mRNA_P-wetherbeei_contig11504.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig11504.3.1
Unique NamemRNA_P-wetherbeei_contig11504.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig11504.3.1 vs. uniprot
Match: A0A7K1B9Y0_9ACTN (Methionyl-tRNA formyltransferase n=2 Tax=root TaxID=1 RepID=A0A7K1B9Y0_9ACTN)

HSP 1 Score: 348 bits (893), Expect = 1.370e-117
Identity = 182/283 (64.31%), Postives = 211/283 (74.56%), Query Frame = 1
Query:    1 RLAYLGTPTMSVPPLRALVDHGFDIAAVVTRVDKRRGRGGAMMPSPVKEVAVELGLPVVHRVDDLLDPSIDPPIDLGVVVAFGQLIKPHVLTAVPMVNLHFSLLPRWRGAAPVERALLAGDEVTGVCLMELEEGLDTGPVYERVEVPIGTDETADELRAELVRAGTDLLIRRLTEGLGTAQPQVGDPSYASKLSADELRIDWTAPPVQVHRLVRLGGAWTTLRCKRLRIVAAELV-GDVPGA-ILHDGVVGGLRLRTVQPEGKGPMPFADFARGARLATDEQL 843
            RL YLGTP M+VPPLRALV  GFD+A VVTRVD RRGRG    PSPVK  A+ELG+PV H VDD+L    D    LGVVVAFG+LI+PH+L  +P VNLHFSLLPRWRGAAPVERALLAGD+ TGVCLM LE GLDTGPV+ RVEVPI  D T D LR  LV  GTDLL+ +L  G+G    Q G+ +YA+KL+ D+L +DW+ P V+ HR VRLGGAWTT R KRL++ AA+L+ GD  GA +  DG VGGLRL TVQPEGKGPM + D A GAR+   E L
Sbjct:   20 RLVYLGTPAMAVPPLRALVTAGFDVALVVTRVDTRRGRGTDTSPSPVKAAALELGIPVSHDVDDVLAADAD----LGVVVAFGRLIRPHLLAGLPFVNLHFSLLPRWRGAAPVERALLAGDDRTGVCLMRLEAGLDTGPVHARVEVPITADATGDSLRRLLVDVGTDLLVDQLRHGIGPGTVQDGEVTYAAKLTTDDLHLDWSRPAVERHRQVRLGGAWTTWRGKRLKVHAADLLDGDGVGAEVAADGAVGGLRLTTVQPEGKGPMSWRDLANGARITAPEIL 298          
BLAST of mRNA_P-wetherbeei_contig11504.3.1 vs. uniprot
Match: A0A7V8X1S3_9ACTN (Methionyl-tRNA formyltransferase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7V8X1S3_9ACTN)

HSP 1 Score: 342 bits (878), Expect = 9.950e-116
Identity = 179/275 (65.09%), Postives = 205/275 (74.55%), Query Frame = 1
Query:    1 RLAYLGTPTMSVPPLRALVDHGFDIAAVVTRVDKRRGRGGAMMPSPVKEVAVELGLPVVHRVDDLLDPSIDPPIDLGVVVAFGQLIKPHVLTAVPMVNLHFSLLPRWRGAAPVERALLAGDEVTGVCLMELEEGLDTGPVYERVEVPIGTDETADELRAELVRAGTDLLIRRLTEGLGTAQPQVGDPSYASKLSADELRIDWTAPPVQVHRLVRLGGAWTTLRCKRLRIVAAELVGDVPGAILHDGVVGGLRLRTVQPEGKGPMPFADFARGARL 825
            RLA+LGTP M+V PLRALVD G D+A VV+R D +RGRGG + PSPVK  A+ELGLPV   VDD+L  ++DPP +LGVVVAFG++IKPHVL A+PMVNLHFSLLPRWRGAAPVERALLAGDEVTGV LM +EEGLDTG VY   +V IG D TADELR+ELV AGT LL+  L EGLG   PQVG+P+YA+K+   ELRIDW  P  +VHRLVRLGGAWTT   KRL++    L  D P           L L  VQPEGKG MPF D+A GAR 
