mRNA_P-wetherbeei_contig11265.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig11265.1.1 vs. uniprot
Match: A0A7S1XLN8_9STRA (Kinetochore protein SPC25 n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XLN8_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 7.630e-22 Identity = 55/114 (48.25%), Postives = 75/114 (65.79%), Query Frame = 1
Query: 436 LDEKQREEATRRRRKEQEINDLTRGVVFFKYLGLEFEHAGTGGEDEEAFLRLIFTQIDPEDPNRRFAFTVRVDASDAYHVANAAPPVPEEVVAPLLAELNATNDFSGFVRAMRR 777
L+E +R A R + E N+LTRGV+ +K LGL+FE A D+ LRLIFTQ+DP +P R F+F V VD + YHV+ +PP+P +V+ P+LA LNA N+F FV +RR
Sbjct: 1 LEELRRALAEAERARAAEHNELTRGVLLYKRLGLDFERA----HDDR--LRLIFTQLDPREPLRPFSFCVHVDDNSTYHVSECSPPLPADVIDPMLAALNAQNNFGAFVCGLRR 108
BLAST of mRNA_P-wetherbeei_contig11265.1.1 vs. uniprot
Match: W7TNF4_9STRA (Kinetochore protein SPC25 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TNF4_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 1.310e-18 Identity = 49/101 (48.51%), Postives = 67/101 (66.34%), Query Frame = 1
Query: 490 INDLTRGVVFFKYLGLEFEHAGTGGEDEEAFLRLIFTQIDPEDPNRRFAFTVRVDASDAYHVANAAPPVPEEVVAPLLAELNATNDFSGFVRAMRRFFVST 792
INDLTRGVV +K+LGL+FE A ++ LRLIFTQ+D +P+R + F+V +D +D Y V P + +V L+AELN NDF+ FV+ MRR F +T
Sbjct: 148 INDLTRGVVMYKHLGLDFERA------DDNKLRLIFTQLDATNPSREYFFSVHIDEADRYRVEECDPTLDTAMVDGLVAELNQANDFAVFVKKMRRAFKAT 242
BLAST of mRNA_P-wetherbeei_contig11265.1.1 vs. uniprot
Match: A0A7S1G7N0_9STRA (Kinetochore protein SPC25 n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G7N0_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 3.350e-17 Identity = 65/148 (43.92%), Postives = 85/148 (57.43%), Query Frame = 1
Query: 370 EREVLPVKLRELQALRT-----ELERQLDEKQREEATRRRRKEQEINDLTRGVVFFKYLGLEFEHAGTGGEDEEAFLRLIFTQIDPEDPNRRFAFTVRVDASDAYHVANAAPPVPEEVVAPLLAELNATNDFSGFVRAMRRFFVSTTA 798
+R+ LP E++AL T E ER+L EK A++R +++LT+GV F+K LGL+F+ G E LRL FTQIDP P+R F FTV V + Y V + +PPV V + ELN TNDFS FVR MRR F + A
Sbjct: 64 DRDALPT---EIEALHTATEAAEAERELVEKS--VASKRAEATYAVDELTKGVAFYKRLGLDFDGLG------EDVLRLTFTQIDPAAPDREFTFTVNVTDDNVYVVRDVSPPVAG--VEEMCEELNETNDFSFFVRRMRREFCALVA 198
BLAST of mRNA_P-wetherbeei_contig11265.1.1 vs. uniprot
Match: A0A2R5G4Q6_9STRA (Kinetochore protein SPC25 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G4Q6_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 7.740e-17 Identity = 55/128 (42.97%), Postives = 71/128 (55.47%), Query Frame = 1
Query: 415 RTELERQLDEKQREEATRRRRKEQEINDLTRGVVFFKYLGLEFEHAGTGGEDEEAFLRLIFTQIDPEDPNRRFAFTVRVDASDAYHVANAAPPVPEEVVAPLLAELNATNDFSGFVRAMRRFFVSTTA 798
