mRNA_P-wetherbeei_contig11603.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig11603.2.1
Unique NamemRNA_P-wetherbeei_contig11603.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig11603.2.1 vs. uniprot
Match: A0A7Z9PQL6_9BACT (Bifunctional nuclease family protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Z9PQL6_9BACT)

HSP 1 Score: 232 bits (592), Expect = 3.400e-76
Identity = 121/144 (84.03%), Postives = 135/144 (93.75%), Query Frame = 1
Query:    1 MRRMKVDKLGIDLLTHDPVVILKDLEGKRSLPILIGPFEATAIALALEGTQVPRPLSHDLMKSVIEALKAKVDRIVIHDIQENTFYAKVVLESALGTLEIDARPSDSIALALRTNSPIFVSERIILEETVEDKTEEKKDSNDFK 432
            MRRMKVDKLGIDLLTHDPVVILKD+EGKR LPILIGPFEATAIALALEGTQVPRPLSHDLMKS+IEALKAKV++IVIHDIQENTF+AKVVLES+LG LEIDARPSDSIALALRTNSPI+V+++IILEE+ E   E + + N+FK
Sbjct:    1 MRRMKVDKLGIDLLTHDPVVILKDMEGKRHLPILIGPFEATAIALALEGTQVPRPLSHDLMKSIIEALKAKVNKIVIHDIQENTFFAKVVLESSLGPLEIDARPSDSIALALRTNSPIYVTDQIILEESDEKGKEAQLEVNNFK 144          
BLAST of mRNA_P-wetherbeei_contig11603.2.1 vs. uniprot
Match: A0A1V5PJ87_9BACT (BFN domain-containing protein n=1 Tax=bacterium ADurb.Bin363 TaxID=1866927 RepID=A0A1V5PJ87_9BACT)

HSP 1 Score: 212 bits (540), Expect = 3.920e-68
Identity = 107/145 (73.79%), Postives = 129/145 (88.97%), Query Frame = 1
Query:    1 MRRMKVDKLGIDLLTHDPVVILKDLEGKRSLPILIGPFEATAIALALEGTQVPRPLSHDLMKSVIEALKAKVDRIVIHDIQENTFYAKVVLESALG-TLEIDARPSDSIALALRTNSPIFVSERIILEETVEDKTEEKKDSNDFK 432
            M+RM+VDKLGIDLLTHDPV++LKD++GKR LPILIGPFEATAIALALEGT+VPRPLSHDLMKS+I++LK KV +IVIHDI+ENTFYAK+++E A    +EIDARPSDSIALALR  +PIFVSE+I+LEETV DK  E+++   FK
Sbjct:    1 MKRMQVDKLGIDLLTHDPVIVLKDVDGKRYLPILIGPFEATAIALALEGTEVPRPLSHDLMKSIIDSLKGKVQKIVIHDIKENTFYAKIIIEIANNEVVEIDARPSDSIALALRVKAPIFVSEKIVLEETVVDKVAEEQERKKFK 145          
BLAST of mRNA_P-wetherbeei_contig11603.2.1 vs. uniprot
Match: A0A522QIZ1_9BACT (Bifunctional nuclease family protein n=3 Tax=bacterium TaxID=1869227 RepID=A0A522QIZ1_9BACT)

HSP 1 Score: 204 bits (519), Expect = 3.780e-65
Identity = 104/144 (72.22%), Postives = 126/144 (87.50%), Query Frame = 1
Query:    1 MRRMKVDKLGIDLLTHDPVVILKDLEGKRSLPILIGPFEATAIALALEGTQVPRPLSHDLMKSVIEALKAKVDRIVIHDIQENTFYAKVVLESALGTLEIDARPSDSIALALRTNSPIFVSERIILEETVEDKTEEKKDSNDFK 432
            MR+MKVDKLGIDLLTHDPVVILKDLEGKR LPILIGPFEATAIALALEGTQ PRPLSHDLMKS++E L+AK+ ++V+HDI+++TFYA++V+E+   T EIDARPSD+IALALR  +PI+VS++I LEETV DK  E ++   FK
Sbjct:    1 MRQMKVDKLGIDLLTHDPVVILKDLEGKRYLPILIGPFEATAIALALEGTQAPRPLSHDLMKSILETLEAKLVQVVVHDIKDSTFYARLVVEADGETEEIDARPSDAIALALRVGAPIYVSDKIALEETVYDKKAEAEEKQRFK 144          
BLAST of mRNA_P-wetherbeei_contig11603.2.1 vs. uniprot
Match: A0A7X9AGW6_9BURK (Bifunctional nuclease family protein n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X9AGW6_9BURK)

