mRNA_P-wetherbeei_contig10496.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig10496.2.1
Unique NamemRNA_P-wetherbeei_contig10496.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig10496.2.1 vs. uniprot
Match: UPI0007F988F8 (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Bordetella bronchialis TaxID=463025 RepID=UPI0007F988F8)

HSP 1 Score: 318 bits (815), Expect = 9.620e-105
Identity = 163/318 (51.26%), Postives = 220/318 (69.18%), Query Frame = 1
Query:   37 AHVLAFAMGTANAQSD-------KPVSIIVPFPPGGVVDVVGRLLADGMSSAMGARVIVENRPGAGGTIGATAVAKAAPDGRTLLLGGAATHVFSPLLYPNLAYTPERSFAPVSQVSTGPLVLVLPSGSVVSTMGEFLALAKTQGDRLNYASNGSGTYPHLAAELFRRAVGGKFVHVPYAGGSQAGVALASGEVGFSINHIPVVLPFIKSGKVRAIATTGTKRSASFPDLPTFGESGLKGYEASPWFGVFAPAGTPPAAIDKLSGVITKVVTSGTFRERLAAYGDEAVGGSPQELDALLRSELAKWPTVVRDAEVKAN 969
            A +LA A+GTA   S        +P++++VPFP GGVVDVV R++   M+ A+GA ++VEN+PGAGGTIGA  V+KAAPDG TLLLGG+AT VF P LY NL Y    +FAPV Q+S+GPLVLV+ S    +T+ E ++  K Q D+  Y SNG+GT+P LAAELF++A G    H+PY GG  A  AL +G++ FSINHIPVV   +K GK+RA+ATTG KRS +FPDLPT  E+G+ G+EA  W+G+FAPAGTP +A+DKL+  +   +     +  LAA GDE +  SPQ+    +++E  KW  VV+ A++K +
Sbjct:    7 AALLALALGTAVTASQAAESYPSRPINLVVPFPAGGVVDVVARMVGQKMAGALGASIVVENKPGAGGTIGAAYVSKAAPDGYTLLLGGSATQVFGPALYKNLPYDARTAFAPVGQISSGPLVLVVGSTVKANTVPELVSYLKGQQDKAFYGSNGNGTFPQLAAELFKQANGLSTAHIPYNGGPAAMTALVAGDIAFSINHIPVVQGLVKGGKIRALATTGAKRSVAFPDLPTMQEAGMPGFEAGAWWGLFAPAGTPASAVDKLNMALKAALEDKAVQASLAAQGDEVLYSSPQDFGRFVQAETRKWTQVVKSADLKID 324          
BLAST of mRNA_P-wetherbeei_contig10496.2.1 vs. uniprot
Match: A0A3S2VWM7_9BURK (Tripartite tricarboxylate transporter substrate binding protein n=2 Tax=Rubrivivax albus TaxID=2499835 RepID=A0A3S2VWM7_9BURK)

HSP 1 Score: 313 bits (801), Expect = 4.070e-101
Identity = 164/306 (53.59%), Postives = 210/306 (68.63%), Query Frame = 1
Query:   61 GTANAQS---DKPVSIIVPFPPGGVVDVVGRLLADGMSSAMGARVIVENRPGAGGTIGATAVAKAAPDGRTLLLGGAATHVFSPLLYPNLAYTPERSFAPVSQVSTGPLVLVLPSGSVVSTMGEFLALAKTQGDRLNYASNGSGTYPHLAAELFRRAVGGKFVHVPYAGGSQAGVALASGEVGFSINHIPVVLPFIKSGKVRAIATTGTKRSASFPDLPTFGESGLKGYEASPWFGVFAPAGTPPAAIDKLSGVITKVVTSGTFRERLAAYGDEAVGGSPQELDALLRSELAKWPTVVRDAEVKAN 969
            G A+AQ+   ++ V ++VPFPP GVVD++GR+LADG+ +A+   V+VENR GAGGT+GA  VA AA DG TLL+GGAATH F+P ++  L Y P + F  VSQVS+GPLVLV+ + S + T  +F  +A   G+ LNYASNG GTYPHLA EL ++  G K  HVPY GG QA VAL SGEV +S+NHIPVVL  IK+GK+RA+ATTG  RS  FPDLPT  E G+    A PWFGVFAPAGTP A +DKL+  + + + S    E+LA+ GD+     P E  A   +EL KW  V++ A + A 
