mRNA_P-wetherbeei_contig10507.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig10507.1.1 vs. uniprot
Match: A0A519FNR6_9BURK (Tripartite tricarboxylate transporter substrate binding protein n=3 Tax=Burkholderiales TaxID=80840 RepID=A0A519FNR6_9BURK) HSP 1 Score: 424 bits (1090), Expect = 4.880e-148 Identity = 210/233 (90.13%), Postives = 223/233 (95.71%), Query Frame = 1 Query: 1 MAVNSTMTINPSLYAKLPFDPLKDFAPVSMVFTSSNVLVVNANSPVKSVKELIEYARSRPGAVFYGSAGNGSTPHLSGEMFRQMSGVPVVHVPYRGSGPAISDLLGGQLDFMFVDTSVLPQVAAGRLRALAVTGKTRLGAAPDLPTMEEAGLKGFYIDTWYSLAAPAGTPPDVVERLNAEVAKMVASPAVRERMRGIGVDPAVDTSAKYIDEIVRTDTARWKKFIAGTRIRLD 699 MAVNSTMTINPSLYA LPFDPLKD+APVSMVFTSSNVLVVNA+SPVKSVK+LIEYAR+RPG VFYGSAGNGSTPHLSGEMFRQ+SGVPVVHVPYRG+GPAISDLLGGQLDFMFVDTSVL V AGRLRALAVTGK RLG AP+LPTMEE GLKGFYIDTWYSLAAPAGTPPDV++RLNAEVAKMVASPAVRERMR +GVDPA DTSAKYID+IVR+DTARWKKFI+GTRIRLD Sbjct: 91 MAVNSTMTINPSLYASLPFDPLKDYAPVSMVFTSSNVLVVNASSPVKSVKDLIEYARARPGKVFYGSAGNGSTPHLSGEMFRQLSGVPVVHVPYRGAGPAISDLLGGQLDFMFVDTSVLTHVKAGRLRALAVTGKARLGVAPELPTMEEVGLKGFYIDTWYSLAAPAGTPPDVIDRLNAEVAKMVASPAVRERMRNVGVDPATDTSAKYIDQIVRSDTARWKKFISGTRIRLD 323
BLAST of mRNA_P-wetherbeei_contig10507.1.1 vs. uniprot
Match: A0A6P2EZZ2_9BURK (Argininosuccinate lyase n=1 Tax=Variovorax sp. PBL-H6 TaxID=434009 RepID=A0A6P2EZZ2_9BURK) HSP 1 Score: 390 bits (1003), Expect = 8.470e-135 Identity = 191/233 (81.97%), Postives = 214/233 (91.85%), Query Frame = 1 Query: 1 MAVNSTMTINPSLYAKLPFDPLKDFAPVSMVFTSSNVLVVNANSPVKSVKELIEYARSRPGAVFYGSAGNGSTPHLSGEMFRQMSGVPVVHVPYRGSGPAISDLLGGQLDFMFVDTSVLPQVAAGRLRALAVTGKTRLGAAPDLPTMEEAGLKGFYIDTWYSLAAPAGTPPDVVERLNAEVAKMVASPAVRERMRGIGVDPAVDTSAKYIDEIVRTDTARWKKFIAGTRIRLD 699 MAVNSTMTINPSLY KLPFDPLKDF+PVSMVFTSSNVLVVNANSPVKSVK+LIE A+S+PG VFYGSAGNGSTPHLSGEMFRQ++GVPVVHVPYRGSGPA+ DLLGGQLDFMFVDT+VLPQV AGRLRALAVTGK RLGAAPD+PTMEE G+KGF++DTWYSLAAPAGT P+ +ERLNA V MV +P++R RM+ IGVDP DTS+KY++ IV +DTARWKKFIAGTRI+LD Sbjct: 91 MAVNSTMTINPSLYDKLPFDPLKDFSPVSMVFTSSNVLVVNANSPVKSVKDLIELAKSKPGKVFYGSAGNGSTPHLSGEMFRQLTGVPVVHVPYRGSGPAVVDLLGGQLDFMFVDTAVLPQVRAGRLRALAVTGKVRLGAAPDIPTMEEEGVKGFFVDTWYSLAAPAGTAPEAIERLNAAVDAMVKTPSIRARMKDIGVDPPEDTSSKYMNRIVVSDTARWKKFIAGTRIKLD 323
BLAST of mRNA_P-wetherbeei_contig10507.1.1 vs. uniprot
