mRNA_P-wetherbeei_contig11456.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig11456.1.1
Unique NamemRNA_P-wetherbeei_contig11456.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig11456.1.1 vs. uniprot
Match: A0A3C0TV56_9PROT (Transporter n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TV56_9PROT)

HSP 1 Score: 496 bits (1276), Expect = 1.260e-174
Identity = 245/278 (88.13%), Postives = 266/278 (95.68%), Query Frame = 1
Query:    1 MNRDVYVIGVGMHRFSKDHIPKRDLYFTAGMEALKDAGIKFRDVGALYNGYIGGGMTEGIGFAKDLGLTGVPVTHVENASATGSSAFREAVWAVSGGQTDVAMAIGYDDMRLIGNPIAKPPSGKKKLPSMENIMLPAGFFAMWAQRRMHENGTTIETFAKIAAKNWNHGRHNPMAQRRADHVVTAEEVMAADMVAYPHTAMMACASGAGAAGAIVATEAWAKKHANGRPMIKVLSSQSQSEHYGEGHIFMGAVVGPSYSTEITGRLAYEEAGLGPKDI 834
            MNRDVYVIGVGMHRFSKD+IPKRDLYFTAGM+ALKDAGIKFRD+GALYNGYIGGGMTEGIGFAKDLGLTGVPVTHVENASATGSSAFREAVWAVSGGQ +VAMA+GYDDMRL+GNP+++   GKKKLPSMENIMLPAGFFAMWAQRRMHENGTTIETFAK+AAKNWNHGRHNPM+QRRADH VT EEV+AADMVAYPHTAMMACASGAGAA AIVAT+ WA+K+ANGRP+IKVL+SQSQSE Y +GHIFMGAVVGPS STE+TG+ AY+EAGLGPKDI
Sbjct:    1 MNRDVYVIGVGMHRFSKDYIPKRDLYFTAGMDALKDAGIKFRDIGALYNGYIGGGMTEGIGFAKDLGLTGVPVTHVENASATGSSAFREAVWAVSGGQCEVAMALGYDDMRLMGNPMSRTVPGKKKLPSMENIMLPAGFFAMWAQRRMHENGTTIETFAKVAAKNWNHGRHNPMSQRRADHEVTVEEVLAADMVAYPHTAMMACASGAGAACAIVATKEWAQKYANGRPIIKVLASQSQSEVYNDGHIFMGAVVGPSSSTELTGQAAYKEAGLGPKDI 278          
BLAST of mRNA_P-wetherbeei_contig11456.1.1 vs. uniprot
Match: A0A352KHF4_9PROT (Transporter n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A352KHF4_9PROT)

HSP 1 Score: 445 bits (1144), Expect = 1.570e-154
Identity = 222/279 (79.57%), Postives = 247/279 (88.53%), Query Frame = 1
Query:    1 MNRDVYVIGVGMHRFSKDHIPKRDLYFTAGMEALKDAGIKFRDVGALYNGYIGGGMTEGIGFAKDLGLTGVPVTHVENASATGSSAFREAVWAVSGGQTDVAMAIGYDDMRLIGNPIAKPPSG-KKKLPSMENIMLPAGFFAMWAQRRMHENGTTIETFAKIAAKNWNHGRHNPMAQRRADHVVTAEEVMAADMVAYPHTAMMACASGAGAAGAIVATEAWAKKHANGRPMIKVLSSQSQSEHYGEGHIFMGAVVGPSYSTEITGRLAYEEAGLGPKDI 834
            MNRDVYVIGVGMHRF+K+++P RD+YFTAG+EALKDAGI FRDVG LYNGYIGGGM EG G+AKDLGLTG+PV HVENASATGSSAFREAVWAVSGG +DVAMA+G+DDM  +G    KP  G  K++PS EN +LPAGFFAMWA RRMHE GTT+ET+AKIAAKNWNHGRHNPMAQRRADH VTAEEV+AADMVAYPHTAMMACASGAGAA AIVATE WAKKHANGRPM+KV +SQ  SE Y +GHIFMGAVVGP+YSTE T +LAYEEAG+GP D+
Sbjct:    1 MNRDVYVIGVGMHRFTKEYVPIRDMYFTAGVEALKDAGIDFRDVGYLYNGYIGGGMMEGTGYAKDLGLTGIPVVHVENASATGSSAFREAVWAVSGGASDVAMALGFDDMARMGMARRKPAPGVDKRVPSFENTLLPAGFFAMWAVRRMHEAGTTVETYAKIAAKNWNHGRHNPMAQRRADHEVTAEEVLAADMVAYPHTAMMACASGAGAACAIVATEEWAKKHANGRPMVKVTASQLCSEVYTDGHIFMGAVVGPAYSTERTAKLAYEEAGIGPNDL 279          
