mRNA_P-wetherbeei_contig11268.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig11268.1.1
Unique NamemRNA_P-wetherbeei_contig11268.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig11268.1.1 vs. uniprot
Match: A0A3L8C7K4_9GAMM (Peptidase M16 (Fragment) n=1 Tax=Ketobacter sp. TaxID=2083498 RepID=A0A3L8C7K4_9GAMM)

HSP 1 Score: 193 bits (490), Expect = 1.170e-57
Identity = 93/168 (55.36%), Postives = 122/168 (72.62%), Query Frame = 1
Query:    1 AWLINSQVNFVAKAYAAVPEDHADAPLFAVLGRYLQDGFLHGEIREKGGAYGSGASYDTDSATFRFYSYRDPRAMATLQDFDRALAWF-ATDHDAQRLEEAILGTIRALDQPRSPAGECERAFSNWLYGRDDAFRQRFRARVLEANHEALRAIAARYLDPTRGQLGVV 501
            +WL ++QVNF AKAY  VP DH D+P+ +VLG +L++G+LH  IRE+GGAYG GAS + + A FRFYSYRDPR   TL+DFD+++ W    DH  Q LEEAILG I ALD+P SPAGE ++AF N L+GRD+AF+QRFR RVL    + L+ +A+ YL P +    V+
Sbjct:  180 SWLTSTQVNFCAKAYPTVPSDHPDSPVLSVLGGFLRNGYLHRAIREQGGAYGGGASQEANIAAFRFYSYRDPRLTETLRDFDQSIEWLLGKDHGYQPLEEAILGVISALDKPSSPAGEAKQAFQNRLFGRDEAFQQRFRERVLSTTLDDLKRVASTYLKPEQASTAVI 347          
BLAST of mRNA_P-wetherbeei_contig11268.1.1 vs. uniprot
Match: A0A7C2N9U5_9GAMM (Peptidase M16 n=1 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A7C2N9U5_9GAMM)

HSP 1 Score: 185 bits (469), Expect = 1.530e-54
Identity = 94/168 (55.95%), Postives = 120/168 (71.43%), Query Frame = 1
Query:    1 AWLINSQVNFVAKAYAAVPEDHADAPLFAVLGRYLQDGFLHGEIREKGGAYGSGASYDTDSATFRFYSYRDPRAMATLQDFDRALAWFATD-HDAQRLEEAILGTIRALDQPRSPAGECERAFSNWLYGRDDAFRQRFRARVLEANHEALRAIAARYLDPTRGQLGVV 501
            AWL N+QV+F AKAY AV  DHADA   A+LG YL++GFLH  IRE+GGAYG G+SYD +SA+FRF+SYRDPR   TL DFDRAL W   + H AQ LEEA+L  I ++D+P SPAGE ++AF N L+G     R  +RAR+L+   + LR +A RYL P +  +GV+
Sbjct:  177 AWLTNTQVHFCAKAYPAVAIDHADAGPLALLGAYLRNGFLHRAIREQGGAYGGGSSYDPESASFRFFSYRDPRLSDTLADFDRALDWLHGEGHTAQALEEALLSVISSIDKPGSPAGEAKKAFHNGLHGLTPERRMAYRARLLDVTLDDLRRVAGRYLVPAQASIGVL 344          
BLAST of mRNA_P-wetherbeei_contig11268.1.1 vs. uniprot
Match: A0A3L8B4X6_9GAMM (Peptidase M16 n=7 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A3L8B4X6_9GAMM)

HSP 1 Score: 193 bits (490), Expect = 5.040e-54
Identity = 95/168 (56.55%), Postives = 121/168 (72.02%), Query Frame = 1
Query:    1 AWLINSQVNFVAKAYAAVPEDHADAPLFAVLGRYLQDGFLHGEIREKGGAYGSGASYDTDSATFRFYSYRDPRAMATLQDFDRALAWF-ATDHDAQRLEEAILGTIRALDQPRSPAGECERAFSNWLYGRDDAFRQRFRARVLEANHEALRAIAARYLDPTRGQLGVV 501
            AWL ++QVNF AKAY  VP DH D+P+ +VLG +L++G+LH  IRE+GGAYG GAS +++ A FRFYSYRDPR   TL DFDR++ W    DH  Q LEEAILG I ALD+P SPAGE ++AF N L+GRDDAF+ RFR RVL    + L+ +A  YL P +  + V+
Sbjct:  796 AWLTSTQVNFCAKAYPTVPSDHPDSPVLSVLGGFLRNGYLHRAIREQGGAYGGGASQESNIAAFRFYSYRDPRLAETLADFDRSVEWLLGKDHGYQVLEEAILGVIGALDKPSSPAGEAKQAFQNRLFGRDDAFQARFRERVLATTTDDLKRVAQTYLIPEQASMAVI 963          
BLAST of mRNA_P-wetherbeei_contig11268.1.1 vs. uniprot
Match: A0A2E2HBM7_9GAMM (Peptidase M16 n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E2HBM7_9GAMM)