Match: A0A1I5NVM7_9BURK (Tripartite-type tricarboxylate transporter, receptor component TctC n=1 Tax=Variovorax sp. 770b2 TaxID=1566271 RepID=A0A1I5NVM7_9BURK) HSP 1 Score: 389 bits (999), Expect = 3.210e-134 Identity = 188/233 (80.69%), Postives = 213/233 (91.42%), Query Frame = 1 Query: 1 MAVNSTMTINPSLYAKLPFDPLKDFAPVSMVFTSSNVLVVNANSPVKSVKELIEYARSRPGAVFYGSAGNGSTPHLSGEMFRQMSGVPVVHVPYRGSGPAISDLLGGQLDFMFVDTSVLPQVAAGRLRALAVTGKTRLGAAPDLPTMEEAGLKGFYIDTWYSLAAPAGTPPDVVERLNAEVAKMVASPAVRERMRGIGVDPAVDTSAKYIDEIVRTDTARWKKFIAGTRIRLD 699 MAVNSTMTINPSLYAKLPFDPLKDFAPVSMV+TSSNVLVVN++SPVKSVK+LI A++RPG +FYGSAGNGSTPHLSGEMFRQ++GVPVVHVPY+GSGPA+ DLLGGQLDFMFVDT+VLPQV GRLRALAVTGK RLGA PD+PTMEE G+KGF++DTWYSLAAPAGTPP+ +E+LNA VA M+A P VR RM+ IGVDP DTSA+Y+D IVR+DTARWKKFIAGT I+LD Sbjct: 89 MAVNSTMTINPSLYAKLPFDPLKDFAPVSMVYTSSNVLVVNSSSPVKSVKDLIALAKARPGKIFYGSAGNGSTPHLSGEMFRQLTGVPVVHVPYKGSGPAVVDLLGGQLDFMFVDTAVLPQVHGGRLRALAVTGKKRLGALPDIPTMEEEGVKGFFVDTWYSLAAPAGTPPEAIEKLNAAVAAMIAQPTVRARMKDIGVDPPEDTSARYMDTIVRSDTARWKKFIAGTDIKLD 321
BLAST of mRNA_P-wetherbeei_contig10507.1.1 vs. uniprot
Match: UPI00097C6B59 (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Variovorax sp. KK3 TaxID=1855728 RepID=UPI00097C6B59) HSP 1 Score: 368 bits (944), Expect = 7.970e-126 Identity = 178/233 (76.39%), Postives = 206/233 (88.41%), Query Frame = 1 Query: 1 MAVNSTMTINPSLYAKLPFDPLKDFAPVSMVFTSSNVLVVNANSPVKSVKELIEYARSRPGAVFYGSAGNGSTPHLSGEMFRQMSGVPVVHVPYRGSGPAISDLLGGQLDFMFVDTSVLPQVAAGRLRALAVTGKTRLGAAPDLPTMEEAGLKGFYIDTWYSLAAPAGTPPDVVERLNAEVAKMVASPAVRERMRGIGVDPAVDTSAKYIDEIVRTDTARWKKFIAGTRIRLD 699 MAVNSTM INP LY+KLPFDP+KDFAPVSM+FT+SNVLVVNA+SPV SVK+LI A+++PG + YGSAGNGSTPHLSGEMFRQ++G PVVHVPYRGSGPAI DLLGGQLDF+FVDTSVLPQV AG+LRALAVTG RLGAAP+LPTMEE G+KGF +DTWYS+ APAGTPP+ V+RLN E+AKM+A PAVR+RMR IGVDPA DTSA Y+ + ++ D+ARWKKFI T IRLD Sbjct: 91 MAVNSTMAINPHLYSKLPFDPVKDFAPVSMIFTNSNVLVVNASSPVHSVKDLIAMAKAKPGRINYGSAGNGSTPHLSGEMFRQLTGSPVVHVPYRGSGPAIVDLLGGQLDFLFVDTSVLPQVRAGKLRALAVTGPKRLGAAPELPTMEEEGVKGFVVDTWYSICAPAGTPPEAVKRLNEEIAKMLADPAVRQRMRDIGVDPAEDTSAAYLQKTIQADSARWKKFIQSTDIRLD 323
BLAST of mRNA_P-wetherbeei_contig10507.1.1 vs. uniprot
