mRNA_P-wetherbeei_contig11012.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig11012.1.1 vs. uniprot
Match: A0A7S3ZPQ8_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZPQ8_9STRA) HSP 1 Score: 305 bits (781), Expect = 1.200e-101 Identity = 151/224 (67.41%), Postives = 188/224 (83.93%), Query Frame = 1
Query: 1 MNIFRFFGDLSHVASIVVLLLRLKAAKSAAGISLKTQELFLLVFVCRYLDLFTTYYSLYNSLMKVLYLSSTSYIVYMIRYQLPIKATYDRSQDSFLHVKFAVAPCAVIAFFTTVMWSGFRPLEVRERMIWEFSIWLEAVAIVPQLIVLQRFGEVENLTAHYVFLMGAYRALYILNWAYRANFERGYRHNWVVYIAGVVQTALFADFFYYYFLSKYRGGRLSLPS 672
MNIFRF GD+SHV SI+VLLLRL+++KSA GISLKTQELFL+VFV RYLDLFTT+YSLYNS MKV Y++ST+YI++MIR+Q P K+ YD SQDSFLH+KFAVAPCA +A F ++ P+++ +W FSI+LEA+AIVPQL VLQR+ EVENLT HYVF +GAYR LYILNW YR+ +E+ YRHNW+VY++G VQTAL+ DFFYYY +SKY GG+L+LP+
Sbjct: 74 MNIFRFAGDMSHVVSILVLLLRLRSSKSAVGISLKTQELFLIVFVTRYLDLFTTFYSLYNSFMKVAYIASTTYIIWMIRFQEPYKSKYDASQDSFLHIKFAVAPCAGLALFACLVKGELSPIDI----LWTFSIFLEALAIVPQLFVLQRYREVENLTGHYVFFLGAYRGLYILNWVYRSYYEQFYRHNWLVYVSGAVQTALYVDFFYYYVVSKYYGGKLTLPT 293
BLAST of mRNA_P-wetherbeei_contig11012.1.1 vs. uniprot
Match: A0A835Z6E1_9STRA (ER lumen protein retaining receptor-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6E1_9STRA) HSP 1 Score: 301 bits (770), Expect = 4.570e-101 Identity = 153/224 (68.30%), Postives = 192/224 (85.71%), Query Frame = 1
Query: 1 MNIFRFFGDLSHVASIVVLLLRLKAAKSAAGISLKTQELFLLVFVCRYLDLFTTYYSLYNSLMKVLYLSSTSYIVYMIRYQLPIKATYDRSQDSFLHVKFAVAPCAVIAFFTTVMWSGFRPLEVRERMIWEFSIWLEAVAIVPQLIVLQRFGEVENLTAHYVFLMGAYRALYILNWAYRANFERGYRHNWVVYIAGVVQTALFADFFYYYFLSKYRGGRLSLPS 672
MNIFR GDL H+ASI++LLL+L+A+K+A+GISLKTQELFL VFVCRYLDLFTT+YS+YNS+MKVLY++ T+ I++M+R Q PI+ TYD SQD+FLHVK+AVAPCA +A T ++ GF +VR+ + W FSI+LEA+AIVPQLIVLQR+ EVENLT HY+F +GAYRALYILNW YR+ ERGY+H++VVY AG+VQTAL+ DFFYYY +SKYRGG+ SLPS
Sbjct: 1 MNIFRLVGDLCHLASILLLLLKLRASKNASGISLKTQELFLAVFVCRYLDLFTTFYSVYNSVMKVLYIALTALIIHMMRAQSPIRGTYDASQDTFLHVKYAVAPCAALAALTMLV-QGF---DVRD-LFWNFSIYLEAIAIVPQLIVLQRYREVENLTGHYIFFLGAYRALYILNWIYRSFHERGYKHHYVVYFAGIVQTALYVDFFYYYAISKYRGGKFSLPS 219
BLAST of mRNA_P-wetherbeei_contig11012.1.1 vs. uniprot