HSP 1 Score: 192 bits (488), Expect = 9.280e-54
Identity = 96/168 (57.14%), Postives = 119/168 (70.83%), Query Frame = 1
Query:    1 AWLINSQVNFVAKAYAAVPEDHADAPLFAVLGRYLQDGFLHGEIREKGGAYGSGASYDTDSATFRFYSYRDPRAMATLQDFDRALAWFATD-HDAQRLEEAILGTIRALDQPRSPAGECERAFSNWLYGRDDAFRQRFRARVLEANHEALRAIAARYLDPTRGQLGVV 501
            AWL NSQVNF A AY  VP  HADAP   VLG +L++GFLH  IREKGGAYG+GAS D+ SA+FRF+SYRDPR   TL DFDRAL W   D H+  +LEEAILG I +LD+P SPAG  ++A+ N L+GRD  +R RFR  VLE +  AL+ +A  Y  P +  +G++
Sbjct:  789 AWLCNSQVNFCALAYPTVPSGHADAPALTVLGGFLRNGFLHSAIREKGGAYGAGASQDSGSASFRFFSYRDPRLEETLNDFDRALDWLQQDSHEYSQLEEAILGVISSLDRPASPAGTAKQAYYNELFGRDREYRARFRQEVLEVDIPALQRVAESYFRPEQRSIGII 956          
BLAST of mRNA_P-wetherbeei_contig11268.1.1 vs. uniprot
Match: A7BLD7_9GAMM (Metalloprotease n=1 Tax=Beggiatoa sp. SS TaxID=422288 RepID=A7BLD7_9GAMM)

HSP 1 Score: 178 bits (452), Expect = 2.290e-53
Identity = 92/168 (54.76%), Postives = 112/168 (66.67%), Query Frame = 1
Query:    1 AWLINSQVNFVAKAYAAVPEDHADAPLFAVLGRYLQDGFLHGEIREKGGAYGSGASYDTDSATFRFYSYRDPRAMATLQDFDRALAWFA-TDHDAQRLEEAILGTIRALDQPRSPAGECERAFSNWLYGRDDAFRQRFRARVLEANHEALRAIAARYLDPTRGQLGVV 501
            AW  N+QVNF AKAY  V   H DAP   VLG +LQ+G+LH  IRE+GGAYGSG+ YD D+  FRFYSYRDPR + TL DFD AL W   T+H+ + LEEAILG I  +D+P SPAGE   +F N L+GR  A R+ FR RVL+     L+ +A  YL P R  L V+
Sbjct:   60 AWRTNTQVNFCAKAYPTVSSGHPDAPPLMVLGPFLQNGYLHTAIREQGGAYGSGSGYDGDTGAFRFYSYRDPRLVETLADFDHALNWLQETEHEQRTLEEAILGVISRIDRPGSPAGEAITSFFNSLHGRTPAQRRDFRHRVLQVTIADLQRVAKHYLQPERAHLAVL 227          
BLAST of mRNA_P-wetherbeei_contig11268.1.1 vs. uniprot
Match: A0A3L8BV64_9GAMM (Peptidase M16 n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A3L8BV64_9GAMM)

