMPQHEALRAKTLFLIHR 1113
            +P+LL + Y +MRYP DF +D  D+DE EEEM R++LRK      RA PE  LQ  C  L  LP P    P P  EAAL L++ Y E      G   +++   F  +++ LH SDI  HPH +VL LYYE +VRY  +L+    L  L  ++ A+ G RGL H N ++R+RCCY L +L + +G              +R YV+TAV GIQ LL  + +  L  +  LNL+ET+G+L+G  G+ P++Q +YL  ++ P    VR +  IL    +                                           +A IA +SKGF KP   +  +  + +    + +  +P +E +R KT   + R
Sbjct:  255 LPKLLTITYNQMRYPPDFQYDFEDDDEAEEEMYRTELRKLNKKFVRANPELCLQLTCQILSQLPLPLSTAPTPHVEAALSLVYQYCEGIRPPPGMKVVMRNETFCNLLVGLHTSDIIEHPHREVLTLYYETSVRYYPLLQKRPDL--LQKLLGAMTGTRGLQHENAKVRSRCCYSLLRLIKSVGNTNNANKSNESSCLLRPYVETAVSGIQGLLE-NENIELRVEDTLNLFETIGLLLGKNGLSPSEQGQYLAQVMTPH---VRSIETILNGKKQE---------------------------LAQDPDAYGETLSNSIAAIAYLSKGFKKPPFEVQSVLLETLRVAFSVLETLPTNEEVRNKTYVFVQR 591          
BLAST of mRNA_P-wetherbeei_contig11666.1.2 vs. uniprot
Match: A0A1E7FPN3_9STRA (Exportin-T n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FPN3_9STRA)

HSP 1 Score: 194 bits (494), Expect = 1.610e-51
Identity = 119/365 (32.60%), Postives = 181/365 (49.59%), Query Frame = 1
Query:   46 QLLAVLYRRMRYPLDFSFDASDEDEGEEEMLRSQLRKAYVNIGRACPEATLQFLCAALQALPAPPGQLPWPDAEAALRLIHHYSEACAGATGGARLLKEGAFPQVVLALHGSDIASHPHPQVLMLYYELTVRYSKILRSSTRLAALAPVMDALCGPRGLLHPNRQLRTRCCYFLTKLTRQLGTE---------MRDYVDTAVPGIQALLAAHADFGLGEDACLNLYETMGVLIGMQGVEPAKQLRYLEGILGPQFAEVRRLLAILEAAARTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAVIANVSKGFNKPQDTLTPIFAQVMEATGAAVLAMPQHEALRAKTLFLIHR 1113
            +LL + Y +MRYP DF +D  DEDE EEE+ R++LRK      R   E  L+ L   L  LP P    P PD E A+ L++ Y E      G   ++++  F  +++ LH SDI  HPH +VL LYYE +VRY  +L+  + L  L  V+ A+ GPRGL H N ++R+RCCY L +L + +G+          +R YV+ AV GIQ LL  + +  L  +  LNL+ET+G+L+G  G+ P++Q +YL  ++ P    ++ +L                                                   +A IA +SKGF KP   +  +  + +E   + + A+P +E +R KT   + R
Sbjct:  434 KLLNITYNQMRYPPDFQYDYEDEDEAEEELYRTELRKLNQKFVRKNSELCLRTLSTILSQLPLPLSAAPTPDIEVAVSLVYQYCEGIRPPPGMQVVMRDETFRNLLVGLHLSDIIQHPHSEVLTLYYETSVRYHPLLKERSDL--LQKVLGAMTGPRGLQHENGRVRSRCCYLLLRLIKYVGSSSNKSNESSVLRPYVENAVSGIQGLLENN-NVQLRLEDTLNLFETIGLLLGKNGLSPSEQGQYLTNVMTPHVHSIKTIL------------------------------NERKQYISQDPDTYEQTLSNSIAAIAYLSKGFKKPSTEVQTVLLETLEVAFSVLEALPNNEEIRNKTYVFVQR 765          
BLAST of mRNA_P-wetherbeei_contig11666.1.2 vs. uniprot
Match: B8C3C8_THAPS (Exportin-T n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C3C8_THAPS)

HSP 1 Score: 185 bits (470), Expect = 2.910e-48
Identity = 115/359 (32.03%), Postives = 178/359 (49.58%), Query Frame = 1