Sbjct:  129 GPAHAQAWPGNQIVKLVVPFPPAGVVDIIGRMLADGLQAALPGTVVVENRVGAGGTVGAQHVAGAASDGLTLLMGGAATHAFAPSIFSQLRYDPVKDFVAVSQVSSGPLVLVVNASSPIQTFDDFKRVATEGGNTLNYASNGVGTYPHLAVELLKQQTGLKTTHVPYKGGGQATVALLSGEVNYSLNHIPVVLSQIKAGKLRALATTGGARSPLFPDLPTLNERGID-VVAEPWFGVFAPAGTPKALVDKLADAVARAMGSAAIHEKLASLGDQVTVAGPSEFAAFQAAELGKWSRVIQAAGITAR 433          
BLAST of mRNA_P-wetherbeei_contig10496.2.1 vs. uniprot
Match: A0A6P2FPN5_9BURK (Argininosuccinate lyase n=1 Tax=Variovorax sp. PBS-H4 TaxID=434008 RepID=A0A6P2FPN5_9BURK)

HSP 1 Score: 303 bits (776), Expect = 8.800e-99
Identity = 162/318 (50.94%), Postives = 210/318 (66.04%), Query Frame = 1
Query:   22 KAMLLAHVLAFAMGT--ANAQSDKPVSIIVPFPPGGVVDVVGRLLADGMSSAMGARVIVENRPGAGGTIGATAVAKAAPDGRTLLLGGAATHVFSPLLYPNLAYTPERSFAPVSQVSTGPLVLVLPSGSVVSTMGEFLALAKTQGDRLNYASNGSGTYPHLAAELFRRAVGGKFVHVPYAGGSQAGVALASGEVGFSINHIPVVLPFIKSGKVRAIATTGTKRSASFPDLPTFGESGLKGYEASPWFGVFAPAGTPPAAIDKLSGVITKVVTSGTFRERLAAYGDEAVGGSPQELDALLRSELAKWPTVVRDAEVKAN 969
            +A++     A+AM T        +PVSI+VPFP GGVVDVV R++   MS A+GA VIVEN+PGAGGTIGA   AKA PDG T+LLGG+AT VF P LY NL Y  ++ F PV Q+S+GPLVLV  S    + + +     K QG R  Y SNG+GT+P LAAELF++A      H+PY GG  A  AL +G++ FSINHIPVV   +K+GKVRA+ATTG KRS +FPDLPT  E+G+KG EA+ W+G+FAPAGTP   + KL+  +   +     R  L A GDE    SP + DA + +E AKW  VV+ A+++ +
Sbjct:   11 RALMAFAAAAYAMPTWAQGKYPSRPVSIVVPFPAGGVVDVVARMVGQKMSIALGAPVIVENKPGAGGTIGAAYAAKAKPDGYTVLLGGSATQVFGPALYRNLQYDAKKDFVPVGQISSGPLVLVTGSKVPATDVPQLTKYLKEQGVRAFYGSNGNGTFPQLAAELFKQANHLTSAHIPYGGGPAALTALITGDIAFSINHIPVVQAMVKAGKVRALATTGKKRSVAFPDLPTLDEAGMKGVEANAWWGLFAPAGTPGDVVQKLNDALAAALKDPAVRMGLEAQGDEVAYSSPSDFDAFVNAESAKWTRVVKLADLRLD 328          
BLAST of mRNA_P-wetherbeei_contig10496.2.1 vs. uniprot
Match: A0A1E3ZBZ2_9BORD (Uncharacterized protein n=2 Tax=Burkholderiales TaxID=80840 RepID=A0A1E3ZBZ2_9BORD)

HSP 1 Score: 301 bits (771), Expect = 5.020e-98
Identity = 153/309 (49.51%), Postives = 210/309 (67.96%), Query Frame = 1
Query:   46 LAFAMGTANAQSD----KPVSIIVPFPPGGVVDVVGRLLADGMSSAMGARVIVENRPGAGGTIGATAVAKAAPDGRTLLLGGAATHVFSPLLYPNLAYTPERSFAPVSQVSTGPLVLVLPSGSVVSTMGEFLALAKTQGDRLNYASNGSGTYPHLAAELFRRAVGGKFVHVPYAGGSQAGVALASGEVGFSINHIPVVLPFIKSGKVRAIATTGTKRSASFPDLPTFGESGLKGYEASPWFGVFAPAGTPPAAIDKLSGVITKVVTSGTFRERLAAYGDEAVGGSPQELDALLRSELAKWPTVVRDAEV 960
