mRNA_P-wetherbeei_contig10689.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig10689.1.1
Unique NamemRNA_P-wetherbeei_contig10689.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig10689.1.1 vs. uniprot
Match: UPI0004A7656E (quinone-dependent dihydroorotate dehydrogenase n=1 Tax=Nevskia soli TaxID=418856 RepID=UPI0004A7656E)

HSP 1 Score: 286 bits (733), Expect = 9.900e-93
Identity = 151/284 (53.17%), Postives = 192/284 (67.61%), Query Frame = 1
Query:    4 NRIGLAAGFDKNGYFIDSAQALGFGHLEVGAITPRPQPGHPRPRLFRVPGKAALRNRMGFNNQGVEAIYPRLPATRGRIVVGINLGKGLDTPLENAQDDYLAVLRATYPRADYYSINISSPNTANLRQLGSGEALRALCRELVAGNSAEAERRGLRKRPLWIKISPDSTPEELDELATVAMESGLDGIIATNTTVRREG--DYAGIPDVGGLSGAPLRERSLAVVSQLRRTVGPGVPIVGVGGVLSVADALTMRAVGADLVQIYTGFIYGGPLMPSKLAAALRK 849
            NR+GLAAG DKNG  I++   +GFG +E+G +TPRPQ G+PRPR+FR+P + A+ NR+GFNNQGV+A+  R    R R V+GIN+GK  DTP+E A+DDYL  L   YP ADY +INISSPNTA LR L        L R+L       ++R G ++RPL IKI+PD    +L ++A  A E G+DG+IATNTT+ R G    A   + GGLSGAPLR  +  V+ +LR+ VGP  P++GVGG+LS ADA   R  GADLVQIYTGFIY GP      A ALR+
Sbjct:   55 NRVGLAAGLDKNGECIEAFDRMGFGFIEIGTVTPRPQAGNPRPRMFRLPHERAIINRLGFNNQGVDALVARATRARRRAVLGINIGKNADTPIERAEDDYLICLGKVYPVADYITINISSPNTAGLRDLQQSGRFDQLLRKLTDAREQLSDRHG-KRRPLLIKIAPDIDDAQLIDIAQTARERGIDGLIATNTTITRTGVEHRALAKEAGGLSGAPLRPLADRVLRRLRQAVGPDFPLIGVGGILSGADAAARREAGADLVQIYTGFIYRGPGFIGDCARALRR 337          
BLAST of mRNA_P-wetherbeei_contig10689.1.1 vs. uniprot
Match: UPI0003B6F123 (quinone-dependent dihydroorotate dehydrogenase n=1 Tax=Nevskia ramosa TaxID=64002 RepID=UPI0003B6F123)

HSP 1 Score: 286 bits (732), Expect = 1.590e-92
Identity = 153/284 (53.87%), Postives = 192/284 (67.61%), Query Frame = 1
Query:    4 NRIGLAAGFDKNGYFIDSAQALGFGHLEVGAITPRPQPGHPRPRLFRVPGKAALRNRMGFNNQGVEAIYPRLPATRGRIVVGINLGKGLDTPLENAQDDYLAVLRATYPRADYYSINISSPNTANLRQLGSGEALRALCRELVAGNSAEAERRGLRKRPLWIKISPDSTPEELDELATVAMESGLDGIIATNTTVRREGDYAGIP---DVGGLSGAPLRERSLAVVSQLRRTVGPGVPIVGVGGVLSVADALTMRAVGADLVQIYTGFIYGGPLMPSKLAAALR 846
            NRIGLAAG DKNG  I++   +GFG +EVG +TPRPQPG+PRPR+FR+P + AL NR+GFNNQGV+A+  R    R R V+GIN+GK  DTP+E A+ DYLA L   Y  ADY ++NISSPNT  LR+L       +L   L         R G+R RP+ +KI+PD   E L  +A  A   G+DG+IATNTT+ RE   AG+P   + GGLSGAPL + S A+++QLR  VGP  P++GVGGV+S ADA   RA GADLVQIYTG IY GP +  + A ALR
