mRNA_P-wetherbeei_contig10990.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig10990.1.2 vs. uniprot
Match: A0A6H5JII2_9PHAE (Cytosolic Fe-S cluster assembly factor NUBP1 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JII2_9PHAE) HSP 1 Score: 184 bits (467), Expect = 1.440e-52 Identity = 93/160 (58.13%), Postives = 119/160 (74.38%), Query Frame = 3
Query: 252 LSF*QYLKGVKVDGAVLVTTPQEVAMADVRKEINFCKKTGISVLGVVENMSVMHLPLGEAAFTD-ASGQDVTATVRAVLAEKCPEALAAVLRLDVFAAFRGGPRAMAEAGGVPYLGQIPLDPNLLKACEEGVSFVEAYPTSPAAKPFAAVVDVILQATQD 728
+S +YL G VDGAV+VTTPQEVAMADVRKE++FC+KTG++VLGVVENMS + +P+ E F D A+G+D T + RA+L EK P+ L + + VF +F GPR MAE+ GVP+LG IP+DPNLLKACEEG +F Y SPAAKPF +V ++ AT D
Sbjct: 202 MSVVKYLGGCNVDGAVVVTTPQEVAMADVRKELSFCRKTGLNVLGVVENMSGLTVPVSELLFVDKATGEDKTESARAILREKAPQLLELIAQTTVFTSFGKGPRGMAESYGVPFLGSIPMDPNLLKACEEGEAFTTMYAESPAAKPFVKIVGAVVDATPD 361
BLAST of mRNA_P-wetherbeei_contig10990.1.2 vs. uniprot
Match: A0A835ZEQ2_9STRA (Cytosolic Fe-S cluster assembly factor NUBP1 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEQ2_9STRA) HSP 1 Score: 177 bits (449), Expect = 4.950e-50 Identity = 94/154 (61.04%), Postives = 112/154 (72.73%), Query Frame = 3
Query: 264 QYLKGVKVDGAVLVTTPQEVAMADVRKEINFCKKTGISVLGVVENMSVMHLPLGEAAFTDASGQDVTATVRAVLAEKCPEALAAVLRLDVFAAFRGGPRA-MAEAGGVPYLGQIPLDPNLLKACEEGVSFVEAYPTSPAAKPFAAVVDVILQAT 722
QYLKG VDGAV+V+T QEV++ADVRKEINFCKKT I VLGVV NM+ + P+ + AF +A G D TA A L+ P L+ + DVF A GG A MA GVPYLG +PLDPNLL+ACEEG SF+EAYP S AAKPFAA+VD +L+AT
Sbjct: 188 QYLKGCNVDGAVIVSTNQEVSLADVRKEINFCKKTSIKVLGVVGNMAALKFPVSQLAFRNAEGGDCTAEAMAALSAHAPHLLSMSVAADVFVAAEGGGAAGMAAKTGVPYLGPVPLDPNLLRACEEGRSFLEAYPMSAAAKPFAAIVDGVLKAT 341
BLAST of mRNA_P-wetherbeei_contig10990.1.2 vs. uniprot
Match: A0A024GTL4_9STRA (Cytosolic Fe-S cluster assembly factor NUBP1 homolog n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GTL4_9STRA) HSP 1 Score: 167 bits (424), Expect = 2.100e-46 Identity = 82/159 (51.57%), Postives = 113/159 (71.07%), Query Frame = 3
Query: 252 LSF*QYLKGVKVDGAVLVTTPQEVAMADVRKEINFCKKTGISVLGVVENMSVMHLPLGEAAFTDASGQDVTATVRAVLAEKCPEALAAVLRLDVFAAFRGGPRAMAEAGGVPYLGQIPLDPNLLKACEEGVSFVEAYPTSPAAKPFAAVVDVILQATQD 728
+S QY+K +DGAV+VTTPQEVA+ DVRKE+NFC+KT + VLGV+ENMS + P+ E F D SG D T V+ VL P+AL +++ VF + GG +AMA+A VP+LG++PLDPN+ ACE+G+SFVEA+PTS A+ F +V+ +L Q+