Query:   46 QLLAVLYRRMRYPLDFSFDASDEDEGEEEMLRSQLRKAYVNIGRACPEATLQFLCAALQALPAPPGQLPWPDAEAALRLIHHYSEACAGATGGARLLKEGAFPQVVLALHGSDIASHPHPQVLMLYYELTVRYSKILRSSTRLAALAPVMDALCGPRGLLHPNRQLRTRCCYFLTKLTRQLGTE-MRDYVDTAVPGIQALLAAHADF-GLGEDACLNLYETMGVLIGMQGVEPAKQLRYLEGILGPQFAEVRRLLAILEAAARTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAVIANVSKGF-NKPQDTLTPIFAQVMEATGAAVLAMPQHEALRAKTLFLIHR 1113
            ++L++L  RM+YP  F F        EEE+ R+ LRK Y  I R  P+  L F+ A+L +LP P   +   D E ALRL+HHY E    A G    L++  F ++V ALH SD++SHPH +VL+LYY+L+VRY+ +L+ S     L+ ++ AL G RGL HP+ ++R+RCCY L +L + +G + MR YV+  V GIQ LL    +   L  +  L L+E  G L+G  G++   Q R    +L P    + + L   + A                                             ++ IA +SKG+ N P   +  +    ++   + ++A+P    +R +T  L+ R
Sbjct:  602 RVLSILQERMKYPSSFDFXXXXXXXAEEEVYRTHLRKLYQRIVRFKPQMVLHFMAASLSSLPQPLSMVSTSDMEVALRLVHHYGEGRRPAPGAKTALRDAQFREMVTALHRSDVSSHPHREVLLLYYDLSVRYASLLKDSPP-ELLSGLLGALSGDRGLQHPHARVRSRCCYLLLRLVKSVGAKAMRPYVEVVVDGIQRLLFPSTNILQLPANEALYLFEITGTLLGTTGLDNEVQQRCATAVLTPHVQSIEKTLQSPDLARDV--------------------------------EQYGEQLSMSISAIAQLSKGWQNHPPPEVQAVLVAAVDVCRSVLVALPSSPLVRNRTAVLLQR 927          
BLAST of mRNA_P-wetherbeei_contig11666.1.2 vs. uniprot
Match: A0A1Z5J6Z5_FISSO (Exportin-T n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J6Z5_FISSO)

HSP 1 Score: 181 bits (458), Expect = 1.040e-46
Identity = 119/367 (32.43%), Postives = 183/367 (49.86%), Query Frame = 1
Query:   37 HVPQLLAVLYRRMRYPLDFSFDASDEDEGEEEMLRSQLRKAYVNIGRACPEATLQFLCAALQALPAPPGQLPWPDAEAALRLIHHYSEACAGATGGARLLKEGAFPQVVLALHGSDIASHPHPQVLMLYYELTVRYSKILRSSTRLAALAP------VMDALCGPRGLLHPNRQLRTRCCYFLTKLTRQLGTEMRDYVDTAVPGIQALLAAHADF--GLGEDACLNLYETMGVLIGMQGVEPAKQLRYLEGILGPQFAEVRRLLAILEAAARTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAVIANVSKGFNKPQDTLTPIFAQVMEATGAAVLAMPQHEALRAKTLFLIHR 1113
            H+PQLL VLY +++YP DFS+D  DE   EE   R+ L K +  + R      LQF+ A  Q +     + P  + E  LRL++H+ E    + G   ++K   F  ++ ALH SDIA HPH +VL LYY+  VRY  I  +++  A +A       V++A+ G RGLLH + ++R+RCCY L  L +Q    +R +V+TAV GI+ LL+ + D+   L  D  L L+ETMG+L+G   +E  KQ  YL  ++ P    VR+ +A   +   T                                          +A +A++SKGF+KP D +  + +  +    + +   P  E +R KT+  + R
Sbjct:  435 HLPQLLNVLYSQLKYPADFSYDYEDELVAEEMAYRADLAKLFGKMVRIDSNIWLQFVVATAQRMEGI-SKAPTQEVEVFLRLLYHFCEGIRPSPGLKVVMKNQVFCSLLTALHHSDIADHPHREVLCLYYDTAVRYHPIFITNSGNAKVANTPLLSRVLEAMSGTRGLLHSHVRVRSRCCYLLLNLVKQTAPVLRPFVETAVFGIRGLLS-NGDYCSTLRPDDSLYLFETMGILLGKTALEAEKQRGYLVEVVTPHIERVRQEIAFAVSTVDTDHETADLREEMLASA---------------------------IAAVAHLSKGFSKPSDGVLAVLSDSVHVVLSFLQIAPTSELVRNKTMVFLQR 772          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11666.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNT8_ECTSI1.190e-8945.69Exportin-T n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A836CAL0_9STRA7.230e-8845.26Exportin-T n=1 Tax=Tribonema minus TaxID=303371 Re... [more]