            L   M  A AQ      KP++++VPFPPGGVVD++GRL+++ + ++M A VIVENRPGAGGTIGA   A+A PDG TLLLGG+ATHVF+PLLY  L Y P + FA + Q+S  PL +V+     V+T+ E ++  K  G+++NY SNG+GT+P LA EL ++    +  HVP+ GG     AL  G++  SINHI VV   +KSGK++AIATTG +R+ +FPDLPTF E+G+KG+EA+ WFG+FAP GTP   I KL   +   + + T R +L   G+EA   +PQELD  +  E AKW  V++DA++
Sbjct:   17 LLLGMSGAWAQDQDYPSKPITLVVPFPPGGVVDIIGRLVSEKLGASMKATVIVENRPGAGGTIGAGMAARAKPDGYTLLLGGSATHVFAPLLYARLGYNPLKDFAAIGQISASPLAVVVSPTIQVNTLPELISYLKANGNKVNYGSNGNGTFPQLAQELLKQQYNLQTTHVPFGGGPAVMTALIRGDIAMSINHIAVVQGMVKSGKLKAIATTGKERTPAFPDLPTFEEAGVKGFEANTWFGLFAPQGTPQPIIAKLGAELKAALANETLRTQLLKQGEEAKTSTPQELDNRIEVESAKWAKVIKDAKI 325          
BLAST of mRNA_P-wetherbeei_contig10496.2.1 vs. uniprot
Match: A0A6P2ERT9_9BURK (Argininosuccinate lyase n=2 Tax=Variovorax sp. PBL-E5 TaxID=434014 RepID=A0A6P2ERT9_9BURK)

HSP 1 Score: 300 bits (768), Expect = 1.250e-97
Identity = 157/307 (51.14%), Postives = 205/307 (66.78%), Query Frame = 1
Query:   49 AFAMGTANAQSDKPVSIIVPFPPGGVVDVVGRLLADGMSSAMGARVIVENRPGAGGTIGATAVAKAAPDGRTLLLGGAATHVFSPLLYPNLAYTPERSFAPVSQVSTGPLVLVLPSGSVVSTMGEFLALAKTQGDRLNYASNGSGTYPHLAAELFRRAVGGKFVHVPYAGGSQAGVALASGEVGFSINHIPVVLPFIKSGKVRAIATTGTKRSASFPDLPTFGESGLKGYEASPWFGVFAPAGTPPAAIDKLSGVITKVVTSGTFRERLAAYGDEAVGGSPQELDALLRSELAKWPTVVRDAEVKAN 969
            A   G   A   +PV+++VPF  GGVVDVV R++   MS A+G  V+VEN+PGAGGTIGAT VAKA PDG T+LLGG+AT VF P LY NL Y  ++ FAPV Q+S+GPLVLV  S      + E     K QG R  YASNG+GT+PHLAAELF++A      H+PY+GG  A  AL SG+V FSINHIPVV   +K+GK+RA+ATTG KRS +FP LPT  ESG+KG+EA+ W+G+FAPAGT    + +L+  +   +     R  L A GDE     P++  A +++E  KW  VV+ A+++ +
Sbjct:   18 ALPAGAQQAFPSRPVTLVVPFAAGGVVDVVARMVGQKMSIALGQPVVVENKPGAGGTIGATYVAKAKPDGYTILLGGSATQVFGPALYKNLHYDAKKDFAPVGQISSGPLVLVTGSKVPAVDVAELTKYLKEQGVRAFYASNGNGTFPHLAAELFKQANKLSTAHIPYSGGPAALTALISGDVAFSINHIPVVQAMVKAGKIRALATTGKKRSVAFPHLPTLDESGMKGFEANAWWGLFAPAGTAAGVVKQLNTALATALKDPAVRTALEAQGDEVAYSGPKDFAAFVQAESIKWTQVVKIADLRLD 324          
BLAST of mRNA_P-wetherbeei_contig10496.2.1 vs. uniprot
Match: A0A437RGT0_9BURK (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Aquincola rivuli TaxID=1862385 RepID=A0A437RGT0_9BURK)

HSP 1 Score: 288 bits (738), Expect = 4.320e-93
Identity = 154/317 (48.58%), Postives = 209/317 (65.93%), Query Frame = 1