HSP 1 Score: 188 bits (478), Expect = 2.210e-52
Identity = 92/167 (55.09%), Postives = 120/167 (71.86%), Query Frame = 1
Query:    4 WLINSQVNFVAKAYAAVPEDHADAPLFAVLGRYLQDGFLHGEIREKGGAYGSGASYDTDSATFRFYSYRDPRAMATLQDFDRALAWFATD-HDAQRLEEAILGTIRALDQPRSPAGECERAFSNWLYGRDDAFRQRFRARVLEANHEALRAIAARYLDPTRGQLGVV 501
            WL ++QVNF AKAY  VP DH D+P+ +VLG +L++G+LH  IRE+GGAYG GAS +++ A FRFYSYRDPR   TL+DFD ++ W  +  H  Q LEEAILG I ALD+P SPAGE ++AF N L+GRD+AF+QRFR RVL    + L+ +A  YL P +    V+
Sbjct:  797 WLTSTQVNFCAKAYPTVPSDHPDSPILSVLGGFLRNGYLHRAIREQGGAYGGGASQESNIAAFRFYSYRDPRLADTLRDFDDSIEWLLSKAHGYQALEEAILGVISALDKPSSPAGEAKQAFQNRLFGRDEAFQQRFRERVLATTVDDLKRVAGTYLVPDQASTAVI 963          
BLAST of mRNA_P-wetherbeei_contig11268.1.1 vs. uniprot
Match: A0A545SK09_9GAMM (Peptidase M16 n=1 Tax=Halothiobacillaceae bacterium TaxID=2268194 RepID=A0A545SK09_9GAMM)

HSP 1 Score: 188 bits (477), Expect = 2.970e-52
Identity = 95/168 (56.55%), Postives = 119/168 (70.83%), Query Frame = 1
Query:    1 AWLINSQVNFVAKAYAAVPEDHADAPLFAVLGRYLQDGFLHGEIREKGGAYGSGASYDTDSATFRFYSYRDPRAMATLQDFDRALAWFATD-HDAQRLEEAILGTIRALDQPRSPAGECERAFSNWLYGRDDAFRQRFRARVLEANHEALRAIAARYLDPTRGQLGVV 501
            AWL N+QV+F AK Y AVP DH DA   A+LG YL++GFLH  IRE+GGAYG GASYD +SA+FRFYSYRDPR   TL DFDRA+ W   D H AQ LEEA+L  I ++D+P SPAGE ++AF N L+G     R  +RAR+L+   + LR +A+ YL P +  LGV+
Sbjct:  789 AWLTNTQVHFCAKVYPAVPVDHPDAGPLALLGAYLRNGFLHRAIREQGGAYGGGASYDPESASFRFYSYRDPRLSDTLADFDRAIDWLHADGHSAQALEEALLSVISSIDKPGSPAGEAKKAFHNALHGATPERRMAYRARLLDVTLDDLRRVASVYLKPEQASLGVL 956          
BLAST of mRNA_P-wetherbeei_contig11268.1.1 vs. uniprot
Match: A0A1M4VKZ8_9GAMM (M16C_associated domain-containing protein n=1 Tax=Microbulbifer donghaiensis TaxID=494016 RepID=A0A1M4VKZ8_9GAMM)

HSP 1 Score: 187 bits (476), Expect = 4.020e-52
Identity = 95/167 (56.89%), Postives = 117/167 (70.06%), Query Frame = 1
Query:    4 WLINSQVNFVAKAYAAVPEDHADAPLFAVLGRYLQDGFLHGEIREKGGAYGSGASYDTDSATFRFYSYRDPRAMATLQDFDRALAWFATD-HDAQRLEEAILGTIRALDQPRSPAGECERAFSNWLYGRDDAFRQRFRARVLEANHEALRAIAARYLDPTRGQLGVV 501
            WL NSQVNF AKAYA VP  H DA   AVLG +L++G+LH  IRE+GGAYG GAS+D++   FRFYSYRDPR   TL DFD +L W AT+ H  +++EEAILG + ALD+P SPAGE ++AF + LYGR  A RQ FR +V E N E L+ +A  YL P +    VV
Sbjct:  785 WLANSQVNFCAKAYATVPMTHPDAAPLAVLGGFLRNGYLHRTIREQGGAYGGGASHDSNIGVFRFYSYRDPRMEETLNDFDASLKWLATEKHKDEQVEEAILGVVGALDKPGSPAGEAKKAFHSNLYGRSHAVRQEFRRQVTEVNLEDLKRVATSYLKPEKASTAVV 951          
BLAST of mRNA_P-wetherbeei_contig11268.1.1 vs. uniprot
Match: A0A359EQD1_9GAMM (Peptidase M16 (Fragment) n=1 Tax=Halieaceae bacterium TaxID=2026743 RepID=A0A359EQD1_9GAMM)