HSP 1 Score: 201 bits (510), Expect = 8.580e-64
Identity = 104/141 (73.76%), Postives = 123/141 (87.23%), Query Frame = 1
Query:   10 MKVDKLGIDLLTHDPVVILKDLEGKRSLPILIGPFEATAIALALEGTQVPRPLSHDLMKSVIEALKAKVDRIVIHDIQENTFYAKVVLESALGTLEIDARPSDSIALALRTNSPIFVSERIILEETVEDKTEEKKDSNDFK 432
            MKV+KLGIDLLTHDPVVILKD++GK  LPILIGPFEATAIALALE   VPRPLSHDLMKS+IE+L A+V+++VI DI+ENTF+AKV+L +    +EIDARPSDSIALALRTNSPIFVSE+IIL E +EDK+ E +D+  FK
Sbjct:    1 MKVNKLGIDLLTHDPVVILKDVDGKHQLPILIGPFEATAIALALEKQVVPRPLSHDLMKSIIESLDAQVEKVVIDDIKENTFFAKVILRAGGDPVEIDARPSDSIALALRTNSPIFVSEQIILAEALEDKSAEDQDATAFK 141          
BLAST of mRNA_P-wetherbeei_contig11603.2.1 vs. uniprot
Match: A0A2W5XPK8_9BACT (BFN domain-containing protein n=1 Tax=Candidatus Eremiobacter sp. RRmetagenome_bin22 TaxID=2599629 RepID=A0A2W5XPK8_9BACT)

HSP 1 Score: 201 bits (510), Expect = 8.860e-64
Identity = 104/143 (72.73%), Postives = 122/143 (85.31%), Query Frame = 1
Query:    1 MRRMKVDKLGIDLLTHDPVVILKDLEGKRSLPILIGPFEATAIALALEGTQVPRPLSHDLMKSVIEALKAKVDRIVIHDIQENTFYAKVVLESALGTLEIDARPSDSIALALRTNSPIFVSERIILEETVEDKTEEKKDSNDF 429
            MR+MKVDKLGIDLLTHDPVVILKDLEGKR LPILIGPFEATAI LALE   VPRPLSHDLMKS++E L AK+ +IVIHDI+++TFYAK+V+E+     EIDARPSD IALALRTNSPIFV+++I LEE+V DK  E+++   F
Sbjct:    1 MRQMKVDKLGIDLLTHDPVVILKDLEGKRYLPILIGPFEATAIMLALEAQSVPRPLSHDLMKSILEGLNAKLTKIVIHDIKDSTFYAKLVVEAGGEDQEIDARPSDCIALALRTNSPIFVTDKIALEESVYDKKTEEEEMQRF 143          
BLAST of mRNA_P-wetherbeei_contig11603.2.1 vs. uniprot
Match: A0A2W5Y2Z7_9BACT (BFN domain-containing protein n=1 Tax=Candidatus Eremiobacteraeota bacterium TaxID=2052317 RepID=A0A2W5Y2Z7_9BACT)

HSP 1 Score: 192 bits (489), Expect = 1.440e-60
Identity = 96/130 (73.85%), Postives = 117/130 (90.00%), Query Frame = 1
Query:    1 MRRMKVDKLGIDLLTHDPVVILKDLEGKRSLPILIGPFEATAIALALEGTQVPRPLSHDLMKSVIEALKAKVDRIVIHDIQENTFYAKVVLESALGTLEIDARPSDSIALALRTNSPIFVSERIILEETV 390
            MR+MKVDKLGIDLLTHDPVVILKDLEGKR LPILIGPFEAT+IALALEG  VPRPLSHDLM+S++E L+A++++IVIHDI+E+TF+AK+V+ +     EIDARPSD IALALR  +PIFVS++I+LEE+V
Sbjct:    1 MRQMKVDKLGIDLLTHDPVVILKDLEGKRFLPILIGPFEATSIALALEGAPVPRPLSHDLMRSMLETLEARLEQIVIHDIRESTFFAKLVIRTNGEVQEIDARPSDGIALALRMKAPIFVSDKIVLEESV 130          
BLAST of mRNA_P-wetherbeei_contig11603.2.1 vs. uniprot
Match: E6PHD1_9ZZZZ (BFN domain-containing protein n=4 Tax=root TaxID=1 RepID=E6PHD1_9ZZZZ)

HSP 1 Score: 160 bits (404), Expect = 1.100e-47
Identity = 78/126 (61.90%), Postives = 102/126 (80.95%), Query Frame = 1
Query:   10 MKVDKLGIDLLTHDPVVILKDLEGKRSLPILIGPFEATAIALALEGTQVPRPLSHDLMKSVIEALKAKVDRIVIHDIQENTFYAKVVLESALGTLEIDARPSDSIALALRTNSPIFVSERIILEET 387
            MKVDKLGID LTH+PVVILK ++G   LPILIGPFEA AI+  LEG   PRPLSHDLM SV+E L+  ++++VIHDI+++TF+AK+V+ +     EIDARPSD IALALR  +PI+V+++I+LEE+
Sbjct:    1 MKVDKLGIDSLTHEPVVILKAVDGMHFLPILIGPFEAAAISHVLEGGHAPRPLSHDLMLSVVETLEGTIEQVVIHDIRDSTFFAKLVVRAGGELKEIDARPSDGIALALRAKAPIYVTDKIVLEES 126          
BLAST of mRNA_P-wetherbeei_contig11603.2.1 vs. uniprot
Match: A0A7C1IW44_9FIRM (Bifunctional nuclease family protein n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A7C1IW44_9FIRM)