BLAST of mRNA_P-wetherbeei_contig11456.1.1 vs. uniprot
Match: A0A2E6LT17_9GAMM (Transporter n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E6LT17_9GAMM)

HSP 1 Score: 423 bits (1088), Expect = 5.090e-146
Identity = 207/279 (74.19%), Postives = 242/279 (86.74%), Query Frame = 1
Query:    1 MNRDVYVIGVGMHRFSKDHIPKRDLYFTAGMEALKDAGIKFRDVGALYNGYIGGGMTEGIGFAKDLGLTGVPVTHVENASATGSSAFREAVWAVSGGQTDVAMAIGYDDMRLIGNPIAKPPSGKKK-LPSMENIMLPAGFFAMWAQRRMHENGTTIETFAKIAAKNWNHGRHNPMAQRRADHVVTAEEVMAADMVAYPHTAMMACASGAGAAGAIVATEAWAKKHANGRPMIKVLSSQSQSEHYGEGHIFMGAVVGPSYSTEITGRLAYEEAGLGPKDI 834
            MNR+VYVIGVGMH F+K ++P RD+YFTAG++AL+DAG+KFRD+G LYNGYIGGGM EG+G+AKDLG+TG+PV HVENASATGSSAFREAVWAVSGG  DVAMA+G+DDM   G P  KPP G+ K +P  E+I+LPAGFFAMWA RRMHE GTT+ETFA IAAKNWNH RHNPMAQRRADH +T EEV+AA MVAYPHTAMMACASGAGAA AIVAT  WA++ A GRP++KV++SQ QSE Y EGH+F+GAVVGP+ STE T +LAYEEAGLGP+D+
Sbjct:    1 MNREVYVIGVGMHLFTKGYVPLRDMYFTAGVDALEDAGLKFRDIGCLYNGYIGGGMMEGVGYAKDLGMTGLPVVHVENASATGSSAFREAVWAVSGGAADVAMAMGFDDMARSGMPRRKPPPGRNKAVPGFESILLPAGFFAMWAVRRMHEAGTTVETFAAIAAKNWNHARHNPMAQRRADHEITVEEVLAAPMVAYPHTAMMACASGAGAACAIVATREWAERLAGGRPLVKVVASQLQSEVYSEGHVFLGAVVGPASSTERTAQLAYEEAGLGPEDL 279          
BLAST of mRNA_P-wetherbeei_contig11456.1.1 vs. uniprot
Match: A0A352KP27_9GAMM (Transporter n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A352KP27_9GAMM)

HSP 1 Score: 356 bits (914), Expect = 1.200e-119
Identity = 181/278 (65.11%), Postives = 220/278 (79.14%), Query Frame = 1
Query:    1 MNRDVYVIGVGMHRFSKDHIPKRDLYFTAGMEALKDAGIKFRDVGALYNGYIGGGMTEGIGFAKDLGLTGVPVTHVENASATGSSAFREAVWAVSGGQTDVAMAIGYDDMRLIGNPIAKPPSGKKKLPSMENIMLPAGFFAMWAQRRMHENGTTIETFAKIAAKNWNHGRHNPMAQRRADHVVTAEEVMAADMVAYPHTAMMACASGAGAAGAIVATEAWAKKHANGRPMIKVLSSQSQSEHYGEGHIFMGAVVGPSYSTEITGRLAYEEAGLGPKDI 834
            M+ DVYVIGVGMH FSK     RD+ F AG  A++DAGIKF+DVG LYNGYIGG M EGI +AKD GLT VPV HVENASATGS+AFREAV AV  G+ ++AMA+G+DDM  +G  +A+   G++  P +E I+LPAGFFAMWA RRMHE+GTT+ETFAKIAAKNWNH R NPMAQR+A   VT EEV+A+ M+AYPHT+ M+C +G GAA AIVATEA AKK ANGRP++KV  SQ +SEHY EGH+F+GAVVGP   T++T +  YEE+G+GP D+
Sbjct:    1 MSNDVYVIGVGMHPFSKMCPSTRDMAFNAGTAAMEDAGIKFKDVGYLYNGYIGGMMLEGISYAKDFGLTNVPVVHVENASATGSTAFREAVNAVKAGEAEIAMALGFDDMMKMGMQMAQMMMGQE--PKIEQIVLPAGFFAMWAVRRMHEHGTTVETFAKIAAKNWNHARFNPMAQRQAKEEVTPEEVLASRMIAYPHTSKMSCGAGGGAACAIVATEAVAKKLANGRPLVKVAGSQMKSEHYTEGHVFLGAVVGPGELTQVTSQALYEESGIGPNDV 276          
