mRNA_P-wetherbeei_contig112.2.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig112.2.2 vs. uniprot
Match: A0A835YZP2_9STRA (Threonylcarbamoyl-AMP synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZP2_9STRA) HSP 1 Score: 238 bits (608), Expect = 2.260e-71 Identity = 130/273 (47.62%), Postives = 176/273 (64.47%), Query Frame = 1
Query: 109 KLRGATKTPPAILVEVERLNPIEAEAWKLQPVIDILRDGGVGIIPTDTSFAFVCDVHSRQGVEKIFQLKNVQRQRKPLSLLCKDISTIAKYTAGINKNIFRILKATLPGPYTFILPATHE------------VPKVFLEHKHHSRTWKRREVGVRMPDDPICLEILRSLESPLLCGSVPKGPAGAPDAAAEAIAAAARGEDEAAEAEADLLWASPSR--LANEPAVIYERWKRNVDFIVDAGPIASDRLSTVVDIMGAAPVVLREGAGDVGVV 885
K RGA + + VEV+ P + WKL P+I+ L++GGVG++PTDT + F CDVHSR+GV++IFQLK +RKPLSLLCKDISTI+K++ GI+K++F++LK LPGPYTFI+PATH+ VP++ L+HK H +TWKRREVGVR+PD P+ +L +LE+PL+C SVP + AP D W+ +R LA +P I + W VDFIV+AGPI S +STVV+ M P VLR+G GD G++
Sbjct: 50 KSRGAAASK-CLQVEVD---PEGFDNWKLAPIIETLQNGGVGVLPTDTCYVFACDVHSRRGVDRIFQLKQYVGKRKPLSLLCKDISTISKHSDGIDKDLFKVLKRALPGPYTFIVPATHQARTSMSDNHTARVPRMLLDHKSHKKTWKRREVGVRIPDQPVLHAVLEALENPLICSSVPARLSNAPHDDDXXFXXXXXX---------DAEWSKAARAQLATDPQQIADAWGHAVDFIVNAGPITSAGVSTVVNCMARPPEVLRQGLGDPGLL 309
BLAST of mRNA_P-wetherbeei_contig112.2.2 vs. uniprot
Match: A0A7S4D661_HETAK (Threonylcarbamoyl-AMP synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D661_HETAK) HSP 1 Score: 218 bits (555), Expect = 9.020e-64 Identity = 111/231 (48.05%), Postives = 147/231 (63.64%), Query Frame = 1
Query: 181 EAWKLQPVIDILRDGGVGIIPTDTSFAFVCDVHSRQGVEKIFQLKNVQRQRKPLSLLCKDISTIAKYTAGINKNIFRILKATLPGPYTFILPATHEVPKVFLEHKHHSRTWKRREVGVRMPDDPICLEILRSLESPLLCGSVPKGPAGAPDAAAEAIAAAARGEDEAAEAEADLLWASPSRLANEPAVIYERWKRNVDFIVDAGPIASD-RLSTVVDIMGAAPVVLREGAG 870
+ W+L PVID+++ G VG+IPTDTS+AFVCDVH+ GVE++ +LK+ + +KPL+LLCKDIS I+KYT +K +F++LK PGPYT I+ A+ EVPK F+E K H R WKRREVGVR+PD +C IL L+ PLLC SVP ++E + PS + E + I E W VDF+VD GPI +D + STVVD+ P VLREG+G
Sbjct: 73 DGWRLDPVIDLIKQGAVGVIPTDTSYAFVCDVHNTNGVERMMRLKHAESVKKPLALLCKDISMISKYTKSTDKTVFKLLKQCFPGPYTLIMSASPEVPKGFVESKTHRRLWKRREVGVRVPDQEVCSLILSELDDPLLCSSVPSS------------------KEE---------YNMPSYIHREASSIMEAWYNQVDFVVDCGPIPADFKFSTVVDLTLPEPAVLREGSG 276
BLAST of mRNA_P-wetherbeei_contig112.2.2 vs. uniprot