Query:   28 MLLAHVLAFAMGTANAQS---DKPVSIIVPFPPGGVVDVVGRLLADGMSSAMGARVIVENRPGAGGTIGATAVAKAAPDGRTLLLGGAATHVFSPLLYPNLAYTPERSFAPVSQVSTGPLVLVLPSGSVVSTMGEFLALAKTQGDRLNYASNGSGTYPHLAAELFRRAVGGKFVHVPYAGGSQAGVALASGEVGFSINHIPVVLPFIKSGKVRAIATTGTKRSASFPDLPTFGESGLKGYEASPWFGVFAPAGTPPAAIDKLSGVITKVVTSGTFRERLAAYGDEAVGGSPQELDALLRSELAKWPTVVRDAEVKAN 969
            +LLA   A     A AQ    ++PVSI+VPFP GGVVD+V R +   M++A+GA V+VEN+ GAGGTIGA  V+KA PDG TLLLGG+AT VF P LY  L Y  ++ F PV Q+S+GPLVLV  S    + + +     K QG R  Y SNG+GT+P LAAELF++A      H+PY+GG  A  AL +G++ +SINHIPVV   +KSGK+RA+ATTG KRS +FP+LPT  E+G+KG+EA+ W+G+FAPAGT P  +  L+  +   +     R  L A GDE    +P++  A + +E  KW  VV+ A+++ +
Sbjct:    8 ILLAIAAATGAVPATAQDKYPNRPVSIVVPFPAGGVVDLVARTVGPKMAAALGAPVVVENKAGAGGTIGAAFVSKAKPDGYTLLLGGSATQVFGPALYKKLQYDAKKDFTPVGQISSGPLVLVTGSKVPATDVPQLTQYLKAQGVRAFYGSNGNGTFPQLAAELFKQANQLPSAHIPYSGGPGALTALIAGDIAYSINHIPVVQGMVKSGKLRALATTGRKRSVAFPNLPTLDEAGMKGFEANAWWGLFAPAGTSPEIVQALNEALAAALKDPAVRTALEAQGDEVSYSTPKDFAAFVNAESTKWTKVVKTADLQLD 324          
BLAST of mRNA_P-wetherbeei_contig10496.2.1 vs. uniprot
Match: UPI001BED1270 (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Variovorax paradoxus TaxID=34073 RepID=UPI001BED1270)

HSP 1 Score: 288 bits (736), Expect = 8.670e-93
Identity = 153/321 (47.66%), Postives = 208/321 (64.80%), Query Frame = 1
Query:   16 FCKAMLLAHVLAFAMGTANAQSD---KPVSIIVPFPPGGVVDVVGRLLADGMSSAMGARVIVENRPGAGGTIGATAVAKAAPDGRTLLLGGAATHVFSPLLYPNLAYTPERSFAPVSQVSTGPLVLVLPSGSVVSTMGEFLALAKTQGDRLNYASNGSGTYPHLAAELFRRAVGGKFVHVPYAGGSQAGVALASGEVGFSINHIPVVLPFIKSGKVRAIATTGTKRSASFPDLPTFGESGLKGYEASPWFGVFAPAGTPPAAIDKLSGVITKVVTSGTFRERLAAYGDEAVGGSPQELDALLRSELAKWPTVVRDAEVKAN 969
            F + +L A   A       AQ +   +PVSI+VPFP GGVVDVV R++   MS+A+GA +++EN+ GAGGTIGA  VAKA PDG T+LLGG+AT VF P+LY  L Y   + F PV Q+S+GPLVLV  S    + + +     + QG R  Y SNG+GT+PHLA E+F++A      H+PY+GG  A  AL SG++ FSINHIPV+   + SGK+RA+ATTG KRS +FPDLPT  E G+K +EAS W+G+FAPA TP   + KL+  +   +     R  L   GDE    SP++  A +++E AKW  VV+ A+++ +
Sbjct:    4 FRRQVLFAFAAAACAVPGWAQDNYPSRPVSIVVPFPAGGVVDVVARMVGQKMSAALGAPIVIENKAGAGGTIGAAYVAKARPDGYTILLGGSATQVFGPVLYKKLQYDASKDFVPVGQISSGPLVLVTGSKVPSTDVPQLTKYLREQGVRAFYGSNGNGTFPHLAGEMFKQANNLSSAHIPYSGGPAALTALISGDLAFSINHIPVIQGMVTSGKLRALATTGKKRSVAFPDLPTLNEVGMKDFEASAWWGLFAPAETPVEVVKKLNDALAVALKDPGVRAGLERQGDEVAYSSPKDFGAYVQAETAKWTKVVKIADLRLD 324          
BLAST of mRNA_P-wetherbeei_contig10496.2.1 vs. uniprot
