mRNA_P-wetherbeei_contig10462.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig10462.1.1
Unique NamemRNA_P-wetherbeei_contig10462.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig10462.1.1 vs. uniprot
Match: A0A1F4AWG6_9PROT (Methylmalonyl-CoA mutase (Fragment) n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_66_14 TaxID=1797490 RepID=A0A1F4AWG6_9PROT)

HSP 1 Score: 664 bits (1714), Expect = 2.840e-230
Identity = 341/437 (78.03%), Postives = 385/437 (88.10%), Query Frame = 1
Query:    1 MTNLSDSKNLVYKAKHKIRFVTAASLFDGHDASINIMRRILQASGVEVIHLGHNRSVDEVVTAALQEDVQGLAVSSYQGGHIEYFKYMIDLLKARGGERIRVFGGGGGVIVAEEIAELQAYGVERIYSPEDGQKMGLQGMINDMLARCDFDTAQHAPKDLAAVKSGDRRALSQMITAIEAGTLDAKLRDALAKDAAATAVPALGITGTGGAGKSSITDEIVRRFRLDQDDKLKIAVIAVDPSRRKTGGALLGDRIRMNAIQSANVYMRSLATRASGAEIAVCLPDVIAACRVAGFDLVIVETSGIGQGDAAIVPHVNASLYVMTPEFGAASQLEKIDMLDFADFVAINKFDRKGAEDALRDVRKQVQRNREAFTQSPDTMPVYGTIASRFNDDGVTALYQGLVEKLSGFGLKPSAGKLPKVAGKTASGVNVVIPAQR 1311
            MT+LS+SK+L+YKAKHKIRFVTAASLFDGHDASINIMRRILQASG EVIHLGHNRSV+E+VTAAL+EDVQG+AVSSYQGGH+E+FKYM+DLL++RGG  ++VFGGGGGVIV EEI ELQ+YGV RIYSPEDGQ+MGLQGMINDML RCDFD A  APK L A+  GDRRAL+Q+ITA+E   LD  ++ AL + AA    PALGITGTGGAGKSS+TDE+VRRFRLDQ D+L IA++AVDPSRRKTGGALLGDRIRMNAI    ++MRSLATR SGAEIA CLPD IAACR AGFDLV+VETSGIGQGDAAI PHV+ASLYVMTPEFGAASQLEKIDMLDFADFVAINKFDR+GAEDALRDVRKQ+QRNR+AF QSPD MPV+GTIASRFNDDGVTALY  LVE+L   GLK + GKLP  A + +S V+ V+PA+R
Sbjct:    1 MTDLSESKSLIYKAKHKIRFVTAASLFDGHDASINIMRRILQASGCEVIHLGHNRSVEEIVTAALEEDVQGVAVSSYQGGHLEFFKYMVDLLRSRGGAHVQVFGGGGGVIVPEEIRELQSYGVARIYSPEDGQRMGLQGMINDMLVRCDFDPAGAAPKTLEALGGGDRRALAQLITALELDALDGGMKKALHEAAAGRRAPALGITGTGGAGKSSLTDELVRRFRLDQGDRLGIAILAVDPSRRKTGGALLGDRIRMNAIHGGRIFMRSLATRQSGAEIARCLPDAIAACRAAGFDLVVVETSGIGQGDAAIAPHVDASLYVMTPEFGAASQLEKIDMLDFADFVAINKFDRRGAEDALRDVRKQLQRNRQAFRQSPDEMPVFGTIASRFNDDGVTALYAALVERLREKGLKLATGKLPVPAARVSSNVHAVVPAKR 437          
BLAST of mRNA_P-wetherbeei_contig10462.1.1 vs. uniprot
Match: A0A536VXG5_9PROT (Methylmalonyl-CoA mutase (Fragment) n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536VXG5_9PROT)

HSP 1 Score: 636 bits (1640), Expect = 2.750e-226
Identity = 327/437 (74.83%), Postives = 381/437 (87.19%), Query Frame = 1
Query:    1 MTNLSDSKNLVYKAKHKIRFVTAASLFDGHDASINIMRRILQASGVEVIHLGHNRSVDEVVTAALQEDVQGLAVSSYQGGHIEYFKYMIDLLKARGGERIRVFGGGGGVIVAEEIAELQAYGVERIYSPEDGQKMGLQGMINDMLARCDFDTAQHAPKDLAAVKSGDRRALSQMITAIEAGTLDAKLRDALAKDAAATAVPALGITGTGGAGKSSITDEIVRRFRLDQDDKLKIAVIAVDPSRRKTGGALLGDRIRMNAIQSANVYMRSLATRASGAEIAVCLPDVIAACRVAGFDLVIVETSGIGQGDAAIVPHVNASLYVMTPEFGAASQLEKIDMLDFADFVAINKFDRKGAEDALRDVRKQVQRNREAFTQSPDTMPVYGTIASRFNDDGVTALYQGLVEKLSGFGLKPSAGKLPKVAGKTASGVNVVIPAQR 1311
            MT+LS S++  YK K+KIRFVTAASLFDGHDA+INIMRRILQASG EVIHLGHNR+VDEVV+AALQEDVQG+AVSSYQGGH+EYFKYMIDLL+ RGGE I+VFGGGGGVIVA+EI ELQAYGV RIY+PEDGQKMGLQGMINDMLARCD D +++APKDL A+KSGDRRAL++ ITA+E GT D +LRD   K+A A +VPALG+TGTGG+GKSS+TDE+VRRFRLDQ+D+L IA++AVDPSRRK+GGALLGDRIRMNAI    V+MRSLATR + +EI+  LPDV+AAC+VAGFDLV+VETSGIGQG+AAIV  V+ASLYVMTPE+GAASQLEKIDMLDFADF+AINKFDRKG +DALRDVRKQVQRNR+ F +S + MPVYGTIASRFNDDGVTALYQG++  L+  GLK   G L     + +S  N ++P  R