Sbjct: 185 ISVVQYMKEADLDGAVVVTTPQEVALMDVRKELNFCRKTNVRVLGVIENMSALERPIREVKFLDTSGIDATEIVKKVLQTHAPQALDYLIQTQVFPSTNGGAKAMADAFQVPFLGRLPLDPNMTNACEDGISFVEAFPTSSASASFQTIVNTLLSFIQN 343
BLAST of mRNA_P-wetherbeei_contig10990.1.2 vs. uniprot
Match: F0WZ07_9STRA (Cytosolic Fe-S cluster assembly factor NUBP1 homolog n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WZ07_9STRA) HSP 1 Score: 164 bits (415), Expect = 4.520e-44 Identity = 79/151 (52.32%), Postives = 108/151 (71.52%), Query Frame = 3
Query: 252 LSF*QYLKGVKVDGAVLVTTPQEVAMADVRKEINFCKKTGISVLGVVENMSVMHLPLGEAAFTDASGQDVTATVRAVLAEKCPEALAAVLRLDVFAAFRGGPRAMAEAGGVPYLGQIPLDPNLLKACEEGVSFVEAYPTSPAAKPFAAVVD 704
+S QY+K +DGAV+VTTPQEVA+ DVRKE+NFC+KT + VLGV+ENMS P+ F D +G D T V+ VL E P+AL +++ VF + GG +AMAEA VP+LG++PLDPN+ ACE+G+SF+EA+PTS A+ F +V+
Sbjct: 278 ISVVQYMKEADLDGAVVVTTPQEVALMDVRKELNFCRKTNVRVLGVIENMSAFERPISSVKFLDTAGMDATEIVQKVLREHAPQALEYLMQTQVFPSSNGGAKAMAEAFQVPFLGRLPLDPNMTGACEDGISFIEAFPTSSASASFRTIVN 428
BLAST of mRNA_P-wetherbeei_contig10990.1.2 vs. uniprot
Match: A0A7S2UWA7_9STRA (Cytosolic Fe-S cluster assembly factor NUBP1 homolog n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWA7_9STRA) HSP 1 Score: 162 bits (409), Expect = 7.210e-44 Identity = 85/158 (53.80%), Postives = 109/158 (68.99%), Query Frame = 3
Query: 252 LSF*QYLKGVKVDGAVLVTTPQEVAMADVRKEINFCKKTGISVLGVVENMSVMHLPLGEAAFTDASGQDVTATVRAVLAEKCPEALAAVLRLDVFAAFRGGPRAMAEAGGVPYLGQIPLDPNLLKACEEGVSFVEAYPTSPAAKPFAAVVDVILQATQ 725
+S QYLKG DGAV+VTTPQEVAMADVRKE++FC KTGI VLG+VENM+ LPL E F D + +D T V AVL + P+ L + + F AF GP+ MA+ GVP+LG++PLDPNLLKACE G SF+ YP S AA+P +V+ ++ +
Sbjct: 190 ISIVQYLKGCAADGAVVVTTPQEVAMADVRKELSFCSKTGIRVLGLVENMAASSLPLTELTFQDGA-EDRTEEVFAVLRQVAPQLLDLKVSFNPFPAFGEGPQGMAQKFGVPFLGKVPLDPNLLKACEAGGSFLSLYPNSTAARPLGLIVEKLVNTVE 346
BLAST of mRNA_P-wetherbeei_contig10990.1.2 vs. uniprot
Match: A0A662WGW0_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WGW0_9STRA) HSP 1 Score: 153 bits (387), Expect = 3.250e-43 Identity = 80/148 (54.05%), Postives = 103/148 (69.59%), Query Frame = 3
Query: 264 QYLKGVKVDGAVLVTTPQEVAMADVRKEINFCKKTGISVLGVVENMSVMHLPLGEAAFTDASGQDVTATVRAVLAEKCPEALAAVLRLDVFAAFRGGPRAMAEAGGVPYLGQIPLDPNLLKACEEGVSFVEAYPTSPAAKPFAAVVDV 707
