mRNA_P-wetherbeei_contig112.2.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig112.2.2
Unique NamemRNA_P-wetherbeei_contig112.2.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig112.2.2 vs. uniprot
Match: A0A835YZP2_9STRA (Threonylcarbamoyl-AMP synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZP2_9STRA)

HSP 1 Score: 238 bits (608), Expect = 2.260e-71
Identity = 130/273 (47.62%), Postives = 176/273 (64.47%), Query Frame = 1
Query:  109 KLRGATKTPPAILVEVERLNPIEAEAWKLQPVIDILRDGGVGIIPTDTSFAFVCDVHSRQGVEKIFQLKNVQRQRKPLSLLCKDISTIAKYTAGINKNIFRILKATLPGPYTFILPATHE------------VPKVFLEHKHHSRTWKRREVGVRMPDDPICLEILRSLESPLLCGSVPKGPAGAPDAAAEAIAAAARGEDEAAEAEADLLWASPSR--LANEPAVIYERWKRNVDFIVDAGPIASDRLSTVVDIMGAAPVVLREGAGDVGVV 885
            K RGA  +   + VEV+   P   + WKL P+I+ L++GGVG++PTDT + F CDVHSR+GV++IFQLK    +RKPLSLLCKDISTI+K++ GI+K++F++LK  LPGPYTFI+PATH+            VP++ L+HK H +TWKRREVGVR+PD P+   +L +LE+PL+C SVP   + AP                      D  W+  +R  LA +P  I + W   VDFIV+AGPI S  +STVV+ M   P VLR+G GD G++
Sbjct:   50 KSRGAAASK-CLQVEVD---PEGFDNWKLAPIIETLQNGGVGVLPTDTCYVFACDVHSRRGVDRIFQLKQYVGKRKPLSLLCKDISTISKHSDGIDKDLFKVLKRALPGPYTFIVPATHQARTSMSDNHTARVPRMLLDHKSHKKTWKRREVGVRIPDQPVLHAVLEALENPLICSSVPARLSNAPHDDDXXFXXXXXX---------DAEWSKAARAQLATDPQQIADAWGHAVDFIVNAGPITSAGVSTVVNCMARPPEVLRQGLGDPGLL 309          
BLAST of mRNA_P-wetherbeei_contig112.2.2 vs. uniprot
Match: A0A7S4D661_HETAK (Threonylcarbamoyl-AMP synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D661_HETAK)

HSP 1 Score: 218 bits (555), Expect = 9.020e-64
Identity = 111/231 (48.05%), Postives = 147/231 (63.64%), Query Frame = 1
Query:  181 EAWKLQPVIDILRDGGVGIIPTDTSFAFVCDVHSRQGVEKIFQLKNVQRQRKPLSLLCKDISTIAKYTAGINKNIFRILKATLPGPYTFILPATHEVPKVFLEHKHHSRTWKRREVGVRMPDDPICLEILRSLESPLLCGSVPKGPAGAPDAAAEAIAAAARGEDEAAEAEADLLWASPSRLANEPAVIYERWKRNVDFIVDAGPIASD-RLSTVVDIMGAAPVVLREGAG 870
            + W+L PVID+++ G VG+IPTDTS+AFVCDVH+  GVE++ +LK+ +  +KPL+LLCKDIS I+KYT   +K +F++LK   PGPYT I+ A+ EVPK F+E K H R WKRREVGVR+PD  +C  IL  L+ PLLC SVP                    ++E         +  PS +  E + I E W   VDF+VD GPI +D + STVVD+    P VLREG+G
Sbjct:   73 DGWRLDPVIDLIKQGAVGVIPTDTSYAFVCDVHNTNGVERMMRLKHAESVKKPLALLCKDISMISKYTKSTDKTVFKLLKQCFPGPYTLIMSASPEVPKGFVESKTHRRLWKRREVGVRVPDQEVCSLILSELDDPLLCSSVPSS------------------KEE---------YNMPSYIHREASSIMEAWYNQVDFVVDCGPIPADFKFSTVVDLTLPEPAVLREGSG 276          
