mRNA_P-wetherbeei_contig11620.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig11620.1.1 vs. uniprot
Match: A0A835ZMI0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZMI0_9STRA) HSP 1 Score: 197 bits (501), Expect = 1.630e-57 Identity = 121/255 (47.45%), Postives = 157/255 (61.57%), Query Frame = 1 Query: 1 VTLGGAVYLEKLPDRVKILGENVPKPFSGGERRVVDCATDESVGLAVALRRAVLVPRGLWEAASTRASFVMNGGRMRLGVDIRGAKVSQADVMALGASGRVAGAAALPPP--------DRISKRQFLSMSAADKRAVLRAAGVRPPRXXXXXXXXXXXXXXGATEALDDLLLPLMDETVRRDVLIHRAVERENYAAAASLSEGKSERHVVAERLAEAVATEDFPLAARLRERLDWLQQLRADMTQDEGSYQKDLD 741 ++L GA+ +E+LP V +LGE P+PFSGGE VV+CA DE+VG+A+A RA+ + R L+EAAS A+F+M GRMRL +D+RG + A+PP D S ++ + +A KRAVLR AGVRPPR + LD+LLLPL+DETVRRDV++ RA+ RE+YAAAA L SER VV LA+AV ED+ A RLR RL+ L LRAD+TQDEGSY + LD Sbjct: 172 LSLAGALAVERLPQMVTLLGETFPRPFSGGELAVVECAADEAVGVALAQGRALCIERSLFEAASLPANFIMEDGRMRLNIDLRGQR-------------------AMPPXXXXXXXXADIKSAARYFKLDSAAKRAVLRGAGVRPPRRRM-----------ASAARLDELLLPLLDETVRRDVMLRRALAREDYAAAAQLGGAGSERAVVKHALADAVEEEDYEAANRLRARLEVLTALRADVTQDEGSYDRYLD 396
BLAST of mRNA_P-wetherbeei_contig11620.1.1 vs. uniprot
Match: D7G1S6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1S6_ECTSI) HSP 1 Score: 150 bits (379), Expect = 2.020e-39 Identity = 104/248 (41.94%), Postives = 134/248 (54.03%), Query Frame = 1 Query: 1 VTLGGAVYLEKLPDRVKILGENVPKPFSGGERRVVDCATDESVGLAVALRRAVLVPRGLWEAASTRASFVMNGGRMRLGVDIRGAKVSQADVMALGASGRVAGAAALPPPDRISKRQFLS-MSAADKRAVLRAAGVRPPRXXXXXXXXXXXXXXGATEALDDLLLPLMDETVRRDVLIHRAVERENYAAAASLSEGKSERHVVAERLAEAVATEDFPLAARLRERLDWLQQLRADMTQDEGSYQKDLD 741 +TLG + YL + PD GG+R +++ TDE+VG+A+AL R V V +WE R FVM+G +MRL +D V D L ++ PP I R LS MS +KR LRA GVRPPR L+DL+LP MDE VRRDVL+ RA ++A A L GKSERH+VAE+L A+ D LA+ L +RL+ L+ R D TQDEGSYQ+DLD Sbjct: 184 ITLGASAYLRRRPDA----------EGRGGQRSIIEVTTDEAVGVALALGRQVYVDEEIWEGGRVRVKFVMDGDKMRLDLD----NVEGRD---LSSTSDKEAPPVQPPAWTIKSRGALSRMSVEEKRECLRATGVRPPRKRALSESEDPDRD------LEDLMLPRMDEAVRRDVLMARAWREGDFATAGELCAGKSERHIVAEQLQAALKDNDQDLASILMQRLEILESCRMDPTQDEGSYQRDLD 408
BLAST of mRNA_P-wetherbeei_contig11620.1.1 vs. uniprot
Match: A0A0G4GJY9_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GJY9_VITBC) HSP 1 Score: 114 bits (284), Expect = 1.790e-25 Identity = 84/254 (33.07%), Postives = 135/254 (53.15%), Query Frame = 1 Query: 1 VTLGGAVYLEKLPDRVKILGENVPKPFSGGERRVVDCATDESVGLAVALRRAVLVPRGLWEAASTRASFVMNGGRMRLGVD--IRGAKVSQADVMALGASGRVAGAAALPPPDRISKRQFLSMSAADKRAVLRAAG--VRPPRXXXXXXXXXXXXXXGATEA---LDDLLLPLMDETVRRDVLIHRAVERENYAAAASLSEGKSERHVVAERLAEAVATEDFPLAARLRERLDWLQQLRADMTQDEGSYQKDLD 741 +++ G V L +L + + ++GE VPKP +GG+ V + DE++G+A LR+ + V R LW+ + +A F + G +++ +D + ++ D+ G R+ A + S +F M DKR + A+ R PR G+ E+ ++D+LL LMDE VRR V+I RA ER ++ AA L KS+R + E + EA D+ AA L+ERL+ L + D+T +EGSY + LD Sbjct: 219 LSVAGYVRLTQLSEMMVLMGELVPKPATGGKEVVAQASRDEAIGIATVLRQPIHVQRSLWDKLALKAQFKLLDGALKISIDPALAAGSLAPEDLDEEGIIDRLGKKAV----EVRSVDEFEGMDDGDKRRCILASNPLARLPRR-------------GSEESQSKVEDMLLNLMDEAVRRQVMIKRASERGDFQLAARLVADKSDRQQIKELMQEAADAGDYKTAAELKERLEVLTMAKWDVTAEEGSYSRFLD 455