Match: A0A1H4H9V9_9BURK (Tripartite-type tricarboxylate transporter, receptor component TctC n=3 Tax=unclassified Variovorax TaxID=663243 RepID=A0A1H4H9V9_9BURK) HSP 1 Score: 364 bits (934), Expect = 2.640e-124 Identity = 172/233 (73.82%), Postives = 205/233 (87.98%), Query Frame = 1 Query: 1 MAVNSTMTINPSLYAKLPFDPLKDFAPVSMVFTSSNVLVVNANSPVKSVKELIEYARSRPGAVFYGSAGNGSTPHLSGEMFRQMSGVPVVHVPYRGSGPAISDLLGGQLDFMFVDTSVLPQVAAGRLRALAVTGKTRLGAAPDLPTMEEAGLKGFYIDTWYSLAAPAGTPPDVVERLNAEVAKMVASPAVRERMRGIGVDPAVDTSAKYIDEIVRTDTARWKKFIAGTRIRLD 699 MAVNSTM INP LY+KLPFDP+KDFAPVSM+FT++NVLVVNA+SPV+SVK+LI YA++ PG V YGSAGNGSTPHLSGEMFRQ++G PVVHVPY+G+GPAI DLLGGQ+DF+FVDTSVLPQV +G+LRALAVTG+TRLGAAP+L TMEE G+KGF +DTWYS+ APAGTPP+ V+RLN E+AKM+A P VR RMR +GVDPA DTSA Y+ + ++ D+ARWKKFI T I LD Sbjct: 91 MAVNSTMAINPHLYSKLPFDPVKDFAPVSMIFTNANVLVVNASSPVRSVKDLIAYAKANPGKVNYGSAGNGSTPHLSGEMFRQLTGAPVVHVPYKGAGPAIVDLLGGQIDFLFVDTSVLPQVRSGKLRALAVTGRTRLGAAPELRTMEEEGVKGFVVDTWYSICAPAGTPPEAVQRLNTEIAKMLADPTVRRRMRDVGVDPAEDTSAAYLQKTIQADSARWKKFIQSTNIHLD 323
BLAST of mRNA_P-wetherbeei_contig10507.1.1 vs. uniprot
Match: A0A6P2FD75_9BURK (Argininosuccinate lyase n=1 Tax=Variovorax sp. PBS-H4 TaxID=434008 RepID=A0A6P2FD75_9BURK) HSP 1 Score: 357 bits (917), Expect = 9.160e-122 Identity = 171/233 (73.39%), Postives = 206/233 (88.41%), Query Frame = 1 Query: 1 MAVNSTMTINPSLYAKLPFDPLKDFAPVSMVFTSSNVLVVNANSPVKSVKELIEYARSRPGAVFYGSAGNGSTPHLSGEMFRQMSGVPVVHVPYRGSGPAISDLLGGQLDFMFVDTSVLPQVAAGRLRALAVTGKTRLGAAPDLPTMEEAGLKGFYIDTWYSLAAPAGTPPDVVERLNAEVAKMVASPAVRERMRGIGVDPAVDTSAKYIDEIVRTDTARWKKFIAGTRIRLD 699 MAVNSTMT+NPSLYA LPFDPLKDFAPVSM+FT++NVLVVN+NSPV+SV++L+ A+++PG V YGSAGNGSTPHLSGEMFRQ++G PVVH+PY+G+ PAI+DLL GQLDF+ VDTSVLP V +GRLRALAVTG RLGAAP+LPTM+EAG+ GF +DTWYSLAAPAGTP DV+++LNA VAK +A PAVR RM+ IGVDPA DTSA Y+ +++ +DTARW+KFI GT IRLD Sbjct: 88 MAVNSTMTVNPSLYATLPFDPLKDFAPVSMIFTNANVLVVNSNSPVRSVQDLVALAKAKPGRVNYGSAGNGSTPHLSGEMFRQLTGAPVVHIPYKGAAPAITDLLAGQLDFVMVDTSVLPHVKSGRLRALAVTGARRLGAAPELPTMQEAGVPGFLVDTWYSLAAPAGTPDDVIQKLNAAVAKALADPAVRTRMQSIGVDPADDTSAAYLRKVMVSDTARWRKFIKGTNIRLD 320
BLAST of mRNA_P-wetherbeei_contig10507.1.1 vs. uniprot
Match: UPI0017E4E392 (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Frateuria sp. TaxID=2211372 RepID=UPI0017E4E392) HSP 1 Score: 355 bits (910), Expect = 1.180e-120 Identity = 170/233 (72.96%), Postives = 200/233 (85.84%), Query Frame = 1 Query: 1 MAVNSTMTINPSLYAKLPFDPLKDFAPVSMVFTSSNVLVVNANSPVKSVKELIEYARSRPGAVFYGSAGNGSTPHLSGEMFRQMSGVPVVHVPYRGSGPAISDLLGGQLDFMFVDTSVLPQVAAGRLRALAVTGKTRLGAAPDLPTMEEAGLKGFYIDTWYSLAAPAGTPPDVVERLNAEVAKMVASPAVRERMRGIGVDPAVDTSAKYIDEIVRTDTARWKKFIAGTRIRLD 699 MAVNSTMTINP+LYAKLPFDPLKDF