mRNA_P-wetherbeei_contig11261.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig11261.2.1
Unique NamemRNA_P-wetherbeei_contig11261.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig11261.2.1 vs. uniprot
Match: A0A7X9AGD7_9BURK (Protein translocase subunit SecY n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X9AGD7_9BURK)

HSP 1 Score: 518 bits (1333), Expect = 7.860e-180
Identity = 257/438 (58.68%), Postives = 340/438 (77.63%), Query Frame = 1
Query:    1 VATSSADALKVPDIRDRISWMFIGFAIFALCVHIPIPGIDRVTWDKL-ASGDLLQFLGMFTGGALTKFSIVALGITPYINASIIMQLMTVVVPSLKEEQKEGGEIGRRRIARITRNLTIGLACLQATMMTISLSKYHGQNGEE-IFLSNSPVFLATVIVTLVAGTCFMLWLGETLTERSLGNGVSLIIFAGIVMSYPKYLMQTFEQAHAGGPKAVIAVIIFFLICLGIIASIIFMTMGVRKVPIQYPKRQVGNKMYGGQNTFLPVKVNNAGVISIIFAVSIMYLPTTLAGFI--PADAVGVAGAYKNIVNLYLNPNNHFYNLLYALCVVFFTFFYSAIAFNVEDIADNLKKAGGFIPGIRPGRPTAEYLERLVTRLNVISGAYLAFLAVAPTYVMRLTNVTSFYLGSTSLLIIVGVALDTMQQIEARLVLRHYQGFMK 1302
            +A + ADALKV D+R R+ W F+G A+F L +HI +PG+++  W+ L A G+L QFLGMFTGGAL  FS+ A+GITPYINASIIMQL+TVV+P LK+ QKEGG+IGRR+I + TR LT+ LA LQA  MT+SL++Y   +    +F  +   F   VI+ +V+GT F++WLG  LTER +GNGVSL+IFAGIV+ +P YL  TF +A   G   V+++IIFF+I + ++A+I+ + +G RKVP+QYPKRQVG K+YGG +T++P++VNNAGV+SIIFA+SIMYLP T A F+  PA            +N   +P   FYNL+YA  V+FFT+FYSAI FN++D+ADN+KK GGFIPGIRPGRPTAEYL+R+++R+ ++S  +LAF+AVAPT++M+LT V +F+LGSTSLLIIVGVALDTMQQIEARLV+RHYQGFMK
Sbjct:    1 MAATFADALKVDDVRKRLGWNFLGLAVFVLTIHISMPGVNKDVWNALLARGELFQFLGMFTGGALNNFSVAAMGITPYINASIIMQLLTVVIPQLKDLQKEGGDIGRRKIGQYTRTLTLILATLQAVFMTLSLARYSASSTTGGVFTMSGIGFYVMVILAMVSGTMFLMWLGGLLTERGIGNGVSLLIFAGIVLRFPNYLQDTFAKAGVQGATYVMSLIIFFIIMILLVAAIVMIHLGQRKVPVQYPKRQVGRKVYGGHSTYIPIRVNNAGVLSIIFAISIMYLPNTFAQFLVEPAQKHPWLLNTLQFINSVFDPRTWFYNLMYAGLVIFFTYFYSAITFNIQDVADNMKKYGGFIPGIRPGRPTAEYLDRVLSRITLVSALFLAFIAVAPTFIMQLTGVNTFFLGSTSLLIIVGVALDTMQQIEARLVMRHYQGFMK 438          
BLAST of mRNA_P-wetherbeei_contig11261.2.1 vs. uniprot
Match: A0A355TRE4_9BACT (Protein translocase subunit SecY n=1 Tax=bacterium UBP9_UBA11836 TaxID=2060920 RepID=A0A355TRE4_9BACT)

HSP 1 Score: 507 bits (1306), Expect = 9.530e-176
Identity = 254/439 (57.86%), Postives = 334/439 (76.08%), Query Frame = 1
Query:    1 VATSSADALKVPDIRDRISWMFIGFAIFALCVHIPIPGIDRVTWDKLAS-GDLLQFLGMFTGGALTKFSIVALGITPYINASIIMQLMTVVVPSLKEEQKEGGEIGRRRIARITRNLTIGLACLQATMMTISLSKYHGQNGEEIFLSNSPVFLATVIVTLVAGTCFMLWLGETLTERSLGNGVSLIIFAGIVMSYPKYLMQTFEQAHAGGPKAVIAVIIFFLICLGIIASIIFMTMGVRKVPIQYPKRQVGNKMYGGQNTFLPVKVNNAGVISIIFAVSIMYLPTTLAGFIP----ADAVGVAGAYKNIVNLYLNPNNHFYNLLYALCVVFFTFFYSAIAFNVEDIADNLKKAGGFIPGIRPGRPTAEYLERLVTRLNVISGAYLAFLAVAPTYVMRLTNVTSFYLGSTSLLIIVGVALDTMQQIEARLVLRHYQGFMK 1302
            +A+S ADALK  D+R R++W+FIG AIF L VHI +PG+++  W+ L + G+L +FLGMFTGGA   FS+ A+GITPYINASIIMQL+TVV+P LK+ QKEGGE GR++I   TR LT+GLA LQA  MT++L++Y G NG  +F      F   V++ LV GT F++WLGE +T++ +GNGVS+IIF GIV+ +P YLM +   A+  G    I+++IFFLI + ++A I+++ +G+RK+PIQY +RQVG KMYGG +++LP++VNNAGVISIIFA+SIMY+P T+A  +     +   GVA    NI  ++  P   FYNL YA  V+FFT+FYSAI FNV D+ADNLKK+GGF+PGIRPGRPTAEYLE++ +R   IS  +LA LAVAPTY+M+LT V +F+LGSTSLLIIVGVALD MQQI+ARL +R YQGFMK
