mRNA_P-wetherbeei_contig1157.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1157.2.1 vs. uniprot
Match: D7G7I6_ECTSI (Glutaredoxin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7I6_ECTSI) HSP 1 Score: 172 bits (437), Expect = 1.920e-47 Identity = 82/108 (75.93%), Postives = 89/108 (82.41%), Query Frame = 3 Query: 579 QKGRVTVYHKTTCPYCKEVLQLLEGDYGLEVTCVDVLEGEDSDQKIKQMRTFSGGRNTVPQVFFNSEHLGGNDDVQALHRAGKLEGLVAKVREEASAVMKDGWYHPWY 902 Q G VTVYHK TCPYCK+ L LLE DY L+VT V+VLEGEDS++KIKQM+TFSG NTVPQVFFNSEHLGGNDDVQ LH GKLE LV KVR EA +MKD WYHPWY Sbjct: 65 QAGLVTVYHKETCPYCKKALALLENDYSLQVTRVNVLEGEDSEKKIKQMKTFSGA-NTVPQVFFNSEHLGGNDDVQKLHEDGKLEELVKKVRAEAPGMMKDSWYHPWY 171
BLAST of mRNA_P-wetherbeei_contig1157.2.1 vs. uniprot
Match: A0A836CJB3_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJB3_9STRA) HSP 1 Score: 170 bits (431), Expect = 2.410e-47 Identity = 84/116 (72.41%), Postives = 92/116 (79.31%), Query Frame = 3 Query: 555 SATDAPVTQKGRVTVYHKTTCPYCKEVLQLLEGDYGLEVTCVDVLEGEDSDQKIKQMRTFSGGRNTVPQVFFNSEHLGGNDDVQALHRAGKLEGLVAKVREEASAVMKDGWYHPWY 902 SA Q G VTVYHK TCP+CK+VL+LLEGDYGLEVT VDVL GEDSD+ +KQMRTFSGGRNTVPQVFFNS HLGGNDDVQALH G+LE LV + E A +K GWYHPWY Sbjct: 2 SAVATATEQLGLVTVYHKETCPHCKKVLELLEGDYGLEVTKVDVL-GEDSDKVLKQMRTFSGGRNTVPQVFFNSHHLGGNDDVQALHAEGELEKLVESILSEP-ATLKKGWYHPWY 115
BLAST of mRNA_P-wetherbeei_contig1157.2.1 vs. uniprot
Match: A0A835ZFR3_9STRA (Glutaredoxin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFR3_9STRA) HSP 1 Score: 167 bits (423), Expect = 1.910e-45 Identity = 80/117 (68.38%), Postives = 91/117 (77.78%), Query Frame = 3 Query: 552 TSATDAPVTQKGRVTVYHKTTCPYCKEVLQLLEGDYGLEVTCVDVLEGEDSDQKIKQMRTFSGGRNTVPQVFFNSEHLGGNDDVQALHRAGKLEGLVAKVREEASAVMKDGWYHPWY 902 T +T V Q+G VTVYHK TCPYC +VL LLE +Y L V V+VLEG+DSD+KIKQMRTFSGGRNTVPQVFFNSEHLGGNDDVQ+LH GKL LV + + A +K GWYHPWY Sbjct: 54 TMSTGTAVEQRGLVTVYHKETCPYCVKVLHLLENEYNLSVNRVNVLEGDDSDKKIKQMRTFSGGRNTVPQVFFNSEHLGGNDDVQSLHSEGKLAELVETILSQ-DASLKAGWYHPWY 169
BLAST of mRNA_P-wetherbeei_contig1157.2.1 vs. uniprot
Match: A0A6S9FTA2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9FTA2_HETAK) HSP 1 Score: 137 bits (346), Expect = 1.440e-34 Identity = 67/110 (60.91%), Postives = 81/110 (73.64%), Query Frame = 3 Query: 579 QKGRVTVYHKTTCPYCKEVLQLLEGDYGLEVTCVDVLEGEDSDQKIKQ--MRTFSGGRNTVPQVFFNSEHLGGNDDVQALHRAGKLEGLVAKVREEASAVMKDGWYHPWY 902 Q G VT+Y K+TCP+CKE LLEG+YGL +T VDVLEGE+ +QK KQ M+ FS R TVPQ+FFNS+HLGGNDDVQ LHR G L LVA + E + + +GWYHP Y Sbjct: 51 QAGIVTMYIKSTCPFCKEAKALLEGEYGLNLTVVDVLEGEEGEQKAKQRQMKQFSF-RKTVPQIFFNSKHLGGNDDVQTLHREGALAALVAAMNAEGTPRLDEGWYHPHY 159