QY+K +DGAV+VTTPQEVA++DVRKE+NFC+KT I+VLGVVENMS + L + F A G D TA +L EK PE L ++++VF A GG AMA+ VP+LG++PLD + ACEEGVSF+E YP S AA F+ +V V
Sbjct: 4 QYMKEADLDGAVVVTTPQEVALSDVRKELNFCRKTNINVLGVVENMSGVQRRLEDVKFVGADGDDQTAAFMKLLQEKAPELLQHSVQMEVFPAANGGGEAMAKKFNVPFLGRLPLDEKMTGACEEGVSFLEEYPDSVAAPAFSKIVQV 151
BLAST of mRNA_P-wetherbeei_contig10990.1.2 vs. uniprot
Match: B8BZX8_THAPS (Cytosolic Fe-S cluster assembly factor NUBP1 homolog n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZX8_THAPS) HSP 1 Score: 160 bits (405), Expect = 3.350e-43 Identity = 84/153 (54.90%), Postives = 108/153 (70.59%), Query Frame = 3
Query: 291 GAVLVTTPQEVAMADVRKEINFCKKTGISVLGVVENMSVMHLPLGEAAF--TDASG--------QDVTATVRAVLAEKCPEALAAVLRLDVFAAFRGGPRAMAEAGGVPYLGQIPLDPNLLKACEEGVSFVEAYPTSPAAKPFAAVVDVILQA 719
GA++VTTP+EV+MADVRKE+NFCKKT + VLG+VENMS + + + + F T+A+G D T V A+L EKCPE L+ + DVF A GPR MAE VPYLG++PLDPNLLKACEEG SFV+ +P+SPAA P +VD ++ A
Sbjct: 214 GAIVVTTPEEVSMADVRKELNFCKKTSVPVLGIVENMSGLQMKVSDLKFFRTNANGGVDTTSDSPDCTNDVMAMLREKCPELLSMIAATDVFPASGNGPRGMAERFNVPYLGKLPLDPNLLKACEEGASFVDKFPSSPAATPLNDIVDKLILA 366
BLAST of mRNA_P-wetherbeei_contig10990.1.2 vs. uniprot
Match: A0A7S2BTI7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BTI7_9STRA) HSP 1 Score: 155 bits (392), Expect = 3.530e-43 Identity = 82/151 (54.30%), Postives = 103/151 (68.21%), Query Frame = 3
Query: 252 LSF*QYLKGVKVDGAVLVTTPQEVAMADVRKEINFCKKTGISVLGVVENMSVMHLPLGEAAFTD-ASGQDVTATVRAVLAEKCPEALAAVLRLDVFAAFRGGPRAMAEAGGVPYLGQIPLDPNLLKACEEGVSFVEAYPTSPAAKPFAAVV 701
LS QYL+G +DGAV+VTTPQEVAM DVRKEINFC+KT + VLG+VENMS P+ F D +SG DVTA A++ KCPE L+ + +VF AF GP+ MA GV LG++PLD L+ ACE+G +FV AYP S A P ++V
Sbjct: 37 LSIIQYLRGSGIDGAVVVTTPQEVAMQDVRKEINFCRKTNVEVLGLVENMSGYQSPVSNLQFRDPSSGADVTAATMAMIQSKCPELLSVMAHAEVFPAFGDGPQGMAAKFGVDLLGKLPLDNQLMAACEQGQAFVTAYPDSIACAPLKSIV 187
BLAST of mRNA_P-wetherbeei_contig10990.1.2 vs. uniprot
Match: K3WSY8_GLOUD (Cytosolic Fe-S cluster assembly factor NUBP1 homolog n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WSY8_GLOUD) HSP 1 Score: 158 bits (400), Expect = 7.900e-43 Identity = 81/160 (50.62%), Postives = 110/160 (68.75%), Query Frame = 3
Query: 252 LSF*QYLKGVKVDGAVLVTTPQEVAMADVRKEINFCKKTGISVLGVVENMSVMHLPLGEAAFTDASGQDVTATVRAVLAEKCPEALAAVLRLDVFAAFRGGPRAMAEAGGVPYLGQIPLDPNLLKACEEGVSFVEAYPTSPAAKPFAAVVDVILQATQDK 731