Sbjct:    1 MTDLSASRHTEYKTKNKIRFVTAASLFDGHDAAINIMRRILQASGAEVIHLGHNRAVDEVVSAALQEDVQGIAVSSYQGGHLEYFKYMIDLLRERGGENIKVFGGGGGVIVADEIRELQAYGVTRIYTPEDGQKMGLQGMINDMLARCDDDLSRYAPKDLEAIKSGDRRALARFITALENGTADPQLRDRTLKEADALSVPALGVTGTGGSGKSSLTDELVRRFRLDQEDRLDIAILAVDPSRRKSGGALLGDRIRMNAIAGGRVFMRSLATRGAESEISKSLPDVMAACKVAGFDLVLVETSGIGQGNAAIVQLVDASLYVMTPEYGAASQLEKIDMLDFADFIAINKFDRKGGQDALRDVRKQVQRNRKLFDRSAEEMPVYGTIASRFNDDGVTALYQGILPALAEHGLKIKPGTLLPTKARASSARNAIVPPSR 437          
BLAST of mRNA_P-wetherbeei_contig10462.1.1 vs. uniprot
Match: A0A0S8BBT1_9PROT (Fused isobutyryl-CoA mutase n=1 Tax=Betaproteobacteria bacterium SG8_39 TaxID=1703390 RepID=A0A0S8BBT1_9PROT)

HSP 1 Score: 657 bits (1696), Expect = 1.090e-225
Identity = 340/437 (77.80%), Postives = 377/437 (86.27%), Query Frame = 1
Query:    1 MTNLSDSKNLVYKAKHKIRFVTAASLFDGHDASINIMRRILQASGVEVIHLGHNRSVDEVVTAALQEDVQGLAVSSYQGGHIEYFKYMIDLLKARGGERIRVFGGGGGVIVAEEIAELQAYGVERIYSPEDGQKMGLQGMINDMLARCDFDTAQHAPKDLAAVKSGDRRALSQMITAIEAGTLDAKLRDALAKDAAATAVPALGITGTGGAGKSSITDEIVRRFRLDQDDKLKIAVIAVDPSRRKTGGALLGDRIRMNAIQSANVYMRSLATRASGAEIAVCLPDVIAACRVAGFDLVIVETSGIGQGDAAIVPHVNASLYVMTPEFGAASQLEKIDMLDFADFVAINKFDRKGAEDALRDVRKQVQRNREAFTQSPDTMPVYGTIASRFNDDGVTALYQGLVEKLSGFGLKPSAGKLPKVAGKTASGVNVVIPAQR 1311
            MT+LSDS+NL+YKAKHKIRFVTAASLFDGHDASINIMRRI+QASG EVIHLGHNRSV++VVTAALQEDVQG+AVSSYQGGH+EYFKYMIDLL+ RGG  I+VFGGGGGVIV  EI  L AYGV RIYSPEDGQKMGLQGMINDMLARCDFD   H+P DL  V  GDRRAL+Q+ITA+E G  +A L+  L   AA    P LGITGTGGAGKSS+TDEIVRRFRLDQDD+LKIA++AVDPSRRKTGGALLGDRIRMNAI    V+MRSLATR SGAEI+  +PD +AACR AGFDLVIVETSGIGQGDAAIVPHV+ SLYVMTPEFGAASQLEKIDMLD+ADFVAINKFDRKGAEDALRDVRKQVQRNREAF  +PD MPV+GT+ASRF+DDGVTALYQ +V +L   GLK   G+LPKV    +S V+ V+P +R
Sbjct:    1 MTDLSDSQNLIYKAKHKIRFVTAASLFDGHDASINIMRRIVQASGAEVIHLGHNRSVEDVVTAALQEDVQGIAVSSYQGGHLEYFKYMIDLLRERGGAHIQVFGGGGGVIVPAEIKALHAYGVARIYSPEDGQKMGLQGMINDMLARCDFDPTTHSPADLERVGKGDRRALAQLITALELGAANAALKQRLQDAAARRRAPVLGITGTGGAGKSSLTDEIVRRFRLDQDDRLKIAIVAVDPSRRKTGGALLGDRIRMNAIHGDAVFMRSLATRGSGAEISQAVPDAVAACRAAGFDLVIVETSGIGQGDAAIVPHVDVSLYVMTPEFGAASQLEKIDMLDYADFVAINKFDRKGAEDALRDVRKQVQRNREAFRAAPDEMPVFGTVASRFSDDGVTALYQAIVARLGEKGLKLKPGRLPKVDAHVSSRVDAVVPPKR 437          
BLAST of mRNA_P-wetherbeei_contig10462.1.1 vs. uniprot
Match: A0A522VVW4_9PROT (Fused isobutyryl-CoA mutase n=4 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A522VVW4_9PROT)

HSP 1 Score: 657 bits (1694), Expect = 2.180e-225
Identity = 334/437 (76.43%), Postives = 382/437 (87.41%), Query Frame = 1
Query:    1 MTNLSDSKNLVYKAKHKIRFVTAASLFDGHDASINIMRRILQASGVEVIHLGHNRSVDEVVTAALQEDVQGLAVSSYQGGHIEYFKYMIDLLKARGGERIRVFGGGGGVIVAEEIAELQAYGVERIYSPEDGQKMGLQGMINDMLARCDFDTAQHAPKDLAAVKSGDRRALSQMITAIEAGTLDAKLRDALAKDAAATAVPALGITGTGGAGKSSITDEIVRRFRLDQDDKLKIAVIAVDPSRRKTGGALLGDRIRMNAIQSANVYMRSLATRASGAEIAVCLPDVIAACRVAGFDLVIVETSGIGQGDAAIVPHVNASLYVMTPEFGAASQLEKIDMLDFADFVAINKFDRKGAEDALRDVRKQVQRNREAFTQSPDTMPVYGTIASRFNDDGVTALYQGLVEKLSGFGLKPSAGKLPKVAGKTASGVNVVIPAQR 1311