Sbjct:    1 MASSFADALKSDDLRSRVAWVFIGLAIFVLTVHIGMPGVNKDVWNALLNKGELFRFLGMFTGGAFNNFSVAAMGITPYINASIIMQLLTVVLPQLKDLQKEGGEQGRKQIGAYTRQLTLGLAVLQALFMTVALARYSG-NGGGVFTMTGIGFYVMVVIALVTGTMFLMWLGELMTDKGIGNGVSMIIFGGIVLRFPNYLMDSLRVANVQGAAYYISLVIFFLILIALVAGIVYIHLGIRKIPIQYRRRQVGTKMYGGHSSYLPIRVNNAGVISIIFAISIMYMPNTVAQIMNLVWGSSHPGVAAFATNIETIFA-PRGVFYNLCYAALVIFFTYFYSAITFNVNDVADNLKKSGGFVPGIRPGRPTAEYLEKVFSRTTFISAIFLALLAVAPTYIMQLTKVNTFFLGSTSLLIIVGVALDAMQQIQARLTMRKYQGFMK 437          
BLAST of mRNA_P-wetherbeei_contig11261.2.1 vs. uniprot
Match: A0A1V5PP07_9BACT (Protein translocase subunit SecY n=1 Tax=bacterium ADurb.Bin363 TaxID=1866927 RepID=A0A1V5PP07_9BACT)

HSP 1 Score: 465 bits (1196), Expect = 4.330e-159
Identity = 243/433 (56.12%), Postives = 330/433 (76.21%), Query Frame = 1
Query:   22 ALKVPDIRDRISWMFIGFAIFALCVHIPIPGIDRVTWDKLAS-GDLLQFLGMFTGGALTKFSIVALGITPYINASIIMQLMTVVVPSLKEEQKEGGEIGRRRIARITRNLTIGLACLQATMMTISLSKYHGQNGEEIF--LSNS---PVFLATVIVTLVAGTCFMLWLGETLTERSLGNGVSLIIFAGIVMSYPKYLMQTFEQAHAGGPKAVIAVIIFFLICLGIIASIIFMTMGVRKVPIQYPKRQVGNKMYGGQNTFLPVKVNNAGVISIIFAVSIMYLPTTLAGFIPADAVGVAGAYKNIVNLYLNPNNHFYNLLYALCVVFFTFFYSAIAFNVEDIADNLKKAGGFIPGIRPGRPTAEYLERLVTRLNVISGAYLAFLAVAPTYVMRLTNVTSFYLGSTSLLIIVGVALDTMQQIEARLVLRHYQGFMK 1302
            A KVPDIR RI ++F GFA+F   VH+ +PGI+R  W+ L S G+L  FLGMFTGGAL KFSI A+GITPYINASIIMQL+T+VVP L++  KE GE GR++I++ITR LTIGLA LQ+T MT+ L+K+  + G+ IF   +NS    ++ A VIV+L AGT F++WLGE ++++ +GNGVSLIIF GIV+  P  ++ TF+   AG   +++ +I+F ++ LG+I SII +T G R+VP+QY KR VG K+ GGQ+T++P++VNNAGVISIIFA+SI+Y P T+ GF    +   +     ++NL+ +P++ FYNLLY   VVFFT+FY+A+ FN+ DI+DN+KK GGFIPGIRPG  TA+YLE++++RL  +S  +L  +AV PTY++ LT + S+ LGSTSLLI+VGVAL+ MQQIEARLV+RHYQGFMK
Sbjct:    8 AFKVPDIRKRILFVFAGFAVFIFTVHVTVPGINRELWEHLLSRGNLGGFLGMFTGGALNKFSICAMGITPYINASIIMQLLTIVVPQLEKMAKEEGEAGRKKISQITRYLTIGLAFLQSTTMTLGLAKFRTEEGQYIFKAFANSISQGLYYAMVIVSLTAGTAFLMWLGEQMSDKGIGNGVSLIIFIGIVLRLPHNVVDTFKIISAG-ELSMVRLIMFIIVTLGLITSIILITQGQRRVPVQYAKRVVGRKLMGGQSTYIPIRVNNAGVISIIFAISILYFPMTILGFFHEKSA--SPIINWVINLF-HPSSVFYNLLYFGLVVFFTYFYAAVTFNIMDISDNMKKYGGFIPGIRPGPKTAQYLEKILSRLTFVSAIFLGLIAVLPTYILALTKI-SWQLGSTSLLIVVGVALEFMQQIEARLVMRHYQGFMK 435          
BLAST of mRNA_P-wetherbeei_contig11261.2.1 vs. uniprot
Match: A0A2W5XJB4_9BACT (Protein translocase subunit SecY n=1 Tax=Candidatus Eremiobacter sp. RRmetagenome_bin22 TaxID=2599629 RepID=A0A2W5XJB4_9BACT)

HSP 1 Score: 424 bits (1090), Expect = 4.050e-143
Identity = 212/430 (49.30%), Postives = 300/430 (69.77%), Query Frame = 1
Query:   16 ADALKVPDIRDRISWMFIGFAIFALCVHIPIPGIDRVTWDK-LASGDLLQFLGMFTGGALTKFSIVALGITPYINASIIMQLMTVVVPSLKEEQKEGGEIGRRRIARITRNLTIGLACLQATMMTISLSKYHGQNGEEIFLSNSPVFLATVIVTLVAGTCFMLWLGETLTERSLGNGVSLIIFAGIVMSYPKYLMQTFEQAHAGGPKAVIAVIIFFLICLGIIASIIFMTMGVRKVPIQYPKRQVGNKMYGGQNTFLPVKVNNAGVISIIFAVSIMYLPTTLAGFIPADAVGVAGAYKNIVNLYLNPNNHFYNLLYALCVVFFTFFYSAIAFNVEDIADNLKKAGGFIPGIRPGRPTAEYLERLVTRLNVISGAYLAFLAVAPTYVMRLTNVTSFYLGSTSLLIIVGVALDTMQQIEARLVLRHYQGFMK 1302