+S QY+K +DGAV+VTTPQEVA++DVRKE+NFC+KT I+VLGVVENMS + L + F A G D TA +L +K PE L +R+DVF GG AMA+A GVP+LG++PLD + +ACEEG SF++ YP S AA F+ +V ++ + + K
Sbjct: 185 ISIVQYMKEADLDGAVVVTTPQEVALSDVRKELNFCRKTKINVLGVVENMSGVQRTLDDVKFIGADGVDQTAVFMQLLKDKAPELLQHSVRMDVFPTAAGGGEAMAKAFGVPFLGRLPLDDKMTRACEEGASFLDEYPDSVAAPAFSQIVQDVINSVEKK 344
BLAST of mRNA_P-wetherbeei_contig10990.1.2 vs. uniprot
Match: A0A485KZS6_9STRA (Cytosolic Fe-S cluster assembly factor NUBP1 homolog n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485KZS6_9STRA) HSP 1 Score: 160 bits (404), Expect = 8.320e-43 Identity = 91/163 (55.83%), Postives = 113/163 (69.33%), Query Frame = 3
Query: 252 LSF*QYLKGVKVDGAVLVTTPQEVAMADVRKEINFCKKTGISVLG---VVENMSVMHLPLGEAAFTD-ASGQDVTATVRAVLAEKCPEALAAVLRLDVFAAFRGGPRAMAEAGGVPYLGQIPLDPNLLKACEEGVSFVEAYPTSPAAKPFAAVVD-VILQATQ 725
+S QY+K +DGAV+VTTPQEVAMADVRKE+NFCKKTG+ VLG VVENM+ + PL F D A+ D T V VL K PE LA ++L VF GG AMA+A GVP+LG++PLD L ++CEEGV F+EAYPTS AA F+ ++D VI QA +
Sbjct: 247 ISIVQYMKETNIDGAVVVTTPQEVAMADVRKELNFCKKTGVPVLGYDDVVENMAGLEQPLTACNFVDPATATDHTQHVLEVLKAKAPELLAYAVQLQVFPPAAGGGEAMAKAFGVPFLGRLPLDQKLTQSCEEGVGFLEAYPTSSAANAFSGILDHVIAQANK 409 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10990.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig10990.1.2 >prot_P-wetherbeei_contig10990.1.2 ID=prot_P-wetherbeei_contig10990.1.2|Name=mRNA_P-wetherbeei_contig10990.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=136bp MADVRKEINFCKKTGISVLGVVENMSVMHLPLGEAAFTDASGQDVTATVRback to top mRNA from alignment at P-wetherbeei_contig10990:548..2148- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig10990.1.2 ID=mRNA_P-wetherbeei_contig10990.1.2|Name=mRNA_P-wetherbeei_contig10990.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1601bp|location=Sequence derived from alignment at P-wetherbeei_contig10990:548..2148- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig10990:548..2148- >mRNA_P-wetherbeei_contig10990.1.2 ID=mRNA_P-wetherbeei_contig10990.1.2|Name=mRNA_P-wetherbeei_contig10990.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=408bp|location=Sequence derived from alignment at P-wetherbeei_contig10990:548..2148- (Phaeothamnion wetherbeei SAG_119_79)back to top |