RTEL L K+ + R ++ + LTRG +K LGLEF+ D+ LRL FTQIDP DP+R F F + VD D YHV P V ++ L+ +NATNDFS FVR+MR F + A
Sbjct: 119 RTELLGTLGAKEADIEAERETQQHRVAQLTRGATLYKKLGLEFQR------DDNTRLRLSFTQIDPRDPDREFFFVIFVDKDDCYHVEQVEPAVGS--ISDLIRRVNATNDFSSFVRSMRTKFQALCA 238
BLAST of mRNA_P-wetherbeei_contig11265.1.1 vs. uniprot
Match: A0A7S2C3P1_9STRA (Kinetochore protein SPC25 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C3P1_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 2.630e-15 Identity = 45/98 (45.92%), Postives = 59/98 (60.20%), Query Frame = 1
Query: 490 INDLTRGVVFFKYLGLEFEHAGTGGEDEEAFLRLIFTQIDPEDPNRRFAFTVRVDASDAYHVANAAPPVPEEVVAPLLAELNATNDFSGFVRAMRRFF 783
+ +LTRGV+ +K LGLEFE A E +L + FTQIDP D NR F F + V + D+Y V P + + L+AE+N TNDF FVR MR+ F
Sbjct: 68 MKELTRGVLMYKCLGLEFERAN------EDWLCVRFTQIDPADHNREFIFWISVGSDDSYQVQGCTPEINAGRLGGLVAEVNQTNDFGRFVRQMRKAF 159
BLAST of mRNA_P-wetherbeei_contig11265.1.1 vs. uniprot
Match: A0A7S0HCM2_9EUKA (Kinetochore protein SPC25 n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HCM2_9EUKA) HSP 1 Score: 80.9 bits (198), Expect = 3.640e-14 Identity = 48/102 (47.06%), Postives = 65/102 (63.73%), Query Frame = 1
Query: 481 EQEINDLTRG-VVFFKYLGLEFEHAGTGGEDEEAFLRLIFTQIDPEDPNRRFAFTVRVDASDAYHVANAAPPVPEEVVAPLLAELNATNDFSGFVRAMRRFF 783
EQ++++L +G ++ K+LGLEFE EDE LR++FT +DP+ P R F F V VD+SD YHV P V + V L+ LN +NDFS FVR MR+ F
Sbjct: 130 EQKLSELQKGGSMYKKWLGLEFERV----EDER--LRIVFTHVDPQAPTRAFTFYVYVDSSDRYHVVKCEPEVHD--VQSLVDALNTSNDFSAFVRNMRKRF 223
BLAST of mRNA_P-wetherbeei_contig11265.1.1 vs. uniprot
Match: A0A7R9WR30_9STRA (Kinetochore protein SPC25 n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WR30_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 1.080e-13 Identity = 43/109 (39.45%), Postives = 65/109 (59.63%), Query Frame = 1
Query: 469 RRRKEQEINDLTRGVVFFKYLGLEFEHAGTGGEDEEAFLRLIFTQIDPEDPNRRFAFTVRV-DASDAYHVANAAPPVPEEVVAPLLAELNATNDFSGFVRAMRRFFVST 792
R K+ ++DLTRG+V +KYLG +FE +E LR+ FTQ+DP PNR F+F + V DA + Y++ P + V +L E+N ++D + +R MR+ FV T
Sbjct: 49 REAKQTTVDDLTRGLVNYKYLGFDFEKC-----EETNALRIAFTQLDPAFPNREFSFILLVNDADNQYYIHGCQPNLDATAVTKILKEINRSDDVALMIRQMRKEFVRT 152
BLAST of mRNA_P-wetherbeei_contig11265.1.1 vs. uniprot
Match: B7FVW8_PHATC (Kinetochore protein SPC25 n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FVW8_PHATC) HSP 1 Score: 79.0 bits (193), Expect = 2.600e-13 Identity = 41/107 (38.32%), Postives = 66/107 (61.68%), Query Frame = 1
Query: 478 KEQEINDLTRGVVFFKYLGLEFEHAGTGGEDEEAFLRLIFTQIDPEDPNRRFAFTVRVD-ASDAYHVANAAPPVPEEVVAPLLAELNATNDFSGFVRAMRRFFVSTT 795
