mRNA_P-wetherbeei_contig1153.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1153.2.1 vs. uniprot
Match: A0A835ZCT7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCT7_9STRA) HSP 1 Score: 393 bits (1010), Expect = 1.790e-130 Identity = 192/290 (66.21%), Postives = 234/290 (80.69%), Query Frame = 3 Query: 291 LGDAGSCEGRKVALVTGGSRGIGKGISEALAEAGMDIVLGFNSDREAAEATATDLSTKYGTRCVCVGGDCSLPETRDKYFKAVDEEFGGQLNALVHNAGQYVGITSDNVDTL-EDRLLKFGDSSLLLTDGSVDLSTMRYYLKMYGEAWADLAERSLARMPDGDGHIVGISSPGCNAVVQPKPAYGMPGAGKSLMEYSMRLFAIAAGPRGINVNVVVPGVTFSDAWRRLSVKHGGPD-DFSIAEGFAAKMPMQRAASPREIGDVVRFLCSKGGAYITGVSLPVDGGLHLGR 1154 + D S GR++ALVTG +RGIGKGI+EALA D++LG+NSD AA+ATA +L++++G RCVCVGGD +LPETRDK+F+ VD+EFGG+++ LVHNAGQYVG+TS N L E R L+FGD SLL DG D +TMRYY+ MYGEAW DLAER L RM DG+ HIVGISSPGCNA+ +P Y MPG+GK LMEYSMRL+A+AA PRGINVNVV+PGVT SDAW+RLS GG + DF+IA G A +PM+RAAS RE+GDVV FLCS+ G+Y+TGVSLPVDGGLH+GR Sbjct: 1 MSDTSSSGGRRIALVTGAARGIGKGIAEALAS-DCDLILGYNSDVAAAQATADELASRFGARCVCVGGDITLPETRDKFFEVVDQEFGGKMHVLVHNAGQYVGVTSTNAHNLPESRGLRFGDGSLLGADGKTDFTTMRYYMAMYGEAWVDLAERCLKRMVDGESHIVGISSPGCNAISRPNDGYAMPGSGKCLMEYSMRLYALAAAPRGINVNVVIPGVTLSDAWKRLSAHIGGGEGDFAIATGLADTVPMRRAASTREMGDVVAFLCSRAGSYVTGVSLPVDGGLHMGR 289
BLAST of mRNA_P-wetherbeei_contig1153.2.1 vs. uniprot
Match: K0RHZ5_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RHZ5_THAOC) HSP 1 Score: 293 bits (751), Expect = 1.120e-91 Identity = 156/286 (54.55%), Postives = 200/286 (69.93%), Query Frame = 3 Query: 306 SCEGRKVALVTGGSRGIGKGISEALAEAGMDIVLGFNSDREAAEATATDLSTK-YGTRCVCVGGDCSLPETRDKYFKAVD--EEFGGQLNALVHNAGQYVGITSDNVDTLEDRLLKFGDSSLLLTDGSVDLSTMRYYLKMYGEAWADLAERSLARMPDGDGHIVGISSPGC-NAVVQPKPAYGMPGAGKSLMEYSMRLFAIAAGPRGINVNVVVPGVTFSDAWRRLSVKHGGPDDFSIAEGFAAKM-PMQRAASPREIGDVVRFLCSKGGAYITGVSLPVDGGLHL 1148 + GR A+VTGG+RGIG GI+ L+E G D++L +NSD+EAA+ + LS+K R CV GD SL ETRD+ F VD GG+L +VHNAGQYVGITS N +E R + FGD SLL DG DL MRYY +MYGEAW DL ERSL RM DG G IVGISSPG +++ P P+Y MPG+GKSLMEYS R++A+ A +GINVN++VPGVT +DAWRRL+ K G + + +G +M PM+R +PR+IG+ VRFL S G +TG++ P++GGLHL Sbjct: 25 AAAGRPFAIVTGGTRGIGSGIATVLSEEGYDLLLTYNSDKEAADEFVSSLSSKDEDLRAECVAGDISLCETRDEIFAVVDAMRSDGGRLEVVVHNAGQYVGITSSNSQGIEARQISFGDGSLLGEDGRADLEVMRYYQRMYGEAWVDLLERSLVRM-DGPGTIVGISSPGVTSSLYGPDPSYSMPGSGKSLMEYSARVYALKAAEKGINVNIIVPGVTLTDAWRRLAGKRGMEGE-DLVKGVVGRMVPMKRQTTPRDIGNAVRFLSSDTGRMVTGITFPLEGGLHL 308
BLAST of mRNA_P-wetherbeei_contig1153.2.1 vs. uniprot
