mRNA_P-wetherbeei_contig10612.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig10612.1.1
Unique NamemRNA_P-wetherbeei_contig10612.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig10612.1.1 vs. uniprot
Match: A0A6I3ENR1_9ACTN (PIG-L family deacetylase n=2 Tax=root TaxID=1 RepID=A0A6I3ENR1_9ACTN)

HSP 1 Score: 320 bits (821), Expect = 1.620e-108
Identity = 160/211 (75.83%), Postives = 174/211 (82.46%), Query Frame = 1
Query:    1 AAAGCVVHHLVCTDGSKGTWNPDADVVALAATRQVEQREAARRLAGANAGTVHFLGAVDGELDSGLAMRGEVARVIREVRPQVVLGHDPWKRYRIHPDHRHAGLLACEGVVAARDPHFFREQGLAPHRPDALLLWEADEPHHVEDVSGFVDVKLHALEAHASQFESTMKAVDGAQLDAFRERIANRLRSTGEVYGVDAA---EVFATIIDL 624
            AAAGC VHHLV TDGSKGTWNPDAD+ AL ATR+ EQREAARRL+GANAGTV FL  VDGELDS L +RGEVARVIR +RP VVLGHDPWKRYR+HPDHRHAGLLAC+G+VAARDPHFFR+ GL  HRPD LLLWEADEP HVEDVS FV  KL+ALEAH SQFESTMKAVD AQ++AFRERIA RL    + YG   A   E+F  I DL
Sbjct:   48 AAAGCTVHHLVLTDGSKGTWNPDADIAALIATRRSEQREAARRLSGANAGTVVFLEQVDGELDSSLWLRGEVARVIRTLRPAVVLGHDPWKRYRLHPDHRHAGLLACDGIVAARDPHFFRDHGLPSHRPDHLLLWEADEPDHVEDVSHFVTTKLNALEAHESQFESTMKAVDAAQVEAFRERIATRLSDLAQQYGAGGATSVEIFKRISDL 258          
BLAST of mRNA_P-wetherbeei_contig10612.1.1 vs. uniprot
Match: A0A539DXU6_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A539DXU6_9ACTN)

HSP 1 Score: 318 bits (814), Expect = 1.820e-107
Identity = 156/208 (75.00%), Postives = 174/208 (83.65%), Query Frame = 1
Query:    1 AAAGCVVHHLVCTDGSKGTWNPDADVVALAATRQVEQREAARRLAGANAGTVHFLGAVDGELDSGLAMRGEVARVIREVRPQVVLGHDPWKRYRIHPDHRHAGLLACEGVVAARDPHFFREQGLAPHRPDALLLWEADEPHHVEDVSGFVDVKLHALEAHASQFESTMKAVDGAQLDAFRERIANRLRSTGEVYGVDAAEVFATIIDL 624
            A+AGCVVHHL+CTDGSKGTW+  AD  ALAA RQVEQREAA RLAGA+AG V FLG VDGELDS LA+RG+VARVIRE+RP VVLGHDPWKRYR+HPDHRHAGLLACE VVAARDPHFFRE  +A HRP+A+LLWEADEP+HVEDV+ FVDVKL ALEAH SQFESTM AVD A ++ FR R+  RL   G  +GV AAE+F  I DL
Sbjct:   50 ASAGCVVHHLICTDGSKGTWDTHADTDALAARRQVEQREAAHRLAGASAGEVRFLGLVDGELDSALAVRGQVARVIRELRPHVVLGHDPWKRYRLHPDHRHAGLLACEAVVAARDPHFFREHTIAHHRPEAILLWEADEPNHVEDVTEFVDVKLAALEAHESQFESTMNAVDDASIEQFRGRVRERLHRLGAQFGVGAAELFRLIDDL 257          
BLAST of mRNA_P-wetherbeei_contig10612.1.1 vs. uniprot
Match: UPI000346E0E7 (PIG-L family deacetylase n=1 Tax=Ilumatobacter nonamiensis TaxID=467093 RepID=UPI000346E0E7)

