mRNA_P-wetherbeei_contig1126.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1126.2.1 vs. uniprot
Match: A0A835ZFA2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFA2_9STRA) HSP 1 Score: 178 bits (452), Expect = 2.220e-48 Identity = 105/199 (52.76%), Postives = 133/199 (66.83%), Query Frame = 3
Query: 12 RSSSSFGWYDGGTAEDETHDSAFRQIDDWREIARQSAAPAATAEEEAATA---------ALEGAMTVVELRHENVTTTKTWQI-KGRPVPYAVAIGAIRVLKKGGAQHAQYQVVLSTNSRIWRCWKRFSDFKLLAEYARLSGLQHSIVAWTEVQSKQRLFRCLEEAYLRSKCLVLERFMAQLLFELPSPSLLLTFVQAP 578
RS SSFG+++ + E S+F QIDDWREI + A P++ +T+ A E E +E T+T+Q G+ VPYAVAI A RV+ GG HAQYQVV+ST +++W+CWKRFSDFKLLAEYA++S L ++ AW E+QS QR FRCLE YLR+KC LE+F+ LLFELPSPSLLLTFVQAP
Sbjct: 34 RSQSSFGFFEDVALDGEDQLSSFIQIDDWREINWKMAQPSSDDAAAGSTSSALPPSPRSASEQESVQFEYINELTVATRTFQSPNGQSVPYAVAIRAFRVISSGGG-HAQYQVVVSTQTKVWKCWKRFSDFKLLAEYAKISDLTQTVQAWGEIQSTQRWFRCLEANYLRTKCYYLEKFIGCLLFELPSPSLLLTFVQAP 231
BLAST of mRNA_P-wetherbeei_contig1126.2.1 vs. uniprot
Match: D7FHG1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHG1_ECTSI) HSP 1 Score: 147 bits (372), Expect = 3.340e-36 Identity = 92/195 (47.18%), Postives = 128/195 (65.64%), Query Frame = 3
Query: 12 RSSSSFGWYDGGTAEDETHDS----AFRQIDDWREIARQSAAPAATAEEEAATAALEGAMTVVELRHENVTTTKTWQ--IKGRPVPYAVAIGAIRVLKKGG-AQHAQYQVVLSTNSRIWRCWKRFSDFKLLAEYARLSGLQHSIVAWTEVQSKQRLFRCLEEAYLRSKCLVLERFMAQLLFELPSPSLLLTFVQA 575
RS+SSFGWY+ TA E+ D+ AF Q+ DWR + +EEAAT + + VTTTKT++ + +P PYAV+IG+ RV + A HA+YQV++ST ++ + WKR+SDFKLLAEYA++S L+ ++ AW +Q QR FRCLE YL++KC +LERF+AQ LFE+P+PSLL+ FV A
Sbjct: 120 RSTSSFGWYE-ETAAFESMDAPQSKAFCQVSDWRNLETWDGGRHEP-QEEAATVEF-------VVPNAQVTTTKTFRQGMGQQPEPYAVSIGSTRVRRLSPFAVHAEYQVLVSTKDQVHKSWKRYSDFKLLAEYAKISDLRDTVKAWAHIQQTQRWFRCLEANYLKTKCSLLERFLAQFLFEVPTPSLLMNFVGA 305
BLAST of mRNA_P-wetherbeei_contig1126.2.1 vs. uniprot
Match: A0A835YXN3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXN3_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 1.330e-10 Identity = 35/107 (32.71%), Postives = 60/107 (56.07%), Query Frame = 3
Query: 252 YAVAIGAIRVLK-KGGAQHAQYQVVLSTNSRIWRCWKRFSDFKLLAEYARLSGLQHSIVAWTEVQSKQRLFRCLEEAYLRSKCLVLERFMAQLLFELPSPSLLLTFV 569
+A IG R+++ G++HA++QV+ W W R+++F+ + W +V++ Q +RCL YLR KCL+LE +++Q+LF+ P + LL FV
Sbjct: 103 FAWGIGGFRIVRGSAGSRHAEFQVLARYGDTSWAAWIRWTEFEQKLAEGPAKHWHRAACCWCDVKANQPWYRCLNTEYLRRKCLLLEGYLSQVLFDAPEVNQLLEFV 209
BLAST of mRNA_P-wetherbeei_contig1126.2.1 vs. uniprot
Match: A0A835Z6B4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6B4_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 1.390e-10 Identity = 42/108 (38.89%), Postives = 59/108 (54.63%), Query Frame = 3