Match: F0YI66_AURAN (Uncharacterized protein n=2 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YI66_AURAN) HSP 1 Score: 298 bits (762), Expect = 7.800e-100 Identity = 146/224 (65.18%), Postives = 187/224 (83.48%), Query Frame = 1
Query: 1 MNIFRFFGDLSHVASIVVLLLRLKAAKSAAGISLKTQELFLLVFVCRYLDLFTTYYSLYNSLMKVLYLSSTSYIVYMIRYQLPIKATYDRSQDSFLHVKFAVAPCAVIAFFTTVMWSGFRPLEVRERMIWEFSIWLEAVAIVPQLIVLQRFGEVENLTAHYVFLMGAYRALYILNWAYRANFERGYRHNWVVYIAGVVQTALFADFFYYYFLSKYRGGRLSLPS 672
MN+FRF GD+SHV SI+VL+LRL+ +KSA GISLKTQELFL+VF+ RYLDLFTT+YS+YNS MKV Y+++T+ I+YMIR++ P K+ YD+SQDSFLH KFAVAPCA++A F+ ++ P++V +W FSI+LEA+AIVPQL VLQR+ EVENLT HYVF +GAYR LYILNW YR+ +E YRHNW+VYI+G +QTAL+ DFFYYY +SKY GG+L+LP+
Sbjct: 1 MNLFRFAGDMSHVVSIIVLILRLRVSKSAVGISLKTQELFLIVFMTRYLDLFTTFYSMYNSFMKVAYITATASIIYMIRFKEPYKSKYDKSQDSFLHFKFAVAPCAMLALFSCLIKRELNPVDV----LWTFSIFLEALAIVPQLFVLQRYREVENLTGHYVFFLGAYRFLYILNWVYRSYYEPFYRHNWLVYISGAIQTALYVDFFYYYIVSKYYGGKLTLPT 220
BLAST of mRNA_P-wetherbeei_contig11012.1.1 vs. uniprot
Match: A0A7S2BQB3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BQB3_9STRA) HSP 1 Score: 292 bits (748), Expect = 1.130e-97 Identity = 150/224 (66.96%), Postives = 180/224 (80.36%), Query Frame = 1
Query: 1 MNIFRFFGDLSHVASIVVLLLRLKAAKSAAGISLKTQELFLLVFVCRYLDLFTTYYSLYNSLMKVLYLSSTSYIVYMIRYQLPIKATYDRSQDSFLHVKFAVAPCAVIAFFTTVMWSGFRPLEVRERMIWEFSIWLEAVAIVPQLIVLQRFGEVENLTAHYVFLMGAYRALYILNWAYRANFERGYRHNWVVYIAGVVQTALFADFFYYYFLSKYRGGRLSLPS 672
MNIFR GDLSHV SI +LLLRL K A GIS+KTQELFL+VFV RYLDLFTTYYSLYNS+MK+LY+S+TSYIVYMIRY+ P ++ YD SQDSFLH+KFAV PC ++A T + + +E ++W FSI+LEAVAIVPQLI LQRF EVENLT+HY+FL+G YRALYILNW YR+ +E Y HNW+VYIAG+ QT L+ DFFYYY +SKY GG ++LPS
Sbjct: 3 MNIFRLAGDLSHVLSIFILLLRLITTKQATGISVKTQELFLIVFVTRYLDLFTTYYSLYNSVMKMLYISTTSYIVYMIRYKEPYRSKYDSSQDSFLHMKFAVLPCFLLAGITQLYRGEYEVIE----LLWCFSIYLEAVAIVPQLITLQRFREVENLTSHYIFLIGIYRALYILNWIYRSYYEPFYVHNWIVYIAGIAQTLLYMDFFYYYIISKYYGGNMTLPS 222
BLAST of mRNA_P-wetherbeei_contig11012.1.1 vs. uniprot
Match: A0A1Z5KJM8_FISSO (ER lumen protein retaining receptor n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KJM8_FISSO) HSP 1 Score: 290 bits (741), Expect = 1.600e-96 Identity = 147/224 (65.62%), Postives = 185/224 (82.59%), Query Frame = 1
