mRNA_P-wetherbeei_contig10470.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig10470.2.1 vs. uniprot
Match: A0A146HFR8_MYCCL (Polyprotein (Fragment) n=1 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146HFR8_MYCCL) HSP 1 Score: 99.8 bits (247), Expect = 7.880e-23 Identity = 51/92 (55.43%), Postives = 60/92 (65.22%), Query Frame = 1 Query: 4 LWLRRLARGLGLGVTAPTPIHEDNQRCSDIATNLFSERRVKHIDIKFHIVRERVESGEVVLVPTQRKDQLADLLTKPLPGPRTRFLREQILG 279 +WLR+LA LG+ V APTPIH DNQ A N R KHID++ H VRERV S EV LV +D LAD+LTKPLP P+ LR+Q LG Sbjct: 286 IWLRQLASELGISVEAPTPIHIDNQSAIKFAENPMFHARSKHIDMRHHFVRERVASNEVKLVHCASEDNLADILTKPLPRPQFVALRDQFLG 377
BLAST of mRNA_P-wetherbeei_contig10470.2.1 vs. uniprot
Match: A0A3S3PWI2_9ACAR (RxLR effector candidate protein-like protein (Fragment) n=1 Tax=Dinothrombium tinctorium TaxID=1965070 RepID=A0A3S3PWI2_9ACAR) HSP 1 Score: 93.2 bits (230), Expect = 3.600e-20 Identity = 45/91 (49.45%), Postives = 60/91 (65.93%), Query Frame = 1 Query: 1 ALWLRRLARGLGLGVTAPTPIHEDNQRCSDIATNLFSERRVKHIDIKFHIVRERVESGEVVLVPTQRKDQLADLLTKPLPGPRTRFLREQI 273 ++WLR L + LG TAPT ++EDNQ C I N R KHIDIK+H VRE+VESGEV + K LAD++TK +PGP+ LR+++ Sbjct: 118 SIWLRALLKELGYDQTAPTVLYEDNQSCIAITKNPKLHSRTKHIDIKYHFVREKVESGEVRFEYCESKCMLADIMTKAIPGPQFEVLRDKL 208
BLAST of mRNA_P-wetherbeei_contig10470.2.1 vs. uniprot
Match: W7SYU7_9STRA (Putative polyprotein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7SYU7_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 1.870e-18 Identity = 42/93 (45.16%), Postives = 59/93 (63.44%), Query Frame = 1 Query: 1 ALWLRRLARGLGLGVTAPTPIHEDNQRCSDIATNLFSERRVKHIDIKFHIVRERVESGEVVLVPTQRKDQLADLLTKPLPGPRTRFLREQILG 279 A+++R+L LG PT I EDNQ C + N + +R KHID+++H VRE+VES EV LV + QLAD+LTKPL R +R +++G Sbjct: 42 AVYIRQLLTDLGFKQDEPTVIMEDNQACIAMGNNPITHKRTKHIDVRYHFVREKVESKEVELVYIPTQHQLADILTKPLSNIRLAMIRNRMMG 134
BLAST of mRNA_P-wetherbeei_contig10470.2.1 vs. uniprot
Match: W7U3E4_9STRA (Copia-type polyprotein (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U3E4_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 2.070e-18 Identity = 42/93 (45.16%), Postives = 59/93 (63.44%), Query Frame = 1 Query: 1 ALWLRRLARGLGLGVTAPTPIHEDNQRCSDIATNLFSERRVKHIDIKFHIVRERVESGEVVLVPTQRKDQLADLLTKPLPGPRTRFLREQILG 279 A+++R+L LG PT I EDNQ C ++ N + +R KHIDI++H VRE+ ES EV LV + QLAD+LTKPL R +R +++G Sbjct: 117 AVYIRQLLTDLGFKQDEPTVIMEDNQACIAMSNNPITHKRTKHIDIRYHFVREKAESKEVELVYIPTQHQLADILTKPLSNIRLAMIRNRMMG 209
BLAST of mRNA_P-wetherbeei_contig10470.2.1 vs. uniprot
Match: A0A182G3D4_AEDAL (Uncharacterized protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182G3D4_AEDAL) HSP 1 Score: 83.2 bits (204), Expect = 1.150e-17 Identity = 40/91 (43.96%), Postives = 58/91 (63.74%), Query Frame = 1 Query: 1 ALWLRRLARGLGLGVTAPTPIHEDNQRCSDIATNLFSERRVKHIDIKFHIVRERVESGEVVLVPTQRKDQLADLLTKPLPGPRTRFLREQI 273 A+WLR L R LG V PT IHEDNQ C +A + RR+KH+D++FH V+ +++G V L+ +DQ+AD++TK LP + LR + Sbjct: 118 AIWLRGLLRDLGQRVADPTIIHEDNQACIRVAESDKPTRRMKHVDVRFHFVKNEIDAGTVRLLYVPSEDQVADVMTKGLPRIQFEKLRNML 208
BLAST of mRNA_P-wetherbeei_contig10470.2.1 vs. uniprot
Match: W7TF74_9STRA (Gag-pol polyprotein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TF74_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 1.490e-17 Identity = 42/93 (45.16%), Postives = 59/93 (63.44%), Query Frame = 1 Query: 1 ALWLRRLARGLGLGVTAPTPIHEDNQRCSDIATNLFSERRVKHIDIKFHIVRERVESGEVVLVPTQRKDQLADLLTKPLPGPRTRFLREQILG 279 A+++R+L LG PT I EDNQ C ++ N + +R KHID++FH VR +VES EV LV + QLAD+LTKPL R +R +++G Sbjct: 213 AVYIRQLLMDLGFKQDKPTVIMEDNQACIAMSNNPITHKRTKHIDVRFHFVRGKVESKEVELVYIPTQHQLADILTKPLSSIRLAMIRNRMMG 305