Match: F0YEI5_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YEI5_AURAN) HSP 1 Score: 282 bits (721), Expect = 2.330e-87 Identity = 151/296 (51.01%), Postives = 190/296 (64.19%), Query Frame = 3 Query: 270 AATLAPSLGDAGSCEGRKVALVTGGSRGIGKGISEALAEAGMDIVLGFNSDREAAEATATDLSTKYGTRCVCVGGDCSLPETRDKYFKAVDEEFGGQ--LNALVHNAGQYVGITSDNVDTL-EDRLLKFGDSSLLLTDGSVDLSTMRYYLKMYGEAWADLAERSLARMPDGDGHIVGISSPGCNAVVQPKPAYGMPGAGKSLMEYSMRLFAIAAGPRGINVNVVVPGVTFSDAWRRLSVKHGGPDDFSIAEGFAAKMPMQRAASPREIGDVVRFLCSKGGAYITGVSLPVDGGLHL 1148 A+ L L A + VA+VTGG+RGIGKGI+EALA D++L +NSD +AA ATA +++ YG CVGGD S P TRD F DE F L A+VHNAGQYVG+TS N D + L FGD SLL DG+ DL M YY +MYG+A+ DL ER LARM +G G +VGISSPGC + Y MPG+GK +MEY+MRLFA+ A + +N NVV+PGVT SDAW +L+ G D + G A ++ + +PR +GD V FLCS G +TGVSLPVD G+HL Sbjct: 3 ASLLLLLLAPASFALNKHVAIVTGGTRGIGKGIAEALASQSFDLLLTYNSDADAAAATAAEITEAYGCAVECVGGDVSQPATRDAIFAKFDEAFKATHALGAVVHNAGQYVGVTSSNADGIGPSPQLGFGDGSLLGDDGAPDLGVMHYYQRMYGDAYVDLCERGLARMGEGGGSLVGISSPGCTLTYKANLGYDMPGSGKCVMEYAMRLFALRAAKKNVNCNVVIPGVTTSDAWGKLADARGADVDEMVG-GIAGRIAPMGSMAPRAVGDGVAFLCSPAGRAVTGVSLPVDNGVHL 297
BLAST of mRNA_P-wetherbeei_contig1153.2.1 vs. uniprot
Match: A0A7S0E8F9_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0E8F9_9EUKA) HSP 1 Score: 275 bits (704), Expect = 1.060e-84 Identity = 152/282 (53.90%), Postives = 187/282 (66.31%), Query Frame = 3 Query: 318 RKVALVTGGSRGIGKGISEALAEAGMDIVLGFNSDREAAEATATDLSTKYGTRCVCVGGDCSLPETRDKYFKAVDEEFGGQ--LNALVHNAGQYVGITSDNVDTL-EDRLLKFGDSSLLLTDGSVDLSTMRYYLKMYGEAWADLAERSLARM--PDGDGHIVGISSPGCNAVVQPKPAYGMPGAGKSLMEYSMRLFAIAAGPRGINVNVVVPGVTFSDAWRRLSVKHGGPDDFSIAEGFAAKMPMQRAASPREIGDVVRFLCSKGGAYITGVSLPVDGGLHL 1148 R+VA+VTGG+RGIG+GI+EALAEA D+++ +NSD EAAE A+ L +G CVGGD SL TRD+ F D F L A+VHNAGQYVGITS N D L + + FGD SLL DG+ +L+TM YY +MYG+A+ DL ER L RM G G ++GISSPGC Y MPGAGK +MEYSMRLFA+ + IN NVVVPGVT +DAW +L+ G D IA G A ++ A SP+++GD FLCS G ITGVSLPVDGG+HL Sbjct: 27 RRVAIVTGGTRGIGRGIAEALAEAQFDLLVTYNSDSEAAEEAASALRAAHGCTVECVGGDISLTATRDEIFARYDATFKDSHALGAVVHNAGQYVGITSTNADGLIGGKPVGFGDGSLL-EDGATNLATMHYYQRMYGDAYVDLCERGLDRMGAESGGGSLIGISSPGCTTQYNANMGYDMPGAGKCVMEYSMRLFALRCAGKNINCNVVVPGVTTTDAWGKLAATRGMDKDEMIA-GIAGRISPMGAMSPKQLGDACAFLCSPAGRIITGVSLPVDGGVHL 306
BLAST of mRNA_P-wetherbeei_contig1153.2.1 vs. uniprot