BLAST of mRNA_P-wetherbeei_contig1157.2.1 vs. uniprot
Match: A0A7S1XU45_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XU45_9STRA) HSP 1 Score: 132 bits (332), Expect = 9.410e-33 Identity = 68/141 (48.23%), Postives = 90/141 (63.83%), Query Frame = 3 Query: 486 IARAAPGGAPRHSLGKRSLAPRTSATDAPVTQKGRVTVYHKTTCPYCKEVLQLLEGDYGLEVTCVDVLEGEDSDQK--IKQMRTFSGGRNTVPQVFFNSEHLGGNDDVQALHRAGKLEGLVAKVREEASAVMKDGWYHPWY 902 IA A G A + R+ A R + Q GRVT Y + CP+C + +LLE Y E+T V++ EG++ +QK I+ M T+SGGR TVPQ+FFNSEH+GGNDDVQ LH GKL+ ++ +VR A M+DGWYHP Y Sbjct: 8 IAAALLGAAAAFAPAPRAGAMRRGSVSMAAEQAGRVTFYMRDGCPFCAKAKELLEDTYDAELTLVNIWEGDEDEQKKKIRSMTTYSGGRQTVPQIFFNSEHIGGNDDVQGLHADGKLQAMLDEVRS-TPATMRDGWYHPHY 147
BLAST of mRNA_P-wetherbeei_contig1157.2.1 vs. uniprot
Match: A0A7S1U9K7_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U9K7_9STRA) HSP 1 Score: 131 bits (329), Expect = 1.730e-32 Identity = 60/110 (54.55%), Postives = 79/110 (71.82%), Query Frame = 3 Query: 579 QKGRVTVYHKTTCPYCKEVLQLLEGDYGLEVTCVDVLEGEDSDQK--IKQMRTFSGGRNTVPQVFFNSEHLGGNDDVQALHRAGKLEGLVAKVREEASAVMKDGWYHPWY 902 Q GRVT Y + CP+C + +LLE Y E+T V++ EG++ +QK I+ M T+SGGR TVPQ+FFNSEH+GGNDDVQ LH GKL+ ++ +VR A M+DGWYHP Y Sbjct: 27 QAGRVTFYMRDGCPFCAKAKELLEDTYDAELTLVNIWEGDEDEQKKKIRSMTTYSGGRQTVPQIFFNSEHIGGNDDVQGLHADGKLQAMLDEVRS-TPATMRDGWYHPHY 135
BLAST of mRNA_P-wetherbeei_contig1157.2.1 vs. uniprot
Match: A0A4S8KT64_DENBC (Glutaredoxin n=1 Tax=Dendrothele bispora (strain CBS 962.96) TaxID=1314807 RepID=A0A4S8KT64_DENBC) HSP 1 Score: 75.9 bits (185), Expect = 3.610e-13 Identity = 36/85 (42.35%), Postives = 53/85 (62.35%), Query Frame = 3 Query: 591 VTVYHKTTCPYCKEVLQLLEGDYGLEVTCVDVLEGEDSDQKIKQMRTFSGGRNTVPQVFFNSEHLGGNDDVQALHRAGKLEGLVA 845 +TV+ K+ CPYCK +LL+ YG + T V L+ + +I+ G+ TVP +F N +H+GGND VQA H+ GKL+ L+A Sbjct: 16 ITVFSKSWCPYCKAAKKLLQESYGDKKTEVVELDEREDGDEIQSYLQEKTGQRTVPNIFVNKQHVGGNDAVQAAHKNGKLKELLA 100
BLAST of mRNA_P-wetherbeei_contig1157.2.1 vs. uniprot
Match: UPI00156EC5FB (glutaredoxin 3 n=1 Tax=Microvirga ossetica TaxID=1882682 RepID=UPI00156EC5FB) HSP 1 Score: 74.3 bits (181), Expect = 7.670e-13 Identity = 40/85 (47.06%), Postives = 55/85 (64.71%), Query Frame = 3 Query: 591 VTVYHKTTCPYCKEVLQLLEGDYGLEVTCVDVLEGEDSDQKIKQMRTFSGGRNTVPQVFFNSEHLGGNDDVQALHRAGKLEGLVA 845 +T++ T CPYCK LL + G++ T +DV G+D+D K M SGGR TVPQ+FF H+GG DD+ AL R+G+L LV+ Sbjct: 1 MTIFTTTECPYCKAAKALLS-ERGIDFTEIDV--GKDADAA-KSMVLRSGGRQTVPQIFFGQRHVGGADDLAALDRSGELSKLVS 81
