mRNA_P-wetherbeei_contig1049.5.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1049.5.1 vs. uniprot
Match: A0A6H5K079_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K079_9PHAE) HSP 1 Score: 207 bits (528), Expect = 2.320e-52 Identity = 97/134 (72.39%), Postives = 107/134 (79.85%), Query Frame = 1 Query: 1801 GGWSLVRDRRGIQVWTSPVPDSPWYRIRARMRCEATPQQLLSLLIDDTRIGEYDRMFDRIRLVERVDDRTSVRWSSYRALWPTRPRDFVIKSTWEEFGDGTVVLATRSVERPDCPENPIFVRGRMVMCGYVISP 2202 G W VR RRGI +WTS V SP+ RIR RMRCEATP QLL LLIDD RI EYDRMFDR LVER +D TSVRW+ Y+A+WPTRPRDFVI+STWEEF DGT+V+ATRSVE D PE P FVRG+MV CGYVI P Sbjct: 419 GQWIPVRVRRGIHIWTSTVEGSPYCRIRGRMRCEATPAQLLQLLIDDERIMEYDRMFDRYELVERPNDHTSVRWTCYQAIWPTRPRDFVIRSTWEEFADGTIVIATRSVEHEDYPETPTFVRGKMVTCGYVICP 552
BLAST of mRNA_P-wetherbeei_contig1049.5.1 vs. uniprot
Match: D7FSJ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSJ0_ECTSI) HSP 1 Score: 207 bits (526), Expect = 3.020e-52 Identity = 96/134 (71.64%), Postives = 107/134 (79.85%), Query Frame = 1 Query: 1801 GGWSLVRDRRGIQVWTSPVPDSPWYRIRARMRCEATPQQLLSLLIDDTRIGEYDRMFDRIRLVERVDDRTSVRWSSYRALWPTRPRDFVIKSTWEEFGDGTVVLATRSVERPDCPENPIFVRGRMVMCGYVISP 2202 G W VR RRGI +WTS V SP+ RIR RMRCEATP QLL LLIDD RI EYDRMFDR +VER +D TSVRW+ Y+A+WPTRPRDFVI+STWEEF DGT+V+ATRSVE D PE P FVRG+MV CGYVI P Sbjct: 89 GQWIPVRVRRGIHIWTSTVEGSPYCRIRGRMRCEATPAQLLQLLIDDERIMEYDRMFDRYEMVERPNDHTSVRWTCYQAIWPTRPRDFVIRSTWEEFADGTIVIATRSVEHEDYPETPTFVRGKMVTCGYVICP 222
BLAST of mRNA_P-wetherbeei_contig1049.5.1 vs. uniprot
Match: A0A835YHQ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHQ7_9STRA) HSP 1 Score: 138 bits (347), Expect = 4.140e-30 Identity = 63/138 (45.65%), Postives = 87/138 (63.04%), Query Frame = 1 Query: 1795 PGGGWSLVRDRR--GIQVWTSPVPDSPWYRIRARMRCEATPQQLLSLLIDDTRIGEYDRMFDRIRLVERVDDRTSVRWSSYRALWPTRPRDFVIKSTWEEFGDGTVVLATRSVERPDCPENPIFVRGRMVMCGYVISP 2202 P W LVRD G+++W P S W IR R R A P +L LL+D+ RI EYD +FD I +V RVD R + + ++Y+ +WPT PRDF + S+W DG+ L RSV+ PDCPE FVRG+++MCG+++ P Sbjct: 569 PQADWRLVRDGGDDGVRLWKCAQPGSAWSMIRTRARLAAPPSAVLDLLLDEARIAEYDDLFDAIAVVARVDARAAFKRTAYKPIWPTAPRDFSLLSSWGTLDDGSAYLVNRSVDHPDCPEVKGFVRGQLMMCGFLMVP 706
BLAST of mRNA_P-wetherbeei_contig1049.5.1 vs. uniprot
Match: A0A6V1S8Y1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1S8Y1_HETAK) HSP 1 Score: 122 bits (306), Expect = 3.150e-26 Identity = 64/135 (47.41%), Postives = 86/135 (63.70%), Query Frame = 1 Query: 1807 WSLVR-DRRG-IQVWTSPVPDSPWYRIRARMRCEATPQQLLSLLIDDTRIGEYDRMFDRIRLVERVDDRTSVRWSSYRALWPTRPRDFVIKSTWEEFGDGTVVLATRSVERPDCPENPI-FVRGRMVMCGYVISP 2202 W+L D G I V V + W R EATP ++ SL+IDD RIGEYD MFD+I +E+VD R+S+R S Y+A+WPT RDFVI +TWE DG V++ATRSV+ P P +VR R++ GY+++P Sbjct: 209 WTLAHHDPDGDITVEVVLVEGTKWNCYRVSGMIEATPMEVASLVIDDNRIGEYDFMFDKIEFLEKVDARSSIRHSKYKAIWPTMARDFVINTTWEPLDDGRVLVATRSVDHPLVPAKVEGYVRARVLCAGYLMTP 343