            MT+LSDS+ L YKAKHKIRFVTAASLFDGHDASINIMRRILQASG EVIHLGHNRSV+E+VTAAL+EDVQG+AVSSYQGGH+E+F+YM+DLL++RGG  I+VFGGGGGVIVAEE+  L  YGV RIYSPEDGQ+MGLQGMINDMLARCDFD  QHAPK L A+  G+RRAL+Q+ITA+E   LDA+LR  L   AA    P LGITGTGGAGKSS+TDE++RRFRLDQ D L+IA++AVDPSRRKTGGALLGDRIRMNAI    V+MRSLATRASGAEIA CLP+ IAACR A FDLV+VETSGIGQGD+ +VPHV+ +LYVMTPEFGAASQLEKIDMLDFADFVAINKFDR+GAEDALRDVRKQ+QRNR+AFT+ P+ MPV+GTIASRFNDDGVTALY  L  +L   GLK +AG+LP  AG+ +S V+VV+PA+R
Sbjct:    1 MTDLSDSRKLAYKAKHKIRFVTAASLFDGHDASINIMRRILQASGAEVIHLGHNRSVEEIVTAALEEDVQGIAVSSYQGGHLEFFRYMVDLLRSRGGAHIQVFGGGGGVIVAEEMKALHDYGVARIYSPEDGQRMGLQGMINDMLARCDFDPTQHAPKTLDALLEGERRALAQIITALELDVLDARLRQGLHAAAAQNPAPVLGITGTGGAGKSSLTDELIRRFRLDQGDALRIAILAVDPSRRKTGGALLGDRIRMNAIHGGRVFMRSLATRASGAEIARCLPEAIAACRAARFDLVVVETSGIGQGDSGVVPHVDVALYVMTPEFGAASQLEKIDMLDFADFVAINKFDRRGAEDALRDVRKQLQRNRQAFTRPPEEMPVFGTIASRFNDDGVTALYAALAARLKEKGLKLAAGRLPVAAGRVSSNVHVVVPAKR 437          
BLAST of mRNA_P-wetherbeei_contig10462.1.1 vs. uniprot
Match: A0A1F3Z7P5_9PROT (Methylmalonyl-CoA mutase (Fragment) n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_67_12 TaxID=1797483 RepID=A0A1F3Z7P5_9PROT)

HSP 1 Score: 645 bits (1664), Expect = 3.840e-224
Identity = 330/437 (75.51%), Postives = 382/437 (87.41%), Query Frame = 1
Query:    1 MTNLSDSKNLVYKAKHKIRFVTAASLFDGHDASINIMRRILQASGVEVIHLGHNRSVDEVVTAALQEDVQGLAVSSYQGGHIEYFKYMIDLLKARGGERIRVFGGGGGVIVAEEIAELQAYGVERIYSPEDGQKMGLQGMINDMLARCDFDTAQHAPKDLAAVKSGDRRALSQMITAIEAGTLDAKLRDALAKDAAATAVPALGITGTGGAGKSSITDEIVRRFRLDQDDKLKIAVIAVDPSRRKTGGALLGDRIRMNAIQSANVYMRSLATRASGAEIAVCLPDVIAACRVAGFDLVIVETSGIGQGDAAIVPHVNASLYVMTPEFGAASQLEKIDMLDFADFVAINKFDRKGAEDALRDVRKQVQRNREAFTQSPDTMPVYGTIASRFNDDGVTALYQGLVEKLSGFGLKPSAGKLPKVAGKTASGVNVVIPAQR 1311
            MT+LS+SK+L+YKAKHKIRFVTAASLFDGHDASINIMRRILQASG EVIHLGHNRSVDE+VTAAL EDVQG+AVSSYQGGHIE+FKYMIDLL+ RGG  I+VFGGGGGVIV  E+ ELQ YGV  IYSPEDGQ+MGLQGMINDMLARCDFD  QHAPKDL A+K+GD+RAL+Q+I+ +EAG L+  L+ +L + A     P LG+TGTGGAGKSS+TDE+VRRFRLDQ ++L+IA+++VDP+RRKTGGALLGDRIRMNAI    V+MRSLATR SGAEIA CL D +AA R AGFDL+IVET+GIGQGDAAIVP V+ SLYVMTPEFGAASQLEKIDMLDFADFV +NKFDR+GAEDALRDVRKQ+QRNR+AF  +P+ MPVYGTIASRFNDDGVTALY GL ++L   GL+ +AGKL + A K +S V+VV+PA+R
Sbjct:    1 MTDLSESKSLIYKAKHKIRFVTAASLFDGHDASINIMRRILQASGAEVIHLGHNRSVDEIVTAALDEDVQGVAVSSYQGGHIEFFKYMIDLLRERGGAHIQVFGGGGGVIVPAEVKELQDYGVACIYSPEDGQRMGLQGMINDMLARCDFDPTQHAPKDLKALKAGDQRALAQVISGLEAGALEEPLKRSLLESAQKNRAPVLGVTGTGGAGKSSLTDELVRRFRLDQGEELRIAILSVDPTRRKTGGALLGDRIRMNAIDGPGVFMRSLATRESGAEIAACLADALAAARAAGFDLLIVETAGIGQGDAAIVPLVDVSLYVMTPEFGAASQLEKIDMLDFADFVCVNKFDRRGAEDALRDVRKQLQRNRQAFKVAPEEMPVYGTIASRFNDDGVTALYHGLADRLREKGLRLAAGKLLRPAVKASSNVHVVVPAKR 437          
BLAST of mRNA_P-wetherbeei_contig10462.1.1 vs. uniprot
Match: A0A537DM09_9PROT (Methylmalonyl-CoA mutase (Fragment) n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537DM09_9PROT)

HSP 1 Score: 630 bits (1624), Expect = 5.450e-222
Identity = 327/437 (74.83%), Postives = 376/437 (86.04%), Query Frame = 1