Match: UPI001F390684 (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=unclassified Polynucleobacter TaxID=2640945 RepID=UPI001F390684)

HSP 1 Score: 287 bits (734), Expect = 1.630e-92
Identity = 148/312 (47.44%), Postives = 203/312 (65.06%), Query Frame = 1
Query:   28 MLLAHVLAFAMGTANAQSDKPVSIIVPFPPGGVVDVVGRLLADGMSSAMGARVIVENRPGAGGTIGATAVAKAAPDGRTLLLGGAATHVFSPLLYPNLAYTPERSFAPVSQVSTGPLVLVLPSGSVVSTMGEFLALAKTQGDRLNYASNGSGTYPHLAAELFRRAVGGKFVHVPYAGGSQAGVALASGEVGFSINHIPVVLPFIKSGKVRAIATTGTKRSASFPDLPTFGESGLKGYEASPWFGVFAPAGTPPAAIDKLSGVITKVVTSGTFRERLAAYGDEAVGGSPQELDALLRSELAKWPTVVRDAEVK 963
            +LL ++    +  A    +KP+ ++VP+PPGGVVD+ GRLLAD +S  +G +VIV N+PGAGGTIGA  VA+A  DG T++LGGAATH F+P +Y  L Y P + F  ++Q + GPL L +   S ++++ EF  + K +GD +NY+SNG GT+PHL+ EL ++  G K +H+PY GGSQA VA+ S EV F+ NH+PVVL   ++G+VR +ATTG  RS+  PD+PT  E G     AS WFG+FAPAGTP   I +L         S   RE+LA  GDE     P +  A  ++EL KW TV+  AE+K
Sbjct:   10 LLLFNLWISGLAVAQEYPNKPIQLVVPYPPGGVVDITGRLLADQLSRELGKQVIVVNKPGAGGTIGAEFVARAPADGYTIILGGAATHAFAPAMYKQLRYEPIKDFVAITQFTEGPLALTVNKASGIASIDEFFKILKNKGDSVNYSSNGIGTFPHLSVELLKQKTGTKAMHIPYPGGSQAVVAVLSNEVLFTQNHLPVVLTQAQAGRVRILATTGASRSSVLPDIPTLKEMGYD-IVASAWFGLFAPAGTPQPIIQRLYEATAAAAKSPALREKLALQGDEISVTGPTKFLAFQKNELDKWKTVITTAEIK 320          
BLAST of mRNA_P-wetherbeei_contig10496.2.1 vs. uniprot
Match: A0A1Q3R2P6_9BURK (Uncharacterized protein n=1 Tax=Burkholderiales bacterium 68-10 TaxID=1895730 RepID=A0A1Q3R2P6_9BURK)

HSP 1 Score: 268 bits (685), Expect = 4.660e-85
Identity = 145/312 (46.47%), Postives = 203/312 (65.06%), Query Frame = 1
Query:   37 AHVLAFAMGTANAQS-DKPVSIIVPFPPGGVVDVVGRLLADGMSSAMGARVIVENRPGAGGTIGATAVAKAAPDGRTLLLGGAATHVFSPLLYPNLAYTPERSFAPVSQVSTGPLVLVLPSGSVVSTMGEFLALAKTQGDRLNYASNGSGTYPHLAAELFRRAVGGKFVHVPYAGGSQAGVALASGEVGFSINHIPVVLPFIKSGKVRAIATTGTKRSASFPDLPTFGESGLKGYEASPWFGVFAPAGTPPAAIDKLSGVITKVVTSGTFRERLAAYGDEAVGGSPQELDALLRSELAKWPTVVRDAEVKAN 969
            A VLA A     AQ+  KPV ++VP P G   DV+ R +A  MS+ +G  V++ENRPGAGG+I +  VAKAAPDG TL+LG  ++H  +P LYP L Y   + FAP++ V+T P VLV+ +   V  + EF+A AK +  +L+ AS G+G+  HL+AELF+   G   VHVPY G +     LA+G+V   I +IP     +KSG+++A+ATTG +R+A+ P++PT  ESGLKGYE + WF + APA TP AAID+L G   K + +   RERLA  G   VG +P + DA +R+E+AK+  V++DA VK +