A0A7S4M7Y7_9STRA5.750e-6536.39Exportin-T (Fragment) n=1 Tax=Odontella aurita Tax... [more]
A0A7S2EQS8_9STRA2.160e-5732.70Exportin-T (Fragment) n=2 Tax=Ditylum brightwellii... [more]
A0A448ZS68_9STRA1.740e-5432.88Exportin-T n=1 Tax=Pseudo-nitzschia multistriata T... [more]
A0A7S2VAA3_9STRA1.270e-5232.62Exportin-T (Fragment) n=1 Tax=Amphiprora paludosa ... [more]
A0A6U9ZEP0_9STRA1.780e-5233.51Exportin-T n=1 Tax=Pseudo-nitzschia australis TaxI... [more]
A0A1E7FPN3_9STRA1.610e-5132.60Exportin-T n=1 Tax=Fragilariopsis cylindrus CCMP11... [more]
B8C3C8_THAPS2.910e-4832.03Exportin-T n=1 Tax=Thalassiosira pseudonana TaxID=... [more]
A0A1Z5J6Z5_FISSO1.040e-4632.43Exportin-T n=1 Tax=Fistulifera solaris TaxID=15195... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11666contigP-wetherbeei_contig11666:2..1988 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FNT8
PFAMsXpo1
Model size1113
Max annot lvl2759|Eukaryota
KEGG koko:K14288
KEGG Pathwayko03013,map03013
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000049,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0005049,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005643,GO:0005737,GO:0005829,GO:0006403,GO:0006405,GO:0006409,GO:0006611,GO:0006810,GO:0006886,GO:0006913,GO:0007275,GO:0008104,GO:0008150,GO:0008536,GO:0009653,GO:0009791,GO:0009888,GO:0009908,GO:0009933,GO:0010014,GO:0012505,GO:0015031,GO:0015833,GO:0015931,GO:0016363,GO:0017016,GO:0019899,GO:0022414,GO:0031267,GO:0031503,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0033036,GO:0034399,GO:0034613,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046907,GO:0048367,GO:0048507,GO:0048532,GO:0048608,GO:0048731,GO:0048856,GO:0050657,GO:0050658,GO:0051020,GO:0051031,GO:0051168,GO:0051169,GO:0051179,GO:0051234,GO:0051236,GO:0051641,GO:0051649,GO:0061458,GO:0070013,GO:0070727,GO:0071166,GO:0071426,GO:0071431,GO:0071528,GO:0071702,GO:0071705,GO:0090567,GO:0097064,GO:0097159,GO:0140104,GO:0140142,GO:1901363
Exons5
Evalue1.38e-87
EggNOG OGsKOG2021@1|root,KOG2021@2759|Eukaryota
DescriptiontRNA re-export from nucleus
Cds size1089
COG categoryK
BRITEko00000,ko00001,ko03016
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11666.1.2prot_P-wetherbeei_contig11666.1.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig11666 2..1964 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185921.471676-CDS-P-wetherbeei_contig11666:1..851683185921.471676-CDS-P-wetherbeei_contig11666:1..85Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11666 2..85 -
1683185921.4854746-CDS-P-wetherbeei_contig11666:309..6811683185921.4854746-CDS-P-wetherbeei_contig11666:309..681Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11666 310..681 -