Query:    1 MTNLSDSKNLVYKAKHKIRFVTAASLFDGHDASINIMRRILQASGVEVIHLGHNRSVDEVVTAALQEDVQGLAVSSYQGGHIEYFKYMIDLLKARGGERIRVFGGGGGVIVAEEIAELQAYGVERIYSPEDGQKMGLQGMINDMLARCDFDTAQHAPKDLAAVKSGDRRALSQMITAIEAGTLDAKLRDALAKDAAATAVPALGITGTGGAGKSSITDEIVRRFRLDQDDKLKIAVIAVDPSRRKTGGALLGDRIRMNAIQSANVYMRSLATRASGAEIAVCLPDVIAACRVAGFDLVIVETSGIGQGDAAIVPHVNASLYVMTPEFGAASQLEKIDMLDFADFVAINKFDRKGAEDALRDVRKQVQRNREAFTQSPDTMPVYGTIASRFNDDGVTALYQGLVEKLSGFGLKPSAGKLPKVAGKTASGVNVVIPAQR 1311
            MT+LSDS  LVYKAKHKIRFVTAASLFDGHDASINIMRRILQASG EVIHLGHNRSV+E+V AALQEDVQG+AVSSYQGGHIE+FKYM+DLL++RGGE I+VFGGGGGVIV  EI ELQ YGV RIYSPEDGQ+MGLQGMINDMLARCDFD AQHAPK+L   K GD RAL++ ITA+E+G L  K++D+L K+   T VP LG+TGTGGAGKSS+TDE+VRRFRLDQ D L+IAV++VDP+RRKTGGALLGDRIRMNAI    ++MRS ATR +G+ ++  L D IAAC+ AGF+L+IVET+GIGQGDAAIVPH + SLYVMTPEFGAASQLEKIDMLDFADFVAINKFDRKGAEDALRDVRKQVQRNR+AF  S + MPV+GTIASRFNDDGVTALY  +  +L+  GLK   G+LP++  K  S V+V+IP +R
Sbjct:    1 MTDLSDSAKLVYKAKHKIRFVTAASLFDGHDASINIMRRILQASGAEVIHLGHNRSVEEIVNAALQEDVQGIAVSSYQGGHIEFFKYMLDLLRSRGGEHIKVFGGGGGVIVPAEIKELQDYGVARIYSPEDGQRMGLQGMINDMLARCDFDPAQHAPKEL---KKGDLRALARTITALESGVL--KIKDSLHKEK--TGVPVLGVTGTGGAGKSSLTDELVRRFRLDQGDALRIAVLSVDPTRRKTGGALLGDRIRMNAIHQPGIFMRSFATREAGSSLSAALGDAIAACQAAGFELIIVETAGIGQGDAAIVPHADVSLYVMTPEFGAASQLEKIDMLDFADFVAINKFDRKGAEDALRDVRKQVQRNRQAFGTSAEQMPVFGTIASRFNDDGVTALYHAVAARLAEKGLKLKPGRLPRLDAKVPSDVHVIIPPKR 430          
BLAST of mRNA_P-wetherbeei_contig10462.1.1 vs. uniprot
Match: A0A1F4CJP9_9PROT (Methylmalonyl-CoA mutase (Fragment) n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_64_23 TaxID=1797499 RepID=A0A1F4CJP9_9PROT)

HSP 1 Score: 635 bits (1637), Expect = 8.710e-221
Identity = 331/446 (74.22%), Postives = 382/446 (85.65%), Query Frame = 1
Query:    1 MTNLSDSKNL-VYKAKHKIRFVTAASLFDGHDASINIMRRILQASGVEVIHLGHNRSVDEVVTAALQEDVQGLAVSSYQGGHIEYFKYMIDLLKARGGERIRVFGGGGGVIVAEEIAELQAYGVERIYSPEDGQKMGLQGMINDMLARCDFDTAQHAPKDLAAVKSGDRRALSQMITAIEAGTLD--------AKLRDALAKDAAATAVPALGITGTGGAGKSSITDEIVRRFRLDQDDKLKIAVIAVDPSRRKTGGALLGDRIRMNAIQSANVYMRSLATRASGAEIAVCLPDVIAACRVAGFDLVIVETSGIGQGDAAIVPHVNASLYVMTPEFGAASQLEKIDMLDFADFVAINKFDRKGAEDALRDVRKQVQRNREAFTQSPDTMPVYGTIASRFNDDGVTALYQGLVEKLSGFGLKPSAGKLPKVAGKTASGVNVVIPAQR 1311
            MT+LS S +L VYK K+K+RFVTAASLFDGHDASINIMRRILQ +G EVIHLGHNRSV+EVVTAALQEDVQG+A+SSYQGGH+EYFKYM+DLL+ RGGERI+VFGGGGGVIV EE+AEL AYGV RIYSPEDGQKMGLQGMINDM+ RCD D AQ AP+DL AVK GDRR L+Q+ITA+E  T          AKLR  + K+A A  +P LGITGTGG+GKSS+TDE++RRFRLDQDDKL IAVIAVDPSRRK+GGALLGDRIRMNAI  ++++MRSLATRA+G+EI+  LP+ +AAC++AGFDL++VETSGIGQGDAAIVP V+ SLYVMTPEFGAASQLEKIDMLDFADFVAINK+DRKGA DALRDVRKQ QRN +AF   P+TMPVYGTIASRFNDDGVTALYQ L+ +L+  GLK   GKLPKV  + ++   V++P QR
Sbjct:    1 MTDLSISADLTVYKPKYKVRFVTAASLFDGHDASINIMRRILQGTGCEVIHLGHNRSVEEVVTAALQEDVQGVAISSYQGGHVEYFKYMLDLLRERGGERIKVFGGGGGVIVPEEVAELHAYGVARIYSPEDGQKMGLQGMINDMVMRCDVDLAQFAPRDLKAVKGGDRRRLAQLITALENQTAAPGAGEEGMAKLRATVLKEAEALDIPTLGITGTGGSGKSSLTDELIRRFRLDQDDKLNIAVIAVDPSRRKSGGALLGDRIRMNAINGSHIFMRSLATRAAGSEISAALPEALAACKLAGFDLIVVETSGIGQGDAAIVPLVDVSLYVMTPEFGAASQLEKIDMLDFADFVAINKYDRKGAADALRDVRKQYQRNSDAFKFPPETMPVYGTIASRFNDDGVTALYQHLLPRLAEHGLKIKPGKLPKVEVRASTSKAVIVPPQR 446          