Sbjct:    2 RLAFLGTPAMAVAPLRALVDAGHDVALVVSRPDAKRGRGGTLTPSPVKVAALELGLPVTDVVDDVL--TLDPPAELGVVVAFGRIIKPHVLAALPMVNLHFSLLPRWRGAAPVERALLAGDEVTGVDLMAVEEGLDTGGVYREAQVAIGPDTTADELRSELVAAGTTLLVEALAEGLGEPVPQVGEPTYAAKIEPAELRIDWDRPAAEVHRLVRLGGAWTTHAGKRLKVWRTRLGPDGP-----------LELLEVQPEGKGRMPFRDWANGARF 263          
BLAST of mRNA_P-wetherbeei_contig11504.3.1 vs. uniprot
Match: A0A6J7AE99_9ZZZZ (Methionyl-tRNA formyltransferase n=3 Tax=root TaxID=1 RepID=A0A6J7AE99_9ZZZZ)

HSP 1 Score: 341 bits (874), Expect = 3.630e-115
Identity = 179/279 (64.16%), Postives = 205/279 (73.48%), Query Frame = 1
Query:    1 RLAYLGTPTMSVPPLRALVDHGFDIAAVVTRVDKRRGRGGAMMPSPVKEVAVELGLPVVHRVDDLLDPSIDPPIDLGVVVAFGQLIKPHVLTAVPMVNLHFSLLPRWRGAAPVERALLAGDEVTGVCLMELEEGLDTGPVYERVEVPIGTDETADELRAELVRAGTDLLIRRLTEGLGTAQPQVGDPSYASKLSADELRIDWTAPPVQVHRLVRLGGAWTTLRCKRLRIVAAELVGDVPGAILHDGVVGGLRLRTVQPEGKGPMPFADFARGARLATDE 837
            RLAY GTP M+VPPLRALVD G D+A VVTR DKRRGRGG + PSPVK  A+ELG+PV H VDD+L   I+    LGVVVAFGQ+IKPHVL  VPMVN+HFSLLPRWRGAAPVERALLAGD  TG CLM+LEEGLDTGPVY+ V  PIG  +TAD+LR  LV AGT+ L+R L   L T  PQ G+P YA+K++ DELRIDW+ P  Q+ RLVRLGGAWT  R KR+++ AA +          DGV   L   TVQPEGKGPMP +DF RGAR    E
Sbjct:    4 RLAYFGTPMMAVPPLRALVDAGHDVAFVVTRADKRRGRGGELSPSPVKAAALELGIPVSHSVDDVLGKDIE----LGVVVAFGQIIKPHVLAEVPMVNIHFSLLPRWRGAAPVERALLAGDTETGTCLMQLEEGLDTGPVYDTVRTPIGPTDTADDLRRVLVAAGTEQLVRCLAAPLPTPVPQSGEPLYAAKITPDELRIDWSQPAAQIDRLVRLGGAWTMFRGKRVKVHAATVT---------DGV---LTPVTVQPEGKGPMPASDFLRGARPEPGE 266          
BLAST of mRNA_P-wetherbeei_contig11504.3.1 vs. uniprot
Match: A0A7X9KM78_9ACTN (Methionyl-tRNA formyltransferase n=2 Tax=Actinobacteria TaxID=201174 RepID=A0A7X9KM78_9ACTN)

HSP 1 Score: 338 bits (868), Expect = 3.780e-114
Identity = 179/279 (64.16%), Postives = 208/279 (74.55%), Query Frame = 1
Query:    1 RLAYLGTPTMSVPPLRALVDHGFDIAAVVTRVDKRRGRGGAMMPSPVKEVAVELGLPVVHRVDDLLDPSIDPPIDLGVVVAFGQLIKPHVLTAVPMVNLHFSLLPRWRGAAPVERALLAGDEVTGVCLMELEEGLDTGPVYERVEVPIGTDETADELRAELVRAGTDLLIRRLTEGLGTAQPQVGDPSYASKLSADELRIDWTAPPVQVHRLVRLGGAWTTLRCKRLRIVAAELVGDVPGAILHDGVVGGLRLRTVQPEGKGPMPFADFARGARLATDE 837