HSP 1 Score: 311 bits (797), Expect = 7.270e-105
Identity = 156/208 (75.00%), Postives = 167/208 (80.29%), Query Frame = 1
Query:    1 AAAGCVVHHLVCTDGSKGTWNPDADVVALAATRQVEQREAARRLAGANAGTVHFLGAVDGELDSGLAMRGEVARVIREVRPQVVLGHDPWKRYRIHPDHRHAGLLACEGVVAARDPHFFREQGLAPHRPDALLLWEADEPHHVEDVSGFVDVKLHALEAHASQFESTMKAVDGAQLDAFRERIANRLRSTGEVYGVDAAEVFATIIDL 624
            AA GC VHHLVCTDGSKGTW+ D DV  LAA RQ EQREAARRLAGANAG V FLG VDGELDSGL  RG VA  IRE+RP VVLGHDPWKRYR+HPDHRHAGLL CEG+VAARDPHFFRE  +  HRPDALLLWEADEP HVEDV+ FV  KL ALEAH SQFESTMKAVD A+LD FR R+A+RL   G  + + AAEVF  I DL
Sbjct:   51 AADGCTVHHLVCTDGSKGTWDADVDVDELAARRQDEQREAARRLAGANAGEVRFLGYVDGELDSGLDARGRVALTIRELRPSVVLGHDPWKRYRLHPDHRHAGLLVCEGIVAARDPHFFREHPVEHHRPDALLLWEADEPDHVEDVTDFVATKLEALEAHQSQFESTMKAVDDAELDEFRARVADRLGLLGAPHSMRAAEVFTLIDDL 258          
BLAST of mRNA_P-wetherbeei_contig10612.1.1 vs. uniprot
Match: A0A2E3TUB2_9ACTN (PIG-L domain-containing protein n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A2E3TUB2_9ACTN)

HSP 1 Score: 310 bits (794), Expect = 2.550e-104
Identity = 154/211 (72.99%), Postives = 174/211 (82.46%), Query Frame = 1
Query:    1 AAAGCVVHHLVCTDGSKGTWNPDADVVALAATRQVEQREAARRLAGAN---AGTVHFLGAVDGELDSGLAMRGEVARVIREVRPQVVLGHDPWKRYRIHPDHRHAGLLACEGVVAARDPHFFREQGLAPHRPDALLLWEADEPHHVEDVSGFVDVKLHALEAHASQFESTMKAVDGAQLDAFRERIANRLRSTGEVYGVDAAEVFATIIDL 624
            AA GC +HHLVCTDGSKGTW+ DADV ALAA RQ+EQREAA RLAG++   +G V FLG VDGELDS LA+R EVA VIRE+RPQ+VLGHDPWKRYR+HPDHRHAGLL CEG+VA+RDPHFF E GL+ HRPDAL+LWEADEP HVEDVSGFV+ KLHAL AH SQFESTMKAVD + LDAFR RI +RL S G  + + AAEV+  I  L
Sbjct:   54 AADGCTIHHLVCTDGSKGTWDVDADVDALAARRQLEQREAALRLAGSSPSCSGEVRFLGHVDGELDSTLAVRAEVALVIREIRPQIVLGHDPWKRYRLHPDHRHAGLLTCEGIVASRDPHFFPEHGLSHHRPDALMLWEADEPDHVEDVSGFVETKLHALLAHESQFESTMKAVDDSTLDAFRSRINHRLSSLGAPHDLGAAEVYKLITSL 264          
BLAST of mRNA_P-wetherbeei_contig10612.1.1 vs. uniprot
Match: A0A7Y1ZT66_9ACTN (PIG-L family deacetylase n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A7Y1ZT66_9ACTN)