BLAST of mRNA_P-wetherbeei_contig11456.1.1 vs. uniprot
Match: A0A2A5A3Y2_9GAMM (Transporter n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A2A5A3Y2_9GAMM)

HSP 1 Score: 349 bits (895), Expect = 9.450e-117
Identity = 176/275 (64.00%), Postives = 213/275 (77.45%), Query Frame = 1
Query:   10 DVYVIGVGMHRFSKDHIPKRDLYFTAGMEALKDAGIKFRDVGALYNGYIGGGMTEGIGFAKDLGLTGVPVTHVENASATGSSAFREAVWAVSGGQTDVAMAIGYDDMRLIGNPIAKPPSGKKKLPSMENIMLPAGFFAMWAQRRMHENGTTIETFAKIAAKNWNHGRHNPMAQRRADHVVTAEEVMAADMVAYPHTAMMACASGAGAAGAIVATEAWAKKHANGRPMIKVLSSQSQSEHYGEGHIFMGAVVGPSYSTEITGRLAYEEAGLGPKDI 834
            DVYVIGVGMH F K   P RD+ + AG EAL DAGIKF+DVGALYNGYIGGGM +GI +AKD GLT +P+THVENASATGS  FR+AV +V  G+T++AMA+G+DDM  +G  + K   G+   P +E I+LPA FFAMWA RRMHE GTT ETFAKIAAKNWNH R NP AQRR+DH VT EEV+A+  VAYPHT+ MACA+G GAA AI+  +  A+K+ANGRP++KV  SQS+SEHY  GH+F+GAVVGP   T +T +  YEE G+GPKD+
Sbjct:    4 DVYVIGVGMHAFQKMSPPVRDMAYVAGKEALNDAGIKFKDVGALYNGYIGGGMLDGITYAKDFGLTNIPITHVENASATGSCCFRQAVKSVQSGETEIAMALGFDDMIKMGMGMMKAMMGET--PKIEQIVLPAAFFAMWATRRMHEYGTTEETFAKIAAKNWNHARLNPYAQRRSDHEVTVEEVLASKPVAYPHTSKMACAAGGGAACAILGNKKMAEKYANGRPLVKVTGSQSKSEHYTPGHVFLGAVVGPGDLTRVTTQALYEETGVGPKDL 276          
BLAST of mRNA_P-wetherbeei_contig11456.1.1 vs. uniprot
Match: A0A4Z0FB43_9GAMM (Thiolase family protein n=4 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A4Z0FB43_9GAMM)

HSP 1 Score: 340 bits (871), Expect = 4.240e-113
Identity = 174/278 (62.59%), Postives = 213/278 (76.62%), Query Frame = 1
Query:    1 MNRDVYVIGVGMHRFSKDHIPKRDLYFTAGMEALKDAGIKFRDVGALYNGYIGGGMTEGIGFAKDLGLTGVPVTHVENASATGSSAFREAVWAVSGGQTDVAMAIGYDDMRLIGNPIAKPPSGKKKLPSMENIMLPAGFFAMWAQRRMHENGTTIETFAKIAAKNWNHGRHNPMAQRRADHVVTAEEVMAADMVAYPHTAMMACASGAGAAGAIVATEAWAKKHANGRPMIKVLSSQSQSEHYGEGHIFMGAVVGPSYSTEITGRLAYEEAGLGPKDI 834
            M  DVYV GVGMH F K     +++ + AG  ALKDAGIKFRDVGALYNGYI G MTEG+  AKDLGLTGVPV HVENASATGS+AFREA   V+ GQ D+AMA+G+DD+  +G  + +  + +   P +E+++LPA FFA+WA RR HE GT+ + +A+IAAKNWNH RHNPMAQR++DH VT EEV+A+  VA+PHT MMACA+G GAA AIV  + WAKK ANGRP+++VL+SQ QSE Y +GHIFMGAVVGPS  T  T +  YEEAGLGP D+
Sbjct:    1 MLEDVYVAGVGMHPFGKHGKSNKEMAYVAGKAALKDAGIKFRDVGALYNGYIMGDMTEGVAIAKDLGLTGVPVVHVENASATGSTAFREACLRVASGQADIAMALGFDDIVRMGQMMMQMFAAQG--PRIESMVLPAAFFALWAVRRTHEYGTSPDIYARIAAKNWNHARHNPMAQRQSDHEVTLEEVLASKPVAHPHTTMMACATGGGAACAIVTNKKWAKKLANGRPLVRVLASQLQSEQYVDGHIFMGAVVGPSELTRTTSQATYEEAGLGPNDV 276          