BLAST of mRNA_P-wetherbeei_contig1049.5.1 vs. uniprot
Match: A0A4D9CPQ0_9STRA (START domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CPQ0_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 3.220e-13 Identity = 41/138 (29.71%), Postives = 73/138 (52.90%), Query Frame = 1 Query: 1804 GWSLVRDRRGIQVWTSPVPD-----SPWYRIRARMRCEATPQQLLSLLIDDTRIGEYDRMFDRIRLVERVDDRTSVRWSSYRALWPTRPRDFVIKSTWEEFGDGTVVLATRSVERPDCPENPIFVRGRMVMCGYVISP 2202 GW LV D +G+ V +P S + ++A A+P +L+L ++TR+ EY++ + R +E +++ T V W++ ++ +PRDF + + DGTVV+ R E P+ P +VR ++M +I P Sbjct: 352 GWELVSDAKGVTVHRKNLPSMDGRVSKYCCVKASGTLAASPDDILALFAENTRVPEYNKFYAEGRDLEAINEHTKVVWAASPPMFFFKPRDFCTVVHYRKLQDGTVVVVNRGAEHPEAPRTDKYVRAEILMGANIIQP 489
BLAST of mRNA_P-wetherbeei_contig1049.5.1 vs. uniprot
Match: A0A6G0WBN4_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WBN4_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 3.600e-13 Identity = 45/134 (33.58%), Postives = 71/134 (52.99%), Query Frame = 1 Query: 1807 WSLVRDRRGIQVWTSPVPDSPWYRIRARMRCEATPQQLLSLLIDDTRIGEYDRMFDRIRLVERVD--DRTSVRWSSYRALWPTRPRDFVIKSTWEEFGDGTVVLATRSVERPDCPENPIFVRGRMVMCGYVISP 2202 W+ V+ GI V+ V S W + A+ L +L D + +D M R+VE VD +TSVR++ + ++PT RDFV+ ++ + DGT+ +A+RS+E P PE FVR + GY++ P Sbjct: 519 WNEVKSSEGITVYRGVVEGSDWNAVMAKGVINCPAGFLAEILQDIAEMTTFDEMTASCRVVELVDLPTKTSVRYAQAKPVFPTLARDFVVITSEKRLEDGTIAIASRSIEHPTVPEAKGFVRAHTHISGYLVKP 652
BLAST of mRNA_P-wetherbeei_contig1049.5.1 vs. uniprot
Match: A0A485L016_9STRA (Aste57867_14200 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L016_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 3.650e-13 Identity = 44/134 (32.84%), Postives = 73/134 (54.48%), Query Frame = 1 Query: 1807 WSLVRDRRGIQVWTSPVPDSPWYRIRARMRCEATPQQLLSLLIDDTRIGEYDRMFDRIRLVERVD--DRTSVRWSSYRALWPTRPRDFVIKSTWEEFGDGTVVLATRSVERPDCPENPIFVRGRMVMCGYVISP 2202 W+ V+ GI V+ V S W ++A E + L +L D + + +D M R+VE VD +TSVR++ + ++PT RDFV+ ++ + DGT+ +A+RS++ P P F+R + GY+I P Sbjct: 282 WAAVKTVDGITVYRGLVHGSEWNAVKAIGTVECDAKTLAGILQDVSEMTTFDDMTASCRVVEHVDAATKTSVRYAQAKPVFPTTARDFVVITSEKRLEDGTIAIASRSIDHPSVPVTKHFIRAHTHVSGYLIRP 415
BLAST of mRNA_P-wetherbeei_contig1049.5.1 vs. uniprot
Match: A0A6U4ZLH7_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4ZLH7_HEMAN) HSP 1 Score: 72.0 bits (175), Expect = 2.800e-10 Identity = 40/146 (27.40%), Postives = 74/146 (50.68%), Query Frame = 1 Query: 1801 GGWSLVRDRRGIQVWTS-----------PVPD-SPWYRIRARMRCEATPQQLLSLLIDDTRIGEYDRMFDRIRLVERVDDRTSVRWSSYRALWPTRPRDFVIKSTWEEFGDGTVVLATRSVERPDCPENPIFVRGRMVMCGYVISP 2202 G W + + GI V + PV + S + ++A +A+P Q+ +L +D+TR+ EY+ +IR +E + T V WS+ + P + RDFV + + D T+++ R+ + P P+ ++R +V+ G V+ P Sbjct: 3 GAWEKICETDGINVMKTRLSSDTLIGGRPVGEASKFLCVKAEAVLDASPAQVYTLFVDNTRVREYNEFCKQIRDLEYKNSTTKVTWSASARIGPFKERDFVTRVHYRTLPDQTLLVVNRAEDHPAAPQTDRYLRMEIVLGGNVMKP 148