1683185921.4968393-CDS-P-wetherbeei_contig11666:825..10741683185921.4968393-CDS-P-wetherbeei_contig11666:825..1074Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11666 826..1074 -
1683185921.5039015-CDS-P-wetherbeei_contig11666:1338..16511683185921.5039015-CDS-P-wetherbeei_contig11666:1338..1651Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11666 1339..1651 -
1683185921.5111008-CDS-P-wetherbeei_contig11666:1893..19641683185921.5111008-CDS-P-wetherbeei_contig11666:1893..1964Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11666 1894..1964 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185921.518284-UTR-P-wetherbeei_contig11666:1964..19881683185921.518284-UTR-P-wetherbeei_contig11666:1964..1988Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig11666 1965..1988 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig11666.1.2

>prot_P-wetherbeei_contig11666.1.2 ID=prot_P-wetherbeei_contig11666.1.2|Name=mRNA_P-wetherbeei_contig11666.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=363bp
MALHHVPQLLAVLYRRMRYPLDFSFDASDEDEGEEEMLRSQLRKAYVNIG
RACPEATLQFLCAALQALPAPPGQLPWPDAEAALRLIHHYSEACAGATGG
ARLLKEGAFPQVVLALHGSDIASHPHPQVLMLYYELTVRYSKILRSSTRL
AALAPVMDALCGPRGLLHPNRQLRTRCCYFLTKLTRQLGTEMRDYVDTAV
PGIQALLAAHADFGLGEDACLNLYETMGVLIGMQGVEPAKQLRYLEGILG
PQFAEVRRLLAILEAAARTGTGNGAGSGVGNGVGNGGGASSSAGDGGGGN
AEAAGTALALSVAVIANVSKGFNKPQDTLTPIFAQVMEATGAAVLAMPQH
EALRAKTLFLIHR
back to top

mRNA from alignment at P-wetherbeei_contig11666:2..1988-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig11666.1.2 ID=mRNA_P-wetherbeei_contig11666.1.2|Name=mRNA_P-wetherbeei_contig11666.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1987bp|location=Sequence derived from alignment at P-wetherbeei_contig11666:2..1988- (Phaeothamnion wetherbeei SAG_119_79)
GGCGTCGGCAGCGGGAGAGGCTTTATGGCGCTGCACCACGTGCCGCAGCT ACTGGCGGTGCTCTACCGAAGGATGCGATACCCGCTCGACTTCAGGTAGG CTTTGGTTGCTGTGTGTCTGGCTGTGTTGTTTGGATGGTTTCTTGCTACC ACCTCAAATCGATGAGTGCCTTCATTCTGTTTCCATGCTTATTCTCGGCT GAATCACGCCTGGATACCGGAGTGCGCTCGTTCTCTCCTTTCCGCCCCAT GCCTGGCCCCTGCTACACCTTATTACCCCACCACTTCTTTCGTCGCCGCT CTCTTTTGGTTCCGACCTGCGAACCGAACATATCCAGCTTCGACGCGAGC GACGAGGACGAGGGCGAGGAGGAGATGCTGCGATCGCAGCTGCGGAAGGC GTACGTAAACATCGGCCGCGCCTGCCCCGAGGCGACCCTCCAGTTCCTCT GCGCGGCACTGCAGGCGCTTCCGGCGCCGCCGGGGCAGCTGCCGTGGCCC GACGCGGAGGCCGCGCTGCGGCTAATTCACCATTACTCGGAGGCGTGCGC CGGGGCGACCGGGGGGGCGCGGCTGCTGAAGGAGGGGGCGTTCCCGCAGG TGGTGCTGGCGCTGCACGGCAGTGACATCGCTAGCCACCCGCACCCGCAG GTGCGCTGCTTTCTGACGCTGGTGCTGCCTCTTTTCACCTTCCTTCTTCG TTTTACCCCGCTGCGTTGTCGGCATGTGTCTCGTCACGTCATCGGAGCAT TAACCGCAGGCCATGGTCCGTTGCACCATCTGCAGAGTTTTCCTTCCGAC