Match: A0A7S4QHI5_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QHI5_9STRA) HSP 1 Score: 273 bits (698), Expect = 1.180e-83 Identity = 150/296 (50.68%), Postives = 196/296 (66.22%), Query Frame = 3 Query: 315 GRKVALVTGGSRGIGKGISEALAEAGMDIVLGFNSDREAAEATATDLSTKYG------TRCVCVGGDCSLPETRDKYFKAVD---EEFGGQLNALVHNAGQYVGITSDNVDTLE-DRLLKFGDSSLLLTDGSVDLSTMRYYLKMYGEAWADLAERSLARMPD----GDGHIVGISSPG-CNAVVQPKPAYGMPGAGKSLMEYSMRLFAIAAGPRGINVNVVVPGVTFSDAWRRLSVKHGGPDDFSIAEGFAAK-MPMQRAASPREIGDVVRFLCSKGGAYITGVSLPVDGGLHLGR 1154 G+ +AL+TGG+RGIG GI+ LAE G D++L +NSD+EAA+A A L+ R C GGD SL TRD+ FK +D E +L LVHNAGQYVGITSDN D ++ + L FGD SL+ +G + TM YY +MYGEA+ DL ERSL RM G G IVGISSPG C P +Y MPG+GKSLMEYSMR++A RGINVNV++PGVT + AW+RL+ K G D+ + EG + +P+++ +P +IG+ V+FLCS+ G ++TG LP+DGGLHL R Sbjct: 24 GKPIALITGGTRGIGSGIARVLAEDGYDLLLTYNSDKEAADAFAKTLADDCAGNDGSDLRVECAGGDISLCSTRDEIFKVLDSMTENDDRRLAVLVHNAGQYVGITSDNSDGIQAGKTLSFGDGSLVDEEGRTNFDTMHYYQRMYGEAFVDLCERSLLRMGSIQNGGGGSIVGISSPGVCAHYYGPDWSYSMPGSGKSLMEYSMRIYAAKVAERGINVNVIIPGVTKTLAWKRLAKKRGLDDESQMMEGIVERSVPLKKMTTPADIGNTVKFLCSESGKFLTGTVLPIDGGLHLKR 319
BLAST of mRNA_P-wetherbeei_contig1153.2.1 vs. uniprot
Match: R1CFM0_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CFM0_EMIHU) HSP 1 Score: 271 bits (693), Expect = 1.990e-83 Identity = 142/278 (51.08%), Postives = 183/278 (65.83%), Query Frame = 3 Query: 318 RKVALVTGGSRGIGKGISEALAEAGMDIVLGFNSDREAAEATATDLSTKYGTRCVCVGGDCSLPETRDKYFKAVDEEFGGQLNALVHNAGQYVGITSDNVDTLEDRLLKFGDSSLLLTDG-SVDLSTMRYYLKMYGEAWADLAERSLARMPDGDGHIVGISSPGCNAVVQPKPAYGMPGAGKSLMEYSMRLFAIAAGPRGINVNVVVPGVTFSDAWRRLSVKHGGPDDFSIAEGFAAKMPMQRAASPREIGDVVRFLCSKGGAYITGVSLPVDGGLHL 1148 R VA+VTGG+RGIG+GISE+LA G D++ +N++ EAA A A +L T +G R CVGGD + G +L A+VHNAGQYVGITSDN D L +L FGD S+L DG S +L+TMRYY ++YG+A+ DL ER L RM G ++GISSPGC+ Y MPG+GK +MEY+MRLFA+ R +N NVV+PGVT +DAW RL+ G D + EG A ++ + +PR++GD V FLCS G ITGVSLPVDGG+HL Sbjct: 19 RHVAIVTGGTRGIGRGISESLARDGFDLLCTYNTNAEAAAAAAEELRTTHGVRVECVGGDIAQ---------------GCELGAVVHNAGQYVGITSDNADGLTAGMLGFGDGSMLSADGGSTNLATMRYYQRLYGDAYIDLMERGLRRMGTSGGSLIGISSPGCSTQYNANLGYDMPGSGKCVMEYAMRLFALRCAGRSVNCNVVIPGVTVTDAWGRLAATRGASKD-DLIEGIAGRLSPMGSMTPRQLGDAVAFLCSPRGRLITGVSLPVDGGVHL 280
BLAST of mRNA_P-wetherbeei_contig1153.2.1 vs. uniprot
Match: A0A1E7EZA8_9STRA (NAD(P)-binding protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EZA8_9STRA) HSP 1 Score: 271 bits (693), Expect = 6.240e-82 Identity = 147/284 (51.76%), Postives = 192/284 (67.61%), Query Frame = 3 Query: 318 RKVALVTGGSRGIGKGISEALAEAGMDIVLGFNSDREAAEATATDLSTKYGTR--CV-CVGGDCSLPETRDKYFKAVDEEFGGQ-LNALVHNAGQYVGITSDNVDTLE-DRLLKFGDSSLLLTDGSVDLSTMRYYLKMYGEAWADLAERSLARMPDGDGHIVGISSPGCNA-VVQPKPAYGMPGAGKSLMEYSMRLFAIAAGPRGINVNVVVPGVTFSDAWRRLSVKHGGPDDFSIAEGFAAKM-PMQRAASPREIGDVVRFLCSKGGAYITGVSLPVDGGLHL 1148 R +A+VTGG+RGIG