Sbjct:   15 ALVLALASSVVLAQAPSKPVRLVVPAPAGDGSDVLARAIAQEMSAGLGQPVLIENRPGAGGSIASDMVAKAAPDGHTLILGNGSSHGVTPSLYPRLPYDTLKDFAPITLVATAPNVLVVSASLPVGNVREFIAHAKARPGQLHIASGGNGSLSHLSAELFKSMAGVDLVHVPYKGAAPGLTDLAAGQVAAMIINIPSAQGLLKSGRLKALATTGQQRAAALPEVPTLDESGLKGYETTSWFALLAPARTPAAAIDRLQGETAKALATPAVRERLATMGLTPVGNTPAQFDAFMRAEIAKYAKVIKDAGVKID 326          
BLAST of mRNA_P-wetherbeei_contig10496.2.1 vs. uniprot
Match: UPI001F3A0034 (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Caenimonas soli TaxID=2735555 RepID=UPI001F3A0034)

HSP 1 Score: 265 bits (677), Expect = 1.030e-83
Identity = 140/299 (46.82%), Postives = 188/299 (62.88%), Query Frame = 1
Query:   67 ANAQSDKPVSIIVPFPPGGVVDVVGRLLADGMSSAMGARVIVENRPGAGGTIGATAVAKAAPDGRTLLLGGAATHVFSPLLYPNLAYTPERSFAPVSQVSTGPLVLVLPSGSVVSTMGEFLALAKTQGDRLNYASNGSGTYPHLAAELFRRAVGGKFVHVPYAGGSQAGVALASGEVGFSINHIPVVLPFIKSGKVRAIATTGTKRSASFPDLPTFGESGLKGYEASPWFGVFAPAGTPPAAIDKLSGVITKVVTSGTFRERLAAYGDEAVGGSPQELDALLRSELAKWPTVVRDAEVK 963
            A+   +KP+  IVP+PPGG  DV+ R LA+ MS +MG  ++VENR GAGG IGA  VAKAAPDG TLL+G    +  SP LYP L Y P + F P+S VS+ P+VLV       S M E +ALAK++  + NYAS G+G+  HLA EL +   G  F HV Y GGS A   L +G +  + + +PV LP +K+GKV+AIA  GTK S+  P+LPT  +SG+ GYEAS W G+ AP GTP   +DKL+  + + +     RE LA  G E VG +P++    + +E+ KW  VV +A +K
Sbjct:   36 AHGYPNKPIRFIVPYPPGGASDVLARALANKMSESMGQSIVVENRAGAGGNIGADVVAKAAPDGYTLLMGNIGPNAISPALYPKLPYDPIKDFTPISLVSSVPIVLVAHPSFPASNMKEVIALAKSKPGQFNYASAGNGSSNHLAMELLKSLAGVNFAHVAYKGGSPAMADLIAGHIQIAFDTLPVALPHVKAGKVKAIAFAGTKGSSVLPELPTIADSGVAGYEASSWGGLMAPGGTPRDVVDKLNLEVNRALGQPDVRESLAKLGIEPVGTTPEQFATYIEAEIKKWKRVVSEAGIK 334          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10496.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0007F988F89.620e-10551.26tripartite tricarboxylate transporter substrate bi... [more]
A0A3S2VWM7_9BURK4.070e-10153.59Tripartite tricarboxylate transporter substrate bi... [more]
A0A6P2FPN5_9BURK8.800e-9950.94Argininosuccinate lyase n=1 Tax=Variovorax sp. PBS... [more]
A0A1E3ZBZ2_9BORD5.020e-9849.51Uncharacterized protein n=2 Tax=Burkholderiales Ta... [more]
A0A6P2ERT9_9BURK1.250e-9751.14Argininosuccinate lyase n=2 Tax=Variovorax sp. PBL... [more]
A0A437RGT0_9BURK4.320e-9348.58Tripartite tricarboxylate transporter substrate bi... [more]
UPI001BED12708.670e-9347.66tripartite tricarboxylate transporter substrate bi... [more]
UPI001F3906841.630e-9247.44tripartite tricarboxylate transporter substrate bi... [more]
