mRNA_P-wetherbeei_contig11213.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig11213.4.1 vs. uniprot
Match: A0A496VAZ8_9GAMM (Uncharacterized protein n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A496VAZ8_9GAMM) HSP 1 Score: 65.1 bits (157), Expect = 5.600e-10 Identity = 41/122 (33.61%), Postives = 61/122 (50.00%), Query Frame = 1
Query: 49 VAARHAFADLLALQGRTAIRTADRNPAALGPGDWARAQSRLERALRLDPGEPAIAEDAGRLHEL--RARVAPGPDPKSELSRALGYFRDSLAHRPTSPYTWANLAIVKSGLGEFDAELRGAI 408
+AA ADL A Q R ++ + AL W + L A +P P + E G+ + L R+ V + L +AL Y+ + RP S YTWAN+AI+KS LG++DA+ A+
Sbjct: 45 IAASWGLADLFAKQARYDMQQWEDQ--ALTTDSWKSIHATLTWAQSFEPDHPDLLESTGQAYYLLYRSGVMTAAEQLMALQQALDYYLKAAKQRPVSAYTWANIAILKSRLGQYDAQFLAAL 164
BLAST of mRNA_P-wetherbeei_contig11213.4.1 vs. uniprot
Match: A0A534I062_9GAMM (Uncharacterized protein n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A534I062_9GAMM) HSP 1 Score: 60.5 bits (145), Expect = 1.680e-8 Identity = 40/110 (36.36%), Postives = 54/110 (49.09%), Query Frame = 1
Query: 49 VAARHAFADLLALQGRTAIRTADRNPAALGPGDWARAQSRLERALRLDPGEPAIAEDAGRLHELRARVAPGPDPKSELSR----ALGYFRDSLAHRPTSPYTWANLAIVK 366
VAAR AD+ A ++ ++T L +W L RAL L PG+P + GRLH + E+SR GY+R +LA RPT P+ W NLA+VK
Sbjct: 8 VAARTGLADVYAEPAKSYLQTKRDAGEVLTRDEWQALYGSLTRALALAPGDPDNLSELGRLHRILLEA--DDLDAGEISRYGDAGAGYYRAALALRPTWPWDWGNLALVK 115
BLAST of mRNA_P-wetherbeei_contig11213.4.1 vs. uniprot
Match: A0A534J851_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A534J851_9GAMM) HSP 1 Score: 57.4 bits (137), Expect = 2.800e-7 Identity = 37/110 (33.64%), Postives = 54/110 (49.09%), Query Frame = 1
Query: 49 VAARHAFADLLALQGRTAIRTADRNPAALGPGDWARAQSRLERALRLDPGEPAIAEDAGRLHELRARVAPGPDPKSELSR----ALGYFRDSLAHRPTSPYTWANLAIVK 366
+AAR AD+ A ++ ++T L +W L RAL L PG+P + GRLH + E+SR GY++ +LA RPT P+ W +LA+VK
Sbjct: 10 IAARTGLADVYAESAKSYLQTKRDASEVLTRDEWQALYGSLTRALALAPGDPDNLSELGRLHRIFLEA--NDLDAGEISRYGDAGAGYYQAALALRPTWPWDWGDLALVK 117
BLAST of mRNA_P-wetherbeei_contig11213.4.1 vs. uniprot
Match: A0A0A6P6X6_9GAMM (Uncharacterized protein n=1 Tax=Candidatus Thiomargarita nelsonii TaxID=1003181 RepID=A0A0A6P6X6_9GAMM) HSP 1 Score: 56.6 bits (135), Expect = 5.710e-7 Identity = 30/91 (32.97%), Postives = 48/91 (52.75%), Query Frame = 1
Query: 142 GDWARAQSRLERALRLDPGEPAIAEDAGRLHELRARVAP--GPDPKSELSRALGYFRDSLAHRPTSPYTWANLAIVKSGLGEFDAELRGAI 408
G W + Q+ L A + +P E+ G+ + L R + LS AL Y+ D+ +P S YTWAN+AI+K+ L ++DA+ A+
Sbjct: 50 GHWQQTQTTLRVAQFFESAQPKFLEEMGKANYLLFRYGTITAAEKYMALSLALEYYVDAALQKPVSAYTWANIAILKNRLRQYDAQFITAL 140
BLAST of mRNA_P-wetherbeei_contig11213.4.1 vs. uniprot
Match: A0A661BTL8_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661BTL8_9GAMM) HSP 1 Score: 55.8 bits (133), Expect = 1.230e-6 Identity = 43/126 (34.13%), Postives = 61/126 (48.41%), Query Frame = 1
Query: 40 LAVVAARHAFADLLALQGRTAIRTADRNPAALGPGDWARAQSRLERALRLDPGEPAIAEDAGRLHELR-ARVAPGPDPKSELSRALGY--FRDSLAHRPTSPYTWANLAIVKSGLGEFDAELRGAI 408
LA +AA + AD+ A + L DW ++ L AL+ DP P I E E R A +AP + K+ SR Y ++ +++ RPT P+ W NLA+VK LGE D E A+