BLAST of mRNA_P-wetherbeei_contig11620.1.1 vs. uniprot
Match: A0A7S0L3C8_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L3C8_9EUKA) HSP 1 Score: 94.7 bits (234), Expect = 1.260e-18 Identity = 84/256 (32.81%), Postives = 129/256 (50.39%), Query Frame = 1 Query: 1 VTLGGAVYLEK-LPDRVKILGENVPKPF-------SGGERRVVDCATDESVGLAVALRRAVLVPRGLWEAASTRASFVMNGGRMRLGVDIRGAKVSQADVMALGASGRVAGAAALPPPDRISKRQFLSMSAADKRA-VLRAAGVRPPRXXXXXXXXXXXXXXGATEALDDLLLPLMDETVRRDVLIHRAVERENYAAAASLSEGKSERHVVAERLAEAVATEDFPLAARLRERLDWLQQLRADMTQDEGSYQKDLD 741 + LGGAV +E+ LP ++ ++P S E R+ +C DE++G+A+AL V V +W AA T S+ + G++RL D+ A + ++ + A + P P + L + + A V AAG+R PR + E L ++ PL+DE VRRDV I+RAV+ +++ AA+L G S R V +L +AV+ E + AA L L RAD+TQDEG+Y + LD Sbjct: 196 LVLGGAVIVERCLPPSDGVMPTDLPVAADTRWPEGSTTEPRLCECTVDEALGIALALGGEVYVEETVWLAAMTAPSYSLQRGKLRL--DVGSATLPASETVRTRAKRTPS-----PLPWEVRSATELDVMTTEMLARVALAAGMRLPRARRL-----------SHERLLTMIEPLLDEAVRRDVRINRAVKADDFEEAATLHAGASRRSAVLGQLRQAVSEERYGAAAELAVDLAIETSRRADITQDEGAYSRFLD 433
BLAST of mRNA_P-wetherbeei_contig11620.1.1 vs. uniprot
Match: A0A7S0BU30_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BU30_9RHOD) HSP 1 Score: 92.4 bits (228), Expect = 4.070e-18 Identity = 72/223 (32.29%), Postives = 110/223 (49.33%), Query Frame = 1 Query: 73 KPFSGGERRVVDCATDESVGLAVALRRAVLVPRGLWEAASTRASFVMNGGRMRLGVDIRGAKVSQADVMALGASGRVAGAAALPPPDRISKRQFLSMSAADKRAVLRAAGVRPPRXXXXXXXXXXXXXXGATEALDDLLLPLMDETVRRDVLIHRAVERENYAAAASLSEGKSERHVVAERLAEAVATEDFPLAARLRERLDWLQQLRADMTQDEGSYQKDLD 741 K + E ++C E + L+ L + + R W STR + + + DI + S+ D A + P + ++ + L MSA R LR+AG+ P + L L+P++DE+VRR +LI AV+RE+Y A+ L G+SER V ++L EAVA E + A +L+ER D L ++RAD TQ+EGSY + LD Sbjct: 175 KTYYSQEPEEIECRPGEVISLSQELNIPISMERWAWTLYSTRLAGDRDSNSLGFSEDIEFVESSKRD------------ADTVKPVELLTNDEILGMSAPQLRTALRSAGI-PSKTR------------STRGELLTRLIPMIDESVRRAMLIDEAVQREDYGRASELQAGQSERSRVKQQLEEAVAEERYLDAQKLQERFDRLTEMRADPTQEEGSYDRYLD 372
BLAST of mRNA_P-wetherbeei_contig11620.1.1 vs. uniprot
