mRNA_P-wetherbeei_contig11531.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig11531.3.1
Unique NamemRNA_P-wetherbeei_contig11531.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig11531.3.1 vs. uniprot
Match: A0A6H5KCH7_9PHAE (AB hydrolase-1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KCH7_9PHAE)

HSP 1 Score: 137 bits (344), Expect = 1.330e-35
Identity = 74/179 (41.34%), Postives = 103/179 (57.54%), Query Frame = 1
Query:   25 VCFLCMLLLLRKRRMQKLVESCFARLDSVGYRRDHALRYFPTTLHAMAAEKKQYLIFLPFPPVLS---------LLASQPYRKGFLFLGGFGDTPALWKFLTPFIQDAGHLFVCPRTPGWGRSDFDEVMAVSWREWVLSGLEAVAVLKGLCDEVVIVGHSTGALVAAMVAEREPVSRLV 534
            V  LC +LL R +++ +   +CF R++ VG+R D  LR         A +K   L   P PP  +         L   +P+ KG + +GGFGD P +W+ L      AG   + PRTPGWGR+DF E   V W +WVL+  + +AV +GLCDEV +V HSTGA VAA+VAE +P+ RL+
Sbjct:   24 VSLLCTVLLWRTQKVCRDTAACFDRIEMVGFRSDPQLR---------ALDKSIALSVPPLPPPTAATPGAARAVLPRKKPFEKGLVLIGGFGDMPCMWEGLAERASKAGWYTLAPRTPGWGRTDFREANKVCWTDWVLACRDGLAVARGLCDEVTVVAHSTGAPVAALVAETQPIDRLI 193          
BLAST of mRNA_P-wetherbeei_contig11531.3.1 vs. uniprot
Match: A0A6V1PQ32_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PQ32_HETAK)

HSP 1 Score: 108 bits (269), Expect = 1.010e-24
Identity = 54/113 (47.79%), Postives = 70/113 (61.95%), Query Frame = 1
Query:  181 QYLIFLPFPPVLSLLASQPYRKGFLFLGGFGDTPALWKFLTPFIQDAGHLFVC--PRTPGWGRSDFDEVMAVSWREWVLSGLEAVAVLKGLCDEVVIVGHSTGALVAAMVAER 513
            Q L  L F   +    S+PY +GF+F+GGFGDTPA+WK    +I+       C  PRT GWGRS FDE   V W+ WVL+  EA+ V+  +   VV+VGHSTGAL AA+  +R
Sbjct:   63 QQLEALRFSKSIVESGSKPYSQGFVFVGGFGDTPAIWKEAIAYIKSNDPKAFCYAPRTVGWGRSTFDEARKVQWQTWVLAAAEAIQVVAAVSGRVVVVGHSTGALAAALALQR 175          
BLAST of mRNA_P-wetherbeei_contig11531.3.1 vs. uniprot
Match: UPI0006D5434B (alpha/beta fold hydrolase n=1 Tax=Numidum massiliense TaxID=1522315 RepID=UPI0006D5434B)

HSP 1 Score: 65.1 bits (157), Expect = 1.340e-9
Identity = 36/96 (37.50%), Postives = 50/96 (52.08%), Query Frame = 1
Query:  247 GFLFLGGFGDTPALWKFLTPFIQDAGHLFVCPRTPGWGRSDFDEVMAVSWREWVLSGLEAVAVLKGLCDEVVIVGHSTGALVAAMVAEREPVSRLV 534
            G L L GF  +P   + L  +++  G   + P   G G      +  V W+EWV S  EA+  L   CD V ++GHS G L+AA +A R PV +LV
Sbjct:    3 GCLLLHGFTASPLEVEPLKQYLETCGLYVIAPTLAGHGEDHQQTLENVVWQEWVKSAEEALIDLVARCDTVYVLGHSMGGLIAAYLANRYPVQKLV 98          
BLAST of mRNA_P-wetherbeei_contig11531.3.1 vs. uniprot
Match: A8F880_PSELT (Alpha/beta hydrolase fold domain-containing protein n=2 Tax=Pseudothermotoga TaxID=1643951 RepID=A8F880_PSELT)