GISEALA+AG D++L +N+D AA A L + CV CVGGD SL TRD F D FGG+ L +VHNAGQYVG+TSDNV L + L FGD SL +DG+ ++ +++YY +MYGEA+ DL ERSLARM G G +VGIS+PG A + P +Y MPG+GK LMEYSMR++A A R IN N++VPGV ++AW RL+ G D+ + +G ++ P +R+ PR+IGD V FLCS G +ITG +PVDGG+HL Sbjct: 108 RPIAIVTGGTRGIGSGISEALADAGYDLLLTYNTDNNAANGFADQLRARCADDDICVECVGGDISLTSTRDDIFSRFDSRFGGRPLAVMVHNAGQYVGVTSDNVAGLTAGKPLSFGDGSLANSDGTTNMDSLQYYHRMYGEAFVDLCERSLARM-SGTGSLVGISAPGVTASLYSPDSSYSMPGSGKCLMEYSMRIYAKIAAERRINANIIVPGVVRTEAWNRLAKTRGLSDETEMMKGIVDRIVPQKRSMDPRDIGDAVAFLCSDTGRFITGTVIPVDGGVHL 390
BLAST of mRNA_P-wetherbeei_contig1153.2.1 vs. uniprot
Match: A0A7S0J461_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J461_9EUKA) HSP 1 Score: 262 bits (669), Expect = 1.120e-79 Identity = 137/279 (49.10%), Postives = 180/279 (64.52%), Query Frame = 3 Query: 321 KVALVTGGSRGIGKGISEALAEAGMDIVLGFNSDREAAEATATDLSTKYGTRCVCVGGDCSLPETRDKYFKAVDEEFGGQ--LNALVHNAGQYVGITSDNVDTLEDRLLKFGDSSLLLTDGSVDLSTMRYYLKMYGEAWADLAERSLARMPDGDGHIVGISSPGCNAVVQPKPAYGMPGAGKSLMEYSMRLFAIAAGPRGINVNVVVPGVTFSDAWRRLSVKHGGPDDFSIAEGFAAKM-PMQRAASPREIGDVVRFLCSKGGAYITGVSLPVDGGLHL 1148 + A+VTGG+RG+G+GISEALA G D+++ +N++ +AAE AT+L + +G VGGD SL TRD F D+ F L A+ HNAGQYVG+TS N + L FGD S+L DG + L M+YY +MYG+A+ DL ER ARM + G ++GISSPGC P Y MPG+GK +MEY+MRLFA+ +GIN NVV+PG T SD W L+ K G + G A+++ P + S R++GD V FLCS G ITGVSLPVDGG+HL Sbjct: 16 RAAIVTGGTRGVGRGISEALAADGFDLLVTYNTNADAAEKAATELRSAFGCAVETVGGDISLEATRDDIFARYDQTFKASHALGAVAHNAGQYVGVTSANCEDLAASSYGFGDGSMLDADGRMQLDVMKYYQRMYGDAFVDLCERGAARMGEEGGSLIGISSPGCTLQYNPNLGYDMPGSGKCIMEYAMRLFAVRCASKGINCNVVIPGFTDSDGWAYLA-KGRGMTKEELLSGIASRLSPSGQPMSCRQLGDAVAFLCSPKGRLITGVSLPVDGGVHL 293
BLAST of mRNA_P-wetherbeei_contig1153.2.1 vs. uniprot
Match: A0A2D5MSC1_9BACT (KR domain-containing protein n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A2D5MSC1_9BACT) HSP 1 Score: 261 bits (667), Expect = 5.930e-79 Identity = 140/280 (50.00%), Postives = 183/280 (65.36%), Query Frame = 3 Query: 318 RKVALVTGGSRGIGKGISEALAEAGMDIVLGFNSDREAAEATATDLSTKYGTRCVCVGGDCSLPETRDKYFKAVDEEFGG--QLNALVHNAGQYVGITSDN-VDTLEDRLLKFGDSSLLLTDGSVDLSTMRYYLKMYGEAWADLAERSLARMPDGDGHIVGISSPGCNAVVQPKPAYGMPGAGKSLMEYSMRLFAIAAGPRGINVNVVVPGVTFSDAWRRLSVKHGGPDDFSIAEGFAAKMPMQRAASPREIGDVVRFLCSKGGAYITGVSLPVDGGLHL 1148 +++A+VTGG+RGIG+ ISE LA G D++L + +D ++++AT L KY VCV GD S +TRDK F D+ L+A+VHNAGQYVGITS N + ++++ FGD S+L DG+VDL+ M YY K+YG+A+ DL ER LARM G +VGISS GC +P P Y MPG GK MEY+MRLFA+ AG R +N NV++PGVT +DAW LS K GG D + + PM P +IG VV FLCS G ITG+S+PVD G+HL Sbjct: 49 KRLAIVTGGTRGIGRAISERLAADGFDLLLNYCADVKSSQATTQSLQDKYDCDVVCVSGDISQTKTRDKLFTEYDKHLKATHDLSAIVHNAGQYVGITSQNGLGLKHEKIMAFGDGSILTEDGNVDLTQMHYYQKLYGDAYIDLCERGLARMKYSGGSLVGISSGGCTLHYRPSPGYDMPGTGKCTMEYAMRLFALRAGMRNVNCNVIIPGVTSTDAWENLS-KIGG--DKKMKQKLEKLSPMG-GTCPLDIGKVVAFLCSSDGRPITGMSIPVDNGIHL 324