BLAST of mRNA_P-wetherbeei_contig11456.1.1 vs. uniprot
Match: UPI001C626E09 (thiolase family protein n=1 Tax=Iamia sp. SCSIO 61187 TaxID=2722752 RepID=UPI001C626E09)

HSP 1 Score: 321 bits (823), Expect = 7.400e-106
Identity = 163/277 (58.84%), Postives = 210/277 (75.81%), Query Frame = 1
Query:    4 NRDVYVIGVGMHRFSKDHIPKRDLYFTAGMEALKDAGIKFRDVGALYNGYIGGGMTEGIGFAKDLGLTGVPVTHVENASATGSSAFREAVWAVSGGQTDVAMAIGYDDMRLIGNPIAKPPSGKKKLPSMENIMLPAGFFAMWAQRRMHENGTTIETFAKIAAKNWNHGRHNPMAQRRADHVVTAEEVMAADMVAYPHTAMMACASGAGAAGAIVATEAWAKKHANGRPMIKVLSSQSQSEHYGEGHIFMGAVVGPSYSTEITGRLAYEEAGLGPKDI 834
            NRDVYV+GVGMH F+ + +P  D+ + AG+ AL+D+G+ F +VGALYNGYIGG +T G+  AKD GLTG+PVTHVENASATGS AF EAV AV+GG+ DVAMA+G+DDM  +G  + +   G+KK    E++MLPA FFAMWA RRMH+ GTT+ET+A IAAKNWNH R NPMAQRRADH +T EEV+A+ M++YPHT+ MACA+         A+EA A++   G P IKVL+SQ +SE Y +GH+F+GAV+GPS  T  T   AYE+AG+GP ++
Sbjct:    6 NRDVYVVGVGMHPFNNEGVPVSDMAYVAGIAALEDSGLDFPEVGALYNGYIGGAITAGVHIAKDFGLTGIPVTHVENASATGSCAFGEAVHAVAGGRVDVAMALGFDDMNRMGG-LGR---GRKKGLGAEDVMLPAAFFAMWATRRMHDAGTTVETYAAIAAKNWNHARQNPMAQRRADHEMTVEEVLASTMISYPHTSKMACAAXXXXXXXXXASEAVARRL--GGPKIKVLASQQRSETYTDGHVFLGAVIGPSQMTRDTAGAAYEQAGVGPAEL 276          
BLAST of mRNA_P-wetherbeei_contig11456.1.1 vs. uniprot
Match: A0A1X1ZLW7_9MYCO (Transporter n=16 Tax=Mycobacteriaceae TaxID=1762 RepID=A0A1X1ZLW7_9MYCO)

HSP 1 Score: 321 bits (822), Expect = 1.540e-105
Identity = 167/278 (60.07%), Postives = 204/278 (73.38%), Query Frame = 1
Query:    1 MNRDVYVIGVGMHRFSKDHIPKRDLYFTAGMEALKDAGIKFRDVGALYNGYIGGGMTEGIGFAKDLGLTGVPVTHVENASATGSSAFREAVWAVSGGQTDVAMAIGYDDMRLIGNPIAKPPSGKKKLPSMENIMLPAGFFAMWAQRRMHENGTTIETFAKIAAKNWNHGRHNPMAQRRADHVVTAEEVMAADMVAYPHTAMMACASGAGAAGAIVATEAWAKKHANGRPMIKVLSSQSQSEHYGEGHIFMGAVVGPSYSTEITGRLAYEEAGLGPKDI 834
            M RDVYVIGVGM  F +      DL F AG+ AL DAGI F +VG LYNGYIG G+  G+  AKDLGLTG+P+THVENASATGS AF EAV  V+GG  D+AMA+G+DD+      I     G K  P +  ++LPA FFAMWA RRMHE GTT+ETFA IAAKNWNH R NP AQRRADH VT EE++A+ M++YPHT+ MACA+G+GAA AIVA+   A++ A  RP++KV++SQ QSE + +GHIFMGAVVGP   T  T + AY+EAG+GP D+
Sbjct:   16 MARDVYVIGVGMAPFGQPDANAADLGFGAGVNALGDAGIGFDEVGYLYNGYIGAGLLTGVTLAKDLGLTGIPITHVENASATGSCAFHEAVQVVAGGSVDIAMALGFDDLNRATRAIG----GSK--PGIGQVILPAAFFAMWATRRMHEVGTTVETFAAIAAKNWNHARLNPYAQRRADHEVTVEEILASRMISYPHTSKMACAAGSGAAAAIVASREAAERVAGSRPLVKVVASQQQSEQFVDGHIFMGAVVGPGELTAATAKAAYDEAGVGPADL 287          
BLAST of mRNA_P-wetherbeei_contig11456.1.1 vs. uniprot