            A+AL VP+IR+RI ++F  FA+F + V++ +P ++   W   LA G  L FLG  +GGAL +FS++A+GITPYINASIIMQL+TVV P++KE  + GGE GRR +   TR LT+ LA +QAT M ++LS+ H     ++F      +L  V++TL AGT +++WLGE +T++ +GNGVSLIIF GI++ YP Y  QT +    GG   V + +IF LI +  + SIIFM  G R+VP+QY KR +G K+YGG++T++P+++NNAGVISIIFA+SI+  P  ++ +           +   + LY N N+  YN +Y + V+ FTFFYS +  N+ DI D+LKK GGFIPGIRPG+PT +YL++++ R+  ++  YL  LAV P     +T++T+FYLGSTSLLI+VGVALDTM QIEARL +R Y+GF+K
Sbjct:    6 ANALVVPEIRNRILFVFGAFAMFVVMVYVQVPYVNIKAWQNILAGGQFLNFLGFLSGGALQRFSVIAMGITPYINASIIMQLLTVVYPNIKEMMQHGGEQGRRTVGLYTRWLTVALAIIQATTMVVALSRAHVFERTDLF------YLVMVVLTLTAGTVWLMWLGEQMTDKGIGNGVSLIIFVGIILRYPVYFSQTLQLGEKGGLN-VFSFVIFLLIAIISLISIIFMYQGTRRVPVQYAKRVIGRKVYGGRSTYIPLRLNNAGVISIIFAISILLFPQQISSWAQQSGAQWLHGFSQFMALYFNYNSLLYNFVYFVLVIGFTFFYSEVVVNIMDIGDSLKKQGGFIPGIRPGKPTTDYLQKILHRITAVAAVYLGLLAVLPNITQSMTHITTFYLGSTSLLIVVGVALDTMTQIEARLAMRDYRGFIK 428          
BLAST of mRNA_P-wetherbeei_contig11261.2.1 vs. uniprot
Match: A0A2M7AKH6_9BACT (Protein translocase subunit SecY n=1 Tax=Armatimonadetes bacterium CG07_land_8_20_14_0_80_40_9 TaxID=1973916 RepID=A0A2M7AKH6_9BACT)

HSP 1 Score: 417 bits (1073), Expect = 1.120e-140
Identity = 217/428 (50.70%), Postives = 304/428 (71.03%), Query Frame = 1
Query:   22 ALKVPDIRDRISWMFIGFAIFALCVHIPIPGIDRVTWDKL-ASGDLLQFLGMFTGGALTKFSIVALGITPYINASIIMQLMTVVVPSLKEEQKEGGEIGRRRIARITRNLTIGLACLQATMMTISLSKYHGQNGEEIFLSNSPVFLATVIVTLVAGTCFMLWLGETLTERSLGNGVSLIIFAGIVMSYPKYLMQTFEQAHAGGPKAVIAVIIFFLICLGIIASIIFMTMGVRKVPIQYPKRQVGNKMYGGQNTFLPVKVNNAGVISIIFAVSIMYLPTTLAGFIPADAVGVAGAYKNIVNLYLNPNNHFYNLLYALCVVFFTFFYSAIAFNVEDIADNLKKAGGFIPGIRPGRPTAEYLERLVTRLNVISGAYLAFLAVAPTYVMRLTNVTSFYLGSTSLLIIVGVALDTMQQIEARLVLRHYQGFMK 1302
            A KVPD+R RI ++F  F++F   +H+ +PGIDR     L   G LL  L +FTGGAL KFSI+A+GITPYINASIIMQL+TVV+P +++ QKEG E GR+ I+R TR LTI LA +QA  MTI L          +      V    +I+TL AGT F++WLGE +T++ +GNGVSLIIF GIV   P  + QT     +GG   +  V+   +I + I+A I+++    R+V +QY KR VG K+YGGQ+T+LP+KVN AGVI IIFA+SI+  P T+A F+P  A+      + + + + N  + +YNL YAL V+FFT+FY+A+ FN  ++ADN+KK GGF+PGIRPG+PT+EYL+R++TR+ ++   +LAF+AV P+Y++ LT++ +FYLG TSLLI+VGVALDT+QQIEA++++RHY+GF+K
Sbjct:    8 AFKVPDLRKRIFFVFGAFSVFIFGLHVYVPGIDREAMAHLFEQGGLLGLLDVFTGGALRKFSILAMGITPYINASIIMQLLTVVIPQIEQLQKEG-ESGRKVISRYTRYLTIALALVQAVGMTIWLK------NAGVITQLDVVHFLRIIITLTAGTAFLMWLGEQITDKGIGNGVSLIIFVGIVARMPTQVAQTISLYQSGG-IGISNVLSLMIIAVAIVAGIVYVQQAERRVSVQYTKRIVGRKVYGGQSTYLPLKVNQAGVIPIIFAISILLFPATIAQFVPVPAI------RQLASSF-NETSWYYNLSYALLVIFFTYFYTAVTFNPVEVADNMKKYGGFVPGIRPGKPTSEYLDRILTRITLLGALFLAFIAVIPSYIISLTHIGTFYLGGTSLLIVVGVALDTVQQIEAQMLMRHYEGFIK 420          
BLAST of mRNA_P-wetherbeei_contig11261.2.1 vs. uniprot
