mRNA_P-wetherbeei_contig115.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig115.2.1
Unique NamemRNA_P-wetherbeei_contig115.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig115.2.1 vs. uniprot
Match: UPI00077A55EB (phosphoribosylformylglycinamidine synthase-like n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A55EB)

HSP 1 Score: 118 bits (295), Expect = 9.260e-28
Identity = 55/123 (44.72%), Postives = 68/123 (55.28%), Query Frame = 1 
Query:   40 RLAPIVYVDDDGMATERYPMNPSGSPGGVAALCSEDGRHLALMPHPERCFLSWQMPWQDPEYVEQRLREAEKGARRRXXXXXXXXXXXXXXXXXTEKEQDDEGLEASPWMQLFHNAYKFCTET 408
            +L P+ YVDD+G+ T RYP+NP+GSP G+A LCS DGRHLA+MPHPERC L WQ PW   ++                                         LEASPW+Q+FHNAYK+C ET
Sbjct:  886 KLIPLCYVDDEGIPTTRYPLNPNGSPEGIAGLCSTDGRHLAMMPHPERCTLLWQWPWMPLDWRN--------------------------------------SLEASPWLQMFHNAYKWCVET 970
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BLAST of mRNA_P-wetherbeei_contig115.2.1 vs. uniprot
Match: UPI001CF3B93A (phosphoribosylformylglycinamidine synthase-like n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF3B93A)

HSP 1 Score: 118 bits (295), Expect = 9.560e-28
Identity = 55/123 (44.72%), Postives = 68/123 (55.28%), Query Frame = 1 
Query:   40 RLAPIVYVDDDGMATERYPMNPSGSPGGVAALCSEDGRHLALMPHPERCFLSWQMPWQDPEYVEQRLREAEKGARRRXXXXXXXXXXXXXXXXXTEKEQDDEGLEASPWMQLFHNAYKFCTET 408
            +L P+ YVDDDG+ T +YP+NP+GSP G+A LCS DGRHLA+MPHPERC L WQ PW   ++                                         LEASPW+Q+FHNAYK+C ET
Sbjct: 1272 KLIPLCYVDDDGIPTTQYPLNPNGSPEGIAGLCSTDGRHLAMMPHPERCTLLWQWPWMPLDWRN--------------------------------------SLEASPWLQMFHNAYKWCVET 1356
[Close]
BLAST of mRNA_P-wetherbeei_contig115.2.1 vs. uniprot
Match: A0A444IVH6_9DELT (CobB/CobQ-like glutamine amidotransferase domain-containing protein n=1 Tax=Candidatus Electrothrix communis TaxID=1859133 RepID=A0A444IVH6_9DELT)

HSP 1 Score: 108 bits (269), Expect = 2.470e-27
Identity = 52/121 (42.98%), Postives = 61/121 (50.41%), Query Frame = 1 
Query:   43 LAPIVYVDDDGMATERYPMNPSGSPGGVAALCSEDGRHLALMPHPERCFLSWQMPWQDPEYVEQRLREAEKGARRRXXXXXXXXXXXXXXXXXTEKEQDDEGLEASPWMQLFHNAYKFCTE 405
            L P+VY DD GMATE+YP NP+GSP G A LCS DGRHLA+MPHPER FL WQ  W   E                                         G+E SPW+Q+F NAY +C +
Sbjct:   44 LVPLVYTDDSGMATEQYPFNPNGSPDGFAGLCSPDGRHLAMMPHPERAFLGWQCHWLPREM---------------------------------------RGMEVSPWLQMFRNAYNWCVK 125
[Close]
BLAST of mRNA_P-wetherbeei_contig115.2.1 vs. uniprot
Match: A0A2B4T0H2_STYPI (Phosphoribosylformylglycinamidine synthase n=4 Tax=Pocilloporidae TaxID=46729 RepID=A0A2B4T0H2_STYPI)