Sbjct:   55 NRIGLAAGLDKNGEAIEAFDRMGFGFIEVGTVTPRPQPGNPRPRMFRLPSERALINRLGFNNQGVDALVKRTARIRRRAVLGINIGKNADTPMEQAELDYLACLHKVYAVADYITVNISSPNTKGLRELQQASRFDSLLSALGDAREQLTARYGVR-RPILVKIAPDIDEEALIGIADAARRHGIDGLIATNTTIAREA-VAGLPHAHETGGLSGAPLLKASNAILAQLRERVGPDFPLIGVGGVMSGADAAAKRAAGADLVQIYTGLIYRGPALVPECARALR 336          
BLAST of mRNA_P-wetherbeei_contig10689.1.1 vs. uniprot
Match: UPI0018EB59B1 (quinone-dependent dihydroorotate dehydrogenase n=1 Tax=Xylophilus sp. ASV27 TaxID=2795129 RepID=UPI0018EB59B1)

HSP 1 Score: 284 bits (727), Expect = 1.170e-91
Identity = 154/291 (52.92%), Postives = 196/291 (67.35%), Query Frame = 1
Query:    1 PNRIGLAAGFDKNGYFIDSAQALGFGHLEVGAITPRPQPGHPRPRLFRVPGKAALRNRMGFNNQGVEAI-----YPRLPATRGR-IVVGINLGKGLDTPLENAQDDYLAVLRATYPRADYYSINISSPNTANLRQLGSGEALRALCRELVAGNSAEAERRGLRKRPLWIKISPDSTPEELDELATVAMESGLDGIIATNTTVRREGDYAGIP---DVGGLSGAPLRERSLAVVSQLRRTVGPGVPIVGVGGVLSVADALTMRAVGADLVQIYTGFIYGGPLMPSKLAAALR 846
            PNR+GLAAG DKN   ID+  A+GFG +EVG +TPR QPG+P+PR+FR+P   AL NR+GFNN G++A      + RL    GR +++G+N+GK  DTP+E A DDYLA L   YP ADY ++NISSPNT NLR L S EAL  L   L       AER G R  PL++KI+PD    ++D +A       +DG+IATNTT+ RE   AG+P   + GGLSGAP+RE S  V++QLR  +G G PI+GVGG+LS ADAL     GAD+VQ+YTG IY GP + S+ A ALR
Sbjct:   57 PNRVGLAAGLDKNARCIDALGAMGFGFVEVGTVTPRGQPGNPQPRMFRLPQAEALINRLGFNNLGLDAFLANVQHSRLRQRAGRSMLLGLNIGKNADTPIERAADDYLACLEGVYPHADYVTVNISSPNTRNLRSLQSDEALDGLLGVLTERRGLLAERHG-RGVPLFLKIAPDLDESQVDAIAATLRRHAMDGVIATNTTIAREA-VAGLPHAMEAGGLSGAPVREASNRVIAQLRTRLGQGFPIIGVGGILSAADALAKIRAGADVVQVYTGLIYRGPALVSEAANALR 345          
BLAST of mRNA_P-wetherbeei_contig10689.1.1 vs. uniprot
Match: A0A1J5QRV8_9ZZZZ (Dihydroorotate dehydrogenase (quinone) n=1 Tax=mine drainage metagenome TaxID=410659 RepID=A0A1J5QRV8_9ZZZZ)

HSP 1 Score: 284 bits (726), Expect = 1.290e-91
Identity = 150/285 (52.63%), Postives = 197/285 (69.12%), Query Frame = 1
Query:    1 PNRIGLAAGFDKNGYFIDSAQALGFGHLEVGAITPRPQPGHPRPRLFRVPGKAALRNRMGFNNQGVEAIYPRLPATRGRIVVGINLGKGLDTPLENAQDDYLAVLRATYPRADYYSINISSPNTANLRQLGSGEALRALCRELVAGNSAEAERRGLRKRPLWIKISPDSTPEELDELATVAMESGLDGIIATNTTVRREG----DYAGIPDVGGLSGAPLRERSLAVVSQLRRTVGPGVPIVGVGGVLSVADALTMRAVGADLVQIYTGFIYGGPLMPSKLAAAL 843