Match: A0A2W5YLY0_9BACT (Protein translocase subunit SecY n=1 Tax=Candidatus Eremiobacteraeota bacterium TaxID=2052317 RepID=A0A2W5YLY0_9BACT)

HSP 1 Score: 417 bits (1073), Expect = 1.570e-140
Identity = 225/429 (52.45%), Postives = 295/429 (68.76%), Query Frame = 1
Query:   22 ALKVPDIRDRISWMFIGFAIFALCVHIPIPGIDRVTWDK-LASGDLLQFLGMFTGGALTKFSIVALGITPYINASIIMQLMTVVVPSLKEEQKEGGEIGRRRIARITRNLTIGLACLQATMMTISLSKYHGQNGEEIFLSNSPVFLATVIVTLVAGTCFMLWLGETLTERSLGNGVSLIIFAGIVMSYPKYLMQTFEQAHAGGPKAVIAVIIFFLICLGIIASIIFMTMGVRKVPIQYPKRQVGNKMYGGQNTFLPVKVNNAGVISIIFAVSIMYLPT-TLAGFIPADAVGVAGAYKNIVNLYLNPNNHFYNLLYALCVVFFTFFYSAIAFNVEDIADNLKKAGGFIPGIRPGRPTAEYLERLVTRLNVISGAYLAFLAVAPTYVMRLTNVTSFYLGSTSLLIIVGVALDTMQQIEARLVLRHYQGFMK 1302
            AL VPDIR RI ++F  FA+F   VHI +P ++   W + L SG    FLG  +GGAL K SI+A+GITPYINASIIMQLMTVV+P L+E  K+GGE GR++I++ TR LTI LA +Q+  MT    ++  Q G  +F  +S  F    ++  VAGT F++WLGE +T+R +GNG+SLIIF GIV+ +P  +  T   A AGG   +  +++F LI L  I SIIF+  G R+VP+Q  +R VG KM+ G++T++P+++NNAGVISIIFA+S++ LP   L+ F      G AG     +  Y +PN   YN++Y L VV FTFFYSAI  N  DIADNLKK+G FIPGIRPG+PT EY+ R++ R+   +  YL  LAV PT + R   VT+FYLGSTSLLI+VGVALDTM QIEARL +R Y+GFMK
Sbjct:    8 ALLVPDIRQRIGFVFGAFAVFVFMVHIQLPNVNEQAWQQQLQSGTFFNFLGFLSGGALQKLSIIAMGITPYINASIIMQLMTVVLPQLEEMAKKGGEEGRKKISQYTRWLTIILATVQSFFMT----RFMSQAG--VFYDHSLAFQLFAVLMFVAGTMFLMWLGEQITDRGIGNGISLIIFIGIVLRFPTQIANTVSSA-AGGGINIFNLVMFILIALVTIVSIIFLYQGQRRVPVQQARRVVGRKMFAGRSTYIPLRLNNAGVISIIFAISLLLLPQQALSWFGRGTQSGFAGNISAFLTAYFSPNEWLYNVVYFLLVVVFTFFYSAIVVNTRDIADNLKKSGSFIPGIRPGQPTVEYINRILLRITTAAAIYLGLLAVLPTTLERGLGVTTFYLGSTSLLIVVGVALDTMTQIEARLAMRDYRGFMK 429          
BLAST of mRNA_P-wetherbeei_contig11261.2.1 vs. uniprot
Match: A0A522MZA3_9BACT (Protein translocase subunit SecY n=3 Tax=bacterium TaxID=1869227 RepID=A0A522MZA3_9BACT)

HSP 1 Score: 405 bits (1040), Expect = 1.490e-135
Identity = 208/428 (48.60%), Postives = 288/428 (67.29%), Query Frame = 1
Query:   22 ALKVPDIRDRISWMFIGFAIFALCVHIPIPGIDRVTWDK-LASGDLLQFLGMFTGGALTKFSIVALGITPYINASIIMQLMTVVVPSLKEEQKEGGEIGRRRIARITRNLTIGLACLQATMMTISLSKYHGQNGEEIFLSNSPVFLATVIVTLVAGTCFMLWLGETLTERSLGNGVSLIIFAGIVMSYPKYLMQTFEQAHAGGPKAVIAVIIFFLICLGIIASIIFMTMGVRKVPIQYPKRQVGNKMYGGQNTFLPVKVNNAGVISIIFAVSIMYLPTTLAGFIPADAVGVAGAYKNIVNLYLNPNNHFYNLLYALCVVFFTFFYSAIAFNVEDIADNLKKAGGFIPGIRPGRPTAEYLERLVTRLNVISGAYLAFLAVAPTYVMRLTNVTSFYLGSTSLLIIVGVALDTMQQIEARLVLRHYQGFMK 1302
            A  VP+IR R+ ++F+ FAIF   +H+ IP ++   W + +  G    FLG  +GGAL + S++A+GITPYINASIIMQLMT+V+P L+E  K GGE GR++I   TR LTIGLA +QAT MTI++          +F      F   VI  + +GT F++WLGE ++++ +GNGVSLIIF GI++ YPKY   T +    GG   V+ ++I+ LI L  I SIIFM  G R+VP+Q  KR VG KM+ G+++++P+++NNAGVISIIFA+SI+ LP     +      G        +  +  PN+  YN+ Y + VV FT+FY+ +    +DIADNLKK+G FIPGIRPG+PT ++L+R++ RL  +S  YL  LAV P+ V + T VT+FYLG+TSLLI+VGVALDTM QIEARL +R Y+GF+K