HSP 1 Score: 149 bits (375), Expect = 2.960e-43
Identity = 75/144 (52.08%), Postives = 104/144 (72.22%), Query Frame = 1
Query:    1 MRRMKVDKLGIDLLTHDPVVILKDLEGKRSLPILIGPFEATAIALALEGTQVPRPLSHDLMKSVIEALKAKVDRIVIHDIQENTFYAKVVLESALGTLEIDARPSDSIALALRTNSPIFVSERIILEETVEDKTEEKKDSNDFK 432
            M  MKV+ L ID  T  PVVIL D + KR LPI IG +EA AI +ALE   VPRP++HDL+K ++ AL    +R+VIHDI++NTF+A+V+L+      E+D+RPSD+IALALR N+PIFV+E +I+E T+ DK +  ++  +FK
Sbjct:    1 MIEMKVNGLAIDSTTRMPVVILTDKDEKRFLPIWIGVYEADAILVALEHIDVPRPMTHDLIKGIVSALDVTAERVVIHDIKKNTFFARVLLKKGKENFEVDSRPSDAIALALRLNAPIFVTENVIMEATIMDKEKAAREMEEFK 144          
BLAST of mRNA_P-wetherbeei_contig11603.2.1 vs. uniprot
Match: A0A7C7DJP1_9FIRM (Bifunctional nuclease family protein n=1 Tax=Clostridia bacterium TaxID=2044939 RepID=A0A7C7DJP1_9FIRM)

HSP 1 Score: 146 bits (368), Expect = 1.970e-42
Identity = 73/127 (57.48%), Postives = 101/127 (79.53%), Query Frame = 1
Query:    1 MRRMKVDKLGIDLLTHDPVVILKDLEGKRSLPILIGPFEATAIALALEGTQVPRPLSHDLMKSVIEALKAKVDRIVIHDIQENTFYAKVVLESALGTLEIDARPSDSIALALRTNSPIFVSERIILE 381
            M +M+VDK+ +++     VVILKD+EGK+ LPI IG  EAT+IAL +EG +  RPLSHDLMKS+I AL A+V  ++I+D+++NTFY +V+L +   T+EIDARPSD+IALALRT +PIFVSE+++ E
Sbjct:    1 MLQMRVDKVAMEVEGEQSVVILKDIEGKQMLPIWIGMLEATSIALEVEGIKPARPLSHDLMKSIISALGAEVTMVLIYDLKDNTFYGQVLLRAGDDTIEIDARPSDAIALALRTGAPIFVSEKVMEE 127          
BLAST of mRNA_P-wetherbeei_contig11603.2.1 vs. uniprot
Match: A0A0S3QSG4_THET7 (BFN domain-containing protein n=2 Tax=Thermosulfidibacter takaii TaxID=412593 RepID=A0A0S3QSG4_THET7)