            PNR+GLAAG DKNG  ID+  ALGFG +EVG +TPRPQPG+P+PRLFR+P   AL NRMGFNN G++A    +  +R  + +G+N+GK   TP+E A DDYLA LRA +  ADY ++N+SSPNT NLRQL S +AL  L   L    +  A+ +G R+ PL +KI+PD  P ++D LA   +   +DG+IATNTT+ R+G     +AG  + GGLSGAPLR R+ AV++QLR  +GPG PI+GVGG++  A A      GADLVQ+YTG IY GP + ++ A AL
Sbjct:   57 PNRVGLAAGLDKNGEAIDALAALGFGFIEVGTVTPRPQPGNPQPRLFRLPQAQALINRMGFNNDGLDAFLRHVRRSRREVPLGLNIGKNAATPIERALDDYLAGLRAVHEHADYVTVNVSSPNTRNLRQLQSDDALENLLGGLADERARLADAQG-RRVPLLLKIAPDLEPAQIDALADALLRHRVDGVIATNTTLSRDGVEGLRHAG--ETGGLSGAPLRARADAVIAQLRARLGPGYPIIGVGGIVDAAAARAKLDAGADLVQLYTGLIYRGPQLIAECAQAL 338          
BLAST of mRNA_P-wetherbeei_contig10689.1.1 vs. uniprot
Match: A0A238DM03_9BURK (Dihydroorotate dehydrogenase (quinone) n=2 Tax=root TaxID=1 RepID=A0A238DM03_9BURK)

HSP 1 Score: 284 bits (726), Expect = 1.460e-91
Identity = 149/284 (52.46%), Postives = 192/284 (67.61%), Query Frame = 1
Query:    1 PNRIGLAAGFDKNGYFIDSAQALGFGHLEVGAITPRPQPGHPRPRLFRVPGKAALRNRMGFNNQGVEAIYPRLPATRGRIVVGINLGKGLDTPLENAQDDYLAVLRATYPRADYYSINISSPNTANLRQLGSGEALRALCRELVAGNSAEAERRGLRKRPLWIKISPDSTPEELDELATVAMESGLDGIIATNTTVRREGDYAGIP---DVGGLSGAPLRERSLAVVSQLRRTVGPGVPIVGVGGVLSVADALTMRAVGADLVQIYTGFIYGGPLMPSKLAAAL 843
            PNRIGLAAG DKNG  ID+  A+GFG +EVG +TPR QPG+ +PRLFR+P   AL NRMGFNN G++A    +  +R  + +G+N+GK   TP+E A DDY A LRA Y  ADY +IN+SSPNT  LR L +  AL AL   L       A+ +G R  PL +K++PD  PE++  LA   M  G+DG+IATNTT+ R+   AG+P   + GGLSGAPLRE+S  V++QLR  +GPG PI+GVGG+L   DA+     GA+LVQ+YTG IY GP + S+ A AL
Sbjct:   57 PNRIGLAAGLDKNGAAIDALAAMGFGFIEVGTVTPRAQPGNAKPRLFRLPQAQALINRMGFNNAGLDAFLHHVRRSRRELPLGLNIGKNASTPMEQALDDYAAGLRAVYAHADYVTINVSSPNTQGLRALQTDAALEALLTGLATEREQLAQAQGKRV-PLMVKVAPDLQPEQIAALADALMRHGIDGVIATNTTIARDA-VAGLPHADEAGGLSGAPLREQSTRVIAQLRARLGPGYPIIGVGGILQAGDAVKKIQAGANLVQLYTGLIYQGPELVSRCAQAL 338          
BLAST of mRNA_P-wetherbeei_contig10689.1.1 vs. uniprot
Match: A0A318EAM1_9GAMM (Dihydroorotate dehydrogenase (quinone) n=2 Tax=Sinimarinibacterium flocculans TaxID=985250 RepID=A0A318EAM1_9GAMM)

HSP 1 Score: 283 bits (724), Expect = 2.580e-91
Identity = 152/284 (53.52%), Postives = 193/284 (67.96%), Query Frame = 1