BLAST of mRNA_P-wetherbeei_contig112.2.2 vs. uniprot
Match: A0A7J7IFU6_9RHOD (Threonylcarbamoyl-AMP synthase n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IFU6_9RHOD)

HSP 1 Score: 200 bits (509), Expect = 4.990e-57
Identity = 112/235 (47.66%), Postives = 152/235 (64.68%), Query Frame = 1
Query:  181 EAWKLQPVIDILRD---GGVGIIPTDTSFAFVCDVHSRQGVEKIFQLKNVQRQ-RKPLSLLCKDISTIAKYTAGINKNIFRILKATLPGPYTFILPATHEVPKVFLEHKHHSRTWKRREVGVRMPDDPICLEILRSLES-PLLCGSVPKGPAGAPDAAAEAIAAAARGEDEAAEAEADLLWASPSRLANEPAVIYERWKRNVDFIVDAGPIASDRLSTVVDIMGAAPVVLREGAG 870
            + W+L+PV ++LRD   G VGI+PTDTS+AFVC++HSR GVE+I+ LK      RKPLSLLC++ STI +YT  ++K  F++L++ LPGPYTFILPATHEVP+V +E++ H + WKRREVG+R P +P C  ++ +L+   LL  SVP       D  +E        EDE               LA +PA I  +W+R VDFI+ AG ++SD  STVVD++    V LREG G
Sbjct:   51 DLWRLEPVFELLRDPSRGAVGILPTDTSYAFVCNLHSRAGVERIYALKKTPPSVRKPLSLLCRNHSTIQRYTTVMDKRTFKVLRSLLPGPYTFILPATHEVPRVMIENRTHRKMWKRREVGIRWPREPHCQAVMDALDGVALLASSVP-------DIDSE--------EDE---------------LAGDPAKILAQWERQVDFIISAGSLSSDMKSTVVDVLRGWQV-LREGLG 254          
BLAST of mRNA_P-wetherbeei_contig112.2.2 vs. uniprot
Match: A0A7S0Y1Y4_HEMAN (Threonylcarbamoyl-AMP synthase n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0Y1Y4_HEMAN)

HSP 1 Score: 202 bits (515), Expect = 5.570e-57
Identity = 105/254 (41.34%), Postives = 160/254 (62.99%), Query Frame = 1
Query:  118 GATKTPPAILVEVERLNPIEAEAWKLQPVIDILRDGGVGIIPTDTSFAFVCDVHSRQGVEKIFQLKNVQRQR--KPLSLLCKDISTIAKYTAGIN-KNIFRILKATLPGPYTFILPATHEVPKVFLEHKHHSRTWKRREVGVRMPDDPICLEILRSLESPLLCGSVPKGPAGAPDAAAEAIAAAARGEDEAAEAEADLLWASPSRLANEPAVIYERWKRNVDFIVDAGPIASDRLSTVVDIMGAAPVVLREGAG 870
            G TK+  AI VE+E     + +AW+L+  IDI++ GG+G++PTD+ ++FV DV SR+GV++++ L  ++ ++  KPL+LLC  IS I+ YT  +N K +F++LKATLPGPYTFI P+T+E+P+V LEHK H  TWKR+E+GVR+PDD  CL  L+ L++P+L  SVP+                        EA+ ++          +PA++ +RW+  +DF++  GP      +TVVD+    P +LREG G
Sbjct:  136 GGTKSRKAIYVEIE---DADQDAWRLEQAIDIIKQGGLGVVPTDSCYSFVTDVQSRKGVDRLYALVRLENEKVKKPLALLCHSISQISSYTTAVNFKKVFKMLKATLPGPYTFIFPSTNELPRVILEHKKH--TWKRKEIGVRVPDDDCCLSFLKGLDNPVLVYSVPR------------------------EAKGEMQ-------PFDPALVLDRWENEIDFVIANGPRTEGMSTTVVDMTNDEPELLREGEG 353          
BLAST of mRNA_P-wetherbeei_contig112.2.2 vs. uniprot