BLAST of mRNA_P-wetherbeei_contig10462.1.1 vs. uniprot
Match: A0A521XVQ6_9PROT (Fused isobutyryl-CoA mutase n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A521XVQ6_9PROT)

HSP 1 Score: 638 bits (1646), Expect = 4.570e-218
Identity = 331/442 (74.89%), Postives = 381/442 (86.20%), Query Frame = 1
Query:    1 MTNLSDSKNL-VYKAKHKIRFVTAASLFDGHDASINIMRRILQASGVEVIHLGHNRSVDEVVTAALQEDVQGLAVSSYQGGHIEYFKYMIDLLKARGGERIRVFGGGGGVIVAEEIAELQAYGVERIYSPEDGQKMGLQGMINDMLARCDFDTAQHAPKDLAAVKSGDR----RALSQMITAIEAGTLDAKLRDALAKDAAATAVPALGITGTGGAGKSSITDEIVRRFRLDQDDKLKIAVIAVDPSRRKTGGALLGDRIRMNAIQSANVYMRSLATRASGAEIAVCLPDVIAACRVAGFDLVIVETSGIGQGDAAIVPHVNASLYVMTPEFGAASQLEKIDMLDFADFVAINKFDRKGAEDALRDVRKQVQRNREAFTQSPDTMPVYGTIASRFNDDGVTALYQGLVEKLSGFGLKPSAGKLPKVAGKTASGVNVVIPAQR 1311
            MT+LS S  L VYK KHK+RFVTAASLFDGHDASINIMRRILQ SG EVIHLGHNRSV+EVVTAALQED QG+A+SSYQGGH+EYFKYM+DLL+ RGGERI+VFGGGGGVIV +EI ELQAYGV RIYSPEDGQK+GLQGMINDM+ RCD D AQ+AP+DL  VK  DR    RAL+Q+ITA+E  T D+KLRDA+ K+AA   +P LG+TGTGG+GKSS+TDE++RRFRLDQ+D L IAVIAVDPSRRK+GGALLGDRIRMNAI  + ++MRSLATRA+G+EI+  LP+ +AAC+VAGFDL++VETSGIGQGDAAIVP V+ SLYVMTPEFGAASQLEKIDMLDFADFVAINK+DRKGA DALRDVRKQ QRNR+AF   P+TMPVYGTIASRFNDDGVTALYQ L+ +L   GLK  +GKLPKV  + +S   V++P  R
Sbjct:    1 MTDLSISAKLTVYKPKHKVRFVTAASLFDGHDASINIMRRILQGSGCEVIHLGHNRSVEEVVTAALQEDAQGVAISSYQGGHVEYFKYMLDLLRERGGERIQVFGGGGGVIVPDEITELQAYGVARIYSPEDGQKIGLQGMINDMVMRCDVDLAQYAPRDLKIVKGADRVKAHRALAQLITALENKTCDSKLRDAIFKEAATLDIPTLGVTGTGGSGKSSLTDELIRRFRLDQEDALDIAVIAVDPSRRKSGGALLGDRIRMNAINGSRIFMRSLATRAAGSEISEALPEALAACKVAGFDLIVVETSGIGQGDAAIVPLVDVSLYVMTPEFGAASQLEKIDMLDFADFVAINKYDRKGAADALRDVRKQYQRNRDAFKFPPETMPVYGTIASRFNDDGVTALYQALLPRLVELGLKCKSGKLPKVKVRASSNKAVILPPAR 442          
BLAST of mRNA_P-wetherbeei_contig10462.1.1 vs. uniprot
Match: A0A537AZA0_9PROT (Fused isobutyryl-CoA mutase n=5 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537AZA0_9PROT)

HSP 1 Score: 637 bits (1642), Expect = 1.450e-217
Identity = 327/437 (74.83%), Postives = 376/437 (86.04%), Query Frame = 1
Query:    1 MTNLSDSKNLVYKAKHKIRFVTAASLFDGHDASINIMRRILQASGVEVIHLGHNRSVDEVVTAALQEDVQGLAVSSYQGGHIEYFKYMIDLLKARGGERIRVFGGGGGVIVAEEIAELQAYGVERIYSPEDGQKMGLQGMINDMLARCDFDTAQHAPKDLAAVKSGDRRALSQMITAIEAGTLDAKLRDALAKDAAATAVPALGITGTGGAGKSSITDEIVRRFRLDQDDKLKIAVIAVDPSRRKTGGALLGDRIRMNAIQSANVYMRSLATRASGAEIAVCLPDVIAACRVAGFDLVIVETSGIGQGDAAIVPHVNASLYVMTPEFGAASQLEKIDMLDFADFVAINKFDRKGAEDALRDVRKQVQRNREAFTQSPDTMPVYGTIASRFNDDGVTALYQGLVEKLSGFGLKPSAGKLPKVAGKTASGVNVVIPAQR 1311
            MT+LS S++  YK K+KIRFVTAASLFDGHDA+INIMRRILQASG EVIHLGHNRS DEVVTAALQEDVQG+AVSSYQGGH+EYFKYMIDLL+ R GE IRVFGGGGGVIVAEEI ELQAYGV RIY+PEDGQKMGLQGMINDML RCD D ++HAPK+L  VK GDRR L+++ITA+E G +D KLRD + K+A A +VP LG+TGTGG+GKSS+ DE+VRR RLDQ+D+L IA++AVDPSRRK+GGALLGDRIRMNAI  + V+MRSLATR + +EI+  LP+VIAAC++AGFDLV+VETSGIGQGDAAIVP V+ASLYVMTPE+GA SQLEKIDMLDFADFVAINKFDRKG EDALRDVRKQVQRNR  F +S + MPVYGTIASRFNDDGVTALYQG++  L+  GLK   G LP V  + +S  N ++P  R