Query:    1 PNRIGLAAGFDKNGYFIDSAQALGFGHLEVGAITPRPQPGHPRPRLFRVPGKAALRNRMGFNNQGVEAIYPRLPATRGRIVVGINLGKGLDTPLENAQDDYLAVLRATYPRADYYSINISSPNTANLRQLGSGEALRALCRELVAGNSAEAERRGLRKRPLWIKISPDSTPEELDELATVAMESGLDGIIATNTTVRREGDYAGIP---DVGGLSGAPLRERSLAVVSQLRRTVGPGVPIVGVGGVLSVADALTMRAVGADLVQIYTGFIYGGPLMPSKLAAAL 843
            PNR+GLAAG DKNG  + + QALGFG +E+G +TPRPQPG+PRPR+FR+P   AL NR+GFNN+GV+ +   +  +    V+GIN+GK  DTP+E A +DYL+ LR  Y  A Y ++NISSPNT NLR+L   E LR L   L A  +  A+  G R  P+ +KI+PD +  ELD +AT A E G+DG+IATNTT+ R G   G+P   + GGLSGAPLR  +   + QLRR VG   P+VGVGG+L  ADA   R  GADLVQIYTGFIY GP + +  A AL
Sbjct:   57 PNRVGLAAGLDKNGECLRAWQALGFGFVEIGTVTPRPQPGNPRPRMFRLPEHEALINRLGFNNKGVDHLLRCVAESDYDGVLGINIGKNFDTPIERADEDYLSCLRKVYAAASYVTVNISSPNTRNLRELQQAERLRGLLSALGAERARLAQEHG-RHCPILVKIAPDVSAAELDGIATAARECGIDGLIATNTTIERPG-LDGVPLASETGGLSGAPLRPLADETLQQLRRRVGADFPLVGVGGILGAADARRKREAGADLVQIYTGFIYRGPGLIADCARAL 338          
BLAST of mRNA_P-wetherbeei_contig10689.1.1 vs. uniprot
Match: A0A554WDD0_9BURK (Dihydroorotate dehydrogenase (quinone) n=3 Tax=Tepidimonas TaxID=114248 RepID=A0A554WDD0_9BURK)

HSP 1 Score: 283 bits (724), Expect = 3.540e-91
Identity = 153/291 (52.58%), Postives = 194/291 (66.67%), Query Frame = 1
Query:    1 PNRIGLAAGFDKNGYFIDSAQALGFGHLEVGAITPRPQPGHPRPRLFRVPGKAALRNRMGFNNQGVEAIYPRLPATRGR------IVVGINLGKGLDTPLENAQDDYLAVLRATYPRADYYSINISSPNTANLRQLGSGEALRALCRELVAGNSAEAERRGLRKRPLWIKISPDSTPEELDELATVAMESGLDGIIATNTTVRREGDYAGIP---DVGGLSGAPLRERSLAVVSQLRRTVGPGVPIVGVGGVLSVADALTMRAVGADLVQIYTGFIYGGPLMPSKLAAALR 846
            PNR+GLAAG DKN   ID+  ALGFG +EVG +TPRPQPG+PRPRLFR+P   AL NR GFNN+G+EA    + A+R R      +V+G+N+GK   TP+E A DDYL  LR  Y  ADY ++NISSPNTANLRQL S  AL  L   L+   +   +  G RK PL++KI+PD    ++  +A      G+DG+IATNTT+ RE    G+P   + GGLSGAPL E S  V++ LR  +GPG PI+GVGG+LS ADA+     GAD VQ+YTG IY GP +  ++A ALR
Sbjct:   58 PNRVGLAAGLDKNARCIDAWAALGFGFVEVGTVTPRPQPGNPRPRLFRLPQAQALINRFGFNNEGLEAFVGHVRASRVRRDGAAALVLGLNIGKNAATPIERAVDDYLLGLRGVYAHADYVTVNISSPNTANLRQLQSDAALEGLLAALMQERARLEDAHGARK-PLFVKIAPDLDEAQIGAIAEALQRHGMDGVIATNTTLAREA-VRGLPHAEEAGGLSGAPLAEASNRVIAALRARLGPGYPIIGVGGILSGADAVAKLRAGADAVQLYTGLIYRGPALVGEVAQALR 346          
BLAST of mRNA_P-wetherbeei_contig10689.1.1 vs. uniprot