Sbjct:    8 AFIVPEIRKRLGFVFLSFAIFIFMIHVQIPNVNLAAWQRAIQGGTFYNFLGFLSGGALQELSVIAMGITPYINASIIMQLMTIVLPQLEELAKHGGEEGRKQINYYTRWLTIGLALVQATTMTIAM------RNMGVFYDRGWAFSLFVIAAMTSGTMFLMWLGEQMSDKGIGNGVSLIIFEGIILRYPKYFSDTVKLGTGGGLN-VLGLVIYLLIALITIVSIIFMYQGQRRVPVQQAKRVVGRKMFAGRSSYIPLRLNNAGVISIIFAISILLLPQQALSWFQRGTTGPGANIGLFLQTWFGPNSVLYNVAYFVLVVVFTYFYANVVVQTKDIADNLKKSGSFIPGIRPGQPTKDFLDRIMLRLTTVSAVYLGLLAVLPSVVQQGTGVTTFYLGATSLLIVVGVALDTMTQIEARLAMRDYRGFIK 428          
BLAST of mRNA_P-wetherbeei_contig11261.2.1 vs. uniprot
Match: A0A7Y3NXR8_9BACT (Protein translocase subunit SecY n=4 Tax=root TaxID=1 RepID=A0A7Y3NXR8_9BACT)

HSP 1 Score: 398 bits (1023), Expect = 1.040e-132
Identity = 207/448 (46.21%), Postives = 293/448 (65.40%), Query Frame = 1
Query:   22 ALKVPDIRDRISWMFIGFAIFALCVHIPIPGIDRVTWDK-LASGDLLQFLGMFTGGALTKFSIVALGITPYINASIIMQLMTVVVPSLKEEQKEGGEIGRRRIARITRNLTIGLACLQATMMTISLSKYHGQNGEEIFLSNSPVFLATVIVTLVAGTCFMLWLGETLTERSLGNGVSLIIFAGIVMSYPKYLMQTFEQAHAGGPKAVIAVIIFFLICLGIIASIIFMTMGVRKVPIQYPKRQVGNKMYGGQNTFLPVKVNNAGVISIIFAVSIMYLPTTLAGFIPADAVGV--------------------AGAYKNIVNLYLNPNNHFYNLLYALCVVFFTFFYSAIAFNVEDIADNLKKAGGFIPGIRPGRPTAEYLERLVTRLNVISGAYLAFLAVAPTYVMRLTNVTSFYLGSTSLLIIVGVALDTMQQIEARLVLRHYQGFMK 1302
            AL VPDIR R+ ++   F  F   +H+ +P ++   W   L SG     LG  +GGAL K S++A+GITPYINASIIMQLMTVV+P L+E QK+GG+ GR+RI +ITR LTI LA LQAT M+IS+          +F   S V+L   I  +VAGT F++WLGE +T++ +GNG+SLIIF GIV+ YP Y+ QT+  A  G    +  +++F ++ +  I  I+F+  G R+VP+Q  +R VG KM+ G++T++P+++NNAGVISIIFA+SI+ LP     +     +G+                      A+  + N++  P++  YN++Y L VV FTFFYS++  N  DIADNLKK+G FIPGIRPG+PT +YL +++ R+   +  +L  LAV P  +    ++T+FYLGSTSLLI+VGVALDT+ QIEARL +R Y+GF+K
Sbjct:    8 ALLVPDIRKRVGYVLFAFTWFVFMIHVQLPNVNEQAWQHVLQSGAFYNLLGFLSGGALQKLSVIAMGITPYINASIIMQLMTVVLPQLEELQKKGGDEGRKRIGQITRWLTIALATLQATFMSISM------RNSGVFYDTSLVYLLFAITIMVAGTMFLMWLGEQITDKGIGNGISLIIFIGIVLRYPTYIAQTYASASQGATN-IGNLVLFLIVTILAIIGIVFLYQGQRRVPVQQARRTVGRKMFAGRSTYIPLRLNNAGVISIIFAISILLLPQQALSWF-THGIGIQPVYFTILHLGKFLLEFPLNGAAWSEVFNVWFAPSSWSYNIVYFLLVVIFTFFYSSVVLNTADIADNLKKSGSFIPGIRPGQPTVDYLNKVLLRITTAAAIFLGVLAVLPGALQHGLSITTFYLGSTSLLIVVGVALDTITQIEARLAMRDYRGFIK 447          
BLAST of mRNA_P-wetherbeei_contig11261.2.1 vs. uniprot
Match: A0A7X8U5N2_9FIRM (Protein translocase subunit SecY n=1 Tax=Syntrophomonadaceae bacterium TaxID=2093811 RepID=A0A7X8U5N2_9FIRM)

HSP 1 Score: 395 bits (1014), Expect = 1.150e-131
Identity = 203/431 (47.10%), Postives = 293/431 (67.98%), Query Frame = 1
Query:   10 SSADALKVPDIRDRISWMFIGFAIFALCVHIPIPGIDRVTWDKLASGDLLQFLGMFTGGALTKFSIVALGITPYINASIIMQLMTVVVPSLKEEQKEGGEIGRRRIARITRNLTIGLACLQATMMTISLSKYHGQNGEEIFLSNSPVFLATVIVTLVAGTCFMLWLGETLTERSLGNGVSLIIFAGIVMSYPKYLMQTFEQAHAGGPKAVIAVIIFFLICLGIIASIIFMTMGVRKVPIQYPKRQVGNKMYGGQNTFLPVKVNNAGVISIIFAVSIMYLPTTLAGFIPADAVGVAGAYKNIVNLYLNPNNHFYNLLYALCVVFFTFFYSAIAFNVEDIADNLKKAGGFIPGIRPGRPTAEYLERLVTRLNVISGAYLAFLAVAPTYVMRLTNVTSFYLGSTSLLIIVGVALDTMQQIEARLVLRHYQGFMK 1302