            RLAY GTP M+VP L ALV  G ++A VVTRVDKRRGRGG + PSPVK+ A+ LGLPV H VDD+L   I+    LGVVVAFGQLIKPHVL  VPMVN HFSLLPRWRGAAPVERA+LAGD  TGVCLM+LEEGLDTG VY+ V VPIG   TADELR ELV AG + L+R L   L T  PQVG+P YA+K++ D+LRI W     Q+ R++RLGGAWTT R KR+++++A L      A +    V GL L++VQPEGKGPMPFADFARGAR A  E
Sbjct:    2 RLAYFGTPAMAVPSLTALVAAGHEVAIVVTRVDKRRGRGGELSPSPVKQAALALGLPVSHDVDDVLGKGIE----LGVVVAFGQLIKPHVLAEVPMVNSHFSLLPRWRGAAPVERAVLAGDAETGVCLMQLEEGLDTGGVYDTVRVPIGAAMTADELRRELVAAGCEQLVRCLAGPLPTPTPQVGEPLYAAKITPDDLRIRWAQGAQQIDRVIRLGGAWTTFREKRVKVLSATLDSS---ARVAPCPVAGLTLQSVQPEGKGPMPFADFARGARPAAAE 273          
BLAST of mRNA_P-wetherbeei_contig11504.3.1 vs. uniprot
Match: A0A4R7HZZ0_9ACTN (Methionyl-tRNA formyltransferase n=2 Tax=Ilumatobacter fluminis TaxID=467091 RepID=A0A4R7HZZ0_9ACTN)

HSP 1 Score: 329 bits (843), Expect = 1.800e-110
Identity = 171/279 (61.29%), Postives = 200/279 (71.68%), Query Frame = 1
Query:   10 YLGTPTMSVPPLRALVDHGFDIAAVVTRVDKRRGRGGAMMPSPVKEVAVELGLPVVHRVDDLLDPSIDPPIDLGVVVAFGQLIKPHVLTAVPMVNLHFSLLPRWRGAAPVERALLAGDEVTGVCLMELEEGLDTGPVYERVEVPIGTDETADELRAELVRAGTDLLIRRLTEGLGTAQPQVGDPSYASKLSADELRIDWTAPPVQVHRLVRLGGAWTTLRCKRLRIVAAELVGDVPGAILHDGVVGGLRLRTVQPEGKGPMPFADFARGARLATDEQLD 846
            YLGTP M+VPPL ALV+ G ++A VVT  D+RRGRGG + PSPVKE A  LG+PV H VDDLL    + P+DLGVVVA+G+LIKPHVL+ +  VNLHFSLLPRWRGAAPVERALL GD+VTGVCLM+LEEGLDTG VY+ VEVPIG D TADELR ELV  GT LL+ RL  GLG  +PQ G+ +YA+K+   ELRIDW+AP  Q HRL+RLGGAWTT R  R +I AA +V             G L   TVQPEGK  M +  +  GAR A  E  +
Sbjct:    2 YLGTPQMAVPPLEALVEAGHEVALVVTNPDRRRGRGGTLSPSPVKEAAERLGIPVAHAVDDLLAVHAEHPVDLGVVVAYGRLIKPHVLSELDFVNLHFSLLPRWRGAAPVERALLEGDDVTGVCLMQLEEGLDTGGVYDCVEVPIGADTTADELRHELVDVGTRLLVDRLASGLGEPEPQTGETTYAAKIDPAELRIDWSAPVEQTHRLIRLGGAWTTFRGARFKIHAANIVD------------GELVPVTVQPEGKPRMDYEAWRNGARPADGEWFE 268          
BLAST of mRNA_P-wetherbeei_contig11504.3.1 vs. uniprot
Match: UPI000E34577C (methionyl-tRNA formyltransferase n=1 Tax=Desertimonas flava TaxID=2064846 RepID=UPI000E34577C)

HSP 1 Score: 327 bits (839), Expect = 1.830e-109
Identity = 178/289 (61.59%), Postives = 210/289 (72.66%), Query Frame = 1
Query:    1 RLAYLGTPTMSVPPLRALVDHGFDIAAVVTRVDKRRGRGGAMMPSPVKEVAVELGLPVVHRVDDLLDPSIDPPIDLGVVVAFGQLIKPHVLTAVPMVNLHFSLLPRWRGAAPVERALLAGDEVTGVCLMELEEGLDTGPVYERVEVPIGTDETADELRAELVRAGTDLLIRRLT-EGLGTAQPQVGDPSYASKLSADELRIDWTAPPVQVHRLVRLGGAWTTLRCKRLRIVAAELVGD--VPGA-ILHDGVV----GGLRLRTVQPEGKGPMPFADFARGARLATDEQL 843