HSP 1 Score: 112 bits (281), Expect = 7.290e-26
Identity = 52/123 (42.28%), Postives = 67/123 (54.47%), Query Frame = 1 
Query:   40 RLAPIVYVDDDGMATERYPMNPSGSPGGVAALCSEDGRHLALMPHPERCFLSWQMPWQDPEYVEQRLREAEKGARRRXXXXXXXXXXXXXXXXXTEKEQDDEGLEASPWMQLFHNAYKFCTET 408
            +L P+ +VDDDG+ T +YP+NP+GSP G+A LCS DGRHLA+MPHPERC L WQ PW   ++                                       + L+ASPW Q+F NAYK+C ET
Sbjct: 1282 KLVPLYFVDDDGVPTTQYPLNPNGSPQGMAGLCSPDGRHLAMMPHPERCTLLWQWPWMPRDW--------------------------------------QDSLKASPWFQMFQNAYKWCVET 1366
[Close]
BLAST of mRNA_P-wetherbeei_contig115.2.1 vs. uniprot
Match: A0A7Y3AD57_9DELT (Phosphoribosylformylglycinamidine synthase n=1 Tax=Desulfobacterales bacterium TaxID=2044940 RepID=A0A7Y3AD57_9DELT)

HSP 1 Score: 104 bits (260), Expect = 1.990e-25
Identity = 54/119 (45.38%), Postives = 64/119 (53.78%), Query Frame = 1 
Query:   43 LAPIVYVDDDGMATERYPMNPSGSPGGVAALCSEDGRHLALMPHPERCFLSWQMPWQDPEYVEQRLREAEKGARRRXXXXXXXXXXXXXXXXXTEKEQDDEGLEASPWMQLFHNAYKFC 399
            L P+VYVDD G  TE YP NP+GSP G+A LCS DGRHLALMPHPER FL+WQ  W  PE ++Q                                      L ASPW+Q+F NAY++C
Sbjct:   90 LTPLVYVDDAGNPTESYPFNPNGSPAGLAGLCSPDGRHLALMPHPERTFLTWQAHWL-PENMKQ--------------------------------------LPASPWIQMFQNAYEWC 169
[Close]
BLAST of mRNA_P-wetherbeei_contig115.2.1 vs. uniprot
Match: A0A7S0NDM5_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0NDM5_9CRYP)

HSP 1 Score: 102 bits (254), Expect = 2.360e-25
Identity = 40/51 (78.43%), Postives = 47/51 (92.16%), Query Frame = 1 
Query:   58 YVDDDGMATERYPMNPSGSPGGVAALCSEDGRHLALMPHPERCFLSWQMPW 210
            +VDDDGMATERYP NP+GSPGG+A LC++DGRHLA+MPHPERC L WQ+PW
Sbjct:   26 FVDDDGMATERYPFNPNGSPGGIAGLCTKDGRHLAMMPHPERCVLKWQIPW 76
[Close]
BLAST of mRNA_P-wetherbeei_contig115.2.1 vs. uniprot
Match: A0A7S2NQB8_9EUKA (Hypothetical protein n=1 Tax=Cyanoptyche gloeocystis TaxID=77922 RepID=A0A7S2NQB8_9EUKA)

HSP 1 Score: 103 bits (256), Expect = 3.260e-25
Identity = 47/76 (61.84%), Postives = 55/76 (72.37%), Query Frame = 1 
Query:    1 PSSPTSDHLSVPPRLAPIVYVDDDGMATERYPMNPSGSPGGVAALCSEDGRHLALMPHPERCFLSWQMPWQDPEYV 228
            P  P+     +  RLAPI YVDDDG  TERYP NP+GSP G+AALCS DGRHLALMPHPER FL WQ P++  ++ 
Sbjct:   34 PDEPSVPQDMLNSRLAPIRYVDDDGKVTERYPFNPNGSPLGIAALCSPDGRHLALMPHPERAFLRWQWPFKPQDWA 109
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BLAST of mRNA_P-wetherbeei_contig115.2.1 vs. uniprot
Match: UPI00065BF23F (phosphoribosylformylglycinamidine synthase n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI00065BF23F)