K+ + DLT+G+V ++YLG++F+ A ++ ++ FTQ+DP P R+F+F ++VD D Y V PP+PE ++ LL++LNA +D FV MR F + T
Sbjct: 148 KQTTLEDLTKGIVNYQYLGIDFQKA------QDNHMKFYFTQLDPTQPKRQFSFLLQVDDVDDQYIVDVCDPPIPEHILNELLSDLNADDDMLPFVIGMRHAFKAHT 248
BLAST of mRNA_P-wetherbeei_contig11265.1.1 vs. uniprot
Match: A0A7R9WSN0_9STRA (Kinetochore protein SPC25 n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WSN0_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 6.570e-13 Identity = 43/109 (39.45%), Postives = 65/109 (59.63%), Query Frame = 1
Query: 469 RRRKEQEINDLTRGVVFFKYLGLEFEHAGTGGEDEEAFLRLIFTQIDPEDPNRRFAFTVRV-DASDAYHVANAAPPVPEEVVAPLLAELNATNDFSGFVRAMRRFFVST 792
R K+ ++DLTRG+V +KYLG +FE +E LR+ FTQ+DP PNR F+F + V DA + Y++ P + V +L E+N ++D + +R MR+ FV T
Sbjct: 142 REAKQTTVDDLTRGLVNYKYLGFDFEKC-----EETNALRIAFTQLDPAFPNREFSFILLVNDADNQYYIHGCQPNLDATAVTKILKEINRSDDVALMIRQMRKEFVRT 245
BLAST of mRNA_P-wetherbeei_contig11265.1.1 vs. uniprot
Match: A0A482REE4_9ARCH (Spindle_Spc25 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482REE4_9ARCH) HSP 1 Score: 73.6 bits (179), Expect = 2.180e-12 Identity = 42/104 (40.38%), Postives = 65/104 (62.50%), Query Frame = 1
Query: 487 EINDLTRGVVFFKYLGLEFEHAGTGGEDEEAFLRLIFTQIDPEDPNRRFAFTVRVDASDAYHVANAAPPVPEEVVAPLLAELNATNDFSGFVRAMRRFFVSTTA 798
++ +LT+GV ++K LGL F+ E +RL+FT IDP ++ F F +R+ +++A+ V PPV ++ L+AELN TN+FS FV+ MR+ FV T A
Sbjct: 25 QMQELTKGVSYYKRLGLTFQTI------EHDRVRLVFTLIDPTAVDKPFFFDIRLASNEAFEVLEVQPPVSG--LSALVAELNETNNFSRFVQLMRQKFVETAA 120 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11265.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig11265.1.1 >prot_P-wetherbeei_contig11265.1.1 ID=prot_P-wetherbeei_contig11265.1.1|Name=mRNA_P-wetherbeei_contig11265.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=284bp MTSFTDAMAVVAAPSRPPASTVHLTADLQAELRQTRQAIEELVALERNKLback to top mRNA from alignment at P-wetherbeei_contig11265:561..2028+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig11265.1.1 ID=mRNA_P-wetherbeei_contig11265.1.1|Name=mRNA_P-wetherbeei_contig11265.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1468bp|location=Sequence derived from alignment at P-wetherbeei_contig11265:561..2028+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig11265:561..2028+ >mRNA_P-wetherbeei_contig11265.1.1 ID=mRNA_P-wetherbeei_contig11265.1.1|Name=mRNA_P-wetherbeei_contig11265.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=852bp|location=Sequence derived from alignment at P-wetherbeei_contig11265:561..2028+ (Phaeothamnion wetherbeei SAG_119_79)back to top |