PVSMVFT++NVLVVNANSPVKSV++L+ YA+ G V YGSAGNGSTPHLSGEMFR ++G PVVHVPYRG+GPAI DLLGG LD VDTSVL V AG+LRALAVTG RLG AP+LPTMEEAG+KGFY+DTWYSL APAGTPPDV++RL+ E A+M+A PAVRERMR IGVDPA + A+++ +++ +DT RWKKF++ T IR+D Sbjct: 91 MAVNSTMTINPNLYAKLPFDPLKDFTPVSMVFTNANVLVVNANSPVKSVQDLVAYAKKNAGKVNYGSAGNGSTPHLSGEMFRLLTGAPVVHVPYRGAGPAIVDLLGGPLDIAIVDTSVLTHVKAGKLRALAVTGNKRLGVAPELPTMEEAGVKGFYVDTWYSLVAPAGTPPDVIKRLSTEAARMLADPAVRERMRSIGVDPAEEAGAEHLQKVIHSDTERWKKFLSTTNIRVD 323
BLAST of mRNA_P-wetherbeei_contig10507.1.1 vs. uniprot
Match: A0A556AJJ3_9BURK (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Verticiella sediminum TaxID=1247510 RepID=A0A556AJJ3_9BURK) HSP 1 Score: 312 bits (799), Expect = 7.710e-104 Identity = 150/233 (64.38%), Postives = 188/233 (80.69%), Query Frame = 1 Query: 1 MAVNSTMTINPSLYAKLPFDPLKDFAPVSMVFTSSNVLVVNANSPVKSVKELIEYARSRPGAVFYGSAGNGSTPHLSGEMFRQMSGVPVVHVPYRGSGPAISDLLGGQLDFMFVDTSVLPQVAAGRLRALAVTGKTRLGAAPDLPTMEEAGLKGFYIDTWYSLAAPAGTPPDVVERLNAEVAKMVASPAVRERMRGIGVDPAVDTSAKYIDEIVRTDTARWKKFIAGTRIRLD 699 MAVNSTM INP+LY KL +DP+ DFAPV+MV SSN+LVVNA SP KS++ELI+YAR PG + +GS+GNG+TPHLSGEM ++++ V + HVPY+G GPA++DLLGGQ+DF+F DTS +PQV AGRLRALAVTG TRLG APD+PTM+EAGL F + TWYSL PAGTP DVV+RLN VA +V P V+ RM +GVDPA DTS++Y+D +R+D A WK+F+A T IRL+ Sbjct: 88 MAVNSTMAINPNLYPKLQYDPVGDFAPVAMVNASSNILVVNAASPFKSLQELIDYARQNPGKLNFGSSGNGATPHLSGEMLKRLADVKINHVPYKGIGPAVTDLLGGQIDFVFSDTSAMPQVQAGRLRALAVTGPTRLGIAPDIPTMQEAGLDDFIVRTWYSLVVPAGTPEDVVQRLNGAVAAVVKDPEVKARMVAVGVDPAEDTSSEYLDRTIRSDLAFWKQFMADTGIRLE 320
BLAST of mRNA_P-wetherbeei_contig10507.1.1 vs. uniprot
Match: A0A2E9BPC3_9BURK (ABC transporter substrate-binding protein n=3 Tax=unclassified Variovorax TaxID=663243 RepID=A0A2E9BPC3_9BURK) HSP 1 Score: 311 bits (798), Expect = 1.580e-102 Identity = 147/233 (63.09%), Postives = 187/233 (80.26%), Query Frame = 1 Query: 1 MAVNSTMTINPSLYAKLPFDPLKDFAPVSMVFTSSNVLVVNANSPVKSVKELIEYARSRPGAVFYGSAGNGSTPHLSGEMFRQMSGVPVVHVPYRGSGPAISDLLGGQLDFMFVDTSVLPQVAAGRLRALAVTGKTRLGAAPDLPTMEEAGLKGFYIDTWYSLAAPAGTPPDVVERLNAEVAKMVASPAVRERMRGIGVDPAVDTSAKYIDEIVRTDTARWKKFIAGTRIRLD 699 MAVNSTM INP++Y KL +DP+KDF+PV+MV+TS+NVL+VNA SP +SV +L+ YA++ PG + YGS+GNG+TPHLSGEMFR+M+G+ + HVPY+G GPAI DL+GGQ++ +F DTS + QV G LRALAVTG +RLG AP+LPTM+E G GF I +WYS+AAPAGTP VVERLNAE+AK+V SP +R+RM+ IGVDPA DTS Y+D R D A WKKF+ I+LD Sbjct: 171 MAVNSTMAINPAIYPKLQYDPIKDFSPVAMVYTSANVLMVNAKSPYRSVADLVSYAKANPGKLNYGSSGNGATPHLSGEMFRRMAGISINHVPYKGIGPAIVDLIGGQIELVFSDTSAMTQVTGGNLRALAVTGPSRLGMAPNLPTMQEQGFPGFSIRSWYSIAAPAGTPKAVVERLNAEIAKVVRSPEMRQRMKDIGVDPAEDTSVHYLDATTRADLAMWKKFVTEADIKLD 403