A0A1Q3R2P6_9BURK4.660e-8546.47Uncharacterized protein n=1 Tax=Burkholderiales ba... [more]
UPI001F3A00341.030e-8346.82tripartite tricarboxylate transporter substrate bi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10496contigP-wetherbeei_contig10496:1021..1992 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1095769.CAHF01000001_gene3565
PFAMsTctC
Model size972
Max annot lvl28216|Betaproteobacteria
Hectar predicted targeting categorysignal peptide
Exons1
Evalue4.84e-80
EggNOG OGsCOG3181@1|root,COG3181@2|Bacteria,1MU58@1224|Proteobacteria,2VHK8@28216|Betaproteobacteria,4731A@75682|Oxalobacteraceae
DescriptionTripartite tricarboxylate transporter family receptor
Cds size945
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185872.0575733-CDS-P-wetherbeei_contig10496:1020..19651683185872.0575733-CDS-P-wetherbeei_contig10496:1020..1965Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10496 1021..1965 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185872.0661082-UTR-P-wetherbeei_contig10496:1965..19921683185872.0661082-UTR-P-wetherbeei_contig10496:1965..1992Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig10496 1966..1992 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10496.2.1prot_P-wetherbeei_contig10496.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig10496 1021..1965 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig10496.2.1

>prot_P-wetherbeei_contig10496.2.1 ID=prot_P-wetherbeei_contig10496.2.1|Name=mRNA_P-wetherbeei_contig10496.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=315bp
MLLAHVLAFAMGTANAQSDKPVSIIVPFPPGGVVDVVGRLLADGMSSAMG
ARVIVENRPGAGGTIGATAVAKAAPDGRTLLLGGAATHVFSPLLYPNLAY
TPERSFAPVSQVSTGPLVLVLPSGSVVSTMGEFLALAKTQGDRLNYASNG
SGTYPHLAAELFRRAVGGKFVHVPYAGGSQAGVALASGEVGFSINHIPVV
LPFIKSGKVRAIATTGTKRSASFPDLPTFGESGLKGYEASPWFGVFAPAG
TPPAAIDKLSGVITKVVTSGTFRERLAAYGDEAVGGSPQELDALLRSELA
KWPTVVRDAEVKAN*
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mRNA from alignment at P-wetherbeei_contig10496:1021..1992-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig10496.2.1 ID=mRNA_P-wetherbeei_contig10496.2.1|Name=mRNA_P-wetherbeei_contig10496.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=972bp|location=Sequence derived from alignment at P-wetherbeei_contig10496:1021..1992- (Phaeothamnion wetherbeei SAG_119_79)