HSP 1 Score: 110 bits (276), Expect = 3.410e-25
Identity = 54/122 (44.26%), Postives = 67/122 (54.92%), Query Frame = 1 
Query:   43 LAPIVYVDDDGMATERYPMNPSGSPGGVAALCSEDGRHLALMPHPERCFLSWQMPWQDPEYVEQRLREAEKGARRRXXXXXXXXXXXXXXXXXTEKEQDDEGLEASPWMQLFHNAYKFCTET 408
            LAP+ YV+D G  TE YP NP+GSP G+AALCS DGRHLA+MPHPERC  +WQ PW  P Y E+                                      L+ SPWM++F NAYK+CT++
Sbjct: 1242 LAPVQYVNDAGDPTECYPANPNGSPDGLAALCSPDGRHLAVMPHPERCVWAWQCPWMPPAYREK--------------------------------------LKFSPWMRMFQNAYKWCTQS 1325
[Close]
BLAST of mRNA_P-wetherbeei_contig115.2.1 vs. uniprot
Match: A0A0D2MLC2_9CHLO (Phosphoribosylformylglycinamidinesynthase n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2MLC2_9CHLO)

HSP 1 Score: 102 bits (254), Expect = 4.280e-25
Identity = 44/60 (73.33%), Postives = 50/60 (83.33%), Query Frame = 1 
Query:   43 LAPIVYVDDDGMATERYPMNPSGSPGGVAALCSEDGRHLALMPHPERCFLSWQMPWQDPE 222
            LAPI YVD  G ATERYP NP+GSP G+AALCS +GRHLA+MPHPERCFL+WQ+P   PE
Sbjct:   33 LAPIRYVDTSGSATERYPFNPNGSPHGIAALCSANGRHLAMMPHPERCFLAWQLPHSPPE 92
[Close]
BLAST of mRNA_P-wetherbeei_contig115.2.1 vs. uniprot
Match: A0A444J4N1_9DELT (Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain n=1 Tax=Candidatus Electrothrix aarhusiensis TaxID=1859131 RepID=A0A444J4N1_9DELT)

HSP 1 Score: 108 bits (271), Expect = 5.850e-25
Identity = 52/121 (42.98%), Postives = 62/121 (51.24%), Query Frame = 1 
Query:   43 LAPIVYVDDDGMATERYPMNPSGSPGGVAALCSEDGRHLALMPHPERCFLSWQMPWQDPEYVEQRLREAEKGARRRXXXXXXXXXXXXXXXXXTEKEQDDEGLEASPWMQLFHNAYKFCTE 405
            L P+VY DD G  TE+YP NP+GSPGG A LCS DGRHLA+MPHPER FL WQ  W                                         QD +GLE SPW+++F NAY +C +
Sbjct:  361 LVPLVYTDDSGAVTEQYPFNPNGSPGGFAGLCSPDGRHLAMMPHPERAFLPWQCHW---------------------------------------LPQDMQGLEVSPWLKMFRNAYDWCVK 442
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig115.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00077A55EB9.260e-2844.72phosphoribosylformylglycinamidine synthase-like n=... [more]
UPI001CF3B93A9.560e-2844.72phosphoribosylformylglycinamidine synthase-like n=... [more]
A0A444IVH6_9DELT2.470e-2742.98CobB/CobQ-like glutamine amidotransferase domain-c... [more]
A0A2B4T0H2_STYPI7.290e-2642.28Phosphoribosylformylglycinamidine synthase n=4 Tax... [more]
A0A7Y3AD57_9DELT1.990e-2545.38Phosphoribosylformylglycinamidine synthase n=1 Tax... [more]
A0A7S0NDM5_9CRYP2.360e-2578.43Hypothetical protein (Fragment) n=1 Tax=Hanusia ph... [more]
A0A7S2NQB8_9EUKA3.260e-2561.84Hypothetical protein n=1 Tax=Cyanoptyche gloeocyst... [more]
UPI00065BF23F3.410e-2544.26phosphoribosylformylglycinamidine synthase n=1 Tax... [more]
A0A0D2MLC2_9CHLO4.280e-2573.33Phosphoribosylformylglycinamidinesynthase n=1 Tax=... [more]
A0A444J4N1_9DELT5.850e-2542.98Phosphoribosylformylglycinamidine (FGAM) synthase,... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig115contigP-wetherbeei_contig115:4186..4671 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog6500.XP_005097983.1
Preferred namePFAS
PFAMsAIRS,AIRS_C,GATase_5
Model size486
Max annot lvl33208|Metazoa
KEGG rclassRC00010,RC01160
KEGG koko:K01952
KEGG ReactionR04463
KEGG Pathwayko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130
KEGG ModuleM00048
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004642,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006520,GO:0006541,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009064,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0032502,GO:0034641,GO:0034654,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0048856,GO:0055086,GO:0060322,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097065,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605
Exons1
Evalue9.93e-22
EggNOG OGsCOG0046@1|root,KOG1907@2759|Eukaryota,38F1H@33154|Opisthokonta,3B9CY@33208|Metazoa,3D074@33213|Bilateria
EC6.3.5.3
Descriptionphosphoribosylformylglycinamidine synthase activity
Cds size375
COG categoryF
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185914.1782336-UTR-P-wetherbeei_contig115:4185..42211683185914.1782336-UTR-P-wetherbeei_contig115:4185..4221Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig115 4186..4221 -
1683185914.1941142-UTR-P-wetherbeei_contig115:4596..46711683185914.1941142-UTR-P-wetherbeei_contig115:4596..4671Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig115 4597..4671 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185914.1868203-CDS-P-wetherbeei_contig115:4221..45961683185914.1868203-CDS-P-wetherbeei_contig115:4221..4596Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig115 4222..4596 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig115.2.1prot_P-wetherbeei_contig115.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig115 4222..4596 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig115.2.1