Match: A0A519EWN6_9BURK (Dihydroorotate dehydrogenase (quinone) n=2 Tax=Variovorax TaxID=34072 RepID=A0A519EWN6_9BURK)

HSP 1 Score: 282 bits (722), Expect = 8.310e-91
Identity = 153/293 (52.22%), Postives = 198/293 (67.58%), Query Frame = 1
Query:    1 PNRIGLAAGFDKNGYFIDSAQALGFGHLEVGAITPRPQPGHPRPRLFRVPGKAALRNRMGFNNQGVEAIYPRLPATRGR--------IVVGINLGKGLDTPLENAQDDYLAVLRATYPRADYYSINISSPNTANLRQLGSGEALRALCRELVAGNSAEAERRGLRKRPLWIKISPDSTPEELDELATVAMESGLDGIIATNTTVRREGDYAGIP---DVGGLSGAPLRERSLAVVSQLRRTVGPGVPIVGVGGVLSVADALTMRAVGADLVQIYTGFIYGGPLMPSKLAAALR 846
            PNRIGLAAG DKN   ID+  A+GFG +EVG +TP+PQPG+ +PR+FR+P + AL NR+GFNN G++A    +   R R        +++G+N+GK   TP+E A DDYL  L   YP ADY +INISSPNTANLR L S  AL  L   LV    A AE+  +++ PL++KI+PD    ++  +A      G+DG+IATNTT+ RE   AG+P   + GGLSGAP+R+ S  V++QLRRT+G G PIVGVGGVLS ADA    A GAD+VQIYTG +Y GP + S+ A ALR
Sbjct:   62 PNRIGLAAGLDKNARCIDAFAAMGFGFVEVGTVTPKPQPGNAKPRMFRLPERDALINRLGFNNDGLDAFVANVRRARFRSASVPTTPMLLGLNIGKNAATPIERATDDYLIALDGVYPHADYVTINISSPNTANLRSLQSDAALDGLLGALVERREALAEQH-MKRVPLFLKIAPDLDEPQVQSIAATLTRHGMDGVIATNTTLSREA-VAGLPHAEEAGGLSGAPVRKASDRVIAQLRRTLGAGFPIVGVGGVLSGADASAKLAAGADIVQIYTGLVYRGPALVSEAARALR 352          
BLAST of mRNA_P-wetherbeei_contig10689.1.1 vs. uniprot
Match: UPI00131BD264 (quinone-dependent dihydroorotate dehydrogenase n=1 Tax=Xenophilus sp. L33 TaxID=1747220 RepID=UPI00131BD264)

HSP 1 Score: 282 bits (722), Expect = 8.850e-91
Identity = 150/292 (51.37%), Postives = 198/292 (67.81%), Query Frame = 1
Query:    1 PNRIGLAAGFDKNGYFIDSAQALGFGHLEVGAITPRPQPGHPRPRLFRVPGKAALRNRMGFNNQGVEAIYPRLPATRGR-------IVVGINLGKGLDTPLENAQDDYLAVLRATYPRADYYSINISSPNTANLRQLGSGEALRALCRELVAGNSAEAERRGLRKRPLWIKISPDSTPEELDELATVAMESGLDGIIATNTTVRREGDYAGIP---DVGGLSGAPLRERSLAVVSQLRRTVGPGVPIVGVGGVLSVADALTMRAVGADLVQIYTGFIYGGPLMPSKLAAALR 846
            PNR+GLAAG DKN   ID+  A+GFG +EVG +TP+ QPG+P+PR+FR+P + AL NR+GFNN+G++A    +   R R       +++G+N+GK   TP+E A DDYL  L   YP ADY +INISSPNTANLR L S +AL  L   L       A R G R  PL++KI+PD  P +++ +A      G+DG+IATNTT+ R+   AG+P   + GGLSGAP+RE S  VV QLR+ +G G PI+GVGG+LS +DA    A GADLVQIYTG IY GP + +++A+ALR