HSP 1 Score: 176 bits (447), Expect = 1.060e-51
Identity = 89/167 (53.29%), Postives = 110/167 (65.87%), Query Frame = 1
Query:    4 WLINSQVNFVAKAYAAVPEDHADAPLFAVLGRYLQDGFLHGEIREKGGAYGSGASYDTDSATFRFYSYRDPRAMATLQDFDRALAWFA-TDHDAQRLEEAILGTIRALDQPRSPAGECERAFSNWLYGRDDAFRQRFRARVLEANHEALRAIAARYLDPTRGQLGVV 501
            W+ N+QVNF A+AY  V   H DAP   VLG +L++G+LH  IRE+GGAYG GA  D+  A FRFYSYRDPR + TLQDFD ++ W   T HD + LEEAILG I ++D+P SPAGE  + F N L+GR  A R+ FR  +LE   E LR + A YL P R    VV
Sbjct:  133 WVANTQVNFCARAYPTVAIGHPDAPALTVLGGFLRNGYLHRAIREQGGAYGGGAGQDSGIAAFRFYSYRDPRLLDTLQDFDESVRWLLETQHDPRALEEAILGVISSVDKPASPAGEARQHFYNTLFGRSHAQREAFRQGILEVTLEDLRRVGASYLTPERASTAVV 299          
BLAST of mRNA_P-wetherbeei_contig11268.1.1 vs. uniprot
Match: A0A496VII7_9GAMM (Peptidase M16 (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A496VII7_9GAMM)

HSP 1 Score: 172 bits (437), Expect = 1.290e-51
Identity = 84/168 (50.00%), Postives = 114/168 (67.86%), Query Frame = 1
Query:    1 AWLINSQVNFVAKAYAAVPEDHADAPLFAVLGRYLQDGFLHGEIREKGGAYGSGASYDTDSATFRFYSYRDPRAMATLQDFDRALAWFA-TDHDAQRLEEAILGTIRALDQPRSPAGECERAFSNWLYGRDDAFRQRFRARVLEANHEALRAIAARYLDPTRGQLGVV 501
            AW  ++QVNF AKAY +V   H DAP+  VLG +L++G+LH  +RE+GGAYG GA+Y+ D+  FRF+SYRDPR + TL DFD++L W   T H+ + LEEAILG +  +D+P SPAGE   +F N LYGR    R+ FR RVL+     L+ +AA YL P +  + V+
Sbjct:   21 AWQTHTQVNFCAKAYPSVAAGHPDAPILVVLGNFLRNGYLHRTLREQGGAYGGGANYNGDTGAFRFFSYRDPRLVETLADFDQSLIWLQETHHEPRTLEEAILGVVSRIDRPGSPAGEAMTSFFNSLYGRTPEQRREFRQRVLQVKIADLQRVAATYLQPEKANVAVL 188          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11268.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3L8C7K4_9GAMM1.170e-5755.36Peptidase M16 (Fragment) n=1 Tax=Ketobacter sp. Ta... [more]
A0A7C2N9U5_9GAMM1.530e-5455.95Peptidase M16 n=1 Tax=Chromatiales bacterium TaxID... [more]
A0A3L8B4X6_9GAMM5.040e-5456.55Peptidase M16 n=7 Tax=Gammaproteobacteria TaxID=12... [more]
A0A2E2HBM7_9GAMM9.280e-5457.14Peptidase M16 n=1 Tax=Gammaproteobacteria bacteriu... [more]
A7BLD7_9GAMM2.290e-5354.76Metalloprotease n=1 Tax=Beggiatoa sp. SS TaxID=422... [more]
A0A3L8BV64_9GAMM2.210e-5255.09Peptidase M16 n=2 Tax=Gammaproteobacteria TaxID=12... [more]
A0A545SK09_9GAMM2.970e-5256.55Peptidase M16 n=1 Tax=Halothiobacillaceae bacteriu... [more]
A0A1M4VKZ8_9GAMM4.020e-5256.89M16C_associated domain-containing protein n=1 Tax=... [more]
A0A359EQD1_9GAMM1.060e-5153.29Peptidase M16 (Fragment) n=1 Tax=Halieaceae bacter... [more]
A0A496VII7_9GAMM1.290e-5150.00Peptidase M16 (Fragment) n=1 Tax=Gammaproteobacter... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11268contigP-wetherbeei_contig11268:1670..2170 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog472759.Nhal_1875
PFAMsM16C_assoc,Peptidase_M16,Peptidase_M16_C
Model size501
Max annot lvl1236|Gammaproteobacteria
KEGG koko:K06972
Hectar predicted targeting categoryother localisation
Exons1
Evalue6.13e-52
EggNOG OGsCOG1026@1|root,COG1026@2|Bacteria,1MVDJ@1224|Proteobacteria,1RYNI@1236|Gammaproteobacteria
DescriptionPeptidase, M16
Cds size501
COG categoryS
BRITEko00000,ko01000,ko01002
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185904.8733342-CDS-P-wetherbeei_contig11268:1669..21701683185904.8733342-CDS-P-wetherbeei_contig11268:1669..2170Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11268 1670..2170 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11268.1.1prot_P-wetherbeei_contig11268.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig11268 1670..2170 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig11268.1.1