Match: A0A7J7IFU6_9RHOD (Threonylcarbamoyl-AMP synthase n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IFU6_9RHOD) HSP 1 Score: 200 bits (509), Expect = 4.990e-57 Identity = 112/235 (47.66%), Postives = 152/235 (64.68%), Query Frame = 1
Query: 181 EAWKLQPVIDILRD---GGVGIIPTDTSFAFVCDVHSRQGVEKIFQLKNVQRQ-RKPLSLLCKDISTIAKYTAGINKNIFRILKATLPGPYTFILPATHEVPKVFLEHKHHSRTWKRREVGVRMPDDPICLEILRSLES-PLLCGSVPKGPAGAPDAAAEAIAAAARGEDEAAEAEADLLWASPSRLANEPAVIYERWKRNVDFIVDAGPIASDRLSTVVDIMGAAPVVLREGAG 870
+ W+L+PV ++LRD G VGI+PTDTS+AFVC++HSR GVE+I+ LK RKPLSLLC++ STI +YT ++K F++L++ LPGPYTFILPATHEVP+V +E++ H + WKRREVG+R P +P C ++ +L+ LL SVP D +E EDE LA +PA I +W+R VDFI+ AG ++SD STVVD++ V LREG G
Sbjct: 51 DLWRLEPVFELLRDPSRGAVGILPTDTSYAFVCNLHSRAGVERIYALKKTPPSVRKPLSLLCRNHSTIQRYTTVMDKRTFKVLRSLLPGPYTFILPATHEVPRVMIENRTHRKMWKRREVGIRWPREPHCQAVMDALDGVALLASSVP-------DIDSE--------EDE---------------LAGDPAKILAQWERQVDFIISAGSLSSDMKSTVVDVLRGWQV-LREGLG 254
BLAST of mRNA_P-wetherbeei_contig112.2.2 vs. uniprot
Match: A0A7S0Y1Y4_HEMAN (Threonylcarbamoyl-AMP synthase n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0Y1Y4_HEMAN) HSP 1 Score: 202 bits (515), Expect = 5.570e-57 Identity = 105/254 (41.34%), Postives = 160/254 (62.99%), Query Frame = 1
Query: 118 GATKTPPAILVEVERLNPIEAEAWKLQPVIDILRDGGVGIIPTDTSFAFVCDVHSRQGVEKIFQLKNVQRQR--KPLSLLCKDISTIAKYTAGIN-KNIFRILKATLPGPYTFILPATHEVPKVFLEHKHHSRTWKRREVGVRMPDDPICLEILRSLESPLLCGSVPKGPAGAPDAAAEAIAAAARGEDEAAEAEADLLWASPSRLANEPAVIYERWKRNVDFIVDAGPIASDRLSTVVDIMGAAPVVLREGAG 870
G TK+ AI VE+E + +AW+L+ IDI++ GG+G++PTD+ ++FV DV SR+GV++++ L ++ ++ KPL+LLC IS I+ YT +N K +F++LKATLPGPYTFI P+T+E+P+V LEHK H TWKR+E+GVR+PDD CL L+ L++P+L SVP+ EA+ ++ +PA++ +RW+ +DF++ GP +TVVD+ P +LREG G
Sbjct: 136 GGTKSRKAIYVEIE---DADQDAWRLEQAIDIIKQGGLGVVPTDSCYSFVTDVQSRKGVDRLYALVRLENEKVKKPLALLCHSISQISSYTTAVNFKKVFKMLKATLPGPYTFIFPSTNELPRVILEHKKH--TWKRKEIGVRVPDDDCCLSFLKGLDNPVLVYSVPR------------------------EAKGEMQ-------PFDPALVLDRWENEIDFVIANGPRTEGMSTTVVDMTNDEPELLREGEG 353
BLAST of mRNA_P-wetherbeei_contig112.2.2 vs. uniprot
Match: A0A7S0ZI44_9RHOD (Threonylcarbamoyl-AMP synthase n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZI44_9RHOD) HSP 1 Score: 192 bits (487), Expect = 4.770e-54 Identity = 99/237 (41.77%), Postives = 145/237 (61.18%), Query Frame = 1