HSP 1 Score: 63.9 bits (154), Expect = 4.830e-9
Identity = 35/98 (35.71%), Postives = 55/98 (56.12%), Query Frame = 1
Query:  241 RKGFLFLGGFGDTPALWKFLTPFIQDAGHLFVCPRTPGWGRSDFDEVMAVSWREWVLSGLEAVAVLKGLCDEVVIVGHSTGALVAAMVAEREPVSRLV 534
            +KG L + GF  +P    ++   + D G     PR PG G S  D + + +W++WV   ++A   L   CDE+ +VG S GAL+AA+VA R  + ++V
Sbjct:   26 KKGVLLIHGFTGSPHDMIYVAQRLFDEGFTVSVPRLPGHGTSHRDFLNS-TWKDWVRRSIDAYLDLTNFCDEISVVGLSMGALLAAVVASRFKIRKVV 122          
BLAST of mRNA_P-wetherbeei_contig11531.3.1 vs. uniprot
Match: A0A2M8FME1_9BACT (AB hydrolase-1 domain-containing protein n=5 Tax=unclassified Ignavibacteria TaxID=1798416 RepID=A0A2M8FME1_9BACT)

HSP 1 Score: 62.0 bits (149), Expect = 3.610e-8
Identity = 32/98 (32.65%), Postives = 57/98 (58.16%), Query Frame = 1
Query:  241 RKGFLFLGGFGDTPALWKFLTPFIQDAGHLFVCPRTPGWGRSDFDEVMAVSWREWVLSGLEAVAVLKGLCDEVVIVGHSTGALVAAMVAEREPVSRLV 534
            + G L L GF  +P  ++F+ P +++    F  PR  G+G ++   + +V   +W+   L+A  +L    +EV IVGHS G L+A++V+++  V +LV
Sbjct:   91 KHGVLLLHGFSASPQEFRFIIPLLKENNIPFYAPRLTGFGVANVVTLQSVKAVQWLRDSLDAFDLLIQQVEEVSIVGHSMGGLLASLVSQQRNVKKLV 188          
BLAST of mRNA_P-wetherbeei_contig11531.3.1 vs. uniprot
Match: A0A8J7CZ08_9FIRM (Alpha/beta fold hydrolase n=1 Tax=Quinella sp. 3Q1 TaxID=1958791 RepID=A0A8J7CZ08_9FIRM)

HSP 1 Score: 60.5 bits (145), Expect = 7.940e-8
Identity = 29/97 (29.90%), Postives = 53/97 (54.64%), Query Frame = 1
Query:  244 KGFLFLGGFGDTPALWKFLTPFIQDAGHLFVCPRTPGWGRSDFDEVMAVSWREWVLSGLEAVAVLKGLCDEVVIVGHSTGALVAAMVAEREPVSRLV 534
             G L + GF   P     L  ++  AG   +CPR  G G ++ D +M  +  +W  S L+   +L+G+CDE+ ++GHS G ++   ++  + +S++V
Sbjct:   17 SGVLLVHGFTGLPVELLLLGEYLNRAGFNVLCPRLAGHGTNEQD-LMRTTRDDWFNSVLDGYFILRGVCDEIFVIGHSMGGILTLKLSTEQKISKIV 112          
BLAST of mRNA_P-wetherbeei_contig11531.3.1 vs. uniprot
Match: A0A8J7CN40_9FIRM (Alpha/beta fold hydrolase n=1 Tax=Quinella sp. 3Q1 TaxID=1958791 RepID=A0A8J7CN40_9FIRM)

HSP 1 Score: 59.7 bits (143), Expect = 1.480e-7
Identity = 32/97 (32.99%), Postives = 52/97 (53.61%), Query Frame = 1
Query:  244 KGFLFLGGFGDTPALWKFLTPFIQDAGHLFVCPRTPGWGRSDFDEVMAVSWREWVLSGLEAVAVLKGLCDEVVIVGHSTGALVAAMVAEREPVSRLV 534
             G L + GF   PA    L  F+   G   +C R  G   +D D++M  +  +W  S L+   +L+G+CDE+ +VGHS G L+   +A  + V+++V
Sbjct:   15 SGVLLVHGFTGLPAELFLLGEFLNREGFSVLCMRLAGHA-TDEDDLMRTTRGDWFNSVLDGFYILRGVCDEIFVVGHSMGGLLTLKLASEKDVAKIV 110          
BLAST of mRNA_P-wetherbeei_contig11531.3.1 vs. uniprot
Match: A0A7T1M949_9SYNE (Alpha/beta fold hydrolase n=1 Tax=Synechococcus sp. CBW1107 TaxID=2789857 RepID=A0A7T1M949_9SYNE)