            S   A K  D+++++ +  + FA+F L VHIP+PGI+     +L     L F  + +GGA   FS+ A+ ITPYIN+SIIMQL+TV+VP L++ +KEG E GR++IA+ TR  T+ L  +QA  ++I+LS+Y G   + +  +   +    + + L AGT  ++W+GE +TE+ +GNG+SLIIFAGIV   P  +   FE   AG       V++F +I L +IA+++ +  G R++P+QY KR VG K+YGGQ+TFLP+KVN AGVI IIFA+SIM LP T+  +I    +       N +N Y +  +  YN LY L +VFFT+FY+A+ FN  D+ADN+KK GGF+PGIRPGRPTAEY+ R+++RL +  G + AF+A+ P +V+ LT +TS + G T+LLI+VGVALDTM+QIEA L+LR Y+GF+K
Sbjct:    4 SLQQAFKAGDLKNKVLFTLLMFAVFRLGVHIPVPGINPDAMSELLKNQFLGFFDVISGGAFKNFSVFAMSITPYINSSIIMQLLTVIVPKLEQLKKEGEE-GRKKIAQYTRYGTVVLGFVQAIGISIALSRYSGAGSQVVVENPGIISYLFIAIILTAGTALLMWIGELITEKGIGNGISLIIFAGIVARIPSGIGSVFEYLRAGTANY-FNVLLFIVIALVMIAAVVALNEGQRRLPVQYAKRVVGRKVYGGQSTFLPLKVNTAGVIPIIFAMSIMMLPGTIGPWIQNATI------NNFLNNYFHFGSVLYNSLYVLLIVFFTYFYTAVVFNPVDVADNIKKYGGFVPGIRPGRPTAEYINRVLSRLTLAGGVFYAFVAIMPNFVIALTGLTSIWFGGTALLIVVGVALDTMKQIEAHLLLRSYEGFVK 426          
BLAST of mRNA_P-wetherbeei_contig11261.2.1 vs. uniprot
Match: A0A2N6AK29_9FIRM (Protein translocase subunit SecY n=1 Tax=Clostridiales bacterium TaxID=1898207 RepID=A0A2N6AK29_9FIRM)

HSP 1 Score: 393 bits (1009), Expect = 6.160e-131
Identity = 210/434 (48.39%), Postives = 296/434 (68.20%), Query Frame = 1
Query:   19 DALKVPDIRDRISWMFIGFAIFALCVHIPIPGIDRVTWDKL--ASGDLLQFLGMFTGGALTKFSIVALGITPYINASIIMQLMTVVVPSLKEEQKEGGEIGRRRIARITRNLTIGLACLQATMMTISLSKYHGQNGEEIFLSNSPVFLATVIVTLVAGTCFMLWLGETLTERSLGNGVSLIIFAGIVMSYPKYLMQTFEQAHAGGPKAVIAVIIFFLICLGIIASIIFMTMGVRKVPIQYPKRQVGNKMYGGQNTFLPVKVNNAGVISIIFAVSIMYLPTTLAGFIPADAVGVAGAYKNIVNLYLNPNN----HFYNLLYALCVVFFTFFYSAIAFNVEDIADNLKKAGGFIPGIRPGRPTAEYLERLVTRLNVISGAYLAFLAVAPTYVMRLTNVTSFYLGSTSLLIIVGVALDTMQQIEARLVLRHYQGFMK 1302
            +A K+PD++ RI +  + FAIF L   IP+PGIDR   ++   + G LL F    +GGA   F+I AL ITPYI +SIIMQL+T+ +P L+   KEG E GR++IA+ TR  T+ LA +QAT ++I L +          +S     +ATVI+TL AGT F++WLGE +TE  +GNG+SLIIFAGI+   P  + QTF++  AG   +V+ ++IF ++ L +IA +I +  G RK+P+QY KR VG KMYGGQ+T +P+KVN AGVI +IFA+S++  P TL  F P       G + N V  YL+P      +FYNLLYAL ++FFT+FY+AI FN  ++ADN+KK GGFIPGIRPG+ TAEYL++ + ++ +    +LA +AV PT ++  T++  F  G T+LLI VGV+L+TM+QIEA++V+RHYQGF+K
Sbjct:    7 NAWKIPDLKKRILFTLMMFAIFRLGTSIPVPGIDREILNQFFASDGGLLNFFNFMSGGAFKNFTIFALSITPYITSSIIMQLLTIAIPKLEALAKEGEE-GRKKIAQFTRYGTVVLAVIQATGISIGLFR-------RALISTDFWAVATVIITLTAGTAFLMWLGEQITENGIGNGISLIIFAGIISRVPLGISQTFQKVSAG-EMSVLPLLIFAVLALFVIAGVIAIQQGTRKIPVQYAKRVVGRKMYGGQSTHIPLKVNQAGVIPVIFAISLLQFPMTLTYFFPD------GGFANFVAKYLSPTGSPGIYFYNLLYALLIIFFTYFYTAITFNPVEVADNMKKNGGFIPGIRPGKKTAEYLQKSLNKITLAGAFFLAMIAVLPTLILNFTSI-DFRFGGTALLIAVGVSLETMKQIEAQMVMRHYQGFLK 424          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11261.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X9AGD7_9BURK7.860e-18058.68Protein translocase subunit SecY n=1 Tax=Burkholde... [more]
A0A355TRE4_9BACT9.530e-17657.86Protein translocase subunit SecY n=1 Tax=bacterium... [more]
A0A1V5PP07_9BACT4.330e-15956.12Protein translocase subunit SecY n=1 Tax=bacterium... [more]
A0A2W5XJB4_9BACT4.050e-14349.30Protein translocase subunit SecY n=1 Tax=Candidatu... [more]