HSP 1 Score: 309 bits (792), Expect = 4.190e-104
Identity = 153/210 (72.86%), Postives = 171/210 (81.43%), Query Frame = 1
Query:    1 AAAGCVVHHLVCTDGSKGTWNPDADVVALAATRQVEQREAARRLAGA--NAGTVHFLGAVDGELDSGLAMRGEVARVIREVRPQVVLGHDPWKRYRIHPDHRHAGLLACEGVVAARDPHFFREQGLAPHRPDALLLWEADEPHHVEDVSGFVDVKLHALEAHASQFESTMKAVDGAQLDAFRERIANRLRSTGEVYGVDAAEVFATIIDL 624
            AA GCV+HHL+CTDG+KGTW+  AD VALAA RQ EQREAARRLAG+   AG V FLG VDGELDS L  RGEVAR+IRE++PQVV+GHDPWKRYR+HPDHRHAGLL CEG+VAARDPHF+RE GLA HRPDAL L+EADEP HVEDV+ FVDVKL AL AH SQFESTMKA+D  QL AFR+RI +RL   G  +G   AEVF  I DL
Sbjct:   49 AADGCVIHHLICTDGAKGTWDAGADTVALAARRQDEQREAARRLAGSPDRAGDVRFLGDVDGELDSSLVRRGEVARIIRELQPQVVMGHDPWKRYRLHPDHRHAGLLTCEGIVAARDPHFYREHGLAAHRPDALFLFEADEPDHVEDVTAFVDVKLDALLAHTSQFESTMKALDADQLGAFRDRIRSRLAELGAPFGFGGAEVFKIITDL 258          
BLAST of mRNA_P-wetherbeei_contig10612.1.1 vs. uniprot
Match: A0A3C1L332_9ACTN (PIG-L family deacetylase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C1L332_9ACTN)

HSP 1 Score: 306 bits (785), Expect = 4.390e-103
Identity = 154/208 (74.04%), Postives = 167/208 (80.29%), Query Frame = 1
Query:    1 AAAGCVVHHLVCTDGSKGTWNPDADVVALAATRQVEQREAARRLAGANAGTVHFLGAVDGELDSGLAMRGEVARVIREVRPQVVLGHDPWKRYRIHPDHRHAGLLACEGVVAARDPHFFREQGLAPHRPDALLLWEADEPHHVEDVSGFVDVKLHALEAHASQFESTMKAVDGAQLDAFRERIANRLRSTGEVYGVDAAEVFATIIDL 624
            AAAGC+VHHLV TDGSKGTWN  ADV AL ATR+ EQR AAR LAG  AG V FLG VDGEL + LA+RGEVARVIR +RPQV+L HDPWK YR+HPDHR AGLLAC+G+VAARDPHF +E GLAPHRPDALLLWEA+ P HVEDV GFV+ KL ALEAH SQFESTMKAVDG QL AFR RI  RL   G  YGV +AEVF  I DL
Sbjct:   48 AAAGCLVHHLVLTDGSKGTWNASADVAALIATRRREQRAAARLLAGERAGEVVFLGEVDGELANSLALRGEVARVIRMLRPQVILAHDPWKHYRLHPDHREAGLLACDGIVAARDPHFNKEHGLAPHRPDALLLWEAEAPDHVEDVDGFVEHKLRALEAHESQFESTMKAVDGDQLAAFRSRIGERLAGLGARYGVASAEVFKRITDL 255          
BLAST of mRNA_P-wetherbeei_contig10612.1.1 vs. uniprot
Match: A0A6I3WN89_9ACTN (PIG-L family deacetylase n=2 Tax=root TaxID=1 RepID=A0A6I3WN89_9ACTN)

HSP 1 Score: 305 bits (781), Expect = 2.340e-102
Identity = 148/208 (71.15%), Postives = 166/208 (79.81%), Query Frame = 1
Query:    1 AAAGCVVHHLVCTDGSKGTWNPDADVVALAATRQVEQREAARRLAGANAGTVHFLGAVDGELDSGLAMRGEVARVIREVRPQVVLGHDPWKRYRIHPDHRHAGLLACEGVVAARDPHFFREQGLAPHRPDALLLWEADEPHHVEDVSGFVDVKLHALEAHASQFESTMKAVDGAQLDAFRERIANRLRSTGEVYGVDAAEVFATIIDL 624
            AA GC VHH+V TDGSKGTW+PDAD  ALAA RQVEQR+AA RLAG N G V FL  VDGELDS LA+RG+VAR IR ++P +VLGHDPWKRYR+HPDHRHAGLLAC+ VVAARDPHFFRE GLA HRP  LLLWEAD+P H EDV+GF+  KLHALEAH SQF+STMKA    QL AFR RI +RL   G  +GV AAE+F +I DL
Sbjct:   56 AADGCTVHHVVLTDGSKGTWDPDADTRALAAARQVEQRDAALRLAGTNRGQVMFLEQVDGELDSTLALRGQVARCIRLLQPDIVLGHDPWKRYRLHPDHRHAGLLACDAVVAARDPHFFREHGLAAHRPHTLLLWEADQPDHFEDVTGFIGTKLHALEAHTSQFQSTMKATSEDQLQAFRRRITDRLEGLGAAHGVGAAEIFKSITDL 263          
BLAST of mRNA_P-wetherbeei_contig10612.1.1 vs. uniprot
Match: A0A662DUS6_9ACTN (PIG-L family deacetylase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A662DUS6_9ACTN)