Match: A0A7S0ZI44_9RHOD (Threonylcarbamoyl-AMP synthase n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZI44_9RHOD)

HSP 1 Score: 192 bits (487), Expect = 4.770e-54
Identity = 99/237 (41.77%), Postives = 145/237 (61.18%), Query Frame = 1
Query:  175 EAEAWKLQPVIDILRDGGVGIIPTDTSFAFVCDVHSRQGVEKIFQLKNVQRQRKPLSLLCKDISTIAKYTAGINKNIFRILKATLPGPYTFILPATHEVPKVFLEHKHHSRTWKRREVGVRMPDDPICLEILRSLESPLLCGSVPKGPAGAPDAAAEAIAAAARGEDEAAEAEADLLWASPSRLANEPAVIYERWKRNVDFIVDAGPIASDRLSTVVDIMGAAPVVLREGAGDVGVV 885
            E + WKL  +  +L++G +GIIPTD+S++FVC + +R+G+++I+QLKN+   +KPLSL+C ++S + KYT  I+K +F++L+A LPGPYTFILPA   VP+V LEHK H + WKRREVG+R+P+D  CL IL  LE PLL  S+                     +DE  E          S+  + P  + +RW  +VDFIV  G       ST++D       V+REG+GD+ ++
Sbjct:   61 EYDLWKLDSIPKMLKEGALGIIPTDSSYSFVCTMSNREGMDRIYQLKNLSGTKKPLSLICSNLSMVQKYTHSIDKPMFKMLRAALPGPYTFILPANSSVPRVILEHKVHRKVWKRREVGIRVPNDMYCLAILEQLEEPLLVSSI---------------------QDEENE----------SKSQDCPGALLDRWGSSVDFIVGVGE-RKKHPSTIIDCTKIPYEVIREGSGDLSIL 265          
BLAST of mRNA_P-wetherbeei_contig112.2.2 vs. uniprot
Match: A0A7S0EEL6_9CRYP (Threonylcarbamoyl-AMP synthase n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0EEL6_9CRYP)

HSP 1 Score: 183 bits (464), Expect = 1.350e-50
Identity = 102/276 (36.96%), Postives = 160/276 (57.97%), Query Frame = 1
Query:   67 LRPSPSQIPSVTVMKLRGATKTPPA-ILVEVERLNPIEAEAWKLQPVIDILRDGGVGIIPTDTSFAFVCDVHSRQGVEKIFQLKNVQR-QRKPLSLLCKDISTIAKYTAGIN-KNIFRILKATLPGPYTFILPATHEVPKVFLEHKHHSRTWKRREVGVRMPDDPICLEILRSLESPLLCGSVPKGPAGAPDAAAEAIAAAARGEDEAAEAEADLLWASPSRLANEPAVIYERWKRNVDFIVDAGPIASDRLSTVVDIMGAAPVVLREGAGDVGVV 885
            L PSP+  P+V+ +     ++     + VE+E    I   AWKL PV  IL++GG+GI+PTDTS+AFV  + SR+GV +++ LK     ++KP ++LC  IS I+KYT  IN K++F++LK  LPGPYTFI P+T+++P++ ++HK H++ WKR+E+GVR+P D +CLE++  + +PLLC  V K                                      +     ++   K  +DF+V AG   ++  ST+VD+     V+LREGAGD+ ++
Sbjct:   27 LPPSPTCRPAVSSLSRAAKSRQEAGPVFVEIE---DIGHGAWKLDPVAAILKEGGLGIVPTDTSYAFVTSIESREGVSRLYDLKQQDSIKKKPFAILCDSISQISKYTTAINFKSVFKMLKEVLPGPYTFICPSTNDLPRMIIDHKKHAKIWKRKEIGVRIPKDQVCLELISKVGTPLLCAGVHK----------------------------------TDEESFSVGHVFAENKNLIDFMVAAGERNAES-STIVDLTKEPAVILREGAGDIDIL 264          
BLAST of mRNA_P-wetherbeei_contig112.2.2 vs. uniprot
Match: A0A7S2TTY3_9EUKA (Threonylcarbamoyl-AMP synthase n=2 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TTY3_9EUKA)