BLAST of mRNA_P-wetherbeei_contig1157.2.1 vs. uniprot
Match: D8PXD5_SCHCM (Glutaredoxin domain-containing protein n=1 Tax=Schizophyllum commune (strain H4-8 / FGSC 9210) TaxID=578458 RepID=D8PXD5_SCHCM) HSP 1 Score: 75.1 bits (183), Expect = 9.830e-13 Identity = 37/88 (42.05%), Postives = 55/88 (62.50%), Query Frame = 3 Query: 591 VTVYHKTTCPYCKEVLQLLEGDYG---LEVTCVDVLEGEDSDQKIKQMRTFSGGRNTVPQVFFNSEHLGGNDDVQALHRAGKLEGLVA 845 +TV+ K+ CPYC+ LL+ +Y +E+ +D LE + Q + +T G+ TVP +F +H+GGNDD QA HRAGKL+ L+A Sbjct: 30 ITVFSKSYCPYCRSAKSLLQKEYADQDIEIVELDQLEDGSTIQDALEDKT---GQRTVPNIFVKKQHIGGNDDTQAAHRAGKLKELLA 114
BLAST of mRNA_P-wetherbeei_contig1157.2.1 vs. uniprot
Match: A0A1Z3U8B8_BREVE (Glutaredoxin n=34 Tax=Bacteria TaxID=2 RepID=A0A1Z3U8B8_BREVE) HSP 1 Score: 72.8 bits (177), Expect = 2.820e-12 Identity = 36/85 (42.35%), Postives = 55/85 (64.71%), Query Frame = 3 Query: 591 VTVYHKTTCPYCKEVLQLLEGDYGLEVTCVDVLEGEDSDQKIKQMRTFSGGRNTVPQVFFNSEHLGGNDDVQALHRAGKLEGLVA 845 V +Y K CPYC + LL+ G++ T +++ D D+K + + SGGR T PQ+F + +H+GG+DD+ AL R GKL+GL+A Sbjct: 4 VVIYTKPGCPYCFSAMSLLKKK-GVDYT--EIVASNDPDKKAEMVEK-SGGRMTFPQIFIDGQHIGGSDDIHALDRDGKLDGLLA 84 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1157.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1157.2.1 >prot_P-wetherbeei_contig1157.2.1 ID=prot_P-wetherbeei_contig1157.2.1|Name=mRNA_P-wetherbeei_contig1157.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=178bp MVRFTAALLAAAGLVNAASAFAIVPAPSSAYAVAPRAAIARAAPGGAPRHback to top mRNA from alignment at P-wetherbeei_contig1157:3642..5826- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1157.2.1 ID=mRNA_P-wetherbeei_contig1157.2.1|Name=mRNA_P-wetherbeei_contig1157.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2185bp|location=Sequence derived from alignment at P-wetherbeei_contig1157:3642..5826- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1157:3642..5826- >mRNA_P-wetherbeei_contig1157.2.1 ID=mRNA_P-wetherbeei_contig1157.2.1|Name=mRNA_P-wetherbeei_contig1157.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=534bp|location=Sequence derived from alignment at P-wetherbeei_contig1157:3642..5826- (Phaeothamnion wetherbeei SAG_119_79)back to top |