            R+ +LGTP M+VPPLRAL   G +IA VV++ D+RRGRGGA  PSPVK  A+ELGLPV  RVDD++D + D P+DLGVVVAFG+LIK HVL AVPMVN+HFSLLPRWRGAAPVERALLAGD  TGVC+M++EE LDTG VY    V IG D TA++LR ELV  GT LL+  L  + L    PQ+G+P+YA+K+   E RIDWT P   VHR VR G AWTT R KRLRI++AEL     V GA  L DGV+    G +R  TVQPEGKGPM +A FA GAR A  E+ 
Sbjct:    5 RIVFLGTPEMAVPPLRALHAAGHEIALVVSQPDRRRGRGGATSPSPVKAAALELGLPVTDRVDDIVDLAADAPVDLGVVVAFGRLIKAHVLDAVPMVNVHFSLLPRWRGAAPVERALLAGDTETGVCIMDVEETLDTGAVYASETVAIGADTTAEQLRTELVTVGTRLLVDVLAADPLPVPVPQLGEPTYAAKIDPGEWRIDWTQPAETVHRWVRAGHAWTTFRGKRLRILSAELTTSPSVGGAGTLQDGVIVAAGGAVRPVTVQPEGKGPMAWAAFANGARPAPGERF 293          
BLAST of mRNA_P-wetherbeei_contig11504.3.1 vs. uniprot
Match: A0A2E0RMX1_9ACTN (Methionyl-tRNA formyltransferase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E0RMX1_9ACTN)

HSP 1 Score: 325 bits (834), Expect = 4.060e-109
Identity = 170/282 (60.28%), Postives = 201/282 (71.28%), Query Frame = 1
Query:    1 RLAYLGTPTMSVPPLRALVDHGFDIAAVVTRVDKRRGRGGAMMPSPVKEVAVELGLPVVHRVDDLLDPSIDPPIDLGVVVAFGQLIKPHVLTAVPMVNLHFSLLPRWRGAAPVERALLAGDEVTGVCLMELEEGLDTGPVYERVEVPIGTDETADELRAELVRAGTDLLIRRLTEGLGTAQPQVGDPSYASKLSADELRIDWTAPPVQVHRLVRLGGAWTTLRCKRLRIVAAELVGDVPGAILHDGVVGGLRLRTVQPEGKGPMPFADFARGARLATDEQLD 846
            RL YLGTP M+VPPL ALV  G ++A VVT  D+RRGRGG + PSPVK     LG+PV H VDD+L    +    LGVVVAFG+LIKPHVL  +  VNLHFSLLPRWRGAAPVERALLAGDEVTGVCLM+LEEGLDTG VY+R EVPIG D TAD+LR ELV  GT LL+ RL  GLG A+PQVG+ +YA+K+   ELRIDW+AP  Q+HRL+RLGGAWTT R  R++I AA++V             G +    VQPEGK  + +A +  GAR A  E  +
Sbjct:    2 RLVYLGTPDMAVPPLDALVAAGHEVALVVTNPDRRRGRGGKLSPSPVKVATERLGIPVSHTVDDVLQAEAE----LGVVVAFGRLIKPHVLAELDFVNLHFSLLPRWRGAAPVERALLAGDEVTGVCLMQLEEGLDTGGVYDRAEVPIGPDTTADDLRRELVEVGTRLLVDRLAAGLGDAEPQVGEATYAAKIDPAELRIDWSAPAEQIHRLIRLGGAWTTFRGARVKIHAADVVD------------GRVEPTVVQPEGKPRLDYASWRNGARPADGEWFE 267          
BLAST of mRNA_P-wetherbeei_contig11504.3.1 vs. uniprot
Match: A0A2N5JYM6_9ACTN (Methionyl-tRNA formyltransferase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A2N5JYM6_9ACTN)

HSP 1 Score: 324 bits (831), Expect = 2.810e-108
Identity = 171/294 (58.16%), Postives = 207/294 (70.41%), Query Frame = 1