HSP 1 Score: 181 bits (458), Expect = 1.600e-50
Identity = 95/236 (40.25%), Postives = 145/236 (61.44%), Query Frame = 1
Query:  115 RGATKTPPAIL---VEVERLNPIEAEAWKLQPVIDILRDGGVGIIPTDTSFAFVCDVHSRQGVEKIFQLKNVQRQ-RKPLSLLCKDISTIAKYTAGI-NKNIFRILKATLPGPYTFILPATHEVPKVFLEHKHHSRTWKRREVGVRMPDDPICLEILRSLESPLLCGSVPKGPAGAPDAAAEAIAAAARGEDEAAEAEADLLWASPSRLANEPAVIYERWKRNVDFIVDAGPIASD 807
            R  T+TP A     +EVE     E + WKL   +  +++GG+ ++PTD+ +AFV DV+S++ V++I+ LKN+  + +KPLSLLC  IS I+ YT+G+ +K  F+ILK+TLPGPYT+ILPA++++P++ LEHK H + WKR+E+GVR+PDDP+C E L+ + +P+LC SVP                               +    ++LA E + I   W   VDFI+D G  ++D
Sbjct:   11 RRLTRTPRAKYAPTIEVEG----EWDFWKLDSAVKAVKEGGIVVLPTDSCYAFVADVNSKEAVQRIYALKNIDPETKKPLSLLCHSISQISDYTSGMQSKAAFKILKSTLPGPYTYILPASNKLPRMILEHKEHKKVWKRKEIGVRVPDDPVCQEFLKLIGNPVLCSSVP-------------------------------IDTETNKLAVEGSEIERAWAHRVDFIIDNGAHSAD 211          
BLAST of mRNA_P-wetherbeei_contig112.2.2 vs. uniprot
Match: A0A7S3Z127_9EUKA (Threonylcarbamoyl-AMP synthase n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z127_9EUKA)

HSP 1 Score: 183 bits (464), Expect = 2.890e-50
Identity = 97/239 (40.59%), Postives = 149/239 (62.34%), Query Frame = 1
Query:  175 EAEAWKLQPVIDILRDGGVGIIPTDTSFAFVCDVHSRQGVEKIFQLKNVQRQ-RKPLSLLCKDISTIAKYTAGI-NKNIFRILKATLPGPYTFILPATHEVPKVFLEHKHHSRTWKRREVGVRMPDDPICLEILRSLESPLLCGSVPKGPAGAPDAAAEAIAAAARGEDEAAEAEADLLWASPSRLANEPAVIYERWKRNVDFIVDAGPIASDRLSTVVDI-MGAAPVVLREGAGDVGV 882
            E + WKL   +  ++DGG+ ++PTD+ +AFV DV+S++ V++I+ LKN+  + +KPLSLLC  IS I+ +T+G+ +K  F+ILK+TLPGPYT+ILPA++++P++ LEHK H + WKR+E+GVR+P D +C E L+ + +P+LC SVP                                    ++LA E + I   W   VDFI+D G   ++  +TVVD+ +     VLREGAG+VG+
Sbjct:   85 EWDFWKLDSAVKAVKDGGIVVLPTDSCYAFVADVNSKEAVQRIYALKNIDPETKKPLSLLCHSISQISDFTSGMQSKAAFKILKSTLPGPYTYILPASNKLPRMILEHKEHKKVWKRKEIGVRVPQDSVCQEFLKLMGNPVLCSSVPSD-------------------------------TESNQLAVEGSEIERTWAHRVDFIIDNGYRQTEP-TTVVDMTIEDGLKVLREGAGEVGI 291          
BLAST of mRNA_P-wetherbeei_contig112.2.2 vs. uniprot
Match: L1JNX7_GUITC (Threonylcarbamoyl-AMP synthase n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JNX7_GUITC)

HSP 1 Score: 177 bits (448), Expect = 2.470e-48
Identity = 98/259 (37.84%), Postives = 150/259 (57.92%), Query Frame = 1