HSP 1 Score: 304 bits (779), Expect = 3.710e-102
Identity = 145/208 (69.71%), Postives = 172/208 (82.69%), Query Frame = 1
Query:    1 AAAGCVVHHLVCTDGSKGTWNPDADVVALAATRQVEQREAARRLAGANAGTVHFLGAVDGELDSGLAMRGEVARVIREVRPQVVLGHDPWKRYRIHPDHRHAGLLACEGVVAARDPHFFREQGLAPHRPDALLLWEADEPHHVEDVSGFVDVKLHALEAHASQFESTMKAVDGAQLDAFRERIANRLRSTGEVYGVDAAEVFATIIDL 624
            A+ GC +HHL+CTDGSKGTW+P+AD+ ALA  R+ EQR+AA RLAG +AG V FLG VDGEL+S L  RGEVA+ IRE+RP+VVLGHDPWKRYR+HPDHRHAGLLACEG+VA+RDPHFFR+QGL  HRP+ LLLWEA++P HVE+VS FVDVKLHAL AH SQFESTM AVD AQL AF  RI +RL   G  +G+++AE+F  I DL
Sbjct:   49 ASDGCTIHHLICTDGSKGTWDPNADLAALAIRRREEQRQAAARLAGPHAGEVRFLGYVDGELESDLKTRGEVAKTIRELRPEVVLGHDPWKRYRLHPDHRHAGLLACEGIVASRDPHFFRDQGLDHHRPERLLLWEAEQPDHVENVSAFVDVKLHALAAHESQFESTMNAVDDAQLAAFDVRIRDRLADLGRPHGMESAELFKLISDL 256          
BLAST of mRNA_P-wetherbeei_contig10612.1.1 vs. uniprot
Match: A0A6I3C743_9ACTN (PIG-L family deacetylase n=2 Tax=root TaxID=1 RepID=A0A6I3C743_9ACTN)

HSP 1 Score: 301 bits (772), Expect = 4.770e-101
Identity = 146/208 (70.19%), Postives = 166/208 (79.81%), Query Frame = 1
Query:    1 AAAGCVVHHLVCTDGSKGTWNPDADVVALAATRQVEQREAARRLAGANAGTVHFLGAVDGELDSGLAMRGEVARVIREVRPQVVLGHDPWKRYRIHPDHRHAGLLACEGVVAARDPHFFREQGLAPHRPDALLLWEADEPHHVEDVSGFVDVKLHALEAHASQFESTMKAVDGAQLDAFRERIANRLRSTGEVYGVDAAEVFATIIDL 624
            A+ GCVVHHLV TDGSKGTWNPDAD+ AL A R++EQREAA RLAG++ G V FL  +DGELDS LA+RGEVAR IR ++P V+ GHDPWKRYR+HPDHRHAGLLAC+ +VAARDPHFFRE GLA HRP +LLLWEAD P H EDV+ FV  KLHALEAHASQFESTMKA    QL+ FR RI++RL   G  + V AAEVF  I DL
Sbjct:   52 ASQGCVVHHLVLTDGSKGTWNPDADITALVAARKLEQREAALRLAGSHRGEVVFLEQIDGELDSTLALRGEVARCIRTLKPAVIAGHDPWKRYRLHPDHRHAGLLACDAIVAARDPHFFREHGLAAHRPHSLLLWEADAPDHFEDVTAFVGTKLHALEAHASQFESTMKATSTDQLEQFRTRISSRLEGLGAAHNVGAAEVFKLITDL 259          
BLAST of mRNA_P-wetherbeei_contig10612.1.1 vs. uniprot
Match: A0A6I3AGY0_9ACTN (PIG-L family deacetylase n=4 Tax=root TaxID=1 RepID=A0A6I3AGY0_9ACTN)