Query: 1 MNIFRFFGDLSHVASIVVLLLRLKAAKSAAGISLKTQELFLLVFVCRYLDLFTTYYSLYNSLMKVLYLSSTSYIVYMIRYQLPIKATYDRSQDSFLHVKFAVAPCAVIAFFTTVMWSGFRPLEVRERMIWEFSIWLEAVAIVPQLIVLQRFGEVENLTAHYVFLMGAYRALYILNWAYRANFERGYRHNWVVYIAGVVQTALFADFFYYYFLSKYRGGRLSLPS 672
MNIFR GD+SHV SI+VLLLRL+ AK+A GIS++T ELFL+VF+ RYLDLFTT+YSLYNS+MK+LY+ ST+ I+Y I++Q PIK+TYD+SQDSFL+ +FAVAPCAV+A T ++ SG E ++W FSI+LE++AI+PQLIVLQR+ EVENLT +Y+F MGAYR LYILNW YRANFE Y+H+WVVYI GV+QT L+ DFFYYYF SK GGR +LP+
Sbjct: 3 MNIFRLAGDMSHVFSILVLLLRLRVAKNAQGISVRTHELFLIVFLTRYLDLFTTFYSLYNSIMKILYIVSTASIIYTIKFQEPIKSTYDKSQDSFLYWQFAVAPCAVLASVTHLIGSGISGFSFIE-LLWTFSIYLESIAILPQLIVLQRYREVENLTGNYIFFMGAYRFLYILNWIYRANFEAHYQHHWVVYICGVLQTLLYVDFFYYYFKSKKSGGRFTLPT 225
BLAST of mRNA_P-wetherbeei_contig11012.1.1 vs. uniprot
Match: A0A7S1UWG6_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UWG6_9STRA) HSP 1 Score: 290 bits (743), Expect = 1.620e-96 Identity = 145/224 (64.73%), Postives = 183/224 (81.70%), Query Frame = 1
Query: 1 MNIFRFFGDLSHVASIVVLLLRLKAAKSAAGISLKTQELFLLVFVCRYLDLFTTYYSLYNSLMKVLYLSSTSYIVYMIRYQLPIKATYDRSQDSFLHVKFAVAPCAVIAFFTTVMWSGFRPLEVRERMIWEFSIWLEAVAIVPQLIVLQRFGEVENLTAHYVFLMGAYRALYILNWAYRANFERGYRHNWVVYIAGVVQTALFADFFYYYFLSKYRGGRLSLPS 672
MNIFR GD+SHV SI+VLLLRL+ AK+A GIS++T ELFL VFV RYLDLFTT+YS YNS+MK+LY+ ST+ I+Y I++Q PIK+TYD++QD+FLH KFAVAPCA++AF T ++ SG E+ E ++W FSI+LE++AI+PQLIVLQR+ EVENLT ++VF MGAYR LYILNW YRA+ E GY+H+WVVY GV+QT L+ADFFYYY S GGR LP+
Sbjct: 23 MNIFRLAGDMSHVFSIIVLLLRLRVAKNAQGISVRTHELFLCVFVTRYLDLFTTFYSFYNSIMKILYIGSTASIIYTIKFQEPIKSTYDKAQDTFLHWKFAVAPCAIVAFLTHMIGSGIAKFELME-LLWTFSIYLESIAILPQLIVLQRYREVENLTGNFVFFMGAYRFLYILNWIYRAHTEHGYKHHWVVYFCGVLQTLLYADFFYYYVKSVRSGGRFKLPT 245
BLAST of mRNA_P-wetherbeei_contig11012.1.1 vs. uniprot
Match: A0A7R9ZM06_9STRA (Hypothetical protein n=2 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZM06_9STRA) HSP 1 Score: 290 bits (743), Expect = 3.520e-96 Identity = 143/223 (64.13%), Postives = 185/223 (82.96%), Query Frame = 1
Query: 1 MNIFRFFGDLSHVASIVVLLLRLKAAKSAAGISLKTQELFLLVFVCRYLDLFTTYYSLYNSLMKVLYLSSTSYIVYMIRYQLPIKATYDRSQDSFLHVKFAVAPCAVIAFFTTVMWSGFRPLEVRERMIWEFSIWLEAVAIVPQLIVLQRFGEVENLTAHYVFLMGAYRALYILNWAYRANFERGYRHNWVVYIAGVVQTALFADFFYYYFLSKYRGGRLSLP 669