Query:  115 RGATKTPPAILVEVERLNPIEAEAWKLQPVIDILRDGGVGIIPTDTSFAFVCDVHSRQGVEKIFQLKNVQR-QRKPLSLLCKDISTIAKYTAGIN-KNIFRILKATLPGPYTFILPATHEVPKVFLEHKHHSRTWKRREVGVRMPDDPICLEILRSLESPLLCGSVPKGPAGAPDAAAEAIAAAARGEDEAAEAEADLLWASPSRLANEPAVIYERWKRNVDFIVDAGPIASDRLSTVVDIMGAAPVVLREGAGDVGVV 885
            R A   P A  V VE +  I   AW+L  + + LR+GG+GIIPTDTS+AFV  + SR GV ++++LK     ++KP S+LC  IS I+KYT  IN K++F++LK  LPGPYTFI P+T+++P++ ++HK H++ WKR+E+GVR+P D +CL+++  + +PLLC  V K                                      +     ++   +  +DF+V AG   ++  ST+VD+     V+LREGAG+V V+
Sbjct:   36 RSAKSKPAASPVFVE-IEDIGHSAWRLDSIAETLREGGLGIIPTDTSYAFVTSIESRDGVSRLYELKQQDSIKKKPFSILCDSISQISKYTTAINFKSVFKMLKEVLPGPYTFICPSTNDLPRMIIDHKKHAKIWKRKEIGVRIPKDEVCLQLIGKVGTPLLCAGVHK----------------------------------TDEESYSIGHVFAENENLIDFMVAAGERNAES-STIVDLTKEPAVILREGAGNVEVL 258          
BLAST of mRNA_P-wetherbeei_contig112.2.2 vs. uniprot
Match: M1VEW8_CYAM1 (Threonylcarbamoyl-AMP synthase n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1VEW8_CYAM1)

HSP 1 Score: 176 bits (447), Expect = 5.440e-48
Identity = 111/264 (42.05%), Postives = 150/264 (56.82%), Query Frame = 1
Query:   94 SVTVMKLRGATKTPPAILVEVERLNPIEAEAWKLQPVIDILRD---GGVGIIPTDTSFAFVCDVHSRQGVEKIFQLKNVQRQ-RKPLSLLCKDISTIAKYTAGINKNIFRILKATLPGPYTFILPATHEVPKVFLEHKHHSRTWKRREVGVRMPDDPICLEILRSLES-PLLCGSVPKGPAGAPDAAAEAIAAAARGEDEAAEAEADLLWASPSRLANEPAVIYERWKRNVDFIVDAGPIASDRLSTVVDIMGAAPVVLREGAG 870
            S+T  + R  +K  P + VEV        + W+LQ V ++LRD   G VGI+PTDTS+AFVC++HSR GVE+I+ LK      RKPLSLLC++ + I +Y   ++K  F++LKA LPGPYTFILPATHEVP+V +E++ H + WKRRE+GVR P DP C   + +L+   LL  SVP                    +DE  E   D  +            + E W+  VDF+++AG       STVVD+     V LREG G
Sbjct:   25 SLTSGRHRADSKRDPFLYVEVSGDGD---DVWRLQNVFELLRDPSRGVVGILPTDTSYAFVCNLHSRTGVERIYSLKKTPPSVRKPLSLLCRNHAAIQRYALVLDKRTFKVLKALLPGPYTFILPATHEVPRVMIENRVHRKMWKRREIGVRWPRDPYCQAAMDALDGVALLASSVP--------------------DDEVEEDGVDRDYLR----------MLEHWEHEVDFMINAGARTIGLKSTVVDVTRGWRV-LREGLG 254          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig112.2.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YZP2_9STRA2.260e-7147.62Threonylcarbamoyl-AMP synthase n=1 Tax=Tribonema m... [more]
A0A7S4D661_HETAK9.020e-6448.05Threonylcarbamoyl-AMP synthase n=1 Tax=Heterosigma... [more]
A0A7J7IFU6_9RHOD4.990e-5747.66Threonylcarbamoyl-AMP synthase n=1 Tax=Cyanidiococ... [more]