Sbjct:   62 PNRVGLAAGLDKNARCIDAFAAMGFGFVEVGTVTPKAQPGNPKPRMFRLPKRDALINRLGFNNEGLDAFVANVQKARFRRDTSRPPMLLGLNIGKNAATPIERAVDDYLVCLAGVYPHADYVTINISSPNTANLRSLQSDQALDTLLGALADKRETLAARLGKRV-PLFVKIAPDLEPAQVEVIAATLKRHGMDGVIATNTTLARDA-VAGLPHAEEAGGLSGAPVREASDRVVGQLRQALGAGYPIIGVGGILSASDARAKIAAGADLVQIYTGLIYRGPALVTRVASALR 351          
BLAST of mRNA_P-wetherbeei_contig10689.1.1 vs. uniprot
Match: A0A0H2M1J2_VARPD (Dihydroorotate dehydrogenase (quinone) n=14 Tax=Variovorax TaxID=34072 RepID=A0A0H2M1J2_VARPD)

HSP 1 Score: 282 bits (722), Expect = 9.130e-91
Identity = 153/298 (51.34%), Postives = 198/298 (66.44%), Query Frame = 1
Query:    1 PNRIGLAAGFDKNGYFIDSAQALGFGHLEVGAITPRPQPGHPRPRLFRVPGKAALRNRMGFNNQGVEAIYPRLPATRGR----------IVVGINLGKGLDTPLENAQDDYLAVLRATYPRADYYSINISSPNTANLRQLGSGEALRALCRELVAGNSAEAERRGLRKRPLWIKISPDSTPEELDELATVAMESGLDGIIATNTTVRREGDYAGIP---DVGGLSGAPLRERSLAVVSQLRRTVGPGVPIVGVGGVLSVADALTMRAVGADLVQIYTGFIYGGPLMPSKLAAALRKDK 855
            PNR+GLAAG DKN   ID+  A+GFG +EVG +TPR QPG+P+PR+FR+P + AL NR+GFNN+G++A    +   R R          +++G+N+GK   TP+E A DDYLA L   YP ADY +INISSPNTANLR L S EAL AL   +     A AER   R+ PL++KI+PD    ++  +A      G+DG+IATNTT+ R+   AG+P   + GGLSGAP+RE S  V+SQLR  +GPG PI+GVGG+LS ADA    A GAD+VQIYTG IY GP    + A AL + +
Sbjct:   61 PNRVGLAAGLDKNARCIDAFAAMGFGFVEVGTVTPRAQPGNPKPRMFRLPQRDALINRLGFNNEGLDAFLANVQKARFRRNESGGSKKPMLLGLNIGKNAATPIERAVDDYLACLDGVYPHADYVTINISSPNTANLRTLQSDEALDALLGAIAERRHALAER-SRRRVPLFVKIAPDLDESQVAVIAATLQRHGMDGVIATNTTLARDA-VAGLPHADEAGGLSGAPVREASNRVISQLRAALGPGFPIIGVGGILSAADAKAKIAAGADVVQIYTGLIYRGPGFVREAAQALLQSR 356          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10689.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0004A7656E9.900e-9353.17quinone-dependent dihydroorotate dehydrogenase n=1... [more]
UPI0003B6F1231.590e-9253.87quinone-dependent dihydroorotate dehydrogenase n=1... [more]
UPI0018EB59B11.170e-9152.92quinone-dependent dihydroorotate dehydrogenase n=1... [more]
A0A1J5QRV8_9ZZZZ1.290e-9152.63Dihydroorotate dehydrogenase (quinone) n=1 Tax=min... [more]
A0A238DM03_9BURK1.460e-9152.46Dihydroorotate dehydrogenase (quinone) n=2 Tax=roo... [more]
A0A318EAM1_9GAMM2.580e-9153.52Dihydroorotate dehydrogenase (quinone) n=2 Tax=Sin... [more]
A0A554WDD0_9BURK3.540e-9152.58Dihydroorotate dehydrogenase (quinone) n=3 Tax=Tep... [more]
