mRNA_P-wetherbeei_contig1048.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1048.1.1
Unique NamemRNA_P-wetherbeei_contig1048.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig1048.1.1 vs. uniprot
Match: A0A835Z8B1_9STRA (DNA photolyase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8B1_9STRA)

HSP 1 Score: 330 bits (846), Expect = 2.640e-108
Identity = 148/187 (79.14%), Postives = 162/187 (86.63%), Query Frame = 1 
Query:    1 RMEGNPICRQIPWRDDPELLAAWEEGRTGYPFIDAIQTQLRTEGWIHHLARHASACFLTRGDLWQSWEAGAAVFDRLLLDADWSLNSANWMWLSCSAFFYQFFRVYSPVAFGKKTDPKGTYIRRYLPQLAKYPDKYIYEPWTAPLSVQRGAKCVIGRDYPAPVVDHKAVSKENMSRMKAAYDAYKSG 561
            RMEGNPICRQ+PW  + +LLAAWEE RTGYPFIDAI TQLRTEGWIHHLARHA ACFLTRGDLWQSWEAGA VFD+ LLDADWS+N+ANWMWLSCS+FFYQ+FR YSPVAFGKKTDP G YIR+YLPQL  YPDKYIYEPW AP +VQ  A CV+G DYP P+VDHK VSK+NM RMKAAY A  +G
Sbjct:  304 RMEGNPICRQVPWDSNAQLLAAWEESRTGYPFIDAIMTQLRTEGWIHHLARHAVACFLTRGDLWQSWEAGAVVFDKYLLDADWSVNTANWMWLSCSSFFYQYFRCYSPVAFGKKTDPTGAYIRKYLPQLKNYPDKYIYEPWLAPKAVQEKAGCVVGCDYPKPIVDHKQVSKDNMDRMKAAYAAQAAG 490
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BLAST of mRNA_P-wetherbeei_contig1048.1.1 vs. uniprot
Match: A0A7S0GN54_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0GN54_9EUKA)

HSP 1 Score: 307 bits (787), Expect = 6.130e-102
Identity = 135/185 (72.97%), Postives = 154/185 (83.24%), Query Frame = 1 
Query:    1 RMEGNPICRQIPWRDDPELLAAWEEGRTGYPFIDAIQTQLRTEGWIHHLARHASACFLTRGDLWQSWEAGAAVFDRLLLDADWSLNSANWMWLSCSAFFYQFFRVYSPVAFGKKTDPKGTYIRRYLPQLAKYPDKYIYEPWTAPLSVQRGAKCVIGRDYPAPVVDHKAVSKENMSRMKAAYDAYK 555
            +M+GNPICRQ+PW D+ + LAAWEE +TGYPFIDAI TQL+TEGWIHHLARH  ACFLTRGDLWQSWE GA VFDRLLLDADW++N+ NWMWLSCS FFYQ+FR YSPVAFGKKTD  G YIR+YLPQL KYP KYIYEPW AP  +Q+   CVIG+DYP P+V H  +SKENM+RM  AY  +K
Sbjct:   94 KMKGNPICRQVPWDDNKQYLAAWEEAKTGYPFIDAIMTQLKTEGWIHHLARHMVACFLTRGDLWQSWEKGARVFDRLLLDADWAINNGNWMWLSCSCFFYQYFRCYSPVAFGKKTDKNGDYIRKYLPQLNKYPAKYIYEPWKAPKGLQQKWGCVIGKDYPEPIVMHSTISKENMNRMAEAYKEHK 278
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BLAST of mRNA_P-wetherbeei_contig1048.1.1 vs. uniprot
Match: A0A7S0CGF6_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CGF6_9STRA)

HSP 1 Score: 303 bits (775), Expect = 1.880e-101
Identity = 134/186 (72.04%), Postives = 155/186 (83.33%), Query Frame = 1 
Query:    4 MEGNPICRQIPWRDDPELLAAWEEGRTGYPFIDAIQTQLRTEGWIHHLARHASACFLTRGDLWQSWEAGAAVFDRLLLDADWSLNSANWMWLSCSAFFYQFFRVYSPVAFGKKTDPKGTYIRRYLPQLAKYPDKYIYEPWTAPLSVQRGAKCVIGRDYPAPVVDHKAVSKENMSRMKAAYDAYKSG 561
            MEGNP+ RQIPW DDP+L+  W+ G+TGYP+IDAI TQL+TEGWIHHLARH+ ACFLTRGDLWQSWE GA VF+  LLDADWSLN+ NW WLSC+A FYQ+FR YSPVAFGKKTD  G YI++++P L K+P KYIYEPW APL VQR    +IG+DYPAPVVDHK+VSK NM RMK AYDA K+G