HSP 1 Score: 145 bits (367), Expect = 4.420e-42
Identity = 68/122 (55.74%), Postives = 99/122 (81.15%), Query Frame = 1
Query:   10 MKVDKLGIDLLTHDPVVILKDLEGKRSLPILIGPFEATAIALALEGTQVPRPLSHDLMKSVIEALKAKVDRIVIHDIQENTFYAKVVLESALGTLEIDARPSDSIALALRTNSPIFVSERII 375
            MKV K+ +D  T+ P+V+LKD+E +R+LPI IG FEA AIA+ LE    PRP++HDL+ +++E+LKA V+RIV++D+ ENTFYA++ L +  GT+EID+RPSD+IA+ALRT++PIFV E ++
Sbjct:    1 MKVAKIILDPFTNSPIVVLKDMEERRALPIWIGLFEANAIAMKLEDVVTPRPMTHDLIANILESLKATVERIVVNDLIENTFYARICLSTPEGTMEIDSRPSDAIAIALRTDAPIFVEEVVL 122          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11603.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7Z9PQL6_9BACT3.400e-7684.03Bifunctional nuclease family protein n=1 Tax=Phyci... [more]
A0A1V5PJ87_9BACT3.920e-6873.79BFN domain-containing protein n=1 Tax=bacterium AD... [more]
A0A522QIZ1_9BACT3.780e-6572.22Bifunctional nuclease family protein n=3 Tax=bacte... [more]
A0A7X9AGW6_9BURK8.580e-6473.76Bifunctional nuclease family protein n=1 Tax=Burkh... [more]
A0A2W5XPK8_9BACT8.860e-6472.73BFN domain-containing protein n=1 Tax=Candidatus E... [more]
A0A2W5Y2Z7_9BACT1.440e-6073.85BFN domain-containing protein n=1 Tax=Candidatus E... [more]
E6PHD1_9ZZZZ1.100e-4761.90BFN domain-containing protein n=4 Tax=root TaxID=1... [more]
A0A7C1IW44_9FIRM2.960e-4352.08Bifunctional nuclease family protein n=1 Tax=Firmi... [more]
A0A7C7DJP1_9FIRM1.970e-4257.48Bifunctional nuclease family protein n=1 Tax=Clost... [more]
A0A0S3QSG4_THET74.420e-4255.74BFN domain-containing protein n=2 Tax=Thermosulfid... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11603contigP-wetherbeei_contig11603:1691..2122 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog309799.DICTH_0691
PFAMsDNase-RNase,UVR
Model size432
Max annot lvl2|Bacteria
KEGG koko:K03617,ko:K08999
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944
Exons1
Evalue1.22e-39
EggNOG OGsCOG1259@1|root,COG1259@2|Bacteria
DescriptionPFAM Uncharacterised ACR, COG1259
Cds size432
COG categoryK
BRITEko00000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185918.4705198-CDS-P-wetherbeei_contig11603:1690..21221683185918.4705198-CDS-P-wetherbeei_contig11603:1690..2122Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11603 1691..2122 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11603.2.1prot_P-wetherbeei_contig11603.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig11603 1691..2122 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig11603.2.1

>prot_P-wetherbeei_contig11603.2.1 ID=prot_P-wetherbeei_contig11603.2.1|Name=mRNA_P-wetherbeei_contig11603.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=144bp
MRRMKVDKLGIDLLTHDPVVILKDLEGKRSLPILIGPFEATAIALALEGT
QVPRPLSHDLMKSVIEALKAKVDRIVIHDIQENTFYAKVVLESALGTLEI
DARPSDSIALALRTNSPIFVSERIILEETVEDKTEEKKDSNDFK
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mRNA from alignment at P-wetherbeei_contig11603:1691..2122+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig11603.2.1 ID=mRNA_P-wetherbeei_contig11603.2.1|Name=mRNA_P-wetherbeei_contig11603.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=432bp|location=Sequence derived from alignment at P-wetherbeei_contig11603:1691..2122+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCGCCGAATGAAAGTGGATAAGCTGGGGATCGATCTTTTGACTCACGA CCCCGTGGTTATCCTCAAAGACCTTGAAGGCAAACGGTCTTTGCCTATTT TAATCGGACCTTTCGAGGCAACCGCCATCGCGCTCGCACTCGAAGGCACG CAGGTGCCCCGTCCGCTTTCTCACGATCTGATGAAATCCGTCATCGAGGC TCTTAAGGCCAAGGTTGACCGTATCGTAATCCACGATATTCAAGAAAACA CGTTTTACGCAAAGGTCGTTCTCGAGTCTGCGCTTGGGACTCTCGAAATC GACGCTCGGCCCAGCGACAGCATTGCTCTCGCGCTGCGCACCAATTCGCC TATCTTCGTCAGCGAGCGCATCATTTTGGAGGAGACGGTCGAAGACAAGA CCGAGGAGAAAAAAGACTCCAACGACTTCAAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig11603:1691..2122+

>mRNA_P-wetherbeei_contig11603.2.1 ID=mRNA_P-wetherbeei_contig11603.2.1|Name=mRNA_P-wetherbeei_contig11603.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=432bp|location=Sequence derived from alignment at P-wetherbeei_contig11603:1691..2122+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCGCCGAATGAAAGTGGATAAGCTGGGGATCGATCTTTTGACTCACGA
CCCCGTGGTTATCCTCAAAGACCTTGAAGGCAAACGGTCTTTGCCTATTT
TAATCGGACCTTTCGAGGCAACCGCCATCGCGCTCGCACTCGAAGGCACG
CAGGTGCCCCGTCCGCTTTCTCACGATCTGATGAAATCCGTCATCGAGGC
TCTTAAGGCCAAGGTTGACCGTATCGTAATCCACGATATTCAAGAAAACA
CGTTTTACGCAAAGGTCGTTCTCGAGTCTGCGCTTGGGACTCTCGAAATC
GACGCTCGGCCCAGCGACAGCATTGCTCTCGCGCTGCGCACCAATTCGCC
TATCTTCGTCAGCGAGCGCATCATTTTGGAGGAGACGGTCGAAGACAAGA
CCGAGGAGAAAAAAGACTCCAACGACTTCAAG
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