Query: 252 YAVAIGAIRVLK-KGGAQHAQYQVVLSTNSRIWRCWKRFSDFKLLAEYA-RLSGLQHSIVAWTEVQSKQRLFRCLEEAYLRSKCLVLERFMAQLLFELPSPSLLLTFV 569
+A IG R+++ G++HA+YQV+ S R W W R S F A+ G S AW ++Q+ QRLFRCL+ YL +KC +LE F+ LF+ LL V
Sbjct: 68 FAWGIGGFRIVRIASGSKHAEYQVLASYGDRTWTRWIRSSAFGRFAKACCEQRGWAASTKAWKQIQTTQRLFRCLDVNYLLNKCHMLENFLRLALFDAGDAQPLLELV 175
BLAST of mRNA_P-wetherbeei_contig1126.2.1 vs. uniprot
Match: D7G5E1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5E1_ECTSI) HSP 1 Score: 73.6 bits (179), Expect = 3.060e-10 Identity = 43/118 (36.44%), Postives = 64/118 (54.24%), Query Frame = 3
Query: 222 TWQIKGRP--VPYAVAIGAIRVLKKGGAQHAQYQVVLSTNSRIWRCWKRFSDFKLLAEYARLSGLQHSIVAWTEVQSKQRLFRCLEEAYLRSKCLVLERFMAQLLFELPSPSLLLTFV 569
++ + G P + + + I RV+ HA+Y+V L R W W+RFS FK +A A G + AW V + +RCL YL KC +LE F+ Q+LF +P+P+LL+ FV
Sbjct: 281 SYHVVGTPASMTFTMHIAGYRVVSTILGMHAEYEVRLKGAGRRWSKWQRFSKFKTIA--ACTQGDPDAAAAWRRVVRAKPHYRCLNPDYLAHKCNLLETFLQQVLFAMPTPALLIHFV 396
BLAST of mRNA_P-wetherbeei_contig1126.2.1 vs. uniprot
Match: A0A024GGF3_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GGF3_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 1.390e-9 Identity = 36/110 (32.73%), Postives = 66/110 (60.00%), Query Frame = 3
Query: 246 VPYAVAIGAIRVL--KKGGAQHAQYQVVLSTNSRIWRCWKRFSDFKLLAEYARLSGLQHSIVAWTEVQSKQRLFRCLEEAYLRSKCLVLERFMAQLLFELPSPSLLLTFV 569
+P +++I R++ + G +HAQY + L ++ + W+R+S+F L + + Q S+ AW +++ R F LE +YL KC+ LE F+ +L++EL PS+L+ F+
Sbjct: 201 IPSSISIPRFRIVQPRHGNDRHAQYLITLRLDNEHYANWRRYSEFSELVKVLQGQRYQRSLKAWKSIET--RWFNRLETSYLHQKCIGLENFVRELMYELHEPSMLIRFL 308
BLAST of mRNA_P-wetherbeei_contig1126.2.1 vs. uniprot
Match: A0A2D4BLA8_PYTIN (Phox domain-containing protein, partial n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BLA8_PYTIN) HSP 1 Score: 72.4 bits (176), Expect = 1.490e-9 Identity = 40/114 (35.09%), Postives = 63/114 (55.26%), Query Frame = 3
Query: 234 KGRPVPYAVAIGAIRVL--KKGGAQHAQYQVVLSTNSRIWRCWKRFSDFKLLAEYARLSGLQHSIVAWTEVQSKQRLFRCLEEAYLRSKCLVLERFMAQLLFELPSPSLLLTFV 569
K R V V+I R++ + G +HAQY + L ++ W+R+S+F L + + S++AW + + R F LE +YL KC+ LE FM +L++E P+LLL FV
Sbjct: 543 KSRVVSATVSIPKFRIVQSRSGSDRHAQYLITLKLGKDLYADWRRYSEFGELVKKLDAERYKRSLLAWRNIDT--RWFNRLEPSYLHQKCITLENFMRELMYESNEPTLLLDFV 654
BLAST of mRNA_P-wetherbeei_contig1126.2.1 vs. uniprot
Match: F0WG32_9STRA (Uncharacterized protein AlNc14C87G5564 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WG32_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 1.040e-8 Identity = 35/110 (31.82%), Postives = 63/110 (57.27%), Query Frame = 3