ATCAACGCCGGCCAAGCCTTTTATTCGACTTTGGAACCGCACAATGCGCG AAGCCGTTTTGTGTCAGCGAGCCACAAGTGACTTCTCTACTTTGTTCTTT TTTGCCTGCTGCAGGTGCTGATGTTGTACTACGAGCTGACGGTGCGCTAC TCCAAGATTCTCCGCTCCTCCACGCGCCTCGCCGCCCTGGCGCCCGTCAT GGACGCGCTCTGCGGGCCGCGCGGCCTGCTGCACCCCAACCGCCAGCTCC GGACCCGCTGCTGCTACTTCCTGACTAAGCTGACGCGTCAGCTGGGAACC GAAATGCGAGACTACGTGGACACGGCGGTCCCGGGCATCCAGGCGCTGCT GGCCGCCCACGCCGTCGGCTTTGCGGGCGGACCGCCGACGCCGGAGGCGG CCCGCAGCGGCTGCGGTGTTTACCTGAACGGCGGAAGCAACAGCAGCAGC GTGGGCGGGAGCAGCGGGTTTGGCGCCGAAGCAGGCGGCAGCGGTACCGG CGGCGAGGATTTTGGGCTAGGGGAGGATGCATGCCTGAACTTGTACGAAA CGATGGGCGTCCTGATCGGCATGCAGGGCGTCGAGCCCGCGAAGCAGCTG CGGTACCTCGAAGGGATCCTCGGGCCGCAGTTCGCCGAGGTTCGCCGGCT GCTGGCAATCTTGGAGGCGGCGGCAAGAACAGGCACTGGCAATGGCGCCG GCAGCGGCGTCGGGAACGGTGTCGGAAATGGCGGCGGCGCTTCCAGTTCT GCCGGCGACGGCGGCGGCGGGAATGCAGAAGCGGCGGGTACGGCGCTGGC GCTCAGCGTGGCGGTGATTGCCAACGTTAGCAAAGGCTTCAACAAGCCGC AAGACACGCTTACGCCCATCTTCGCCCAGGTGCGACTGATTGCCGCCTTG AATCGTCGCTACCTCTCGCTTCCCTCCATTTGTGTGAGTGTCCGCTGCCG TTGCGCTTAGAGGTCTGCGCCTTGTACATATGCTAGTTTAGCTGCCATGC CAGCTGGGCACTTACCGCCTTTCTCGTTCTCCGACCGCGTCCTCCCCATT CGTCTTTGCTACCATTGCGGCCGTGTGCAATCGCGCCGAAAACAAACGAA CAGGTGATGGAGGCGACGGGGGCGGCGGTGCTGGCGATGCCACAGCACGA AGCGCTGCGGGCCAAGACGCTCTTCCTGATCCACCGT
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig11666:2..1988-

>mRNA_P-wetherbeei_contig11666.1.2 ID=mRNA_P-wetherbeei_contig11666.1.2|Name=mRNA_P-wetherbeei_contig11666.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1089bp|location=Sequence derived from alignment at P-wetherbeei_contig11666:2..1988- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGCTGCACCACGTGCCGCAGCTACTGGCGGTGCTCTACCGAAGGAT
GCGATACCCGCTCGACTTCAGCTTCGACGCGAGCGACGAGGACGAGGGCG
AGGAGGAGATGCTGCGATCGCAGCTGCGGAAGGCGTACGTAAACATCGGC
CGCGCCTGCCCCGAGGCGACCCTCCAGTTCCTCTGCGCGGCACTGCAGGC
GCTTCCGGCGCCGCCGGGGCAGCTGCCGTGGCCCGACGCGGAGGCCGCGC
TGCGGCTAATTCACCATTACTCGGAGGCGTGCGCCGGGGCGACCGGGGGG
GCGCGGCTGCTGAAGGAGGGGGCGTTCCCGCAGGTGGTGCTGGCGCTGCA
CGGCAGTGACATCGCTAGCCACCCGCACCCGCAGGTGCTGATGTTGTACT
ACGAGCTGACGGTGCGCTACTCCAAGATTCTCCGCTCCTCCACGCGCCTC
GCCGCCCTGGCGCCCGTCATGGACGCGCTCTGCGGGCCGCGCGGCCTGCT
GCACCCCAACCGCCAGCTCCGGACCCGCTGCTGCTACTTCCTGACTAAGC
TGACGCGTCAGCTGGGAACCGAAATGCGAGACTACGTGGACACGGCGGTC
CCGGGCATCCAGGCGCTGCTGGCCGCCCACGCCGATTTTGGGCTAGGGGA
GGATGCATGCCTGAACTTGTACGAAACGATGGGCGTCCTGATCGGCATGC
AGGGCGTCGAGCCCGCGAAGCAGCTGCGGTACCTCGAAGGGATCCTCGGG
CCGCAGTTCGCCGAGGTTCGCCGGCTGCTGGCAATCTTGGAGGCGGCGGC
AAGAACAGGCACTGGCAATGGCGCCGGCAGCGGCGTCGGGAACGGTGTCG
GAAATGGCGGCGGCGCTTCCAGTTCTGCCGGCGACGGCGGCGGCGGGAAT
GCAGAAGCGGCGGGTACGGCGCTGGCGCTCAGCGTGGCGGTGATTGCCAA
CGTTAGCAAAGGCTTCAACAAGCCGCAAGACACGCTTACGCCCATCTTCG
CCCAGGTGATGGAGGCGACGGGGGCGGCGGTGCTGGCGATGCCACAGCAC
GAAGCGCTGCGGGCCAAGACGCTCTTCCTGATCCACCGT
back to top