>prot_P-wetherbeei_contig11268.1.1 ID=prot_P-wetherbeei_contig11268.1.1|Name=mRNA_P-wetherbeei_contig11268.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=167bp
AWLINSQVNFVAKAYAAVPEDHADAPLFAVLGRYLQDGFLHGEIREKGGA
YGSGASYDTDSATFRFYSYRDPRAMATLQDFDRALAWFATDHDAQRLEEA
ILGTIRALDQPRSPAGECERAFSNWLYGRDDAFRQRFRARVLEANHEALR
AIAARYLDPTRGQLGVV
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mRNA from alignment at P-wetherbeei_contig11268:1670..2170-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig11268.1.1 ID=mRNA_P-wetherbeei_contig11268.1.1|Name=mRNA_P-wetherbeei_contig11268.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=501bp|location=Sequence derived from alignment at P-wetherbeei_contig11268:1670..2170- (Phaeothamnion wetherbeei SAG_119_79)
GCCTGGCTGATCAACTCACAGGTCAATTTCGTTGCCAAGGCCTATGCCGC CGTGCCGGAAGATCATGCCGATGCACCCTTATTCGCGGTGCTAGGTCGTT ATCTGCAGGACGGTTTCCTGCATGGCGAGATCCGTGAGAAGGGCGGCGCC TATGGGTCGGGTGCGAGCTACGACACCGACAGTGCGACTTTCCGCTTCTA TTCCTATCGCGACCCGCGCGCGATGGCGACCTTGCAAGATTTCGATCGTG CGCTGGCCTGGTTCGCTACAGACCACGACGCGCAACGTCTGGAAGAAGCT ATCCTCGGTACGATTCGCGCCCTCGATCAGCCACGCTCACCCGCCGGCGA ATGCGAACGGGCGTTCAGCAATTGGCTGTATGGTCGCGATGATGCTTTCC GTCAACGCTTCCGCGCACGGGTGCTGGAGGCGAATCATGAAGCATTGCGT GCGATCGCCGCGCGCTATCTCGATCCAACCCGTGGTCAGTTGGGTGTGGT G
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Coding sequence (CDS) from alignment at P-wetherbeei_contig11268:1670..2170-

>mRNA_P-wetherbeei_contig11268.1.1 ID=mRNA_P-wetherbeei_contig11268.1.1|Name=mRNA_P-wetherbeei_contig11268.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=501bp|location=Sequence derived from alignment at P-wetherbeei_contig11268:1670..2170- (Phaeothamnion wetherbeei SAG_119_79)
GCCTGGCTGATCAACTCACAGGTCAATTTCGTTGCCAAGGCCTATGCCGC
CGTGCCGGAAGATCATGCCGATGCACCCTTATTCGCGGTGCTAGGTCGTT
ATCTGCAGGACGGTTTCCTGCATGGCGAGATCCGTGAGAAGGGCGGCGCC
TATGGGTCGGGTGCGAGCTACGACACCGACAGTGCGACTTTCCGCTTCTA
TTCCTATCGCGACCCGCGCGCGATGGCGACCTTGCAAGATTTCGATCGTG
CGCTGGCCTGGTTCGCTACAGACCACGACGCGCAACGTCTGGAAGAAGCT
ATCCTCGGTACGATTCGCGCCCTCGATCAGCCACGCTCACCCGCCGGCGA
ATGCGAACGGGCGTTCAGCAATTGGCTGTATGGTCGCGATGATGCTTTCC
GTCAACGCTTCCGCGCACGGGTGCTGGAGGCGAATCATGAAGCATTGCGT
GCGATCGCCGCGCGCTATCTCGATCCAACCCGTGGTCAGTTGGGTGTGGT
G
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