Match: A0A5Q2RJI3_9ACTN (Thiolase family protein n=2 Tax=Acidimicrobiales TaxID=84993 RepID=A0A5Q2RJI3_9ACTN)

HSP 1 Score: 316 bits (810), Expect = 6.870e-104
Identity = 166/278 (59.71%), Postives = 208/278 (74.82%), Query Frame = 1
Query:    1 MNRDVYVIGVGMHRFSKDHIPKRDLYFTAGMEALKDAGIKFRDVGALYNGYIGGGMTEGIGFAKDLGLTGVPVTHVENASATGSSAFREAVWAVSGGQTDVAMAIGYDDMRLIGNPIAKPPSGKKKLPSMENIMLPAGFFAMWAQRRMHENGTTIETFAKIAAKNWNHGRHNPMAQRRADHVVTAEEVMAADMVAYPHTAMMACASGAGAAGAIVATEAWAKKHANGRPMIKVLSSQSQSEHYGEGHIFMGAVVGPSYSTEITGRLAYEEAGLGPKDI 834
            M R V V+GVGMH F  D +   D+ + AG+ AL DAGI F +VGALYNGYIGGG+T G+  AKDLGLTG+PVTHVENASATGSSAF EAV AV+GG+ DVAMA+G+DDM  +G  + +  SGK+ L   E++MLPA FFAMWA RRMHE GTT+ETFA IAAKNWNH R NPMAQRRADH +T EE++A+ M++YPHT+ MACA+           E  A++   G PMI+V++SQ +SE Y +GH+F+GAV+GP+  T  T   AYE+AGLGP+D+
Sbjct:    5 MGRRVLVVGVGMHPFGNDGVAATDMGYVAGVAALDDAGIDFPEVGALYNGYIGGGITAGVHLAKDLGLTGLPVTHVENASATGSSAFGEAVHAVAGGRVDVAMALGFDDMNRMGG-LGR--SGKRGL-GAEDVMLPAAFFAMWATRRMHEVGTTVETFAAIAAKNWNHARENPMAQRRADHEMTVEEILASTMISYPHTSKMACAAXXXXXXXXXXXEDVARRL--GGPMIEVVASQQRSETYTDGHVFLGAVIGPAQMTRDTAADAYEQAGLGPRDL 276          
BLAST of mRNA_P-wetherbeei_contig11456.1.1 vs. uniprot
Match: A0A2E0RYA8_9ACTN (Transporter n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E0RYA8_9ACTN)

HSP 1 Score: 313 bits (803), Expect = 8.660e-103
Identity = 163/278 (58.63%), Postives = 203/278 (73.02%), Query Frame = 1
Query:    1 MNRDVYVIGVGMHRFSKDHIPKRDLYFTAGMEALKDAGIKFRDVGALYNGYIGGGMTEGIGFAKDLGLTGVPVTHVENASATGSSAFREAVWAVSGGQTDVAMAIGYDDMRLIGNPIAKPPSGKKKLPSMENIMLPAGFFAMWAQRRMHENGTTIETFAKIAAKNWNHGRHNPMAQRRADHVVTAEEVMAADMVAYPHTAMMACASGAGAAGAIVATEAWAKKHANGRPMIKVLSSQSQSEHYGEGHIFMGAVVGPSYSTEITGRLAYEEAGLGPKDI 834
            + + VYVIGVGMH F+ D +P   +   AGM AL DAGI+FR+VGALYNGY+GGG+T G+  AK+ GLTG+PVTHVENASATGS AF EAV AV GG+ DVAMA+G+DDM    N +     GK++    E+IMLPA FFAMWA RRMHE GTT  TFA+IAAKNWNH R NPMAQRRADH VT +EV+A+ M++YPHT+MMACA        IVAT   A++ A+GRP+++V +SQ +S       +F+GAV+GP+  T  T   AYE+AGLGP D+
Sbjct:    5 LGQPVYVIGVGMHPFNNDGLPSASMADVAGMTALADAGIEFREVGALYNGYLGGGVTSGVTIAKEFGLTGIPVTHVENASATGSCAFGEAVHAVGGGRVDVAMALGFDDM----NRMRGLGGGKRRRVGAEDIMLPAAFFAMWATRRMHEVGTTERTFAEIAAKNWNHARSNPMAQRRADHEVTVDEVLASTMISYPHTSMMACAXXXXXXXXIVATREVAERVADGRPLVRVAASQQRSXXXXXXXVFLGAVIGPAQMTRDTAGDAYEQAGLGPGDL 278          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11456.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C0TV56_9PROT1.260e-17488.13Transporter n=1 Tax=Alphaproteobacteria bacterium ... [more]