A0A519EWN6_9BURK8.310e-9152.22Dihydroorotate dehydrogenase (quinone) n=2 Tax=Var... [more]
UPI00131BD2648.850e-9151.37quinone-dependent dihydroorotate dehydrogenase n=1... [more]
A0A0H2M1J2_VARPD9.130e-9151.34Dihydroorotate dehydrogenase (quinone) n=14 Tax=Va... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10689contigP-wetherbeei_contig10689:3..863 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1122604.JONR01000004_gene849
Preferred namepyrD
PFAMsDHO_dh
Model size861
Max annot lvl135614|Xanthomonadales
KEGG rclassRC00051
KEGG koko:K00254
KEGG ReactionR01868
KEGG Pathwayko00240,ko01100,map00240,map01100
KEGG ModuleM00051
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.62e-93
EggNOG OGsCOG0167@1|root,COG0167@2|Bacteria,1MU7C@1224|Proteobacteria,1RMCP@1236|Gammaproteobacteria,1X33F@135614|Xanthomonadales
EC1.3.5.2
DescriptionCatalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor
Cds size861
COG categoryF
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185880.772322-CDS-P-wetherbeei_contig10689:2..8631683185880.772322-CDS-P-wetherbeei_contig10689:2..863Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10689 3..863 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10689.1.1prot_P-wetherbeei_contig10689.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig10689 3..863 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig10689.1.1

>prot_P-wetherbeei_contig10689.1.1 ID=prot_P-wetherbeei_contig10689.1.1|Name=mRNA_P-wetherbeei_contig10689.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=287bp
PNRIGLAAGFDKNGYFIDSAQALGFGHLEVGAITPRPQPGHPRPRLFRVP
GKAALRNRMGFNNQGVEAIYPRLPATRGRIVVGINLGKGLDTPLENAQDD
YLAVLRATYPRADYYSINISSPNTANLRQLGSGEALRALCRELVAGNSAE
AERRGLRKRPLWIKISPDSTPEELDELATVAMESGLDGIIATNTTVRREG
DYAGIPDVGGLSGAPLRERSLAVVSQLRRTVGPGVPIVGVGGVLSVADAL
TMRAVGADLVQIYTGFIYGGPLMPSKLAAALRKDKI*
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mRNA from alignment at P-wetherbeei_contig10689:3..863+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig10689.1.1 ID=mRNA_P-wetherbeei_contig10689.1.1|Name=mRNA_P-wetherbeei_contig10689.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=861bp|location=Sequence derived from alignment at P-wetherbeei_contig10689:3..863+ (Phaeothamnion wetherbeei SAG_119_79)