Sbjct:    1 MTDLSASRHTEYKTKNKIRFVTAASLFDGHDAAINIMRRILQASGAEVIHLGHNRSADEVVTAALQEDVQGIAVSSYQGGHVEYFKYMIDLLREREGENIRVFGGGGGVIVAEEIRELQAYGVARIYTPEDGQKMGLQGMINDMLERCDQDLSRHAPKELNGVKGGDRRGLARLITALENGAIDHKLRDRIQKEADALSVPVLGVTGTGGSGKSSLADELVRRLRLDQEDRLGIAILAVDPSRRKSGGALLGDRIRMNAIAGSRVFMRSLATRGAESEISKSLPEVIAACKIAGFDLVLVETSGIGQGDAAIVPLVDASLYVMTPEYGAPSQLEKIDMLDFADFVAINKFDRKGGEDALRDVRKQVQRNRRLFDRSAEEMPVYGTIASRFNDDGVTALYQGILPALAEHGLKIKPGSLPPVKARASSARNAIVPPSR 437          
BLAST of mRNA_P-wetherbeei_contig10462.1.1 vs. uniprot
Match: A0A537B9R0_9PROT (Methylmalonyl-CoA mutase (Fragment) n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537B9R0_9PROT)

HSP 1 Score: 613 bits (1580), Expect = 2.220e-216
Identity = 319/437 (73.00%), Postives = 367/437 (83.98%), Query Frame = 1
Query:    1 MTNLSDSKNLVYKAKHKIRFVTAASLFDGHDASINIMRRILQASGVEVIHLGHNRSVDEVVTAALQEDVQGLAVSSYQGGHIEYFKYMIDLLKARGGERIRVFGGGGGVIVAEEIAELQAYGVERIYSPEDGQKMGLQGMINDMLARCDFDTAQHAPKDLAAVKSGDRRALSQMITAIEAGTLDAKLRDALAKDAAATAVPALGITGTGGAGKSSITDEIVRRFRLDQDDKLKIAVIAVDPSRRKTGGALLGDRIRMNAIQSANVYMRSLATRASGAEIAVCLPDVIAACRVAGFDLVIVETSGIGQGDAAIVPHVNASLYVMTPEFGAASQLEKIDMLDFADFVAINKFDRKGAEDALRDVRKQVQRNREAFTQSPDTMPVYGTIASRFNDDGVTALYQGLVEKLSGFGLKPSAGKLPKVAGKTASGVNVVIPAQR 1311
            MT+LSDS  LVYKAKHKIRFVTAASLFDGHDASINIMRRILQASG EVIHLGHNRSV+E+V AALQEDVQG+AVSSYQGGHIE+FKYM+DLL++RGGE I+VFGGGGGVIV  EI EL  YG+ RIYSPEDGQ+MGLQGM+NDMLARCDFD A +AP++L   K GD R+L+Q I+A+E G   A    AL         P LG+TGTGGAGKSS+TDE+VRRFRLDQ D L+IAV++VDP+RRKTGGALLGDRIRMNAI  A ++MRS ATR +G+ ++  L D IAAC+ AGF+L+IVET+GIGQGDAAIVPHV+ SLYVMTPEFGAASQLEKIDMLDFADFVAINKFDR+GA+DALRDV KQVQRNR+AF  S + MPVYGTIASRFNDDGVTALY  +  +L+  GLK   G+LPK   K +SGVNV+IP +R
Sbjct:    1 MTDLSDSAKLVYKAKHKIRFVTAASLFDGHDASINIMRRILQASGAEVIHLGHNRSVEEIVNAALQEDVQGVAVSSYQGGHIEFFKYMLDLLRSRGGEHIKVFGGGGGVIVPAEIRELHDYGIARIYSPEDGQRMGLQGMVNDMLARCDFDPALYAPEEL---KKGDLRSLAQTISALELGRKQALPAKALK-------APVLGVTGTGGAGKSSLTDELVRRFRLDQGDDLRIAVLSVDPTRRKTGGALLGDRIRMNAIHHAGIFMRSFATRDTGSSLSAALGDAIAACKAAGFELIIVETAGIGQGDAAIVPHVDVSLYVMTPEFGAASQLEKIDMLDFADFVAINKFDRRGAQDALRDVSKQVQRNRQAFGASAEHMPVYGTIASRFNDDGVTALYHAVAARLAEKGLKLKPGRLPKPDAKVSSGVNVIIPPKR 427          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10462.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1F4AWG6_9PROT2.840e-23078.03Methylmalonyl-CoA mutase (Fragment) n=1 Tax=Betapr... [more]
A0A536VXG5_9PROT2.750e-22674.83Methylmalonyl-CoA mutase (Fragment) n=2 Tax=Betapr... [more]
A0A0S8BBT1_9PROT1.090e-22577.80Fused isobutyryl-CoA mutase n=1 Tax=Betaproteobact... [more]
A0A522VVW4_9PROT2.180e-22576.43Fused isobutyryl-CoA mutase n=4 Tax=unclassified B... [more]
A0A1F3Z7P5_9PROT3.840e-22475.51Methylmalonyl-CoA mutase (Fragment) n=1 Tax=Betapr... [more]
A0A537DM09_9PROT5.450e-22274.83Methylmalonyl-CoA mutase (Fragment) n=1 Tax=Betapr... [more]
A0A1F4CJP9_9PROT8.710e-22174.22Methylmalonyl-CoA mutase (Fragment) n=1 Tax=Betapr... [more]
A0A521XVQ6_9PROT4.570e-21874.89Fused isobutyryl-CoA mutase n=2 Tax=unclassified B... [more]