A0A7S0Y1Y4_HEMAN5.570e-5741.34Threonylcarbamoyl-AMP synthase n=2 Tax=Hemiselmis ... [more]
A0A7S0ZI44_9RHOD4.770e-5441.77Threonylcarbamoyl-AMP synthase n=1 Tax=Timspurckia... [more]
A0A7S0EEL6_9CRYP1.350e-5036.96Threonylcarbamoyl-AMP synthase n=1 Tax=Hanusia phi... [more]
A0A7S2TTY3_9EUKA1.600e-5040.25Threonylcarbamoyl-AMP synthase n=2 Tax=Lotharella ... [more]
A0A7S3Z127_9EUKA2.890e-5040.59Threonylcarbamoyl-AMP synthase n=1 Tax=Lotharella ... [more]
L1JNX7_GUITC2.470e-4837.84Threonylcarbamoyl-AMP synthase n=2 Tax=Guillardia ... [more]
M1VEW8_CYAM15.440e-4842.05Threonylcarbamoyl-AMP synthase n=1 Tax=Cyanidiosch... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig112contigP-wetherbeei_contig112:868..3064 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog55529.EKX50266
PFAMsSua5_yciO_yrdC
Model size1497
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorymitochondrion
Exons4
Evalue1.4e-51
EggNOG OGsCOG0009@1|root,KOG3051@2759|Eukaryota
Ec32 ortholog descriptiontranslation factor
Ec32 orthologEc-24_001520.1
DescriptionL-threonylcarbamoyladenylate synthase
Cds size876
COG categoryJ
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig112.2.2prot_P-wetherbeei_contig112.2.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig112 892..2467 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185901.5790553-UTR-P-wetherbeei_contig112:867..8911683185901.5790553-UTR-P-wetherbeei_contig112:867..891Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig112 868..891 +
1683185901.6256123-UTR-P-wetherbeei_contig112:2467..30641683185901.6256123-UTR-P-wetherbeei_contig112:2467..3064Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig112 2468..3064 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185901.5892248-CDS-P-wetherbeei_contig112:891..11671683185901.5892248-CDS-P-wetherbeei_contig112:891..1167Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig112 892..1167 +
1683185901.6000302-CDS-P-wetherbeei_contig112:1360..15371683185901.6000302-CDS-P-wetherbeei_contig112:1360..1537Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig112 1361..1537 +
1683185901.609968-CDS-P-wetherbeei_contig112:1793..19001683185901.609968-CDS-P-wetherbeei_contig112:1793..1900Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig112 1794..1900 +