Sbjct: 20 LAYIAASWSLADIYARPSFITLEKWRSEKIKLDDDDWDELRANLSYALKHDPDNPNIHEYLALAIEGRYADIAP-KNEKAMPSRREAYTHYKQAISLRPTGPFAWVNLALVKYRLGETDDEFYYAL 144
BLAST of mRNA_P-wetherbeei_contig11213.4.1 vs. uniprot
Match: A0A090AQT6_9GAMM (Uncharacterized protein n=1 Tax=Thioploca ingrica TaxID=40754 RepID=A0A090AQT6_9GAMM) HSP 1 Score: 55.1 bits (131), Expect = 2.560e-6 Identity = 31/88 (35.23%), Postives = 49/88 (55.68%), Query Frame = 1
Query: 148 WARAQSRLERALRLDPGEPAIAEDAGRLHELRARVAPGPDPK-SELSRALGYFRDSLAHRPTSPYTWANLAIVKSGLGEFDAELRGAI 408
W ++L+ A L+P P + E R+H L A G + + L +AL Y ++ RP S YTWAN+A++KS L ++DA+ A+
Sbjct: 59 WQTTLTQLQWANDLEPEHPDLLELLARVHYLLAISNRGIKLQLTSLQQALDYNLKAIQQRPVSAYTWANVALLKSQLKQYDAQFETAL 146
BLAST of mRNA_P-wetherbeei_contig11213.4.1 vs. uniprot
Match: A0A1F3YGZ1_9PROT (Uncharacterized protein n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F3YGZ1_9PROT) HSP 1 Score: 54.7 bits (130), Expect = 3.110e-6 Identity = 34/90 (37.78%), Postives = 47/90 (52.22%), Query Frame = 1
Query: 148 WARAQSRLERALRLDPGEPAIAEDAGRLHELRARV---APGPDPKSELSRALGYFRDSLAHRPTSPYTWANLAIVKSGLGEFDAELRGAI 408
W R L ALRL P +P + ED G +E AR A G + +E AL ++R + RPT PYTW +A++K L + D E A+
Sbjct: 66 WRRTVDELREALRLAPRDPNLWEDLGLAYEAGARKFVRAGGWNVYTEF--ALIHYRQAALLRPTWPYTWIRVALMKYQLNQLDDEFGRAL 153
BLAST of mRNA_P-wetherbeei_contig11213.4.1 vs. uniprot
Match: UPI000849F700 (hypothetical protein n=1 Tax=Candidatus Marithrix sp. Canyon 246 TaxID=1827136 RepID=UPI000849F700) HSP 1 Score: 53.9 bits (128), Expect = 5.830e-6 Identity = 33/114 (28.95%), Postives = 53/114 (46.49%), Query Frame = 1
Query: 67 FADLLALQGRTAIRTADRNPAALGPGDWARAQSRLERALRLDPGEPAIAEDAGRLHELRARVAPGPDPKSELSRALGYFRDSLAHRPTSPYTWANLAIVKSGLGEFDAELRGAI 408
FADL Q ++ ++ + W + L +A L+P P I E G + R G K L + L Y+ ++ +P S Y WAN+AI+K L ++DA+ A+
Sbjct: 35 FADLFVKQANYDLQQWEKQ-GRISQDSWKSIHTMLAKARYLEPYNPEILESQGTAYYQLYRY--GAVKKIVLQQTLNYYLKAVQQKPVSAYIWANIAIIKFRLRQYDAQFLAAL 145 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11213.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig11213.4.1 >prot_P-wetherbeei_contig11213.4.1 ID=prot_P-wetherbeei_contig11213.4.1|Name=mRNA_P-wetherbeei_contig11213.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=136bp MATGTLAVAMLAALAVVAARHAFADLLALQGRTAIRTADRNPAALGPGDWback to top mRNA from alignment at P-wetherbeei_contig11213:1782..2189+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig11213.4.1 ID=mRNA_P-wetherbeei_contig11213.4.1|Name=mRNA_P-wetherbeei_contig11213.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=408bp|location=Sequence derived from alignment at P-wetherbeei_contig11213:1782..2189+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig11213:1782..2189+ >mRNA_P-wetherbeei_contig11213.4.1 ID=mRNA_P-wetherbeei_contig11213.4.1|Name=mRNA_P-wetherbeei_contig11213.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=408bp|location=Sequence derived from alignment at P-wetherbeei_contig11213:1782..2189+ (Phaeothamnion wetherbeei SAG_119_79)back to top |