Query:    1 RLAYLGTPTMSVPPLRALVDHGFDIAAVVTRVDKRRGRGGAMMPSPVKEVAVELGLPVVHRVDDLLDPSIDPPIDLGVVVAFGQLIKPHVLTAVPMVNLHFSLLPRWRGAAPVERALLAGDEVTGVCLMELEEGLDTGPVYERVEVPIGTDETADELRAELVRAGTDLLIRRLTEGLGTAQPQVGDPSYASKLSADELRIDWTAPPVQVHRLVRLGGAWTTLRCKRLRIVAAEL---------VGDVPGAILHDGVVGG----LRLRTVQPEGKGPMPFADFARGARLATDEQL 843
            RLAYLG+P  +VPPL+AL+  G ++  VVT+ D+RRGRGGA++P+PVK  A+E G+PV  RVDD+LD  +D    LGVVVAFG+LIKPHVL  VPMVNLHFSLLPRWRGAAPVERA+LAGD  TGVCLM LEEGLDTGPVY R  V IG DETA+ELR  LVR GT +L+  L +GLG  +PQ G+ +YA K+ A+EL +DW  P V++HRLVR+G AWTT R +RL ++ A L            VPG I+   V  G    L L  VQPEGK PMP A +  G R    E+L
Sbjct:    2 RLAYLGSPAAAVPPLQALLAGGHEVKVVVTQPDRRRGRGGALVPTPVKAAALEAGIPVTERVDDVLDAGVD----LGVVVAFGRLIKPHVLDQVPMVNLHFSLLPRWRGAAPVERAILAGDTETGVCLMALEEGLDTGPVYRREAVAIGADETAEELRHRLVRVGTAMLVEVLGDGLGHPEPQQGEATYAVKIDAEELHLDWQRPAVELHRLVRVGRAWTTFRGRRLGVLRARLPDYSELSPAAARVPGVIVGPTVGAGDGRVLELVEVQPEGKPPMPAAAWHNGTRPRPGERL 291          
BLAST of mRNA_P-wetherbeei_contig11504.3.1 vs. uniprot
Match: A0A6N2DM40_9ACTN (Methionyl-tRNA formyltransferase n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A6N2DM40_9ACTN)

HSP 1 Score: 322 bits (824), Expect = 2.020e-107
Identity = 176/286 (61.54%), Postives = 207/286 (72.38%), Query Frame = 1
Query:    1 RLAYLGTPTMSVPPLRALVDHGFDIAAVVTRVDKRRGRGGAMMPSPVKEVAVELGLPVVHRVDDLLDPSIDPPIDLGVVVAFGQLIKPHVLTAVPMVNLHFSLLPRWRGAAPVERALLAGDEVTGVCLMELEEGLDTGPVYERVEVPIGTDETADELRAELVRAGTDLLIRRLTEGLGTAQPQVGDPSYASKLSADELRIDWTAPPVQVHRLVRLGGAWTTLRCKRLRIV--AAELVGDVPGAILHDGVVGGLRL--RTVQPEGKGPMPFADFARGARLATDEQLD 846
            RLAYLGTP MSVPPL AL   G +IAAVVTR D RRGRG    PSPVK  A  LG+ V+H VD+LL  S   PI+LGVVVAFGQ+I+P+VL  +PMVNLH SLLPRWRGAAP+ERA+LAGDEVTGVCLM +EEGLDTG VY RV+VPIG+  TADELR+ LV AGT LL+ RL EGLG  +PQ G P+YA+K+ ADELRIDWT P V++ RLVR+GGAWTT R +R++++  A E  GD       DG   G R     V+PEGK  M F  +  GAR A  E  +
Sbjct:    2 RLAYLGTPAMSVPPLEALAAAGHEIAAVVTRPDTRRGRGRETSPSPVKVAAERLGVKVLHDVDELLPISSAEPIELGVVVAFGQIIRPNVLEVIPMVNLHVSLLPRWRGAAPIERAILAGDEVTGVCLMAVEEGLDTGGVYARVDVPIGSA-TADELRSTLVDAGTHLLVDRLAEGLGEPEPQQGTPTYAAKIRADELRIDWTRPAVEIDRLVRVGGAWTTFRGRRVKVLSGAIEPSGD-------DGCDHGERYVPAEVRPEGKPAMAFDAWMNGARPAPGEWFE 279          