A0A537AZA0_9PROT1.450e-21774.83Fused isobutyryl-CoA mutase n=5 Tax=Betaproteobact... [more]
A0A537B9R0_9PROT2.220e-21673.00Methylmalonyl-CoA mutase (Fragment) n=1 Tax=Betapr... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10462contigP-wetherbeei_contig10462:2..1312 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog522306.CAP2UW1_0492
Preferred nameicmF
PFAMsArgK,B12-binding,MM_CoA_mutase
Model size1311
Max annot lvl28216|Betaproteobacteria
KEGG koko:K11942
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000287,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0006139,GO:0006163,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009117,GO:0009150,GO:0009259,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016866,GO:0017076,GO:0017111,GO:0019001,GO:0019637,GO:0019693,GO:0019842,GO:0031419,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0034784,GO:0035383,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043603,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0046872,GO:0046906,GO:0047727,GO:0048037,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:0097159,GO:0097367,GO:1901135,GO:1901265,GO:1901360,GO:1901363,GO:1901564
Exons1
Evalue8.78e-208
EggNOG OGsCOG1703@1|root,COG1884@1|root,COG2185@1|root,COG1703@2|Bacteria,COG1884@2|Bacteria,COG2185@2|Bacteria,1MUXX@1224|Proteobacteria,2VH05@28216|Betaproteobacteria,1KQDH@119066|unclassified Betaproteobacteria
EC5.4.99.13
DescriptionCatalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
Cds size1311
COG categoryEI
BRITEko00000,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185870.4208608-CDS-P-wetherbeei_contig10462:1..13121683185870.4208608-CDS-P-wetherbeei_contig10462:1..1312Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10462 2..1312 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10462.1.1prot_P-wetherbeei_contig10462.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig10462 2..1312 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig10462.1.1

>prot_P-wetherbeei_contig10462.1.1 ID=prot_P-wetherbeei_contig10462.1.1|Name=mRNA_P-wetherbeei_contig10462.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=437bp
MTNLSDSKNLVYKAKHKIRFVTAASLFDGHDASINIMRRILQASGVEVIH
LGHNRSVDEVVTAALQEDVQGLAVSSYQGGHIEYFKYMIDLLKARGGERI
RVFGGGGGVIVAEEIAELQAYGVERIYSPEDGQKMGLQGMINDMLARCDF
DTAQHAPKDLAAVKSGDRRALSQMITAIEAGTLDAKLRDALAKDAAATAV
PALGITGTGGAGKSSITDEIVRRFRLDQDDKLKIAVIAVDPSRRKTGGAL
LGDRIRMNAIQSANVYMRSLATRASGAEIAVCLPDVIAACRVAGFDLVIV
ETSGIGQGDAAIVPHVNASLYVMTPEFGAASQLEKIDMLDFADFVAINKF
DRKGAEDALRDVRKQVQRNREAFTQSPDTMPVYGTIASRFNDDGVTALYQ
GLVEKLSGFGLKPSAGKLPKVAGKTASGVNVVIPAQR
back to top

mRNA from alignment at P-wetherbeei_contig10462:2..1312-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig10462.1.1 ID=mRNA_P-wetherbeei_contig10462.1.1|Name=mRNA_P-wetherbeei_contig10462.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1311bp|location=Sequence derived from alignment at P-wetherbeei_contig10462:2..1312- (Phaeothamnion wetherbeei SAG_119_79)