MNIFRF GD+SH+ SI+VLLLRL+ A++A GIS+++ ELFL VFV RYLDLF +YS+YNS+MK++Y+ ST+ I+Y I+Y+ PIK+TYD+SQD+FLH +FAVAPCA+IAF T ++ G + + E ++W FSI+LEA+AI+PQLIVLQR+ EVENLT +Y+F MGAYRALYILNW YRAN E+GY+H+WVVY GV+QT L+ADFFYYY +K RG RL LP
Sbjct: 48 MNIFRFLGDMSHLFSIIVLLLRLRVARNAQGISVRSHELFLCVFVTRYLDLFFRFYSIYNSVMKIIYIGSTASIIYTIKYKEPIKSTYDKSQDTFLHWRFAVAPCAIIAFATHMIAKGMKGFDAIE-LLWMFSIYLEAIAILPQLIVLQRYKEVENLTGNYIFFMGAYRALYILNWIYRANTEKGYKHHWVVYFCGVLQTLLYADFFYYYIKAKARGNRLQLP 269
BLAST of mRNA_P-wetherbeei_contig11012.1.1 vs. uniprot
Match: A0A1E7FS83_9STRA (KDEL receptor A n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FS83_9STRA) HSP 1 Score: 288 bits (738), Expect = 4.430e-96 Identity = 143/224 (63.84%), Postives = 183/224 (81.70%), Query Frame = 1
Query: 1 MNIFRFFGDLSHVASIVVLLLRLKAAKSAAGISLKTQELFLLVFVCRYLDLFTTYYSLYNSLMKVLYLSSTSYIVYMIRYQLPIKATYDRSQDSFLHVKFAVAPCAVIAFFTTVMWSGFRPLEVRERMIWEFSIWLEAVAIVPQLIVLQRFGEVENLTAHYVFLMGAYRALYILNWAYRANFERGYRHNWVVYIAGVVQTALFADFFYYYFLSKYRGGRLSLPS 672
MNIFRF GD+SH+ SI+VLLLRL+ AK+A GIS+KT EL+LLVF+ RYLDLFTT+YS YNS+MK++Y+++T+ IVY I++Q PIK+TY++ QDSFLH +FA PCAV+AF T ++ SG E ++W FSI+LE + I+PQL+VLQR+ EVENLT +YVF MGAYRALYILNW YRAN E+ YRH+WVVYI G +QT L+ADFFYYY SK +GG+ SLP+
Sbjct: 1 MNIFRFCGDMSHLFSIIVLLLRLRVAKNAQGISVKTHELYLLVFLTRYLDLFTTFYSAYNSVMKLVYIAATASIVYTIKFQEPIKSTYEKGQDSFLHWQFAAIPCAVLAFITHLIGSGIADFNFME-LLWTFSIYLECLTIMPQLVVLQRYREVENLTGNYVFFMGAYRALYILNWIYRANTEKNYRHHWVVYICGTIQTLLYADFFYYYLKSKAKGGKFSLPT 223
BLAST of mRNA_P-wetherbeei_contig11012.1.1 vs. uniprot
Match: A0A7S2SR11_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SR11_9STRA) HSP 1 Score: 285 bits (729), Expect = 3.850e-94 Identity = 142/224 (63.39%), Postives = 176/224 (78.57%), Query Frame = 1
Query: 1 MNIFRFFGDLSHVASIVVLLLRLKAAKSAAGISLKTQELFLLVFVCRYLDLFTTYYSLYNSLMKVLYLSSTSYIVYMIRYQLPIKATYDRSQDSFLHVKFAVAPCAVIAFFTTVMWSGFRPLEVRERMIWEFSIWLEAVAIVPQLIVLQRFGEVENLTAHYVFLMGAYRALYILNWAYRANFERGYRHNWVVYIAGVVQTALFADFFYYYFLSKYRGGRLSLPS 672
MN+FR GDLSHV SI +LLLRL + + AAGISLKTQELFL+VF+CRYLDLFTT+ S YN++MK+LY+ ST YIVYMIRY+ P ++ YD SQD+F HVK +APC V+A T + F + ++W FSI+LEA+AI+PQLIVL R+GEVENLT HY+F +GAYRALYILNW YR+ +E+GY HNW YIAG QTAL+ DFFYYY +SKY GG++ LPS