1683185901.6176887-CDS-P-wetherbeei_contig112:2151..24671683185901.6176887-CDS-P-wetherbeei_contig112:2151..2467Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig112 2152..2467 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig112.2.2

>prot_P-wetherbeei_contig112.2.2 ID=prot_P-wetherbeei_contig112.2.2|Name=mRNA_P-wetherbeei_contig112.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=292bp
MLPLVSTLVVRSTALRPSPSQIPSVTVMKLRGATKTPPAILVEVERLNPI
EAEAWKLQPVIDILRDGGVGIIPTDTSFAFVCDVHSRQGVEKIFQLKNVQ
RQRKPLSLLCKDISTIAKYTAGINKNIFRILKATLPGPYTFILPATHEVP
KVFLEHKHHSRTWKRREVGVRMPDDPICLEILRSLESPLLCGSVPKGPAG
APDAAAEAIAAAARGEDEAAEAEADLLWASPSRLANEPAVIYERWKRNVD
FIVDAGPIASDRLSTVVDIMGAAPVVLREGAGDVGVVLAGV*
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mRNA from alignment at P-wetherbeei_contig112:868..3064+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig112.2.2 ID=mRNA_P-wetherbeei_contig112.2.2|Name=mRNA_P-wetherbeei_contig112.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2197bp|location=Sequence derived from alignment at P-wetherbeei_contig112:868..3064+ (Phaeothamnion wetherbeei SAG_119_79)
TCGCTTTTCGCGCTCTTCTTCTTCATGCTGCCGCTGGTATCGACGCTCGT CGTCCGGTCCACCGCTTTGAGGCCTTCGCCTTCTCAAATTCCTTCAGTGA CCGTCATGAAGTTGAGGGGTGCAACGAAAACTCCACCGGCGATTCTGGTC GAGGTTGAACGTCTCAATCCGATCGAGGCAGAGGCTTGGAAGCTGCAGCC TGTCATCGACATTCTGCGCGATGGCGGCGTGGGCATCATCCCGACCGACA CGAGCTTCGCATTTGTCTGTGATGTGCACAGCCGCCAAGGCGTGGAAAAG GTGAGCACTTATTTCTGAGGTCTGGTCAACTGGTAACGCCTTTCTGGCTT CTTTCTTCGAGGAGTGTCTAGTCTTTAAGGAAAATATAGTCTTAAAGGAC GATCTAGTCTTTAAAAGGGACTAGAAATGAACGCTTCACTTCTTCCATTT TTGCCATTATCATTCTCGGTTTCCACGTCTTGAAATTTGGCAGATTTTCC AACTGAAAAATGTGCAGCGGCAAAGAAAGCCGCTGTCGCTGCTATGCAAA GACATCAGCACCATAGCGAAATACACCGCCGGAATCAACAAGAACATTTT CCGCATCTTGAAAGCGACGTTGCCGGGCCCCTACACCTTCATCCTGCCGG CGACGCACGAGGTGCCGAAGGTGAGAAAAGATTTCTGATTTTTGAAAACG AGAAACCAGCAAGAGGTCGGTTGCACGGACGGAAGCCCACCCAAAACCAG ACGAATCAGAGCCGTTTTGTACCTACCTTGATAAGTGCGGCATCTGCTCT CCGTCGGAACGCCGGCTGCCGCTCAAAATACTGCAACGCGTTGGTGAATG TGCCGTGTAGTAGGCAGCTCACAATGCCTGGCCATCGGCATATTTCGCCA AAACGTGTTGTGTCGTCTGCCCGCAGGTCTTCCTTGAGCACAAGCACCAC AGCCGGACGTGGAAGCGGCGGGAGGTCGGCGTCCGCATGCCGGACGACCC CATCTGCCTGGAGATACTTCGATCCCTCGAAAGGTCCACGTCGTTTTCTT ATTTCTTCGGTCCTTTGTGCTCATCCACTGCTTGCCCCCCGAAAGGCCTG CCGCGTCTTCTCGACAAAAGTGCTGACTGCCAAAAGTCTCATGAGCAAAA GCGCTTGCTGCCTTTTCCTCCTCAGCCTCTCCATGGTTCGCCTTTGCTCA