Match: A0A7S1U145_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U145_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 2.200e-17 Identity = 74/219 (33.79%), Postives = 110/219 (50.23%), Query Frame = 1 Query: 88 GERRVVDCATDESVGLAVALRRAVLVPRGLWEAASTRASFVMNGGRMRLGVDIRGAKVSQADVMALGASGRVAGAAALPPPDRISKRQ-FLSMSAADKRAVLRAAGVRPPRXXXXXXXXXXXXXXGATEALDDLLLPLMDETVRRDVLIHRAVERENYAAAASLSEGKSERHVVAERLAEAVATEDFPLAARLRERLDWLQQLRADMTQDEGSYQKDLD 741 G R+V+C DE++ LA L + L++ A + G+ + + + AK+ +A A G A+L P + + ++ A+KRA+L +G PR ALD LLPL+DE VRRDV + +A+ + + LS+ +SER V +L AVA ED+ LAA L+ +LD L + RAD+TQDEGSY LD Sbjct: 178 GSTRLVECYADEAIALAQGLGLQLTCETELFDGACVPVASATFDGK-GVAITVNEAKLPEASE-ADGKPNLPPHKASLHPAWEVKHADDYFKLTLAEKRALLARSGADVPRRGR------------GEAALDSALLPLLDENVRRDVQLMKALRAGDMERVSELSQNRSERGSVKMQLESAVADEDYALAAELQAKLDVLDRCRADITQDEGSYDPYLD 382
BLAST of mRNA_P-wetherbeei_contig11620.1.1 vs. uniprot
Match: A0A8J2SZT1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SZT1_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 3.430e-17 Identity = 84/239 (35.15%), Postives = 116/239 (48.54%), Query Frame = 1 Query: 34 LPDRVKILGENVPKPFSGGERRVVDCATDESVGLAVALRRAVLVPRGLWEAASTRASFVMNGGRMRLGVDIRGAKVSQADVMALGASGRVAGAAALPPPDRI-SKRQFLSMSAADKRAVLRAAGVRPPRXXXXXXXXXXXXXXGATEALDDLLLPLMDETVRRDVLIHRAVERENYAAAASLSEGKSERHVVAERLAEAVATEDFPLAARLRERLDWL--QQLRADMTQDEGSYQKDLD 741 L DR + G +P +G +V+C DE+VGLA+A VL R L E S A F G R V ++ D + R+A A P+ I S ++ ++ K VL A R G +D+LL+PL+DE VRRD+ + A++R + A AA+L GKS+RH +R A+A A D LA LR R D +RAD+TQDEGSY + LD Sbjct: 218 LDDRTDLAGALRLQPRNGSAPLIVECFADEAVGLALAANVDVLTERSLLEVFSRTARF---GLERRTSVAPLKMRLQVVDNL----EPRIAEAVEADAPETIKSADEYDALGTQGKLRVLVEAE-EFKRRKLRLPRPRVINAAGNDAPVDELLIPLLDEAVRRDLAVEAALKRGDIAGAAALMAGKSKRHAARDRAAQASA--DGDLAGELRARDDEAVYSAIRADITQDEGSYSRFLD 446
BLAST of mRNA_P-wetherbeei_contig11620.1.1 vs. uniprot
Match: A0A7S2ZQZ0_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZQZ0_9RHOD) HSP 1 Score: 89.0 bits (219), Expect = 7.650e-17 Identity = 71/223 (31.84%), Postives = 111/223 (49.78%), Query Frame = 1 Query: 73 KPFSGGERRVVDCATDESVGLAVALRRAVLVPRGLWEAASTRASFVMNGGRMRLGVDIRGAKVSQADVMALGASGRVAGAAALPPPDRISKRQFLSMSAADKRAVLRAAGVRPPRXXXXXXXXXXXXXXGATEALDDLLLPLMDETVRRDVLIHRAVERENYAAAASLSEGKSERHVVAERLAEAVATEDFPLAARLRERLDWLQQLRADMTQDEGSYQKDLD 741 K + E +++C E + L+ L + + W STR + + M DI + S++D +G+ P + ++K + MS + R LR+AG+ P + L + L+P++DE+ RR +LI AV RE+Y A+ L G+SER V ++L EAVA E + A +L+ER D L ++RAD TQDEGSY + LD Sbjct: 185 KTYYSQEPEIIECRPGEVISLSQELDIPISMDSWAWTLYSTRLARDRDSNSMGFSEDIEFVERSKSDAD----TGK--------PVELMTKDEIRRMSVPELRTALRSAGI-PSKTR------------STRGELLNRLIPMIDESERRSMLIDEAVRREDYGRASELQAGQSERSRVKQQLEEAVAEERYLDAQKLQERFDRLTEMRADPTQDEGSYDRYLD 382
BLAST of mRNA_P-wetherbeei_contig11620.1.1 vs. uniprot