HSP 1 Score: 300 bits (769), Expect = 1.110e-100
Identity = 152/208 (73.08%), Postives = 164/208 (78.85%), Query Frame = 1
Query:    1 AAAGCVVHHLVCTDGSKGTWNPDADVVALAATRQVEQREAARRLAGANAGTVHFLGAVDGELDSGLAMRGEVARVIREVRPQVVLGHDPWKRYRIHPDHRHAGLLACEGVVAARDPHFFREQGLAPHRPDALLLWEADEPHHVEDVSGFVDVKLHALEAHASQFESTMKAVDGAQLDAFRERIANRLRSTGEVYGVDAAEVFATIIDL 624
            AAAGCVVHHLVCTDGSKGTWNPDAD+ AL  +RQ EQR AA  L G   G V FLG  DGEL+S LA RGEVAR IR +RP VVLGHDPWKRYR+HPDHRHAGLLACEG+VAARDPHFFR+  L+PHRP  LLLWEADEP H+EDVS  VDVKL ALEAH SQFESTMKA D +Q+D FR RI  RL   G   GVDAAE+F  I DL
Sbjct:   48 AAAGCVVHHLVCTDGSKGTWNPDADIDALILSRQDEQRAAASALGGT--GQVVFLGHTDGELESTLANRGEVARWIRTLRPDVVLGHDPWKRYRLHPDHRHAGLLACEGIVAARDPHFFRDHDLSPHRPHTLLLWEADEPDHLEDVSANVDVKLRALEAHRSQFESTMKAADESQMDGFRARIRLRLAEHGARLGVDAAEMFKRITDL 253          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10612.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6I3ENR1_9ACTN1.620e-10875.83PIG-L family deacetylase n=2 Tax=root TaxID=1 RepI... [more]
A0A539DXU6_9ACTN1.820e-10775.00Uncharacterized protein n=1 Tax=Acidimicrobiaceae ... [more]
UPI000346E0E77.270e-10575.00PIG-L family deacetylase n=1 Tax=Ilumatobacter non... [more]
A0A2E3TUB2_9ACTN2.550e-10472.99PIG-L domain-containing protein n=1 Tax=Ilumatobac... [more]
A0A7Y1ZT66_9ACTN4.190e-10472.86PIG-L family deacetylase n=1 Tax=Ilumatobacter sp.... [more]
A0A3C1L332_9ACTN4.390e-10374.04PIG-L family deacetylase n=1 Tax=Acidimicrobiaceae... [more]
A0A6I3WN89_9ACTN2.340e-10271.15PIG-L family deacetylase n=2 Tax=root TaxID=1 RepI... [more]
A0A662DUS6_9ACTN3.710e-10269.71PIG-L family deacetylase n=1 Tax=Actinomycetia bac... [more]
A0A6I3C743_9ACTN4.770e-10170.19PIG-L family deacetylase n=2 Tax=root TaxID=1 RepI... [more]
A0A6I3AGY0_9ACTN1.110e-10073.08PIG-L family deacetylase n=4 Tax=root TaxID=1 RepI... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10612contigP-wetherbeei_contig10612:2..628 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1313172.YM304_14930
PFAMsPIG-L
Model size627
Max annot lvl84992|Acidimicrobiia
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.15e-97
EggNOG OGsCOG2120@1|root,COG2120@2|Bacteria,2IR6Y@201174|Actinobacteria,4CN50@84992|Acidimicrobiia
DescriptionGlcNAc-PI de-N-acetylase
Cds size627
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185877.559538-CDS-P-wetherbeei_contig10612:1..6281683185877.559538-CDS-P-wetherbeei_contig10612:1..628Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10612 2..628 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10612.1.1prot_P-wetherbeei_contig10612.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig10612 2..628 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig10612.1.1