Sbjct:   20 MEGNPVARQIPWDDDPQLVQQWKNGKTGYPYIDAIMTQLKTEGWIHHLARHSVACFLTRGDLWQSWEKGAEVFEEELLDADWSLNNFNWQWLSCTAHFYQYFRCYSPVAFGKKTDKHGEYIKKWIPALRKFPTKYIYEPWMAPLEVQRTCGVMIGKDYPAPVVDHKSVSKANMGRMKEAYDAAKAG 205
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BLAST of mRNA_P-wetherbeei_contig1048.1.1 vs. uniprot
Match: UPI000C770CDB (cryptochrome-1-like n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C770CDB)

HSP 1 Score: 309 bits (791), Expect = 6.120e-101
Identity = 138/187 (73.80%), Postives = 158/187 (84.49%), Query Frame = 1 
Query:    1 RMEGNPICRQIPWRDDPELLAAWEEGRTGYPFIDAIQTQLRTEGWIHHLARHASACFLTRGDLWQSWEAGAAVFDRLLLDADWSLNSANWMWLSCSAFFYQFFRVYSPVAFGKKTDPKGTYIRRYLPQLAKYPDKYIYEPWTAPLSVQRGAKCVIGRDYPAPVVDHKAVSKENMSRMKAAYDAYKSG 561
            +MEGN IC+QI W  +PE +AAW E RTG+P+IDAI TQLRTEGWIHHLARH+ ACFLTRGDL+QSWE G  VF+ LLLDADWSLN+ NWMWLS S+FFYQFFRVYSPVAFGKKTDP G YIR+YLPQL KYPDKYIY PW APL+VQ+ A C+IG+DYP P+VDH  +SK N+ RMK AYDA K+G
Sbjct:  240 KMEGNQICKQIDWDSNPEKVAAWAEARTGFPWIDAIMTQLRTEGWIHHLARHSVACFLTRGDLYQSWERGQEVFEELLLDADWSLNAGNWMWLSASSFFYQFFRVYSPVAFGKKTDPTGEYIRKYLPQLKKYPDKYIYSPWEAPLAVQKAAGCIIGQDYPRPIVDHTVISKINIGRMKKAYDAGKAG 426
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BLAST of mRNA_P-wetherbeei_contig1048.1.1 vs. uniprot
Match: A0A6S9LDJ6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9LDJ6_HETAK)

HSP 1 Score: 305 bits (781), Expect = 1.490e-100
Identity = 140/197 (71.07%), Postives = 157/197 (79.70%), Query Frame = 1 
Query:    1 RMEGNPICRQIPWRDDPEL---LAAWEEGRTGYPFIDAIQTQLRTEGWIHHLARHASACFLTRGDLWQSWEAGAAVFDRLLLDADWSLNSANWMWLSCSAFFYQFFRVYSPVAFGKKTDPKGTYIRRYLPQLAKYPDKYIYEPWTAPLSVQRGAKCVIGRDYPAPVVDHKAVSKENMSRMKAAYDAYKSGAVAGSSS 582
            +MEGNPIC+Q+PW + PE    LAAW   RTGYP+IDA  TQLR EGW+HHLARHA ACFLTRGDLW SWE GAAVFDRLLLDADWSLNSANWMWLSCS+FFYQ+FR YSPVAFGKKTDP G YI++YLPQL  +P KYIYEPW AP S+Q    CVIG DYP P+VDH  +SKENM++MK AY      A  GS+S
Sbjct:   88 KMEGNPICKQVPWAEGPEAEARLAAWAGARTGYPWIDAAMTQLRQEGWLHHLARHAVACFLTRGDLWVSWERGAAVFDRLLLDADWSLNSANWMWLSCSSFFYQYFRCYSPVAFGKKTDPDGEYIKKYLPQLRNFPKKYIYEPWLAPKSMQESCGCVIGVDYPEPIVDHSIISKENMAKMKQAYANQPGSAEGGSAS 284
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BLAST of mRNA_P-wetherbeei_contig1048.1.1 vs. uniprot
Match: F2U6L6_SALR5 (DNA photolyase n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U6L6_SALR5)

HSP 1 Score: 304 bits (779), Expect = 4.790e-98
Identity = 137/185 (74.05%), Postives = 152/185 (82.16%), Query Frame = 1 
Query:    1 RMEGNPICRQIPWRDDPELLAAWEEGRTGYPFIDAIQTQLRTEGWIHHLARHASACFLTRGDLWQSWEAGAAVFDRLLLDADWSLNSANWMWLSCSAFFYQFFRVYSPVAFGKKTDPKGTYIRRYLPQLAKYPDKYIYEPWTAPLSVQRGAKCVIGRDYPAPVVDHKAVSKENMSRMKAAYDAYK 555