CCCAATCGTATCGGGCTGGCGGCCGGATTCGACAAAAACGGGTATTTCAT CGATAGCGCTCAGGCTCTGGGCTTTGGGCATCTCGAAGTGGGAGCCATCA CGCCGCGCCCTCAGCCGGGACACCCCCGGCCCCGGCTCTTTCGGGTGCCT GGCAAAGCGGCGCTGCGTAATCGGATGGGCTTCAACAATCAGGGCGTCGA GGCGATTTACCCGCGCCTGCCCGCGACGCGCGGACGCATCGTGGTAGGCA TCAATCTGGGCAAAGGCCTGGACACTCCGCTGGAAAACGCCCAGGACGAT TATCTGGCCGTTCTGCGCGCCACCTACCCTCGGGCCGATTATTATTCCAT CAACATCAGCTCTCCCAATACCGCCAACTTGCGTCAGCTGGGCAGCGGTG AGGCCCTGCGAGCCCTGTGCCGGGAGCTGGTCGCGGGCAATTCGGCGGAG GCCGAGAGGCGCGGGCTGCGCAAGCGGCCCCTGTGGATCAAGATCAGCCC GGATTCGACGCCCGAAGAGCTGGACGAGCTGGCCACGGTGGCTATGGAGA GCGGGCTGGACGGGATCATCGCGACCAACACGACGGTCCGCCGAGAGGGA GATTACGCGGGGATTCCCGATGTCGGCGGCCTGAGCGGGGCACCGTTGCG AGAGCGTAGCCTGGCGGTGGTTTCCCAACTACGCCGGACCGTCGGGCCTG GCGTCCCGATTGTCGGCGTGGGTGGGGTCCTCTCGGTGGCCGATGCGCTG ACCATGCGCGCGGTGGGGGCCGATCTGGTGCAAATTTACACGGGATTTAT CTACGGCGGACCGCTGATGCCCTCCAAACTGGCGGCCGCCCTGCGGAAGG ACAAGATATGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig10689:3..863+

>mRNA_P-wetherbeei_contig10689.1.1 ID=mRNA_P-wetherbeei_contig10689.1.1|Name=mRNA_P-wetherbeei_contig10689.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=861bp|location=Sequence derived from alignment at P-wetherbeei_contig10689:3..863+ (Phaeothamnion wetherbeei SAG_119_79)
CCCAATCGTATCGGGCTGGCGGCCGGATTCGACAAAAACGGGTATTTCAT
CGATAGCGCTCAGGCTCTGGGCTTTGGGCATCTCGAAGTGGGAGCCATCA
CGCCGCGCCCTCAGCCGGGACACCCCCGGCCCCGGCTCTTTCGGGTGCCT
GGCAAAGCGGCGCTGCGTAATCGGATGGGCTTCAACAATCAGGGCGTCGA
GGCGATTTACCCGCGCCTGCCCGCGACGCGCGGACGCATCGTGGTAGGCA
TCAATCTGGGCAAAGGCCTGGACACTCCGCTGGAAAACGCCCAGGACGAT
TATCTGGCCGTTCTGCGCGCCACCTACCCTCGGGCCGATTATTATTCCAT
CAACATCAGCTCTCCCAATACCGCCAACTTGCGTCAGCTGGGCAGCGGTG
AGGCCCTGCGAGCCCTGTGCCGGGAGCTGGTCGCGGGCAATTCGGCGGAG
GCCGAGAGGCGCGGGCTGCGCAAGCGGCCCCTGTGGATCAAGATCAGCCC
GGATTCGACGCCCGAAGAGCTGGACGAGCTGGCCACGGTGGCTATGGAGA
GCGGGCTGGACGGGATCATCGCGACCAACACGACGGTCCGCCGAGAGGGA
GATTACGCGGGGATTCCCGATGTCGGCGGCCTGAGCGGGGCACCGTTGCG
AGAGCGTAGCCTGGCGGTGGTTTCCCAACTACGCCGGACCGTCGGGCCTG
GCGTCCCGATTGTCGGCGTGGGTGGGGTCCTCTCGGTGGCCGATGCGCTG
ACCATGCGCGCGGTGGGGGCCGATCTGGTGCAAATTTACACGGGATTTAT
CTACGGCGGACCGCTGATGCCCTCCAAACTGGCGGCCGCCCTGCGGAAGG
ACAAGATATGA
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