BLAST of mRNA_P-wetherbeei_contig1049.5.1 vs. uniprot
Match: A0A7C1USU6_9GAMM (START domain-containing protein n=1 Tax=Sedimenticola sp. TaxID=1940285 RepID=A0A7C1USU6_9GAMM) HSP 1 Score: 67.8 bits (164), Expect = 4.520e-9 Identity = 40/133 (30.08%), Postives = 67/133 (50.38%), Query Frame = 1 Query: 1804 GWSLVRDRRGIQVWTSPVPDSPWYRIRARMRCEATPQQLLSLLIDDTRIGEYDRMFDRIRLVERVDDRTSVRWSSYRALWPTRPRDFVIKSTWEEFGD-GTVVLATRSVERPDCPENPIFVRGRMVMCGYVIS 2199 GW+ V++R GI ++T PDSP + + EA+P+ ++ +L D+ E+ R +E VDDR + ++ + A WP RDFV + T G +V +S P PE VRG ++ + ++ Sbjct: 31 GWTEVKNRDGIGIFTKQSPDSPIVLAKGLVIIEASPEAIVEVLDDNGGHTEWIPYLLESRRLEAVDDRERLEYNLFDAPWPASDRDFVFRVTAHPGEQQGRIVFRMKSETSPLMPERDGIVRGVLLESTFRLT 163
BLAST of mRNA_P-wetherbeei_contig1049.5.1 vs. uniprot
Match: A0A0L0DJD6_THETB (START domain-containing protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DJD6_THETB) HSP 1 Score: 66.6 bits (161), Expect = 5.160e-8 Identity = 38/135 (28.15%), Postives = 68/135 (50.37%), Query Frame = 1 Query: 1804 GWSLVRDRRGIQVWTSPVPDSPWYRIRARMRCEATPQQLLSLLIDDTRIGEYDRMFDRIRLVERVDDRTSVRWSSYRALWP-TRPRDFVI--KSTWEEFGDGTVVLATRSVERPDCPENPIFVRGRMVMCGYVIS 2199 GW+ + ++ +++W +PD P + R +A+ Q + + + + EYD+M E+ D+ + +++SY + +P RDF++ W + GD VV T S+E PD P P FVRG + G + Sbjct: 39 GWTFKKMKQNVEIWVKDIPDCPLKFWKGRGVIKASAQYTFDYIREISNVPEYDKMAIDAYHTEQFMDQYAFQYNSYSSGFPGVSNRDFMLFASEVWMKSGDFAVV--TNSIEHPDFPPAPGFVRGVVKNSGLYVE 171 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1049.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1049.5.1 >prot_P-wetherbeei_contig1049.5.1 ID=prot_P-wetherbeei_contig1049.5.1|Name=mRNA_P-wetherbeei_contig1049.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=696bp MATTSYDLPQMPPLPPRSMGEGANSAIAGAHVASSGSQGRAVILSFLPAAback to top mRNA from alignment at P-wetherbeei_contig1049:4874..7495+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1049.5.1 ID=mRNA_P-wetherbeei_contig1049.5.1|Name=mRNA_P-wetherbeei_contig1049.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2622bp|location=Sequence derived from alignment at P-wetherbeei_contig1049:4874..7495+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1049:4874..7495+ >mRNA_P-wetherbeei_contig1049.5.1 ID=mRNA_P-wetherbeei_contig1049.5.1|Name=mRNA_P-wetherbeei_contig1049.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2088bp|location=Sequence derived from alignment at P-wetherbeei_contig1049:4874..7495+ (Phaeothamnion wetherbeei SAG_119_79)back to top |