BLAST of mRNA_P-wetherbeei_contig11504.3.1 vs. uniprot
Match: A0A6J4I243_9ACTN (Methionyl-tRNA formyltransferase n=1 Tax=uncultured Acidimicrobiales bacterium TaxID=310071 RepID=A0A6J4I243_9ACTN)

HSP 1 Score: 321 bits (823), Expect = 6.670e-107
Identity = 170/290 (58.62%), Postives = 206/290 (71.03%), Query Frame = 1
Query:    1 RLAYLGTPTMSVPPLRALVDHGFDIAAVVTRVDKRRGRGGAMMPSPVKEVAVELGLPVVHRVDDLLDPSIDPPIDLGVVVAFGQLIKPHVLTAVPMVNLHFSLLPRWRGAAPVERALLAGDEVTGVCLMELEEGLDTGPVYERVEVPIGTDETADELRAELVRAGTDLLIRRLTEGLGTAQPQVGDPSYASKLSADELRIDWTAPPVQVHRLVRLGGAWTTLRCKRLRIVAAELVGD----VPGAILHDGVV-----GGLRLRTVQPEGKGPMPFADFARGARLATDEQL 843
            RLAYLGTP   VPPLRALV+ GFD+A VV++ D+RRGRGGA  PSPVK  A+ELGLPV  R  D++D   D    LGVVVA+G+LIKP +L A+P VNLHFSLLPRWRGAAPVERALLAGD  TGVCLM+LEEGLDTGPV+ R  VPIG ++TADELR +LV  GT LL+ +LT GLG   PQ G+ ++A+K+   EL + W     ++HRLVRLG AWTT R +RL+++ A LV D    VPG+   DG+      G LRL  VQPEGK P P   +  GAR    ++L
Sbjct:   17 RLAYLGTPAAGVPPLRALVEAGFDVALVVSQPDRRRGRGGATTPSPVKAAALELGLPVTDRTADVVDAGAD----LGVVVAYGRLIKPALLAALPFVNLHFSLLPRWRGAAPVERALLAGDTETGVCLMQLEEGLDTGPVFAREVVPIGAEQTADELRDQLVTVGTSLLVAQLTGGLGVPVPQEGEVTHAAKVDPAELELRWDRGADELHRLVRLGRAWTTFRRRRLKVLRAALVPDAPPGVPGSFGDDGLTVAAGSGALRLLEVQPEGKAPQPAGAWRNGARPGPADRL 302          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11504.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7K1B9Y0_9ACTN1.370e-11764.31Methionyl-tRNA formyltransferase n=2 Tax=root TaxI... [more]
A0A7V8X1S3_9ACTN9.950e-11665.09Methionyl-tRNA formyltransferase n=1 Tax=Acidimicr... [more]
A0A6J7AE99_9ZZZZ3.630e-11564.16Methionyl-tRNA formyltransferase n=3 Tax=root TaxI... [more]
A0A7X9KM78_9ACTN3.780e-11464.16Methionyl-tRNA formyltransferase n=2 Tax=Actinobac... [more]
A0A4R7HZZ0_9ACTN1.800e-11061.29Methionyl-tRNA formyltransferase n=2 Tax=Ilumatoba... [more]
UPI000E34577C1.830e-10961.59methionyl-tRNA formyltransferase n=1 Tax=Desertimo... [more]
A0A2E0RMX1_9ACTN4.060e-10960.28Methionyl-tRNA formyltransferase n=1 Tax=Acidimicr... [more]
A0A2N5JYM6_9ACTN2.810e-10858.16Methionyl-tRNA formyltransferase n=1 Tax=Actinomyc... [more]
A0A6N2DM40_9ACTN2.020e-10761.54Methionyl-tRNA formyltransferase n=1 Tax=Ilumatoba... [more]