HSP 1 Score: 59.3 bits (142), Expect = 2.260e-7
Identity = 31/91 (34.07%), Postives = 48/91 (52.75%), Query Frame = 1
Query:  247 GFLFLGGFGDTPALWKFLTPFIQDAGHLFVCPRTPGWGRSDFDEVMAVSWREWVLSGLEAVAVLKGLCDEVVIVGHSTGALVAAMVAEREP 519
            G L L GF  + A +  L P +  AG +   P   G G      +  V+W +W+     A+A L+ L   V+++GHS GAL+AA++A  +P
Sbjct:   11 GLLLLHGFSGSTATFADLEPELVQAGVVVKAPLLRGHGHDSPQALAGVTWSDWLDDASIALAELRALAGPVIVLGHSMGALIAALLAVEQP 101          
BLAST of mRNA_P-wetherbeei_contig11531.3.1 vs. uniprot
Match: A0A8J6ZNG3_9FIRM (Alpha/beta fold hydrolase n=1 Tax=Quinella sp. 1Q7 TaxID=1958789 RepID=A0A8J6ZNG3_9FIRM)

HSP 1 Score: 58.9 bits (141), Expect = 2.790e-7
Identity = 33/97 (34.02%), Postives = 51/97 (52.58%), Query Frame = 1
Query:  244 KGFLFLGGFGDTPALWKFLTPFIQDAGHLFVCPRTPGWGRSDFDEVMAVSWREWVLSGLEAVAVLKGLCDEVVIVGHSTGALVAAMVAEREPVSRLV 534
             G L + GF   PA    L   +  AG    CPR  G G S+ D +M  +  +W  S L+ +A+L+G C+++ +VGHS G L+   +A    V+ +V
Sbjct:   15 SGVLLIHGFTGLPAELLLLGEHLNRAGFTVHCPRLAGHGTSERD-LMRTTRDDWFNSVLDGLAILRGTCEKIFVVGHSMGGLLTIKLAAARNVAGIV 110          
BLAST of mRNA_P-wetherbeei_contig11531.3.1 vs. uniprot
Match: A0A399YV41_9CHLR (Hydrolase_4 domain-containing protein n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A399YV41_9CHLR)

HSP 1 Score: 58.9 bits (141), Expect = 4.330e-7
Identity = 38/113 (33.63%), Postives = 57/113 (50.44%), Query Frame = 1
Query:  196 LPFPPVLSLLASQ-PY-----------RKGFLFLGGFGDTPALWKFLTPFIQDAGHLFVCPRTPGWGRSDFDEVMAVSWREWVLSGLEAVAVLKGLCDEVVIVGHSTGALVAA 498
            +PF P  ++ A + PY           R G LFL GF  +P   + +  F+ + G    CP  PG G S  D++  VS R W+    EA  + +  CD++ I+GHS G ++AA
Sbjct:   32 MPFKPTYAVQAERLPYTFTPTIHLGERRIGVLFLHGFMGSPLSSRPMARFLNERGFFVHCPLLPGHG-SYPDKLYRVSHRAWLAEAEEAYQLARDACDDLFILGHSMGNVLAA 143          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11531.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KCH7_9PHAE1.330e-3541.34AB hydrolase-1 domain-containing protein n=2 Tax=E... [more]
A0A6V1PQ32_HETAK1.010e-2447.79Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
UPI0006D5434B1.340e-937.50alpha/beta fold hydrolase n=1 Tax=Numidum massilie... [more]
A8F880_PSELT4.830e-935.71Alpha/beta hydrolase fold domain-containing protei... [more]
A0A2M8FME1_9BACT3.610e-832.65AB hydrolase-1 domain-containing protein n=5 Tax=u... [more]
A0A8J7CZ08_9FIRM7.940e-829.90Alpha/beta fold hydrolase n=1 Tax=Quinella sp. 3Q1... [more]
A0A8J7CN40_9FIRM1.480e-732.99Alpha/beta fold hydrolase n=1 Tax=Quinella sp. 3Q1... [more]
A0A7T1M949_9SYNE2.260e-734.07Alpha/beta fold hydrolase n=1 Tax=Synechococcus sp... [more]
A0A8J6ZNG3_9FIRM2.790e-734.02Alpha/beta fold hydrolase n=1 Tax=Quinella sp. 1Q7... [more]
A0A399YV41_9CHLR4.330e-733.63Hydrolase_4 domain-containing protein n=1 Tax=Anae... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11531contigP-wetherbeei_contig11531:1422..2060 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog416591.Tlet_1810
PFAMsAbhydrolase_1,Abhydrolase_6,Hydrolase_4
Model size534
Max annot lvl200918|Thermotogae
KEGG koko:K03928
Hectar predicted targeting categorysignal peptide
Exons2
Evalue7.91e-10
EggNOG OGsCOG1647@1|root,COG1647@2|Bacteria,2GCT5@200918|Thermotogae
Ec32 ortholog descriptionAlpha/Beta hydrolase fold
Ec32 orthologEc-12_005570.1
EC3.1.1.1
DescriptionAlpha/beta hydrolase family
Cds size534
COG categoryS
BRITEko00000,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185915.7637594-CDS-P-wetherbeei_contig11531:1421..16011683185915.7637594-CDS-P-wetherbeei_contig11531:1421..1601Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11531 1422..1601 +
1683185915.7743754-CDS-P-wetherbeei_contig11531:1706..20601683185915.7743754-CDS-P-wetherbeei_contig11531:1706..2060Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11531 1707..2060 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11531.3.1prot_P-wetherbeei_contig11531.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig11531 1422..2060 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig11531.3.1