Match: A0A7R9U4Z2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U4Z2_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 9.210e-17 Identity = 76/236 (32.20%), Postives = 116/236 (49.15%), Query Frame = 1 Query: 37 PDRVKILGENVPKPFSGGERRVVDCATDESVGLAVALRRAVLVPRGLWEAASTRASFVMNGGRMRLGVDIRGAKVSQADVMALGASGRVAGAAALPPPDRI-SKRQFLSMSAADKRAVLRAAGVRPPRXXXXXXXXXXXXXXGATEALDDLLLPLMDETVRRDVLIHRAVERENYAAAASLSEGKSERHVVAERLAEAVATEDFPLAARLRERLDWLQQLRADMTQDEGSYQKDLD 741 PD+V + G + SG + +V+ +E++ A L+ + V L+ AAS + R RL +D +V + AAA+PP + + +L++ K + A+G+ PPR EALD+LLLP +DE VRRDV I A+ + + A L+E +S R + L AVA ED+ AA L+ +L L + RAD++QDEGSY + LD Sbjct: 4 PDKVLVGGALLLSDPSGAAK-LVETFAEEAIAAATELQVPLTVDAELFAAASAKIRSFEVTSRGRLRIDTEAPEVPERK--------SAKAAAAVPPAWELRTAEDWLALDFRQKVEMALASGLTPPRRAR------------GEEALDELLLPNLDEDVRRDVQIMEAMRQGDMQEVARLTEERSRRGQLRNELRAAVADEDYSRAAELQRQLKILDRGRADVSQDEGSYDRFLD 218
BLAST of mRNA_P-wetherbeei_contig11620.1.1 vs. uniprot
Match: W7U3I9_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U3I9_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 9.600e-17 Identity = 80/230 (34.78%), Postives = 112/230 (48.70%), Query Frame = 1 Query: 76 PFSGGERRVVDCATDESVGLAVALRRAVLVPRGLWEAASTRASFVMNG---GRMRL---GVDIRGAKVSQADVMALGASGRVAGAAALPPPDRISKRQFLSMSAADKRAVLRAAGVR--PPRXXXXXXXXXXXXXXGATEALDDLLLPLMDETVRRDVLIHRAVERENYAAAASLSEGKSERHVVAERLAEAVATEDFPLAARLRERLDWLQQLRADMTQDEGSYQKDLD 741 P G +VDC DE VG A+AL RA+ +P L+E + + + G G ++L G A+ + ++M + + R P + S F SM + KR L +G P R + LD LLP +DETVRR+ I AVERE+++ ++L KSER V +RL A+A + + ARL E L + D TQDEGSYQKDLD Sbjct: 300 PSEQGRAMLVDCLIDEVVGFALALNRAIKMPVDLYEGTAVASRVLGRGSDDGILQLEAVGEGEEAAERRKENMMTVMENVR-------PAWEISSVEAFRSMDSRSKRLCLIKSGADAIPKRRQ-------------GPQELDIALLPYLDETVRREARIALAVEREDWSTVSALEANKSERGRVKDRLRAALAEGNAAVVARLEEEYVRLTVAKMDPTQDEGSYQKDLD 509 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11620.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig11620.1.1 >prot_P-wetherbeei_contig11620.1.1 ID=prot_P-wetherbeei_contig11620.1.1|Name=mRNA_P-wetherbeei_contig11620.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=247bp VTLGGAVYLEKLPDRVKILGENVPKPFSGGERRVVDCATDESVGLAVALRback to top mRNA from alignment at P-wetherbeei_contig11620:307..1546+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig11620.1.1 ID=mRNA_P-wetherbeei_contig11620.1.1|Name=mRNA_P-wetherbeei_contig11620.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1240bp|location=Sequence derived from alignment at P-wetherbeei_contig11620:307..1546+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig11620:307..1546+ >mRNA_P-wetherbeei_contig11620.1.1 ID=mRNA_P-wetherbeei_contig11620.1.1|Name=mRNA_P-wetherbeei_contig11620.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=741bp|location=Sequence derived from alignment at P-wetherbeei_contig11620:307..1546+ (Phaeothamnion wetherbeei SAG_119_79)back to top |