A0A6J4I243_9ACTN6.670e-10758.62Methionyl-tRNA formyltransferase n=1 Tax=unculture... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11504contigP-wetherbeei_contig11504:1183..2031 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1313172.YM304_20570
Preferred namefmt
PFAMsFormyl_trans_C,Formyl_trans_N
Model size849
Max annot lvl84992|Acidimicrobiia
KEGG rclassRC00026,RC00165
KEGG koko:K00604
KEGG ReactionR03940
KEGG Pathwayko00670,ko00970,map00670,map00970
Hectar predicted targeting categoryother localisation
Exons1
Evalue9.92e-100
EggNOG OGsCOG0223@1|root,COG0223@2|Bacteria,2GKH5@201174|Actinobacteria,4CN6M@84992|Acidimicrobiia
EC2.1.2.9
DescriptionFormyl transferase, C-terminal domain
Cds size822
COG categoryJ
BRITEko00000,ko00001,ko01000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185914.545999-UTR-P-wetherbeei_contig11504:1182..12091683185914.545999-UTR-P-wetherbeei_contig11504:1182..1209Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig11504 1183..1209 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185914.5547905-CDS-P-wetherbeei_contig11504:1209..20311683185914.5547905-CDS-P-wetherbeei_contig11504:1209..2031Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11504 1210..2031 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11504.3.1prot_P-wetherbeei_contig11504.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig11504 1210..2031 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig11504.3.1

>prot_P-wetherbeei_contig11504.3.1 ID=prot_P-wetherbeei_contig11504.3.1|Name=mRNA_P-wetherbeei_contig11504.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=274bp
MSVPPLRALVDHGFDIAAVVTRVDKRRGRGGAMMPSPVKEVAVELGLPVV
HRVDDLLDPSIDPPIDLGVVVAFGQLIKPHVLTAVPMVNLHFSLLPRWRG
AAPVERALLAGDEVTGVCLMELEEGLDTGPVYERVEVPIGTDETADELRA
ELVRAGTDLLIRRLTEGLGTAQPQVGDPSYASKLSADELRIDWTAPPVQV
HRLVRLGGAWTTLRCKRLRIVAAELVGDVPGAILHDGVVGGLRLRTVQPE
GKGPMPFADFARGARLATDEQLD*
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mRNA from alignment at P-wetherbeei_contig11504:1183..2031+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig11504.3.1 ID=mRNA_P-wetherbeei_contig11504.3.1|Name=mRNA_P-wetherbeei_contig11504.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=849bp|location=Sequence derived from alignment at P-wetherbeei_contig11504:1183..2031+ (Phaeothamnion wetherbeei SAG_119_79)