            RMEGN ICRQI W  +  LLAAWE  RTGYP+IDA  TQLR EGW+HHLARHA ACFLTRGDL+QSWE GA VFDRLL+DADW LNSANWMWLSCS+FFYQ+FRVYSPVAFGKKTDP G YIR+YLPQL  +PDKYIYEPW AP  VQR   C+IG+DYP P+VDH  VS  N +R++A YDA K
Sbjct:  315 RMEGNRICRQIDWDTNDALLAAWENARTGYPWIDACMTQLRREGWLHHLARHAVACFLTRGDLYQSWEKGAQVFDRLLVDADWHLNSANWMWLSCSSFFYQYFRVYSPVAFGKKTDPSGAYIRKYLPQLKAFPDKYIYEPWKAPPGVQRSCGCIIGKDYPEPIVDHAEVSAANKARIRACYDALK 499
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BLAST of mRNA_P-wetherbeei_contig1048.1.1 vs. uniprot
Match: UPI001885A408 (LOW QUALITY PROTEIN: cryptochrome-2-like n=1 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI001885A408)

HSP 1 Score: 303 bits (776), Expect = 1.590e-97
Identity = 139/181 (76.80%), Postives = 151/181 (83.43%), Query Frame = 1 
Query:    1 RMEGNPICRQIPWRDDPELLAAWEEGRTGYPFIDAIQTQLRTEGWIHHLARHASACFLTRGDLWQSWEAGAAVFDRLLLDADWSLNSANWMWLSCSAFFYQFFRVYSPVAFGKKTDPKGTYIRRYLPQLAKYPDKYIYEPWTAPLSVQRGAKCVIGRDYPAPVVDHKAVSKENMSRMKAAY 543
            RMEGNPICRQIPW+ + E L AW EGRTGYPFIDAI TQLR EGWIHHLARHA ACFLTRGDL+ SWE G  VFD LLLD+DWSLN+ANWMWLS SAFF+QFFRVYSPVAFGKKTDP G YI++YLP+L KYP +YIYEPW APLSVQR A CVIG DYPAP+VDH  V   N+  M AAY
Sbjct:  306 RMEGNPICRQIPWQKNEEHLKAWTEGRTGYPFIDAIMTQLRQEGWIHHLARHAVACFLTRGDLFISWEEGMKVFDELLLDSDWSLNAANWMWLSASAFFHQFFRVYSPVAFGKKTDPNGDYIKKYLPKLKKYPSQYIYEPWKAPLSVQRAAGCVIGTDYPAPIVDHDTVRPRNIEWMAAAY 486
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BLAST of mRNA_P-wetherbeei_contig1048.1.1 vs. uniprot
Match: D7FPP0_ECTSI (Cryptochrome 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPP0_ECTSI)

HSP 1 Score: 302 bits (774), Expect = 2.850e-97
Identity = 136/197 (69.04%), Postives = 156/197 (79.19%), Query Frame = 1 
Query:    1 RMEGNPICRQIPWRDDPELLAAWEEGRTGYPFIDAIQTQLRTEGWIHHLARHASACFLTRGDLWQSWEAGAAVFDRLLLDADWSLNSANWMWLSCSAFFYQFFRVYSPVAFGKKTDPKGTYIRRYLPQLAKYPDKYIYEPWTAPLSVQRGAKCVIGRDYPAPVVDHKAVSKENMSRMKAAYDAYKSGAVAGSSSGGG 591
            +M GNP+ RQIPW  D E L AW+E RTG+P+IDA  TQL+ EGWIHHLARHA ACFLTRGDLWQSWE GAAVFD LLLDADWS+N+ NW WLSCSAFFYQ+FR YSP+AFGKKTD  G YI++YLP L K+P KYIYEPWTAPL VQRG  C+IG+DYP P+VDH   SK NM++M  AYDA++    A S   GG
Sbjct:  313 KMVGNPVIRQIPWDKDEEKLMAWKEARTGFPWIDAAMTQLKDEGWIHHLARHAVACFLTRGDLWQSWEDGAAVFDELLLDADWSINNFNWQWLSCSAFFYQYFRCYSPIAFGKKTDQNGDYIKKYLPALRKFPSKYIYEPWTAPLQVQRGCGCIIGKDYPKPIVDHADTSKANMAKMNDAYDAHQEAQAAESHDDGG 509
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BLAST of mRNA_P-wetherbeei_contig1048.1.1 vs. uniprot
Match: E1ZS30_CHLVA (Photolyase/cryptochrome alpha/beta domain-containing protein (Fragment) n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZS30_CHLVA)