A0A2M7AKH6_9BACT1.120e-14050.70Protein translocase subunit SecY n=1 Tax=Armatimon... [more]
A0A2W5YLY0_9BACT1.570e-14052.45Protein translocase subunit SecY n=1 Tax=Candidatu... [more]
A0A522MZA3_9BACT1.490e-13548.60Protein translocase subunit SecY n=3 Tax=bacterium... [more]
A0A7Y3NXR8_9BACT1.040e-13246.21Protein translocase subunit SecY n=4 Tax=root TaxI... [more]
A0A7X8U5N2_9FIRM1.150e-13147.10Protein translocase subunit SecY n=1 Tax=Syntropho... [more]
A0A2N6AK29_9FIRM6.160e-13148.39Protein translocase subunit SecY n=1 Tax=Clostridi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11261contigP-wetherbeei_contig11261:405..1709 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog498761.HM1_1398
Preferred namesecY
PFAMsSecY
Model size1305
Max annot lvl186801|Clostridia
KEGG koko:K03076
KEGG TC3.A.5
KEGG Pathwayko02024,ko03060,ko03070,map02024,map03060,map03070
KEGG ModuleM00335
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.84e-126
EggNOG OGsCOG0201@1|root,COG0201@2|Bacteria,1TPHB@1239|Firmicutes,248T9@186801|Clostridia
DescriptionThe central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
Cds size1305
COG categoryU
BRITEko00000,ko00001,ko00002,ko02044
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185904.63662-CDS-P-wetherbeei_contig11261:404..17091683185904.63662-CDS-P-wetherbeei_contig11261:404..1709Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11261 405..1709 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11261.2.1prot_P-wetherbeei_contig11261.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig11261 405..1709 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig11261.2.1

>prot_P-wetherbeei_contig11261.2.1 ID=prot_P-wetherbeei_contig11261.2.1|Name=mRNA_P-wetherbeei_contig11261.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=435bp
VATSSADALKVPDIRDRISWMFIGFAIFALCVHIPIPGIDRVTWDKLASG
DLLQFLGMFTGGALTKFSIVALGITPYINASIIMQLMTVVVPSLKEEQKE
GGEIGRRRIARITRNLTIGLACLQATMMTISLSKYHGQNGEEIFLSNSPV
FLATVIVTLVAGTCFMLWLGETLTERSLGNGVSLIIFAGIVMSYPKYLMQ
TFEQAHAGGPKAVIAVIIFFLICLGIIASIIFMTMGVRKVPIQYPKRQVG
NKMYGGQNTFLPVKVNNAGVISIIFAVSIMYLPTTLAGFIPADAVGVAGA
YKNIVNLYLNPNNHFYNLLYALCVVFFTFFYSAIAFNVEDIADNLKKAGG
FIPGIRPGRPTAEYLERLVTRLNVISGAYLAFLAVAPTYVMRLTNVTSFY
LGSTSLLIIVGVALDTMQQIEARLVLRHYQGFMK*
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mRNA from alignment at P-wetherbeei_contig11261:405..1709+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig11261.2.1 ID=mRNA_P-wetherbeei_contig11261.2.1|Name=mRNA_P-wetherbeei_contig11261.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1305bp|location=Sequence derived from alignment at P-wetherbeei_contig11261:405..1709+ (Phaeothamnion wetherbeei SAG_119_79)