A0A352KHF4_9PROT1.570e-15479.57Transporter n=2 Tax=Alphaproteobacteria bacterium ... [more]
A0A2E6LT17_9GAMM5.090e-14674.19Transporter n=2 Tax=Gammaproteobacteria bacterium ... [more]
A0A352KP27_9GAMM1.200e-11965.11Transporter n=1 Tax=Gammaproteobacteria bacterium ... [more]
A0A2A5A3Y2_9GAMM9.450e-11764.00Transporter n=2 Tax=Gammaproteobacteria TaxID=1236... [more]
A0A4Z0FB43_9GAMM4.240e-11362.59Thiolase family protein n=4 Tax=Gammaproteobacteri... [more]
UPI001C626E097.400e-10658.84thiolase family protein n=1 Tax=Iamia sp. SCSIO 61... [more]
A0A1X1ZLW7_9MYCO1.540e-10560.07Transporter n=16 Tax=Mycobacteriaceae TaxID=1762 R... [more]
A0A5Q2RJI3_9ACTN6.870e-10459.71Thiolase family protein n=2 Tax=Acidimicrobiales T... [more]
A0A2E0RYA8_9ACTN8.660e-10358.63Transporter n=1 Tax=Acidimicrobiaceae bacterium Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11456contigP-wetherbeei_contig11456:2..835 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog525368.HMPREF0591_4463
PFAMsThiolase_C,Thiolase_N
Model size834
Max annot lvl201174|Actinobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.52e-106
EggNOG OGsCOG0183@1|root,COG0183@2|Bacteria,2IGBX@201174|Actinobacteria,23F1E@1762|Mycobacteriaceae
DescriptionThiolase, N-terminal domain
Cds size834
COG categoryI
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185912.3980262-CDS-P-wetherbeei_contig11456:1..8351683185912.3980262-CDS-P-wetherbeei_contig11456:1..835Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11456 2..835 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11456.1.1prot_P-wetherbeei_contig11456.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig11456 2..835 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig11456.1.1

>prot_P-wetherbeei_contig11456.1.1 ID=prot_P-wetherbeei_contig11456.1.1|Name=mRNA_P-wetherbeei_contig11456.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=278bp
MNRDVYVIGVGMHRFSKDHIPKRDLYFTAGMEALKDAGIKFRDVGALYNG
YIGGGMTEGIGFAKDLGLTGVPVTHVENASATGSSAFREAVWAVSGGQTD
VAMAIGYDDMRLIGNPIAKPPSGKKKLPSMENIMLPAGFFAMWAQRRMHE
NGTTIETFAKIAAKNWNHGRHNPMAQRRADHVVTAEEVMAADMVAYPHTA
MMACASGAGAAGAIVATEAWAKKHANGRPMIKVLSSQSQSEHYGEGHIFM
GAVVGPSYSTEITGRLAYEEAGLGPKDI