HSP 1 Score: 300 bits (769), Expect = 3.870e-97
Identity = 134/185 (72.43%), Postives = 154/185 (83.24%), Query Frame = 1 
Query:    1 RMEGNPICRQIPWRDDPELLAAWEEGRTGYPFIDAIQTQLRTEGWIHHLARHASACFLTRGDLWQSWEAGAAVFDRLLLDADWSLNSANWMWLSCSAFFYQFFRVYSPVAFGKKTDPKGTYIRRYLPQLAKYPDKYIYEPWTAPLSVQRGAKCVIGRDYPAPVVDHKAVSKENMSRMKAAYDAYK 555
            RM GNPIC+QIPW DDPE +AAWE  RTGYP+IDAI  QLR +GW+HHLARH+ ACFLTRGDLW SWEAG AVFD+ L+DADWSLN+ANW WLS SAFF Q+FRVYSP+AFGK+ D  G YIRR+LP L   P +YIYEPWTAPLSVQ+ A CV+G+DYP P+VDH+A  KENM+RMKAAY A K
Sbjct:  307 RMAGNPICKQIPWVDDPERIAAWEHSRTGYPWIDAIMAQLRQQGWMHHLARHSVACFLTRGDLWCSWEAGQAVFDKYLIDADWSLNAANWQWLSASAFFSQYFRVYSPIAFGKQYDKNGDYIRRFLPVLKDMPVRYIYEPWTAPLSVQQAAGCVVGKDYPRPIVDHQAAMKENMARMKAAYGASK 491
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BLAST of mRNA_P-wetherbeei_contig1048.1.1 vs. uniprot
Match: UPI000D73335D (cryptochrome-1-like isoform X2 n=1 Tax=Pomacea canaliculata TaxID=400727 RepID=UPI000D73335D)

HSP 1 Score: 298 bits (764), Expect = 6.100e-97
Identity = 133/187 (71.12%), Postives = 151/187 (80.75%), Query Frame = 1 
Query:    1 RMEGNPICRQIPWRDDPELLAAWEEGRTGYPFIDAIQTQLRTEGWIHHLARHASACFLTRGDLWQSWEAGAAVFDRLLLDADWSLNSANWMWLSCSAFFYQFFRVYSPVAFGKKTDPKGTYIRRYLPQLAKYPDKYIYEPWTAPLSVQRGAKCVIGRDYPAPVVDHKAVSKENMSRMKAAYDAYKSG 561
            RMEGNP+C Q+PW  +PE LAAW E RTGYPFIDAI TQLRTEGWIHHLARHA ACFLTRGDLW SWE G  VF+ LLLDADW LN+ NW+WLS SAFF+Q+FRVYSPVAFGKKTD  G YI++Y+P+L K+P +YIYEPW AP SVQ  A C+IG+DYP PVVDH  +SK N+ RM AAY   K G
Sbjct:  231 RMEGNPVCTQVPWDSNPEYLAAWSEARTGYPFIDAIMTQLRTEGWIHHLARHAVACFLTRGDLWLSWEEGQKVFEELLLDADWYLNAGNWLWLSASAFFHQYFRVYSPVAFGKKTDKNGDYIKKYVPKLRKFPAQYIYEPWKAPKSVQAAAGCIIGQDYPKPVVDHDTISKVNIKRMAAAYAKRKEG 417
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1048.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z8B1_9STRA2.640e-10879.14DNA photolyase n=1 Tax=Tribonema minus TaxID=30337... [more]
A0A7S0GN54_9EUKA6.130e-10272.97Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A7S0CGF6_9STRA1.880e-10172.04Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
UPI000C770CDB6.120e-10173.80cryptochrome-1-like n=1 Tax=Eurytemora affinis Tax... [more]
A0A6S9LDJ6_HETAK1.490e-10071.07Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
F2U6L6_SALR54.790e-9874.05DNA photolyase n=1 Tax=Salpingoeca rosetta (strain... [more]
UPI001885A4081.590e-9776.80LOW QUALITY PROTEIN: cryptochrome-2-like n=1 Tax=P... [more]
D7FPP0_ECTSI2.850e-9769.04Cryptochrome 1 n=1 Tax=Ectocarpus siliculosus TaxI... [more]
E1ZS30_CHLVA3.870e-9772.43Photolyase/cryptochrome alpha/beta domain-containi... [more]