Query: 246 VPYAVAIGAIRVL--KKGGAQHAQYQVVLSTNSRIWRCWKRFSDFKLLAEYARLSGLQHSIVAWTEVQSKQRLFRCLEEAYLRSKCLVLERFMAQLLFELPSPSLLLTFV 569
+P +++I R++ + G +HAQY + L + + W+R+S+F L + Q S+ AW +++ R F LE +YL KC+ LE FM + ++EL P++L+ F+
Sbjct: 201 IPSSISIPRFRIVQPRHGTDRHAQYLITLRLENEYYAKWRRYSEFSELVNVLQGQRYQRSLKAWKSIET--RWFNRLEPSYLHQKCVGLENFMREFMYELHEPTVLIQFL 308
BLAST of mRNA_P-wetherbeei_contig1126.2.1 vs. uniprot
Match: A0A835ZDH9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDH9_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 1.230e-8 Identity = 37/108 (34.26%), Postives = 62/108 (57.41%), Query Frame = 3
Query: 258 VAIGAIRVLKKGGAQHAQYQVVLSTNSRIWRCWKRFSDFKLLAEYARLSG----LQHSIVAWTEVQSKQRLFRCLEEAYLRSKCLVLERFMAQLLFELPSPSLLLTFV 569
V I ++++ G HA+Y +V+ + W+RF +FK LA S +++ +W ++++QRLFRCL++ YL KC +LERF+ L+FE SP + F+
Sbjct: 286 VHIPKFQIVQSGSDVHAEYLIVVGLGAVTLGVWRRFREFKNLANKLEGSNKRQQFHNALCSWHCLRARQRLFRCLDKDYLILKCFLLERFLHDLVFESMSPDTVREFL 393
BLAST of mRNA_P-wetherbeei_contig1126.2.1 vs. uniprot
Match: A0A8K1FFM1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FFM1_PYTOL) HSP 1 Score: 68.6 bits (166), Expect = 1.330e-8 Identity = 37/114 (32.46%), Postives = 63/114 (55.26%), Query Frame = 3
Query: 234 KGRPVPYAVAIGAIRVLKK--GGAQHAQYQVVLSTNSRIWRCWKRFSDFKLLAEYARLSGLQHSIVAWTEVQSKQRLFRCLEEAYLRSKCLVLERFMAQLLFELPSPSLLLTFV 569
K + V ++I R+++ G +HAQY + L ++ W+R+S+F L++ L + S AW + + R F LE +YL KC+ LE FM +L++E PS+L+ F+
Sbjct: 242 KSKVVSATISIPKFRIVQSRAGSDRHAQYLITLKLGKELYADWRRYSEFGELSKKLDLDRYKRSHEAWRNIDT--RWFNRLEPSYLHQKCITLENFMRELMYESNEPSVLIDFL 353 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1126.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1126.2.1 >prot_P-wetherbeei_contig1126.2.1 ID=prot_P-wetherbeei_contig1126.2.1|Name=mRNA_P-wetherbeei_contig1126.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=155bp MTVVELRHENVTTTKTWQIKGRPVPYAVAIGAIRVLKKGGAQHAQYQVVLback to top mRNA from alignment at P-wetherbeei_contig1126:5476..7823- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1126.2.1 ID=mRNA_P-wetherbeei_contig1126.2.1|Name=mRNA_P-wetherbeei_contig1126.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2348bp|location=Sequence derived from alignment at P-wetherbeei_contig1126:5476..7823- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1126:5476..7823- >mRNA_P-wetherbeei_contig1126.2.1 ID=mRNA_P-wetherbeei_contig1126.2.1|Name=mRNA_P-wetherbeei_contig1126.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=465bp|location=Sequence derived from alignment at P-wetherbeei_contig1126:5476..7823- (Phaeothamnion wetherbeei SAG_119_79)back to top |