Query: 175 EAEAWKLQPVIDILRDGGVGIIPTDTSFAFVCDVHSRQGVEKIFQLKNVQRQRKPLSLLCKDISTIAKYTAGINKNIFRILKATLPGPYTFILPATHEVPKVFLEHKHHSRTWKRREVGVRMPDDPICLEILRSLESPLLCGSVPKGPAGAPDAAAEAIAAAARGEDEAAEAEADLLWASPSRLANEPAVIYERWKRNVDFIVDAGPIASDRLSTVVDIMGAAPVVLREGAGDVGVV 885
E + WKL + +L++G +GIIPTD+S++FVC + +R+G+++I+QLKN+ +KPLSL+C ++S + KYT I+K +F++L+A LPGPYTFILPA VP+V LEHK H + WKRREVG+R+P+D CL IL LE PLL S+ +DE E S+ + P + +RW +VDFIV G ST++D V+REG+GD+ ++
Sbjct: 61 EYDLWKLDSIPKMLKEGALGIIPTDSSYSFVCTMSNREGMDRIYQLKNLSGTKKPLSLICSNLSMVQKYTHSIDKPMFKMLRAALPGPYTFILPANSSVPRVILEHKVHRKVWKRREVGIRVPNDMYCLAILEQLEEPLLVSSI---------------------QDEENE----------SKSQDCPGALLDRWGSSVDFIVGVGE-RKKHPSTIIDCTKIPYEVIREGSGDLSIL 265
BLAST of mRNA_P-wetherbeei_contig112.2.2 vs. uniprot
Match: A0A7S0EEL6_9CRYP (Threonylcarbamoyl-AMP synthase n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0EEL6_9CRYP) HSP 1 Score: 183 bits (464), Expect = 1.350e-50 Identity = 102/276 (36.96%), Postives = 160/276 (57.97%), Query Frame = 1
Query: 67 LRPSPSQIPSVTVMKLRGATKTPPA-ILVEVERLNPIEAEAWKLQPVIDILRDGGVGIIPTDTSFAFVCDVHSRQGVEKIFQLKNVQR-QRKPLSLLCKDISTIAKYTAGIN-KNIFRILKATLPGPYTFILPATHEVPKVFLEHKHHSRTWKRREVGVRMPDDPICLEILRSLESPLLCGSVPKGPAGAPDAAAEAIAAAARGEDEAAEAEADLLWASPSRLANEPAVIYERWKRNVDFIVDAGPIASDRLSTVVDIMGAAPVVLREGAGDVGVV 885
L PSP+ P+V+ + ++ + VE+E I AWKL PV IL++GG+GI+PTDTS+AFV + SR+GV +++ LK ++KP ++LC IS I+KYT IN K++F++LK LPGPYTFI P+T+++P++ ++HK H++ WKR+E+GVR+P D +CLE++ + +PLLC V K + ++ K +DF+V AG ++ ST+VD+ V+LREGAGD+ ++
Sbjct: 27 LPPSPTCRPAVSSLSRAAKSRQEAGPVFVEIE---DIGHGAWKLDPVAAILKEGGLGIVPTDTSYAFVTSIESREGVSRLYDLKQQDSIKKKPFAILCDSISQISKYTTAINFKSVFKMLKEVLPGPYTFICPSTNDLPRMIIDHKKHAKIWKRKEIGVRIPKDQVCLELISKVGTPLLCAGVHK----------------------------------TDEESFSVGHVFAENKNLIDFMVAAGERNAES-STIVDLTKEPAVILREGAGDIDIL 264
BLAST of mRNA_P-wetherbeei_contig112.2.2 vs. uniprot
Match: A0A7S2TTY3_9EUKA (Threonylcarbamoyl-AMP synthase n=2 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TTY3_9EUKA) HSP 1 Score: 181 bits (458), Expect = 1.600e-50 Identity = 95/236 (40.25%), Postives = 145/236 (61.44%), Query Frame = 1
Query: 115 RGATKTPPAIL---VEVERLNPIEAEAWKLQPVIDILRDGGVGIIPTDTSFAFVCDVHSRQGVEKIFQLKNVQRQ-RKPLSLLCKDISTIAKYTAGI-NKNIFRILKATLPGPYTFILPATHEVPKVFLEHKHHSRTWKRREVGVRMPDDPICLEILRSLESPLLCGSVPKGPAGAPDAAAEAIAAAARGEDEAAEAEADLLWASPSRLANEPAVIYERWKRNVDFIVDAGPIASD 807