UPI000D73335D6.100e-9771.12cryptochrome-1-like isoform X2 n=1 Tax=Pomacea can... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1048contigP-wetherbeei_contig1048:72..2386 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog227086.JGI_V11_58130
Preferred nameCRY2
PFAMsDNA_photolyase,FAD_binding_7
Model size678
Max annot lvl2759|Eukaryota
KEGG koko:K02295,ko:K10426
KEGG Pathwayko04710,ko04962,ko05016,map04710,map04962,map05016
Hectar predicted targeting categoryother localisation
GOsGO:0000060,GO:0000122,GO:0000166,GO:0000976,GO:0000977,GO:0000978,GO:0000987,GO:0000988,GO:0000989,GO:0001012,GO:0001067,GO:0001750,GO:0003008,GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003697,GO:0003824,GO:0003904,GO:0003913,GO:0003914,GO:0004888,GO:0004930,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005641,GO:0005654,GO:0005737,GO:0005739,GO:0005829,GO:0005886,GO:0005929,GO:0005975,GO:0005996,GO:0006006,GO:0006094,GO:0006355,GO:0006357,GO:0006464,GO:0006468,GO:0006606,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006950,GO:0006974,GO:0006975,GO:0007154,GO:0007165,GO:0007186,GO:0007600,GO:0007602,GO:0007610,GO:0007622,GO:0007623,GO:0007626,GO:0008020,GO:0008104,GO:0008134,GO:0008150,GO:0008152,GO:0008277,GO:0009058,GO:0009314,GO:0009411,GO:0009416,GO:0009581,GO:0009582,GO:0009583,GO:0009584,GO:0009588,GO:0009605,GO:0009628,GO:0009629,GO:0009637,GO:0009648,GO:0009649,GO:0009719,GO:0009725,GO:0009785,GO:0009881,GO:0009882,GO:0009889,GO:0009890,GO:0009892,GO:0009966,GO:0009968,GO:0009987,GO:0010033,GO:0010243,GO:0010468,GO:0010556,GO:0010558,GO:0010563,GO:0010605,GO:0010629,GO:0010646,GO:0010648,GO:0010817,GO:0010876,GO:0010921,GO:0010923,GO:0010966,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016051,GO:0016310,GO:0016604,GO:0016607,GO:0016829,GO:0016830,GO:0017038,GO:0019219,GO:0019220,GO:0019222,GO:0019318,GO:0019319,GO:0019538,GO:0019899,GO:0019900,GO:0019901,GO:0019902,GO:0019915,GO:0023051,GO:0023052,GO:0023057,GO:0030522,GO:0031090,GO:0031253,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031396,GO:0031397,GO:0031399,GO:0031400,GO:0031967,GO:0031970,GO:0031974,GO:0031975,GO:0031981,GO:0032268,GO:0032269,GO:0032368,GO:0032369,GO:0032501,GO:0032515,GO:0032868,GO:0032879,GO:0032922,GO:0032991,GO:0033036,GO:0033143,GO:0033144,GO:0033365,GO:0033500,GO:0033554,GO:0033762,GO:0034504,GO:0034613,GO:0035257,GO:0035303,GO:0035304,GO:0035305,GO:0035308,GO:0036094,GO:0036211,GO:0038023,GO:0040011,GO:0042221,GO:0042330,GO:0042332,GO:0042592,GO:0042593,GO:0042622,GO:0042749,GO:0042752,GO:0042754,GO:0042826,GO:0042886,GO:0042995,GO:0043005,GO:0043086,GO:0043153,