GTGGCTACATCCAGCGCCGACGCCCTGAAAGTTCCGGATATTCGAGATCG AATTTCCTGGATGTTTATAGGGTTCGCCATCTTTGCTCTTTGCGTTCATA TTCCGATCCCCGGGATCGATCGTGTGACGTGGGATAAGCTCGCGTCCGGA GACTTGCTTCAGTTCTTGGGCATGTTTACGGGTGGAGCTTTGACCAAGTT CTCGATTGTGGCATTAGGGATTACGCCCTACATCAATGCGTCGATTATCA TGCAATTGATGACGGTCGTGGTGCCGAGCCTCAAAGAGGAGCAAAAAGAG GGCGGCGAAATCGGTCGGCGCCGGATAGCCCGGATTACCCGAAACTTGAC GATCGGTCTCGCTTGCCTGCAGGCGACGATGATGACGATTTCGCTGAGCA AGTATCACGGTCAGAATGGCGAGGAAATTTTCCTCTCCAATAGCCCGGTT TTCCTTGCGACCGTAATTGTAACCCTGGTCGCCGGCACCTGTTTCATGCT CTGGCTGGGTGAGACGCTCACGGAGCGCTCGTTGGGTAACGGCGTATCGC TCATCATCTTCGCCGGTATCGTTATGTCCTATCCCAAGTATCTGATGCAG ACGTTCGAGCAGGCCCACGCTGGCGGCCCGAAGGCAGTTATCGCCGTCAT AATCTTCTTCCTGATTTGTCTGGGAATCATCGCCTCGATCATCTTTATGA CGATGGGCGTGCGCAAGGTGCCAATTCAGTATCCCAAGCGCCAGGTTGGC AACAAGATGTATGGCGGTCAGAACACATTCTTACCCGTGAAGGTCAATAA TGCGGGCGTGATTTCGATCATCTTCGCTGTATCGATTATGTATCTACCCA CGACGCTCGCAGGTTTCATCCCGGCTGATGCTGTCGGGGTTGCTGGTGCC TACAAAAATATTGTCAATCTATATTTGAATCCCAACAATCATTTCTACAA TCTGCTTTACGCTCTGTGCGTAGTATTCTTCACTTTCTTCTACTCGGCCA TCGCCTTCAACGTCGAAGATATCGCCGACAATTTGAAGAAAGCTGGCGGT TTCATCCCGGGTATTCGTCCCGGCCGTCCGACTGCCGAGTATCTCGAACG CCTGGTTACCCGACTCAACGTCATATCGGGTGCTTATCTGGCCTTCCTGG CCGTGGCTCCGACCTATGTTATGCGTCTAACCAATGTCACAAGTTTCTAC CTCGGTTCTACGTCTCTGCTGATCATCGTGGGCGTTGCGCTCGATACGAT GCAGCAGATCGAGGCTCGCCTCGTACTGCGTCACTACCAGGGCTTCATGA AATAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig11261:405..1709+

>mRNA_P-wetherbeei_contig11261.2.1 ID=mRNA_P-wetherbeei_contig11261.2.1|Name=mRNA_P-wetherbeei_contig11261.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1305bp|location=Sequence derived from alignment at P-wetherbeei_contig11261:405..1709+ (Phaeothamnion wetherbeei SAG_119_79)
GTGGCTACATCCAGCGCCGACGCCCTGAAAGTTCCGGATATTCGAGATCG
AATTTCCTGGATGTTTATAGGGTTCGCCATCTTTGCTCTTTGCGTTCATA
TTCCGATCCCCGGGATCGATCGTGTGACGTGGGATAAGCTCGCGTCCGGA
GACTTGCTTCAGTTCTTGGGCATGTTTACGGGTGGAGCTTTGACCAAGTT
CTCGATTGTGGCATTAGGGATTACGCCCTACATCAATGCGTCGATTATCA
TGCAATTGATGACGGTCGTGGTGCCGAGCCTCAAAGAGGAGCAAAAAGAG
GGCGGCGAAATCGGTCGGCGCCGGATAGCCCGGATTACCCGAAACTTGAC
GATCGGTCTCGCTTGCCTGCAGGCGACGATGATGACGATTTCGCTGAGCA
AGTATCACGGTCAGAATGGCGAGGAAATTTTCCTCTCCAATAGCCCGGTT
TTCCTTGCGACCGTAATTGTAACCCTGGTCGCCGGCACCTGTTTCATGCT
CTGGCTGGGTGAGACGCTCACGGAGCGCTCGTTGGGTAACGGCGTATCGC
TCATCATCTTCGCCGGTATCGTTATGTCCTATCCCAAGTATCTGATGCAG
ACGTTCGAGCAGGCCCACGCTGGCGGCCCGAAGGCAGTTATCGCCGTCAT
AATCTTCTTCCTGATTTGTCTGGGAATCATCGCCTCGATCATCTTTATGA
CGATGGGCGTGCGCAAGGTGCCAATTCAGTATCCCAAGCGCCAGGTTGGC
AACAAGATGTATGGCGGTCAGAACACATTCTTACCCGTGAAGGTCAATAA
TGCGGGCGTGATTTCGATCATCTTCGCTGTATCGATTATGTATCTACCCA
CGACGCTCGCAGGTTTCATCCCGGCTGATGCTGTCGGGGTTGCTGGTGCC
TACAAAAATATTGTCAATCTATATTTGAATCCCAACAATCATTTCTACAA
TCTGCTTTACGCTCTGTGCGTAGTATTCTTCACTTTCTTCTACTCGGCCA
TCGCCTTCAACGTCGAAGATATCGCCGACAATTTGAAGAAAGCTGGCGGT
TTCATCCCGGGTATTCGTCCCGGCCGTCCGACTGCCGAGTATCTCGAACG
CCTGGTTACCCGACTCAACGTCATATCGGGTGCTTATCTGGCCTTCCTGG
CCGTGGCTCCGACCTATGTTATGCGTCTAACCAATGTCACAAGTTTCTAC
CTCGGTTCTACGTCTCTGCTGATCATCGTGGGCGTTGCGCTCGATACGAT
GCAGCAGATCGAGGCTCGCCTCGTACTGCGTCACTACCAGGGCTTCATGA
AATAG
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