>prot_P-wetherbeei_contig10612.1.1 ID=prot_P-wetherbeei_contig10612.1.1|Name=mRNA_P-wetherbeei_contig10612.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=209bp
AAAGCVVHHLVCTDGSKGTWNPDADVVALAATRQVEQREAARRLAGANAG
TVHFLGAVDGELDSGLAMRGEVARVIREVRPQVVLGHDPWKRYRIHPDHR
HAGLLACEGVVAARDPHFFREQGLAPHRPDALLLWEADEPHHVEDVSGFV
DVKLHALEAHASQFESTMKAVDGAQLDAFRERIANRLRSTGEVYGVDAAE
VFATIIDL*
back to top

mRNA from alignment at P-wetherbeei_contig10612:2..628+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig10612.1.1 ID=mRNA_P-wetherbeei_contig10612.1.1|Name=mRNA_P-wetherbeei_contig10612.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=627bp|location=Sequence derived from alignment at P-wetherbeei_contig10612:2..628+ (Phaeothamnion wetherbeei SAG_119_79)
GCCGCCGCCGGATGCGTCGTCCACCACCTCGTGTGCACCGACGGCTCGAA GGGCACGTGGAACCCCGATGCCGACGTCGTCGCGCTCGCCGCGACGCGTC AGGTCGAGCAACGCGAAGCTGCTCGACGGCTGGCCGGCGCGAACGCCGGC ACGGTGCACTTCCTCGGCGCGGTGGACGGCGAGCTCGACAGCGGCCTGGC GATGCGCGGCGAGGTGGCCCGCGTCATCCGCGAGGTGCGCCCGCAGGTGG TGCTCGGCCACGACCCGTGGAAGCGGTACCGCATCCACCCCGATCACCGT CACGCCGGTCTGCTGGCGTGCGAGGGCGTCGTCGCCGCGCGCGACCCGCA CTTCTTCCGCGAGCAGGGCCTGGCGCCGCACCGGCCCGACGCGTTGCTGC TGTGGGAGGCCGACGAGCCGCACCACGTGGAAGACGTCAGTGGCTTCGTC GACGTCAAGCTGCACGCCCTCGAAGCGCACGCAAGCCAGTTCGAGAGCAC GATGAAGGCCGTCGACGGAGCGCAGCTCGATGCGTTCCGCGAACGCATCG CCAACCGCCTGCGCAGCACCGGCGAGGTCTACGGCGTCGACGCCGCCGAG GTGTTCGCGACCATCATCGACCTCTGA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig10612:2..628+

>mRNA_P-wetherbeei_contig10612.1.1 ID=mRNA_P-wetherbeei_contig10612.1.1|Name=mRNA_P-wetherbeei_contig10612.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=627bp|location=Sequence derived from alignment at P-wetherbeei_contig10612:2..628+ (Phaeothamnion wetherbeei SAG_119_79)
GCCGCCGCCGGATGCGTCGTCCACCACCTCGTGTGCACCGACGGCTCGAA
GGGCACGTGGAACCCCGATGCCGACGTCGTCGCGCTCGCCGCGACGCGTC
AGGTCGAGCAACGCGAAGCTGCTCGACGGCTGGCCGGCGCGAACGCCGGC
ACGGTGCACTTCCTCGGCGCGGTGGACGGCGAGCTCGACAGCGGCCTGGC
GATGCGCGGCGAGGTGGCCCGCGTCATCCGCGAGGTGCGCCCGCAGGTGG
TGCTCGGCCACGACCCGTGGAAGCGGTACCGCATCCACCCCGATCACCGT
CACGCCGGTCTGCTGGCGTGCGAGGGCGTCGTCGCCGCGCGCGACCCGCA
CTTCTTCCGCGAGCAGGGCCTGGCGCCGCACCGGCCCGACGCGTTGCTGC
TGTGGGAGGCCGACGAGCCGCACCACGTGGAAGACGTCAGTGGCTTCGTC
GACGTCAAGCTGCACGCCCTCGAAGCGCACGCAAGCCAGTTCGAGAGCAC
GATGAAGGCCGTCGACGGAGCGCAGCTCGATGCGTTCCGCGAACGCATCG
CCAACCGCCTGCGCAGCACCGGCGAGGTCTACGGCGTCGACGCCGCCGAG
GTGTTCGCGACCATCATCGACCTCTGA
back to top