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043269,GO:0043412,GO:0043434,GO:0043565,GO:0043666,GO:0044057,GO:0044060,GO:0044070,GO:0044092,GO:0044212,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044441,GO:0044444,GO:0044446,GO:0044451,GO:0044459,GO:0044463,GO:0044464,GO:0045184,GO:0045187,GO:0045475,GO:0045744,GO:0045892,GO:0045934,GO:0045936,GO:0046364,GO:0046883,GO:0046888,GO:0046907,GO:0048037,GO:0048511,GO:0048512,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0048878,GO:0050660,GO:0050662,GO:0050789,GO:0050790,GO:0050794,GO:0050795,GO:0050877,GO:0050896,GO:0050906,GO:0050953,GO:0050958,GO:0050962,GO:0050980,GO:0051046,GO:0051048,GO:0051049,GO:0051051,GO:0051169,GO:0051170,GO:0051171,GO:0051172,GO:0051174,GO:0051179,GO:0051234,GO:0051235,GO:0051239,GO:0051241,GO:0051246,GO:0051248,GO:0051252,GO:0051253,GO:0051336,GO:0051346,GO:0051427,GO:0051606,GO:0051641,GO:0051649,GO:0051716,GO:0051726,GO:0060089,GO:0060170,GO:0060255,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070727,GO:0070888,GO:0071000,GO:0071214,GO:0071478,GO:0071482,GO:0071483,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:0071949,GO:0072594,GO:0080090,GO:0080134,GO:0080135,GO:0097159,GO:0097381,GO:0097458,GO:0097730,GO:0097731,GO:0097733,GO:0098588,GO:0098590,GO:0104004,GO:0120025,GO:0120038,GO:0140097,GO:0140110,GO:1901265,GO:1901363,GO:1901564,GO:1901576,GO:1901652,GO:1901698,GO:1901700,GO:1901976,GO:1902679,GO:1903320,GO:1903321,GO:1903506,GO:1903507,GO:1903530,GO:1903531,GO:1905952,GO:1905953,GO:1990837,GO:2000001,GO:2000112,GO:2000113,GO:2000118,GO:2000322,GO:2000323,GO:2000831,GO:2000832,GO:2000846,GO:2000847,GO:2000849,GO:2000850,GO:2001020,GO:2001141
Exons7
Evalue3.96e-103
EggNOG OGsCOG0415@1|root,KOG0133@2759|Eukaryota
DescriptionDNA photolyase activity
Cds size675
COG categoryL
BRITEko00000,ko00001,ko03036,ko03400,ko04812
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1048.1.1prot_P-wetherbeei_contig1048.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1048 75..2386 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185871.190729-UTR-P-wetherbeei_contig1048:71..741683185871.190729-UTR-P-wetherbeei_contig1048:71..74Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1048 72..74 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185871.201611-CDS-P-wetherbeei_contig1048:74..1471683185871.201611-CDS-P-wetherbeei_contig1048:74..147Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1048 75..147 +
1683185871.210523-CDS-P-wetherbeei_contig1048:349..3951683185871.210523-CDS-P-wetherbeei_contig1048:349..395Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1048 350..395 +