BLAST of mRNA_P-wetherbeei_contig10470.2.1 vs. uniprot
Match: W7TJ26_9STRA (Gag-pol polyprotein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJ26_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 1.590e-17 Identity = 42/93 (45.16%), Postives = 59/93 (63.44%), Query Frame = 1 Query: 1 ALWLRRLARGLGLGVTAPTPIHEDNQRCSDIATNLFSERRVKHIDIKFHIVRERVESGEVVLVPTQRKDQLADLLTKPLPGPRTRFLREQILG 279 A+++R+L LG PT I EDNQ C + N + +R KHID+++H VRE+VES EV LV + QLAD+LTKPL R +R +++G Sbjct: 618 AVYIRQLLMDLGFKQDEPTVIMEDNQACIAMGNNPITHKRTKHIDVRYHFVREKVESKEVELVYIPTQHQLADILTKPLSSIRLAMIRNRMMG 710
BLAST of mRNA_P-wetherbeei_contig10470.2.1 vs. uniprot
Match: W7T0D1_9STRA (Gag-pol polyprotein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T0D1_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 1.600e-17 Identity = 42/93 (45.16%), Postives = 60/93 (64.52%), Query Frame = 1 Query: 1 ALWLRRLARGLGLGVTAPTPIHEDNQRCSDIATNLFSERRVKHIDIKFHIVRERVESGEVVLVPTQRKDQLADLLTKPLPGPRTRFLREQILG 279 A+++R+L LG PT I EDNQ C ++ N ++R KHID+++H VRE+VES EV LV + QLAD+LTKPL R +R +++G Sbjct: 619 AVYIRQLLMDLGFKQDEPTVIMEDNQACIAMSNNPIIQKRTKHIDVRYHFVREKVESKEVELVYIPTQHQLADILTKPLSNIRLAMIRNRMMG 711
BLAST of mRNA_P-wetherbeei_contig10470.2.1 vs. uniprot
Match: UPI001E1BA19B (secreted RxLR effector protein 161-like n=2 Tax=Daphnia magna TaxID=35525 RepID=UPI001E1BA19B) HSP 1 Score: 83.2 bits (204), Expect = 1.850e-17 Identity = 42/91 (46.15%), Postives = 57/91 (62.64%), Query Frame = 1 Query: 1 ALWLRRLARGLGLGVTAPTPIHEDNQRCSDIATNLFSERRVKHIDIKFHIVRERVESGEVVLVPTQRKDQLADLLTKPLPGPRTRFLREQI 273 A+WL+RL LGL T P P+ DNQ + N S +R KHIDIK+H +R++ E GE+ + +QLAD+LTKPL R +LRE+I Sbjct: 141 AVWLKRLLIELGLQETNPIPLLCDNQSAVRLVRNPDSHQRTKHIDIKYHYIRDQQEGGEINISYVDTNNQLADILTKPLAAARFNWLREEI 231
BLAST of mRNA_P-wetherbeei_contig10470.2.1 vs. uniprot
Match: A0A3S3PWW7_9ACAR (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Dinothrombium tinctorium TaxID=1965070 RepID=A0A3S3PWW7_9ACAR) HSP 1 Score: 85.5 bits (210), Expect = 2.130e-17 Identity = 39/90 (43.33%), Postives = 57/90 (63.33%), Query Frame = 1 Query: 4 LWLRRLARGLGLGVTAPTPIHEDNQRCSDIATNLFSERRVKHIDIKFHIVRERVESGEVVLVPTQRKDQLADLLTKPLPGPRTRFLREQI 273 +WLR L + +G PT I EDNQ C + + + R KHIDI+ H +RE+V+SG V + ++ +AD+LTKPLPGPR + LR ++ Sbjct: 490 VWLRNLLQEIGFKQEMPTTIFEDNQACIKLTKSTKNHARTKHIDIRHHFIREKVDSGLVEIEYMSSEEMIADILTKPLPGPRFQILRAKL 579 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10470.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig10470.2.1 >prot_P-wetherbeei_contig10470.2.1 ID=prot_P-wetherbeei_contig10470.2.1|Name=mRNA_P-wetherbeei_contig10470.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=95bp ALWLRRLARGLGLGVTAPTPIHEDNQRCSDIATNLFSERRVKHIDIKFHIback to top mRNA from alignment at P-wetherbeei_contig10470:1721..2005+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig10470.2.1 ID=mRNA_P-wetherbeei_contig10470.2.1|Name=mRNA_P-wetherbeei_contig10470.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=285bp|location=Sequence derived from alignment at P-wetherbeei_contig10470:1721..2005+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig10470:1721..2005+ >mRNA_P-wetherbeei_contig10470.2.1 ID=mRNA_P-wetherbeei_contig10470.2.1|Name=mRNA_P-wetherbeei_contig10470.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=285bp|location=Sequence derived from alignment at P-wetherbeei_contig10470:1721..2005+ (Phaeothamnion wetherbeei SAG_119_79)back to top |