R T+TP A +EVE E + WKL + +++GG+ ++PTD+ +AFV DV+S++ V++I+ LKN+ + +KPLSLLC IS I+ YT+G+ +K F+ILK+TLPGPYT+ILPA++++P++ LEHK H + WKR+E+GVR+PDDP+C E L+ + +P+LC SVP + ++LA E + I W VDFI+D G ++D
Sbjct: 11 RRLTRTPRAKYAPTIEVEG----EWDFWKLDSAVKAVKEGGIVVLPTDSCYAFVADVNSKEAVQRIYALKNIDPETKKPLSLLCHSISQISDYTSGMQSKAAFKILKSTLPGPYTYILPASNKLPRMILEHKEHKKVWKRKEIGVRVPDDPVCQEFLKLIGNPVLCSSVP-------------------------------IDTETNKLAVEGSEIERAWAHRVDFIIDNGAHSAD 211
BLAST of mRNA_P-wetherbeei_contig112.2.2 vs. uniprot
Match: A0A7S3Z127_9EUKA (Threonylcarbamoyl-AMP synthase n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z127_9EUKA) HSP 1 Score: 183 bits (464), Expect = 2.890e-50 Identity = 97/239 (40.59%), Postives = 149/239 (62.34%), Query Frame = 1
Query: 175 EAEAWKLQPVIDILRDGGVGIIPTDTSFAFVCDVHSRQGVEKIFQLKNVQRQ-RKPLSLLCKDISTIAKYTAGI-NKNIFRILKATLPGPYTFILPATHEVPKVFLEHKHHSRTWKRREVGVRMPDDPICLEILRSLESPLLCGSVPKGPAGAPDAAAEAIAAAARGEDEAAEAEADLLWASPSRLANEPAVIYERWKRNVDFIVDAGPIASDRLSTVVDI-MGAAPVVLREGAGDVGV 882
E + WKL + ++DGG+ ++PTD+ +AFV DV+S++ V++I+ LKN+ + +KPLSLLC IS I+ +T+G+ +K F+ILK+TLPGPYT+ILPA++++P++ LEHK H + WKR+E+GVR+P D +C E L+ + +P+LC SVP ++LA E + I W VDFI+D G ++ +TVVD+ + VLREGAG+VG+
Sbjct: 85 EWDFWKLDSAVKAVKDGGIVVLPTDSCYAFVADVNSKEAVQRIYALKNIDPETKKPLSLLCHSISQISDFTSGMQSKAAFKILKSTLPGPYTYILPASNKLPRMILEHKEHKKVWKRKEIGVRVPQDSVCQEFLKLMGNPVLCSSVPSD-------------------------------TESNQLAVEGSEIERTWAHRVDFIIDNGYRQTEP-TTVVDMTIEDGLKVLREGAGEVGI 291
BLAST of mRNA_P-wetherbeei_contig112.2.2 vs. uniprot
Match: L1JNX7_GUITC (Threonylcarbamoyl-AMP synthase n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JNX7_GUITC) HSP 1 Score: 177 bits (448), Expect = 2.470e-48 Identity = 98/259 (37.84%), Postives = 150/259 (57.92%), Query Frame = 1
Query: 115 RGATKTPPAILVEVERLNPIEAEAWKLQPVIDILRDGGVGIIPTDTSFAFVCDVHSRQGVEKIFQLKNVQR-QRKPLSLLCKDISTIAKYTAGIN-KNIFRILKATLPGPYTFILPATHEVPKVFLEHKHHSRTWKRREVGVRMPDDPICLEILRSLESPLLCGSVPKGPAGAPDAAAEAIAAAARGEDEAAEAEADLLWASPSRLANEPAVIYERWKRNVDFIVDAGPIASDRLSTVVDIMGAAPVVLREGAGDVGVV 885
R A P A V VE + I AW+L + + LR+GG+GIIPTDTS+AFV + SR GV ++++LK ++KP S+LC IS I+KYT IN K++F++LK LPGPYTFI P+T+++P++ ++HK H++ WKR+E+GVR+P D +CL+++ + +PLLC V K + ++ + +DF+V AG ++ ST+VD+ V+LREGAG+V V+