1683185871.2191803-CDS-P-wetherbeei_contig1048:556..7001683185871.2191803-CDS-P-wetherbeei_contig1048:556..700Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1048 557..700 +
1683185871.2277372-CDS-P-wetherbeei_contig1048:1164..12181683185871.2277372-CDS-P-wetherbeei_contig1048:1164..1218Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1048 1165..1218 +
1683185871.2389097-CDS-P-wetherbeei_contig1048:1556..16411683185871.2389097-CDS-P-wetherbeei_contig1048:1556..1641Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1048 1557..1641 +
1683185871.2476695-CDS-P-wetherbeei_contig1048:1935..20431683185871.2476695-CDS-P-wetherbeei_contig1048:1935..2043Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1048 1936..2043 +
1683185871.263531-CDS-P-wetherbeei_contig1048:2221..23861683185871.263531-CDS-P-wetherbeei_contig1048:2221..2386Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1048 2222..2386 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1048.1.1

>prot_P-wetherbeei_contig1048.1.1 ID=prot_P-wetherbeei_contig1048.1.1|Name=mRNA_P-wetherbeei_contig1048.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=225bp
MEGNPICRQIPWRDDPELLAAWEEGRTGYPFIDAIQTQLRTEGWIHHLAR
HASACFLTRGDLWQSWEAGAAVFDRLLLDADWSLNSANWMWLSCSAFFYQ
FFRVYSPVAFGKKTDPKGTYIRRYLPQLAKYPDKYIYEPWTAPLSVQRGA
KCVIGRDYPAPVVDHKAVSKENMSRMKAAYDAYKSGAVAGSSSGGGRVET
GEGSSKVRGVESGGKRLGSEGGGPS
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mRNA from alignment at P-wetherbeei_contig1048:72..2386+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1048.1.1 ID=mRNA_P-wetherbeei_contig1048.1.1|Name=mRNA_P-wetherbeei_contig1048.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2315bp|location=Sequence derived from alignment at P-wetherbeei_contig1048:72..2386+ (Phaeothamnion wetherbeei SAG_119_79)
AGGATGGAAGGGAATCCGATCTGCAGGCAGATCCCGTGGCGGGACGACCC
CGAGCTGCTGGCCGCGTGGGAAGAAGGTGAGAATGTTCCCCCAAGTGTTC
TTTCTGTATTTTCTCAAGTTAGGAGCTCCTGCTGTTGTCCGCGACTCCTT
CGGTGCTCTCCTTCTGACCTTACTTGTCCCCACCCGCCAGCCCTTCAACC
CCCCTTTCCCTCCCTACAATGTTACTTGCTCTGCAACGGCCGAAACCGTC
GCCGCCGCCGCCATTGTTATTCTCTCAGGACGCACGGGGTACCCCTTCAT
CGACGCCATTCAGACGCAGCTGAGGTAACTTTCCGCCAGAAGGGCGGTTG
CTTCTCTTCTTTTCTTTCTTTCAGTCGCGGAACAATGTTATCAGTGTGCA
CGAGGCGTTTCTGCCAGCGGCAGGCGGCCTCCTCACATAAGTCTCCGCTT
TGATGCCTGAACGTTTTTTTCCGAATTGGTGGCAGGACGGAGGGATGGAT
CCACCACCTCGCGCGGCACGCGTCGGCATGCTTCCTGACTCGCGGCGACC
TGTGGCAGTCGTGGGAGGCGGGCGCTGCCGTCTTCGACCGCCTTCTTCTC
GACGCTGACTGGTCGCTCAACTCAGCCAAGTGAGCACAGCTTGTACCTTT
GTGCCTTTTCCCTTTACGTTGTCTATTTTGCTGTGTGACGGTTTGGCATA
CAGATTGTAAGAGCGGCTTGTTTTTTTGAGTGCCCGCATTTGATTTTGTG
CGGGTTTCTCTGCTGCTTCCGGCTGAATGTATGTTTGCGGCATAGTTGCA