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mRNA from alignment at P-wetherbeei_contig11456:2..835-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig11456.1.1 ID=mRNA_P-wetherbeei_contig11456.1.1|Name=mRNA_P-wetherbeei_contig11456.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=834bp|location=Sequence derived from alignment at P-wetherbeei_contig11456:2..835- (Phaeothamnion wetherbeei SAG_119_79)
ATGAATAGAGACGTTTACGTTATCGGCGTAGGGATGCACCGGTTCTCCAA GGATCACATTCCCAAACGTGATCTGTATTTTACTGCGGGCATGGAAGCCC TTAAGGATGCGGGCATCAAATTCCGCGATGTTGGTGCGCTGTATAATGGT TATATTGGCGGCGGGATGACTGAAGGCATTGGTTTTGCAAAAGATCTGGG CCTTACCGGGGTTCCTGTCACGCATGTTGAAAATGCGTCCGCCACCGGTT CGTCGGCCTTCCGTGAAGCCGTATGGGCCGTTTCCGGCGGCCAGACTGAT GTCGCCATGGCGATTGGCTATGACGATATGCGCCTGATTGGAAATCCCAT AGCAAAGCCCCCAAGCGGCAAGAAAAAGCTGCCTTCGATGGAAAATATCA TGCTGCCCGCCGGCTTTTTCGCCATGTGGGCGCAACGCCGCATGCATGAA AACGGCACCACGATCGAAACCTTCGCCAAGATTGCAGCCAAAAACTGGAA TCACGGACGCCATAATCCCATGGCGCAACGCCGTGCGGATCATGTAGTGA CGGCGGAAGAAGTAATGGCCGCCGACATGGTCGCCTATCCGCATACCGCC ATGATGGCCTGCGCCAGCGGCGCGGGTGCGGCGGGCGCGATTGTCGCCAC CGAAGCCTGGGCGAAAAAGCACGCCAATGGCCGCCCGATGATCAAGGTGC TGTCGTCGCAATCACAATCCGAACATTATGGCGAAGGCCATATCTTCATG GGTGCGGTTGTGGGACCATCCTATTCGACGGAAATCACCGGCAGGCTGGC CTATGAAGAAGCCGGGCTTGGGCCAAAAGATATC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig11456:2..835-

>mRNA_P-wetherbeei_contig11456.1.1 ID=mRNA_P-wetherbeei_contig11456.1.1|Name=mRNA_P-wetherbeei_contig11456.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=834bp|location=Sequence derived from alignment at P-wetherbeei_contig11456:2..835- (Phaeothamnion wetherbeei SAG_119_79)
ATGAATAGAGACGTTTACGTTATCGGCGTAGGGATGCACCGGTTCTCCAA
GGATCACATTCCCAAACGTGATCTGTATTTTACTGCGGGCATGGAAGCCC
TTAAGGATGCGGGCATCAAATTCCGCGATGTTGGTGCGCTGTATAATGGT
TATATTGGCGGCGGGATGACTGAAGGCATTGGTTTTGCAAAAGATCTGGG
CCTTACCGGGGTTCCTGTCACGCATGTTGAAAATGCGTCCGCCACCGGTT
CGTCGGCCTTCCGTGAAGCCGTATGGGCCGTTTCCGGCGGCCAGACTGAT
GTCGCCATGGCGATTGGCTATGACGATATGCGCCTGATTGGAAATCCCAT
AGCAAAGCCCCCAAGCGGCAAGAAAAAGCTGCCTTCGATGGAAAATATCA
TGCTGCCCGCCGGCTTTTTCGCCATGTGGGCGCAACGCCGCATGCATGAA
AACGGCACCACGATCGAAACCTTCGCCAAGATTGCAGCCAAAAACTGGAA
TCACGGACGCCATAATCCCATGGCGCAACGCCGTGCGGATCATGTAGTGA
CGGCGGAAGAAGTAATGGCCGCCGACATGGTCGCCTATCCGCATACCGCC
ATGATGGCCTGCGCCAGCGGCGCGGGTGCGGCGGGCGCGATTGTCGCCAC
CGAAGCCTGGGCGAAAAAGCACGCCAATGGCCGCCCGATGATCAAGGTGC
TGTCGTCGCAATCACAATCCGAACATTATGGCGAAGGCCATATCTTCATG
GGTGCGGTTGTGGGACCATCCTATTCGACGGAAATCACCGGCAGGCTGGC
CTATGAAGAAGCCGGGCTTGGGCCAAAAGATATC
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