>prot_P-wetherbeei_contig115.2.1 ID=prot_P-wetherbeei_contig115.2.1|Name=mRNA_P-wetherbeei_contig115.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=125bp
MATERYPMNPSGSPGGVAALCSEDGRHLALMPHPERCFLSWQMPWQDPEY
VEQRLREAEKGARRRRGRQRQIHGGGGGSGEATEKEQDDEGLEASPWMQL
FHNAYKFCTETDGARPAGGADAGG*
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mRNA from alignment at P-wetherbeei_contig115:4186..4671-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig115.2.1 ID=mRNA_P-wetherbeei_contig115.2.1|Name=mRNA_P-wetherbeei_contig115.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=486bp|location=Sequence derived from alignment at P-wetherbeei_contig115:4186..4671- (Phaeothamnion wetherbeei SAG_119_79)
CCGTCGTCGCCGACAAGCGACCACTTATCGGTGCCGCCGCGGCTGGCGCC
CATCGTGTACGTGGACGACGACGGCATGGCGACAGAACGGTACCCAATGA
ACCCGAGCGGCTCGCCGGGCGGCGTGGCGGCGCTCTGCTCGGAGGACGGG
CGGCACCTGGCGCTGATGCCGCACCCGGAGCGCTGCTTCCTGTCGTGGCA
GATGCCGTGGCAGGACCCCGAGTACGTCGAACAGCGGCTGCGGGAAGCGG
AAAAGGGGGCGCGACGGCGACGCGGGCGGCAAAGACAAATCCACGGCGGC
GGCGGCGGCAGCGGCGAGGCGACAGAGAAGGAGCAAGATGATGAAGGCTT
GGAGGCATCGCCGTGGATGCAGCTCTTTCACAACGCCTACAAATTTTGCA
CCGAGACGGACGGGGCGCGTCCTGCTGGCGGCGCTGACGCTGGCGGATAG
TCCACAAACTGAGACCTTAAGTTAAAATCAAACCAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig115:4186..4671-

>mRNA_P-wetherbeei_contig115.2.1 ID=mRNA_P-wetherbeei_contig115.2.1|Name=mRNA_P-wetherbeei_contig115.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=375bp|location=Sequence derived from alignment at P-wetherbeei_contig115:4186..4671- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGACAGAACGGTACCCAATGAACCCGAGCGGCTCGCCGGGCGGCGT
GGCGGCGCTCTGCTCGGAGGACGGGCGGCACCTGGCGCTGATGCCGCACC
CGGAGCGCTGCTTCCTGTCGTGGCAGATGCCGTGGCAGGACCCCGAGTAC
GTCGAACAGCGGCTGCGGGAAGCGGAAAAGGGGGCGCGACGGCGACGCGG
GCGGCAAAGACAAATCCACGGCGGCGGCGGCGGCAGCGGCGAGGCGACAG
AGAAGGAGCAAGATGATGAAGGCTTGGAGGCATCGCCGTGGATGCAGCTC
TTTCACAACGCCTACAAATTTTGCACCGAGACGGACGGGGCGCGTCCTGC
TGGCGGCGCTGACGCTGGCGGATAG
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