CGGCAGCTGAACAGTTGATTGTGCCAGGAAGAGGCGAAGAAACATATAGC
GAATAGAACAGTTAGTTATTTGGGCCTTACGTTTTGTAGACGGCACGTTC
TCTGGCTGCTCTGTCGCTGCGGGGCGTTGCGAGGAGAACAACTGTGAATG
GAAATGGTATTTGACGTGCCATTCCTTCCTTTGTTCGAATTCTCTTTCCC
TTCTGAATCGAACTGGCTGACGCTTCAAAACTCACTCCCACTTCCCTCTC
TTCTCCTCGCTGGCTGTGCATTGGGTGCGAAACGATAACACAGCTGGATG
TGGCTGTCGTGCAGCGCCTTCTTCTACCAGTTCTTCCGCGTCTACTCGTG
TGTTTACCCGCGTTTACTTTCGCAGTTGCATTAATTGGGCAGGCATCTGA
GTGAAGGTTTCGGCGATTAGGCAACTTTTGAAGTCTGCTTGCCGAAGTCT
TGGTTTCGGTGTTAATGATTGGGTAAGCAAAAGGCACGCCCCGCCGCTGG
TGGCTTTCCGCTCCCTTTTTTGTGTCCGATTGTTGACTCCTTGTGCTTAC
TTCCCGCCCTTTCCTCCGTAGTTACGGCTTCCACCCCCATATGTATTTCC
GTTTCGTCCCCGCCTTCTCTTCCCCTTCTCCCCTCCCTACTCACTACCTA
CCTACCTACTGTACCCGGGTGCTCTCTCATGCCAGGCCGGTGGCCTTCGG
CAAGAAGACGGACCCCAAGGGAACCTACATCCGCCGCTACCTCCCGCAGC
TCGCCAAGTATCCCGACAAGGTACGTTCGGCTCTCCCGCTCATAAGCTCT
AGGGGATGTCCTCTCTTAGTGTCCTGAAATTGGAGCGTGAGTAACGGCAT
CACTTTGAAGCCAGCAGCTTCATAAGAAAACGAGGGGTTTGGAAATGGTG
CGAAGGTTGCTATGGAGAGGGAGGGCCGTTGCTGGTTGTCTAGTCTGCGT
ATAGATTGGATTGATGTTGCCTTTTCAGGCGTCGGCTTGCCCGATGCTGC
TTGGACCTCCTTTCCACACCTCACTTCTGGCCCACTTTTCTCCATATCCA
CACCCCAATTTCAGTACATTTACGAGCCCTGGACGGCACCGCTGTCGGTG
CAGCGAGGGGCGAAGTGCGTCATCGGGAGGGACTATCCCGCGCCCGTTGT
CGACCATAAGGCGGTCTCCAAGGTACGTGGCCAGGTATCCCATGCACCAT
TCATCTCTCATTGCCTTCGCCTTTCTGATTGACGTGTTCGACTCTTTGCT
ACCTTCAAGTTTGTTCAGTCTGCCTCTTTCGGAGCGAGAACCGTGCATGA
CTCGATCGCTAGAGCTGCCAATCTTCCGGTGAAAACACGCCAAAACACAG
GAGAACATGTCGCGCATGAAAGCGGCCTACGATGCGTACAAGTCCGGCGC
CGTGGCCGGTAGCAGCAGTGGCGGCGGCCGGGTCGAGACCGGCGAGGGGA
GTAGCAAAGTACGCGGCGTTGAAAGCGGCGGGAAGCGGTTGGGGAGCGAA
GGTGGCGGTCCGAGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1048:72..2386+

>mRNA_P-wetherbeei_contig1048.1.1 ID=mRNA_P-wetherbeei_contig1048.1.1|Name=mRNA_P-wetherbeei_contig1048.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=675bp|location=Sequence derived from alignment at P-wetherbeei_contig1048:72..2386+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGAAGGGAATCCGATCTGCAGGCAGATCCCGTGGCGGGACGACCCCGA
GCTGCTGGCCGCGTGGGAAGAAGGACGCACGGGGTACCCCTTCATCGACG
CCATTCAGACGCAGCTGAGGACGGAGGGATGGATCCACCACCTCGCGCGG
CACGCGTCGGCATGCTTCCTGACTCGCGGCGACCTGTGGCAGTCGTGGGA
GGCGGGCGCTGCCGTCTTCGACCGCCTTCTTCTCGACGCTGACTGGTCGC
TCAACTCAGCCAACTGGATGTGGCTGTCGTGCAGCGCCTTCTTCTACCAG
TTCTTCCGCGTCTACTCGCCGGTGGCCTTCGGCAAGAAGACGGACCCCAA
GGGAACCTACATCCGCCGCTACCTCCCGCAGCTCGCCAAGTATCCCGACA
AGTACATTTACGAGCCCTGGACGGCACCGCTGTCGGTGCAGCGAGGGGCG
AAGTGCGTCATCGGGAGGGACTATCCCGCGCCCGTTGTCGACCATAAGGC
GGTCTCCAAGGAGAACATGTCGCGCATGAAAGCGGCCTACGATGCGTACA
AGTCCGGCGCCGTGGCCGGTAGCAGCAGTGGCGGCGGCCGGGTCGAGACC
GGCGAGGGGAGTAGCAAAGTACGCGGCGTTGAAAGCGGCGGGAAGCGGTT
GGGGAGCGAAGGTGGCGGTCCGAGC
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