CGGCTCGCCTACCTCGGCACGCCGACGATGTCGGTGCCGCCGTTGCGAGC CCTCGTCGACCACGGGTTCGACATCGCCGCCGTCGTCACTCGCGTCGACA AACGACGCGGCCGTGGTGGCGCGATGATGCCCAGCCCCGTGAAGGAAGTC GCCGTCGAGCTCGGTCTGCCCGTCGTGCACCGCGTCGACGATCTGCTCGA CCCGTCGATCGATCCGCCGATCGACCTCGGTGTGGTCGTCGCCTTCGGCC AGCTGATCAAGCCGCACGTGCTGACGGCGGTGCCGATGGTCAACCTCCAC TTCTCGCTGCTGCCGCGGTGGCGCGGCGCAGCCCCCGTCGAGCGCGCACT CCTGGCCGGCGACGAGGTCACCGGCGTCTGCCTGATGGAGCTCGAGGAAG GGCTGGACACCGGTCCGGTCTACGAGCGCGTCGAGGTGCCGATCGGCACC GACGAGACCGCTGACGAGCTGCGCGCCGAACTGGTACGTGCCGGCACCGA CCTGCTGATCCGACGGCTCACCGAGGGCCTCGGTACGGCGCAGCCGCAAG TGGGCGACCCCTCGTACGCGTCGAAGCTCTCCGCCGACGAGCTGCGCATC GACTGGACCGCGCCGCCCGTGCAGGTGCATCGGTTGGTGCGCCTCGGCGG AGCATGGACCACGTTGCGCTGCAAGCGGCTGCGCATCGTCGCTGCTGAGC TCGTCGGCGACGTTCCCGGCGCAATCCTGCACGACGGTGTCGTCGGCGGT CTGCGCCTGCGCACCGTGCAACCTGAAGGGAAGGGCCCGATGCCCTTCGC CGACTTCGCCCGCGGCGCCCGCCTGGCGACCGACGAGCAACTGGACTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig11504:1183..2031+

>mRNA_P-wetherbeei_contig11504.3.1 ID=mRNA_P-wetherbeei_contig11504.3.1|Name=mRNA_P-wetherbeei_contig11504.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=822bp|location=Sequence derived from alignment at P-wetherbeei_contig11504:1183..2031+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTCGGTGCCGCCGTTGCGAGCCCTCGTCGACCACGGGTTCGACATCGC
CGCCGTCGTCACTCGCGTCGACAAACGACGCGGCCGTGGTGGCGCGATGA
TGCCCAGCCCCGTGAAGGAAGTCGCCGTCGAGCTCGGTCTGCCCGTCGTG
CACCGCGTCGACGATCTGCTCGACCCGTCGATCGATCCGCCGATCGACCT
CGGTGTGGTCGTCGCCTTCGGCCAGCTGATCAAGCCGCACGTGCTGACGG
CGGTGCCGATGGTCAACCTCCACTTCTCGCTGCTGCCGCGGTGGCGCGGC
GCAGCCCCCGTCGAGCGCGCACTCCTGGCCGGCGACGAGGTCACCGGCGT
CTGCCTGATGGAGCTCGAGGAAGGGCTGGACACCGGTCCGGTCTACGAGC
GCGTCGAGGTGCCGATCGGCACCGACGAGACCGCTGACGAGCTGCGCGCC
GAACTGGTACGTGCCGGCACCGACCTGCTGATCCGACGGCTCACCGAGGG
CCTCGGTACGGCGCAGCCGCAAGTGGGCGACCCCTCGTACGCGTCGAAGC
TCTCCGCCGACGAGCTGCGCATCGACTGGACCGCGCCGCCCGTGCAGGTG
CATCGGTTGGTGCGCCTCGGCGGAGCATGGACCACGTTGCGCTGCAAGCG
GCTGCGCATCGTCGCTGCTGAGCTCGTCGGCGACGTTCCCGGCGCAATCC
TGCACGACGGTGTCGTCGGCGGTCTGCGCCTGCGCACCGTGCAACCTGAA
GGGAAGGGCCCGATGCCCTTCGCCGACTTCGCCCGCGGCGCCCGCCTGGC
GACCGACGAGCAACTGGACTGA
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