ATGACCAACCTCAGCGACTCGAAGAACCTCGTCTACAAGGCGAAGCACAA GATCCGCTTCGTCACCGCGGCCAGCCTCTTCGACGGCCACGACGCGTCGA TCAACATCATGCGGCGCATCCTGCAGGCCTCGGGCGTGGAGGTGATCCAC CTGGGGCACAACCGCTCGGTGGACGAGGTCGTGACCGCCGCGCTGCAGGA GGACGTGCAGGGCCTGGCGGTGTCGTCCTACCAGGGCGGGCACATCGAAT ACTTCAAGTACATGATCGACCTGCTGAAGGCGCGCGGCGGCGAGCGCATC AGGGTGTTCGGCGGCGGCGGCGGCGTGATCGTGGCCGAGGAGATCGCCGA GCTGCAGGCCTACGGCGTGGAGCGCATCTATTCGCCCGAGGACGGCCAGA AGATGGGCCTGCAGGGCATGATCAACGACATGCTTGCGCGCTGCGACTTC GATACCGCGCAGCACGCCCCGAAGGACCTCGCGGCCGTCAAGTCGGGCGA CCGGCGCGCCCTGTCGCAGATGATCACCGCGATCGAGGCCGGCACGCTGG ACGCGAAGCTCAGGGACGCCCTCGCGAAGGACGCCGCCGCGACGGCCGTC CCGGCGCTCGGCATCACGGGTACCGGCGGCGCCGGCAAGTCCTCGATCAC CGACGAGATCGTGCGGCGTTTCCGCCTCGACCAGGACGACAAGCTGAAGA TCGCCGTGATCGCGGTCGACCCCTCGCGCAGGAAGACCGGCGGGGCGCTG TTGGGAGATCGCATCCGCATGAACGCGATCCAGTCGGCCAACGTCTACAT GCGCTCCCTTGCGACGCGCGCTTCGGGCGCCGAGATCGCCGTCTGCCTGC CGGATGTGATCGCCGCGTGCCGCGTGGCGGGGTTCGACCTCGTGATCGTC GAGACTTCCGGCATCGGCCAGGGCGACGCGGCCATCGTGCCGCATGTCAA TGCCTCGCTTTACGTGATGACGCCGGAGTTCGGTGCCGCGAGCCAGCTCG AGAAGATCGACATGCTCGACTTTGCCGACTTCGTCGCGATCAACAAGTTC GACCGCAAGGGCGCCGAGGACGCGCTGCGGGACGTCAGGAAACAGGTCCA GAGGAACCGAGAGGCCTTCACGCAGTCGCCCGACACAATGCCGGTCTATG GCACGATCGCCTCGCGCTTCAACGACGACGGCGTGACGGCGCTGTACCAG GGGCTGGTGGAGAAACTCTCCGGATTCGGCCTCAAGCCCTCCGCCGGCAA GCTGCCGAAGGTGGCCGGCAAGACCGCCTCGGGCGTGAACGTGGTGATTC CCGCGCAGCGT
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig10462:2..1312-

>mRNA_P-wetherbeei_contig10462.1.1 ID=mRNA_P-wetherbeei_contig10462.1.1|Name=mRNA_P-wetherbeei_contig10462.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1311bp|location=Sequence derived from alignment at P-wetherbeei_contig10462:2..1312- (Phaeothamnion wetherbeei SAG_119_79)
ATGACCAACCTCAGCGACTCGAAGAACCTCGTCTACAAGGCGAAGCACAA
GATCCGCTTCGTCACCGCGGCCAGCCTCTTCGACGGCCACGACGCGTCGA
TCAACATCATGCGGCGCATCCTGCAGGCCTCGGGCGTGGAGGTGATCCAC
CTGGGGCACAACCGCTCGGTGGACGAGGTCGTGACCGCCGCGCTGCAGGA
GGACGTGCAGGGCCTGGCGGTGTCGTCCTACCAGGGCGGGCACATCGAAT
ACTTCAAGTACATGATCGACCTGCTGAAGGCGCGCGGCGGCGAGCGCATC
AGGGTGTTCGGCGGCGGCGGCGGCGTGATCGTGGCCGAGGAGATCGCCGA
GCTGCAGGCCTACGGCGTGGAGCGCATCTATTCGCCCGAGGACGGCCAGA
AGATGGGCCTGCAGGGCATGATCAACGACATGCTTGCGCGCTGCGACTTC
GATACCGCGCAGCACGCCCCGAAGGACCTCGCGGCCGTCAAGTCGGGCGA
CCGGCGCGCCCTGTCGCAGATGATCACCGCGATCGAGGCCGGCACGCTGG
ACGCGAAGCTCAGGGACGCCCTCGCGAAGGACGCCGCCGCGACGGCCGTC
CCGGCGCTCGGCATCACGGGTACCGGCGGCGCCGGCAAGTCCTCGATCAC
CGACGAGATCGTGCGGCGTTTCCGCCTCGACCAGGACGACAAGCTGAAGA
TCGCCGTGATCGCGGTCGACCCCTCGCGCAGGAAGACCGGCGGGGCGCTG
TTGGGAGATCGCATCCGCATGAACGCGATCCAGTCGGCCAACGTCTACAT
GCGCTCCCTTGCGACGCGCGCTTCGGGCGCCGAGATCGCCGTCTGCCTGC
CGGATGTGATCGCCGCGTGCCGCGTGGCGGGGTTCGACCTCGTGATCGTC
GAGACTTCCGGCATCGGCCAGGGCGACGCGGCCATCGTGCCGCATGTCAA
TGCCTCGCTTTACGTGATGACGCCGGAGTTCGGTGCCGCGAGCCAGCTCG
AGAAGATCGACATGCTCGACTTTGCCGACTTCGTCGCGATCAACAAGTTC
GACCGCAAGGGCGCCGAGGACGCGCTGCGGGACGTCAGGAAACAGGTCCA
GAGGAACCGAGAGGCCTTCACGCAGTCGCCCGACACAATGCCGGTCTATG
GCACGATCGCCTCGCGCTTCAACGACGACGGCGTGACGGCGCTGTACCAG
GGGCTGGTGGAGAAACTCTCCGGATTCGGCCTCAAGCCCTCCGCCGGCAA
GCTGCCGAAGGTGGCCGGCAAGACCGCCTCGGGCGTGAACGTGGTGATTC
CCGCGCAGCGT
back to top