BLAST of mRNA_P-wetherbeei_contig1153.2.1 vs. uniprot
Match: A0A7S1AMT0_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1AMT0_NOCSC) HSP 1 Score: 259 bits (662), Expect = 9.500e-79 Identity = 144/284 (50.70%), Postives = 190/284 (66.90%), Query Frame = 3 Query: 318 RKVALVTGGSRGIGKGISEALAEAGMDIVLGFNSDREAAEATATDLSTKYGTRCVCVGGDCSLPETRDKYFKAVDEEFGGQ-LNALVHNAGQYVGITSDNVDTLED---RLLKFGDSSLLLTDGSVDLSTMRYYLKMYGEAWADLAERSLARMPDGDGHIVGISSPGCNAVVQPKPAYGMPGAGKSLMEYSMRLFAIAAGPRGINVNVVVPGVTFSDAWRRLSVKHGGPDDFSIAEGFAAK-MPMQRAASPREIGDVVRFLCSKGGAYITGVSLPVDGGLHLGR 1154 R VA+VTGG+RGIG+G SEALA+ G D++LG+ ++ EAAE A++L + G R V VGGD S T +YF+ +EF Q L A+VHNAGQY+G+T+ N + D RLL SLLL DGSVD S YY ++Y AW L ER++ + G G ++GISSPGCNA P Y MPG+ K++ME + R +A +GI VNVV+PGVT SDAW ++ G +D ++A+ A + +P+ RA S RE+GDVV FLCS G YITGV+LPVDGGLHLG+ Sbjct: 8 RPVAIVTGGTRGIGRGTSEALADEGFDLLLGYGTNAEAAETAASELRER-GARVVVVGGDVSEEATVVRYFEVFQKEFPSQQLRAVVHNAGQYMGLTAANNVGVSDGAPRLL----GSLLLPDGSVDFSRFDYYHQIYARAWVQLVERAVPFLTVGGGSVIGISSPGCNATQVPAGGYDMPGSAKTVMETTARFYAKNLAHQGITVNVVIPGVTLSDAWIHVAKGRGMAEDHTMAKEVAERAVPLGRAQSCRELGDVVAFLCSSRGKYITGVALPVDGGLHLGK 286 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1153.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1153.2.1 >prot_P-wetherbeei_contig1153.2.1 ID=prot_P-wetherbeei_contig1153.2.1|Name=mRNA_P-wetherbeei_contig1153.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=312bp MLLLMLLLAATLAPSLGDAGSCEGRKVALVTGGSRGIGKGISEALAEAGMback to top mRNA from alignment at P-wetherbeei_contig1153:5417..7396+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1153.2.1 ID=mRNA_P-wetherbeei_contig1153.2.1|Name=mRNA_P-wetherbeei_contig1153.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1980bp|location=Sequence derived from alignment at P-wetherbeei_contig1153:5417..7396+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1153:5417..7396+ >mRNA_P-wetherbeei_contig1153.2.1 ID=mRNA_P-wetherbeei_contig1153.2.1|Name=mRNA_P-wetherbeei_contig1153.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=936bp|location=Sequence derived from alignment at P-wetherbeei_contig1153:5417..7396+ (Phaeothamnion wetherbeei SAG_119_79)back to top |