TGCCCACGCCTACCGCCACACTAATTCCTTCATATTCCCCTCGCATCGCG TTCCCTTCTTGCGGGAAAACAACACGGTCCGCAGCCCGCTGCTGTGCGGA AGCGTGCCCAAGGGACCGGCCGGTGCGCCCGACGCGGCCGCCGAAGCCAT CGCTGCCGCCGCCCGCGGCGAAGACGAAGCCGCCGAGGCTGAAGCTGACC TGCTGTGGGCGTCGCCGTCACGGCTGGCCAACGAACCTGCGGTCATCTAC GAGCGCTGGAAGCGCAACGTGGACTTCATTGTTGACGCCGGCCCGATCGC ATCAGACCGGCTTAGCACCGTAGTGGATATCATGGGAGCCGCGCCGGTCG TGCTGCGGGAGGGCGCCGGCGACGTCGGCGTCGTCCTGGCGGGCGTGTGA TGGAGTTCGACGCGGAGGAACGGGAGCAAGGCGTAGGCTGAAGAGAGCGG CGGCGAGGTAGCGTCGGCGGCGGCGAAAGAAAGCGGCCGGCGAAGGCACC GTCGACGGCAACGGAAGAGAGCGGCGGCGAAAGCAGCGTCAGCGACGACT GAAGAGAGCGGCGGCGAATACGGCGGCGGAAGCGGTGGCGAAAGCGGTGG CGGAAGCGGCGGCGGCAGTGGCAGCAGCGGTGGCAGCAGCTGCAGCAGCG GATCGCCAAGACGTGCGTCGGACGGTGCTCGTGGAGGGACAACGGCAGGT CGAAATGGCTAATAATAAGGTACGTGTGTGCAACGGGGCGGTGGTAGGCT GAACGGACGCCTGCCACGAAGGTATGGCATTTTTTGTGTATACATAGTGA CAGTCCTCCTGGTAGTTAGTGTTAGCACATCACACGGTAGATACATCGCA GCGGGAGGAGAGGAAGGGATAAAAGGGATTTCAATGGCGGGGAGGCGGCA GGCTGCTTCCCCACAGTCCAGGCGGGCAGTCGGCCTTTCACAGTGAGAAT GGCCGCATTAACCATGGCTGCCGTAAATCAACTTTTTGCAGATGCAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig112:868..3064+

>mRNA_P-wetherbeei_contig112.2.2 ID=mRNA_P-wetherbeei_contig112.2.2|Name=mRNA_P-wetherbeei_contig112.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=876bp|location=Sequence derived from alignment at P-wetherbeei_contig112:868..3064+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCTGCCGCTGGTATCGACGCTCGTCGTCCGGTCCACCGCTTTGAGGCC
TTCGCCTTCTCAAATTCCTTCAGTGACCGTCATGAAGTTGAGGGGTGCAA
CGAAAACTCCACCGGCGATTCTGGTCGAGGTTGAACGTCTCAATCCGATC
GAGGCAGAGGCTTGGAAGCTGCAGCCTGTCATCGACATTCTGCGCGATGG
CGGCGTGGGCATCATCCCGACCGACACGAGCTTCGCATTTGTCTGTGATG
TGCACAGCCGCCAAGGCGTGGAAAAGATTTTCCAACTGAAAAATGTGCAG
CGGCAAAGAAAGCCGCTGTCGCTGCTATGCAAAGACATCAGCACCATAGC
GAAATACACCGCCGGAATCAACAAGAACATTTTCCGCATCTTGAAAGCGA
CGTTGCCGGGCCCCTACACCTTCATCCTGCCGGCGACGCACGAGGTGCCG
AAGGTCTTCCTTGAGCACAAGCACCACAGCCGGACGTGGAAGCGGCGGGA
GGTCGGCGTCCGCATGCCGGACGACCCCATCTGCCTGGAGATACTTCGAT
CCCTCGAAAGCCCGCTGCTGTGCGGAAGCGTGCCCAAGGGACCGGCCGGT
GCGCCCGACGCGGCCGCCGAAGCCATCGCTGCCGCCGCCCGCGGCGAAGA
CGAAGCCGCCGAGGCTGAAGCTGACCTGCTGTGGGCGTCGCCGTCACGGC
TGGCCAACGAACCTGCGGTCATCTACGAGCGCTGGAAGCGCAACGTGGAC
TTCATTGTTGACGCCGGCCCGATCGCATCAGACCGGCTTAGCACCGTAGT
GGATATCATGGGAGCCGCGCCGGTCGTGCTGCGGGAGGGCGCCGGCGACG
TCGGCGTCGTCCTGGCGGGCGTGTGA
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