BLAST of mRNA_P-wetherbeei_contig10507.1.1 vs. uniprot
Match: A0A7Y6TWG0_9BURK (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Schlegelella koreensis TaxID=2742824 RepID=A0A7Y6TWG0_9BURK) HSP 1 Score: 300 bits (768), Expect = 4.750e-99 Identity = 143/233 (61.37%), Postives = 182/233 (78.11%), Query Frame = 1 Query: 1 MAVNSTMTINPSLYAKLPFDPLKDFAPVSMVFTSSNVLVVNANSPVKSVKELIEYARSRPGAVFYGSAGNGSTPHLSGEMFRQMSGVPVVHVPYRGSGPAISDLLGGQLDFMFVDTSVLPQVAAGRLRALAVTGKTRLGAAPDLPTMEEAGLKGFYIDTWYSLAAPAGTPPDVVERLNAEVAKMVASPAVRERMRGIGVDPAVDTSAKYIDEIVRTDTARWKKFIAGTRIRLD 699 MAVNSTM INP+LY K +DP++DF PV+MV+TSSN+LVVN SP SVK++I AR++PG + YGS+G+G TPHLSGEMF ++ V HVPY+G+GPA+ D++GGQ+D +F DTS LP +AAG+LR LAVTG RLGAAPDLPTMEE GL GF + TWYSL APAGTP D VER+ EVA+ +A PA R RMR I VDPA DTS KY++ ++R+D A+W++FI IR++ Sbjct: 94 MAVNSTMAINPNLYEKPGYDPIRDFTPVAMVYTSSNILVVNPKSPFHSVKDVIAAARAQPGKLTYGSSGHGGTPHLSGEMFNLLAKVETTHVPYKGAGPAMIDVMGGQIDMIFGDTSSLPHIAAGKLRGLAVTGARRLGAAPDLPTMEEEGLPGFVVTTWYSLMAPAGTPADAVERIGREVARFLALPAARARMRDIAVDPAEDTSPKYLESVLRSDLAKWRRFIGEKGIRIN 326 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10507.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig10507.1.1 >prot_P-wetherbeei_contig10507.1.1 ID=prot_P-wetherbeei_contig10507.1.1|Name=mRNA_P-wetherbeei_contig10507.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=234bp MAVNSTMTINPSLYAKLPFDPLKDFAPVSMVFTSSNVLVVNANSPVKSVKback to top mRNA from alignment at P-wetherbeei_contig10507:2..703+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig10507.1.1 ID=mRNA_P-wetherbeei_contig10507.1.1|Name=mRNA_P-wetherbeei_contig10507.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=702bp|location=Sequence derived from alignment at P-wetherbeei_contig10507:2..703+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig10507:2..703+ >mRNA_P-wetherbeei_contig10507.1.1 ID=mRNA_P-wetherbeei_contig10507.1.1|Name=mRNA_P-wetherbeei_contig10507.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=702bp|location=Sequence derived from alignment at P-wetherbeei_contig10507:2..703+ (Phaeothamnion wetherbeei SAG_119_79)back to top |