>prot_P-wetherbeei_contig11531.3.1 ID=prot_P-wetherbeei_contig11531.3.1|Name=mRNA_P-wetherbeei_contig11531.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=178bp
MLCIAVAIVCFLCMLLLLRKRRMQKLVESCFARLDSVGYRRDHALRYFPT
TLHAMAAEKKQYLIFLPFPPVLSLLASQPYRKGFLFLGGFGDTPALWKFL
TPFIQDAGHLFVCPRTPGWGRSDFDEVMAVSWREWVLSGLEAVAVLKGLC
DEVVIVGHSTGALVAAMVAEREPVSRLV
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mRNA from alignment at P-wetherbeei_contig11531:1422..2060+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig11531.3.1 ID=mRNA_P-wetherbeei_contig11531.3.1|Name=mRNA_P-wetherbeei_contig11531.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=639bp|location=Sequence derived from alignment at P-wetherbeei_contig11531:1422..2060+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCTATGCATCGCAGTAGCAATCGTGTGTTTCCTGTGTATGCTTCTGCT ATTACGAAAGCGAAGGATGCAAAAACTGGTCGAAAGCTGCTTCGCGCGAC TAGACTCTGTTGGATATAGGAGGGATCATGCTCTGCGATACTTCCCGACA ACGCTGCACGCCATGGCAGCGGAAAAGAAGGTCGGGAATATAACGCGTAC GACGTACTGCCATGCCACCGAAATCCCGGGCCACTTTTTCCGTTCCGAAA TGACTTTATCACAATTTGAAGGAAGCTACCTGCAGCAATACCTTATTTTC CTTCCCTTTCCGCCTGTCCTCTCACTTCTTGCCTCGCAGCCGTATCGCAA AGGCTTCCTTTTTTTAGGAGGTTTTGGAGACACTCCGGCTCTCTGGAAGT TTTTGACCCCCTTCATACAAGACGCCGGCCACCTCTTCGTGTGCCCACGC ACACCCGGGTGGGGCCGCTCTGACTTTGACGAAGTTATGGCGGTCTCTTG GCGTGAGTGGGTACTGAGCGGCCTGGAGGCCGTGGCAGTTTTGAAGGGGC TGTGCGACGAGGTAGTGATCGTGGGGCACAGCACGGGAGCGCTGGTGGCC GCAATGGTGGCGGAGCGGGAGCCCGTCTCGCGGCTGGTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig11531:1422..2060+

>mRNA_P-wetherbeei_contig11531.3.1 ID=mRNA_P-wetherbeei_contig11531.3.1|Name=mRNA_P-wetherbeei_contig11531.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=534bp|location=Sequence derived from alignment at P-wetherbeei_contig11531:1422..2060+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCTATGCATCGCAGTAGCAATCGTGTGTTTCCTGTGTATGCTTCTGCT
ATTACGAAAGCGAAGGATGCAAAAACTGGTCGAAAGCTGCTTCGCGCGAC
TAGACTCTGTTGGATATAGGAGGGATCATGCTCTGCGATACTTCCCGACA
ACGCTGCACGCCATGGCAGCGGAAAAGAAGCAATACCTTATTTTCCTTCC
CTTTCCGCCTGTCCTCTCACTTCTTGCCTCGCAGCCGTATCGCAAAGGCT
TCCTTTTTTTAGGAGGTTTTGGAGACACTCCGGCTCTCTGGAAGTTTTTG
ACCCCCTTCATACAAGACGCCGGCCACCTCTTCGTGTGCCCACGCACACC
CGGGTGGGGCCGCTCTGACTTTGACGAAGTTATGGCGGTCTCTTGGCGTG
AGTGGGTACTGAGCGGCCTGGAGGCCGTGGCAGTTTTGAAGGGGCTGTGC
GACGAGGTAGTGATCGTGGGGCACAGCACGGGAGCGCTGGTGGCCGCAAT
GGTGGCGGAGCGGGAGCCCGTCTCGCGGCTGGTG
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