Sbjct: 36 RSAKSKPAASPVFVE-IEDIGHSAWRLDSIAETLREGGLGIIPTDTSYAFVTSIESRDGVSRLYELKQQDSIKKKPFSILCDSISQISKYTTAINFKSVFKMLKEVLPGPYTFICPSTNDLPRMIIDHKKHAKIWKRKEIGVRIPKDEVCLQLIGKVGTPLLCAGVHK----------------------------------TDEESYSIGHVFAENENLIDFMVAAGERNAES-STIVDLTKEPAVILREGAGNVEVL 258
BLAST of mRNA_P-wetherbeei_contig112.2.2 vs. uniprot
Match: M1VEW8_CYAM1 (Threonylcarbamoyl-AMP synthase n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1VEW8_CYAM1) HSP 1 Score: 176 bits (447), Expect = 5.440e-48 Identity = 111/264 (42.05%), Postives = 150/264 (56.82%), Query Frame = 1
Query: 94 SVTVMKLRGATKTPPAILVEVERLNPIEAEAWKLQPVIDILRD---GGVGIIPTDTSFAFVCDVHSRQGVEKIFQLKNVQRQ-RKPLSLLCKDISTIAKYTAGINKNIFRILKATLPGPYTFILPATHEVPKVFLEHKHHSRTWKRREVGVRMPDDPICLEILRSLES-PLLCGSVPKGPAGAPDAAAEAIAAAARGEDEAAEAEADLLWASPSRLANEPAVIYERWKRNVDFIVDAGPIASDRLSTVVDIMGAAPVVLREGAG 870
S+T + R +K P + VEV + W+LQ V ++LRD G VGI+PTDTS+AFVC++HSR GVE+I+ LK RKPLSLLC++ + I +Y ++K F++LKA LPGPYTFILPATHEVP+V +E++ H + WKRRE+GVR P DP C + +L+ LL SVP +DE E D + + E W+ VDF+++AG STVVD+ V LREG G
Sbjct: 25 SLTSGRHRADSKRDPFLYVEVSGDGD---DVWRLQNVFELLRDPSRGVVGILPTDTSYAFVCNLHSRTGVERIYSLKKTPPSVRKPLSLLCRNHAAIQRYALVLDKRTFKVLKALLPGPYTFILPATHEVPRVMIENRVHRKMWKRREIGVRWPRDPYCQAAMDALDGVALLASSVP--------------------DDEVEEDGVDRDYLR----------MLEHWEHEVDFMINAGARTIGLKSTVVDVTRGWRV-LREGLG 254 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig112.2.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig112.2.2 >prot_P-wetherbeei_contig112.2.2 ID=prot_P-wetherbeei_contig112.2.2|Name=mRNA_P-wetherbeei_contig112.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=292bp MLPLVSTLVVRSTALRPSPSQIPSVTVMKLRGATKTPPAILVEVERLNPIback to top mRNA from alignment at P-wetherbeei_contig112:868..3064+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig112.2.2 ID=mRNA_P-wetherbeei_contig112.2.2|Name=mRNA_P-wetherbeei_contig112.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2197bp|location=Sequence derived from alignment at P-wetherbeei_contig112:868..3064+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig112:868..3064+ >mRNA_P-wetherbeei_contig112.2.2 ID=mRNA_P-wetherbeei_contig112.2.2|Name=mRNA_P-wetherbeei_contig112.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=876bp|location=Sequence derived from alignment at P-wetherbeei_contig112:868..3064+ (Phaeothamnion wetherbeei SAG_119_79)back to top |