AAGCGCGGCGTTCAATTCTGCAAGGCGATGCTGTTGGCGCACGTGCTTGC GTTTGCGATGGGGACGGCCAACGCGCAGTCCGACAAGCCGGTAAGCATCA TCGTGCCGTTCCCCCCGGGCGGCGTCGTGGACGTCGTAGGCCGGCTGCTT GCCGACGGGATGTCGTCGGCAATGGGGGCGCGGGTCATCGTCGAGAATCG TCCCGGCGCAGGCGGCACGATCGGCGCGACAGCCGTTGCCAAGGCCGCTC CGGACGGGCGGACCTTGCTGTTGGGCGGGGCGGCCACGCACGTCTTCTCC CCCCTGCTTTACCCGAACCTCGCCTATACCCCGGAACGGAGCTTCGCGCC CGTCAGCCAGGTTTCGACCGGGCCCCTCGTCCTGGTCCTGCCCTCCGGGT CGGTCGTTTCCACAATGGGCGAATTCCTTGCGTTGGCGAAAACCCAGGGG GATCGCCTGAACTATGCGAGCAACGGATCCGGCACCTATCCGCACCTCGC GGCGGAACTGTTCCGGCGGGCCGTCGGGGGGAAGTTCGTCCATGTGCCTT ATGCCGGCGGCAGCCAGGCCGGAGTCGCACTGGCATCCGGGGAAGTGGGG TTTTCGATCAACCATATCCCCGTGGTGCTGCCTTTCATCAAATCCGGGAA GGTGCGGGCAATCGCGACGACGGGCACCAAGCGCTCCGCGAGTTTTCCCG ATCTGCCCACGTTCGGGGAATCAGGACTCAAGGGGTATGAAGCCAGCCCC TGGTTCGGCGTGTTCGCACCCGCCGGAACACCTCCCGCTGCCATCGACAA GCTCAGCGGCGTGATCACGAAAGTGGTCACGTCCGGCACATTTCGCGAGC GGCTGGCGGCGTATGGGGATGAAGCTGTCGGCGGATCCCCGCAGGAACTG GACGCCCTCCTGCGGTCGGAACTGGCGAAGTGGCCGACCGTCGTGCGCGA TGCCGAAGTCAAGGCGAACTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig10496:1021..1992-

>mRNA_P-wetherbeei_contig10496.2.1 ID=mRNA_P-wetherbeei_contig10496.2.1|Name=mRNA_P-wetherbeei_contig10496.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=945bp|location=Sequence derived from alignment at P-wetherbeei_contig10496:1021..1992- (Phaeothamnion wetherbeei SAG_119_79)
ATGCTGTTGGCGCACGTGCTTGCGTTTGCGATGGGGACGGCCAACGCGCA
GTCCGACAAGCCGGTAAGCATCATCGTGCCGTTCCCCCCGGGCGGCGTCG
TGGACGTCGTAGGCCGGCTGCTTGCCGACGGGATGTCGTCGGCAATGGGG
GCGCGGGTCATCGTCGAGAATCGTCCCGGCGCAGGCGGCACGATCGGCGC
GACAGCCGTTGCCAAGGCCGCTCCGGACGGGCGGACCTTGCTGTTGGGCG
GGGCGGCCACGCACGTCTTCTCCCCCCTGCTTTACCCGAACCTCGCCTAT
ACCCCGGAACGGAGCTTCGCGCCCGTCAGCCAGGTTTCGACCGGGCCCCT
CGTCCTGGTCCTGCCCTCCGGGTCGGTCGTTTCCACAATGGGCGAATTCC
TTGCGTTGGCGAAAACCCAGGGGGATCGCCTGAACTATGCGAGCAACGGA
TCCGGCACCTATCCGCACCTCGCGGCGGAACTGTTCCGGCGGGCCGTCGG
GGGGAAGTTCGTCCATGTGCCTTATGCCGGCGGCAGCCAGGCCGGAGTCG
CACTGGCATCCGGGGAAGTGGGGTTTTCGATCAACCATATCCCCGTGGTG
CTGCCTTTCATCAAATCCGGGAAGGTGCGGGCAATCGCGACGACGGGCAC
CAAGCGCTCCGCGAGTTTTCCCGATCTGCCCACGTTCGGGGAATCAGGAC
TCAAGGGGTATGAAGCCAGCCCCTGGTTCGGCGTGTTCGCACCCGCCGGA
ACACCTCCCGCTGCCATCGACAAGCTCAGCGGCGTGATCACGAAAGTGGT
CACGTCCGGCACATTTCGCGAGCGGCTGGCGGCGTATGGGGATGAAGCTG
TCGGCGGATCCCCGCAGGAACTGGACGCCCTCCTGCGGTCGGAACTGGCG
AAGTGGCCGACCGTCGTGCGCGATGCCGAAGTCAAGGCGAACTAG
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