Sbjct: 47 MNVFRAAGDLSHVISIFMLLLRLISTQQAAGISLKTQELFLVVFLCRYLDLFTTFISWYNTIMKILYICSTGYIVYMIRYKEPFRSKYDVSQDTFAHVKIGIAPCMVLAMLTMLFQWSFDIFD----LLWIFSIYLEAIAILPQLIVLHRYGEVENLTGHYIFFLGAYRALYILNWIYRSYYEKGYHHNWPGYIAGACQTALYVDFFYYYIISKYYGGKMKLPS 266
BLAST of mRNA_P-wetherbeei_contig11012.1.1 vs. uniprot
Match: A0A7S2XZQ8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZQ8_9STRA) HSP 1 Score: 281 bits (718), Expect = 3.840e-93 Identity = 147/220 (66.82%), Postives = 176/220 (80.00%), Query Frame = 1
Query: 1 MNIFRFFGDLSHVASIVVLLLRLKAAKSAAGISLKTQELFLLVFVCRYLDLFTTYYSLYNSLMKVLYLSSTSYIVYMIRYQLPIKATYDRSQDSFLHVKFAVAPCAVIAFFTTVMWSGFRPLEVRERMIWEFSIWLEAVAIVPQLIVLQRFGEVENLTAHYVFLMGAYRALYILNWAYRANFERGYRHNWVVYIAGVVQTALFADFFYYYFLSKYRGGRL 660
MN+FR GDLSH ASI++LL RL+ +KSA GISLKTQELFL+VF+CRYLDLFTT+ SLYNS+MKVLY+SSTSYI+YM+R KATYD+ QDSFLH+ FAV PC V+A T ++ GF E M+W FSI+LEA AI+PQL+VLQR+ EVENLT +YVFL+G YRALYI+NW YRA E YRH++V Y AGVVQTAL+ DFFYYY LSK +GG L
Sbjct: 3 MNLFRLAGDLSHAASIIILLQRLRTSKSALGISLKTQELFLIVFLCRYLDLFTTFISLYNSVMKVLYISSTSYIIYMMRMLPTYKATYDKDQDSFLHIYFAVVPCLVLALITNLV-QGFDFTE----MLWIFSIYLEATAIIPQLVVLQRYREVENLTGNYVFLLGCYRALYIMNWVYRAYHEAHYRHSYVAYAAGVVQTALYVDFFYYYALSKAKGGTL 217 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11012.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig11012.1.1 >prot_P-wetherbeei_contig11012.1.1 ID=prot_P-wetherbeei_contig11012.1.1|Name=mRNA_P-wetherbeei_contig11012.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=225bp MNIFRFFGDLSHVASIVVLLLRLKAAKSAAGISLKTQELFLLVFVCRYLDback to top mRNA from alignment at P-wetherbeei_contig11012:175..1515- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig11012.1.1 ID=mRNA_P-wetherbeei_contig11012.1.1|Name=mRNA_P-wetherbeei_contig11012.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1341bp|location=Sequence derived from alignment at P-wetherbeei_contig11012:175..1515- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig11012:175..1515- >mRNA_P-wetherbeei_contig11012.1.1 ID=mRNA_P-wetherbeei_contig11012.1.1|Name=mRNA_P-wetherbeei_contig11012.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=675bp|location=Sequence derived from alignment at P-wetherbeei_contig11012:175..1515- (Phaeothamnion wetherbeei SAG_119_79)back to top |