mRNA_P-wetherbeei_contig10455.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig10455.1.1
Unique NamemRNA_P-wetherbeei_contig10455.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig10455.1.1 vs. uniprot
Match: A0A352KFG1_9PROT (2-deoxy-D-gluconate 3-dehydrogenase n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A352KFG1_9PROT)

HSP 1 Score: 421 bits (1081), Expect = 2.640e-147
Identity = 210/256 (82.03%), Postives = 233/256 (91.02%), Query Frame = 1
Query:    1 MAYKGFDLGGKVALVTGGNGGIGLGMAQAMAEAGANIVIWGTNTEKNDAAKSALAGLGVKVLTSKVDVSQEQQVIDAFGQAVKEMGRVDTVIANAGIGFGAPSFMELKIETFRKVMNVNVEGAFFTLREAARHMVAREGGGSMVGVASLAAIEGAARNQAYGASKGALISMIKGISVELARYGVRANAILPGWIATDMTEASQASQKFNDNVIGRVPIRRWGQPEDFAGVAVYLASDASRYHTGDQFIIDGGYAIF 768
            MAY+GFDL GK ALVTGGNGGIGLGMA+AMA+AGANIVIWGTN EKN+AA+  L+ +GVK LTSKVDVSQE QVIDAFG+AV++MGR+DTVIANAGIGFGAPSFMELK++TFRKVM VN+EGAFFT REAARHM  REGGGS+VGVASLAA+EGAARNQAYGASKG LISM+KGI+VELARYG+RAN ILPGWIAT+MT  +QAS+KFNDNVIGRVPIRRWGQPEDF GVAVYLASDAS YH GD  +IDGGY  F
Sbjct:    1 MAYRGFDLSGKTALVTGGNGGIGLGMAEAMAQAGANIVIWGTNAEKNEAARGRLSAIGVKTLTSKVDVSQENQVIDAFGEAVRQMGRIDTVIANAGIGFGAPSFMELKLDTFRKVMGVNLEGAFFTFREAARHMTGREGGGSLVGVASLAAVEGAARNQAYGASKGGLISMVKGIAVELARYGIRANTILPGWIATEMTGDAQASKKFNDNVIGRVPIRRWGQPEDFGGVAVYLASDASAYHNGDTLVIDGGYLAF 256          
BLAST of mRNA_P-wetherbeei_contig10455.1.1 vs. uniprot
Match: A7HR54_PARL1 (Short-chain dehydrogenase/reductase SDR n=8 Tax=Alphaproteobacteria TaxID=28211 RepID=A7HR54_PARL1)

HSP 1 Score: 346 bits (887), Expect = 1.040e-117
Identity = 178/260 (68.46%), Postives = 209/260 (80.38%), Query Frame = 1
Query:    1 MAYKGFDLGGKVALVTGGNGGIGLGMAQAMAEAGANIVIWGTNTEKNDAAKSALAGLGVKVLTSKVDVSQEQQVIDAFGQAVKEMGRVDTVIANAGIGFGAPSFMELKIETFRKVMNVNVEGAFFTLREAARHMVAR----EGGGSMVGVASLAAIEGAARNQAYGASKGALISMIKGISVELARYGVRANAILPGWIATDMTEASQASQKFNDNVIGRVPIRRWGQPEDFAGVAVYLASDASRYHTGDQFIIDGGYAIF 768
            M+YK FDL GKVALVTGGNGGIGLGMA A+A++GA+I IWGTN +KN  A   L   GVKV T KVDVS E QV+D  G  VKE+GR+D+V ANAG+GFGAPSF+ +  ET+RK + VN++G FFTLREAARHMV R    + GGS+VG+ASLAAIEGAARN+AY A+KG +ISMIK I+VE ARYG+RANAILPGWIATDMT  +QA+  F + VI RVP RRWG+P DF GVAVYL SDAS YH+GD F+IDGGYAIF
Sbjct:    1 MSYKPFDLSGKVALVTGGNGGIGLGMADAIAQSGADIAIWGTNEDKNKRAAEQLRAHGVKVYTRKVDVSDEAQVVDGIGATVKELGRIDSVFANAGVGFGAPSFIGMTTETYRKTLAVNLDGVFFTLREAARHMVDRAKAGDAGGSLVGIASLAAIEGAARNEAYAATKGGVISMIKSIAVEHARYGMRANAILPGWIATDMTAQAQAAPAFAEKVIPRVPARRWGEPGDFGGVAVYLTSDASSYHSGDTFVIDGGYAIF 260          
BLAST of mRNA_P-wetherbeei_contig10455.1.1 vs. uniprot
Match: A0A328AY72_9CAUL (2-deoxy-D-gluconate 3-dehydrogenase n=1 Tax=Phenylobacterium hankyongense TaxID=1813876 RepID=A0A328AY72_9CAUL)

HSP 1 Score: 337 bits (865), Expect = 2.300e-114
Identity = 173/260 (66.54%), Postives = 210/260 (80.77%), Query Frame = 1
Query:    1 MAYKGFDLGGKVALVTGGNGGIGLGMAQAMAEAGANIVIWGTNTEKNDAAKSALAGLGVKVLTSKVDVSQEQQVIDAFGQAVKEMGRVDTVIANAGIGFGAPSFMELKIETFRKVMNVNVEGAFFTLREAARHMVAR----EGGGSMVGVASLAAIEGAARNQAYGASKGALISMIKGISVELARYGVRANAILPGWIATDMTEASQASQKFNDNVIGRVPIRRWGQPEDFAGVAVYLASDASRYHTGDQFIIDGGYAIF 768
            MAYK FDL GKVALVTGGNGGIGLGMA A+A+AGA++VIWGTN  KN AA+S L   G +VLT KVDV+ EQ VI+A   AV EMGR+DTVIANAG+G GA SF E+  E +R+VM+VN++G FFT REA RHMV R    + GGS+V  +S +AI GAARN+AYGA+K A++SM++ I+VE ARYGVRAN++LPGWIATDMT+ +Q + KFND VI RVP RRWG+PEDF G+AVYLASDASR+HTGD  ++DGGY IF
Sbjct:    1 MAYKPFDLTGKVALVTGGNGGIGLGMADALAQAGADLVIWGTNEAKNAAAESQLKAHGRRVLTRKVDVADEQAVIEAMRAAVAEMGRLDTVIANAGVGGGARSFSEMSTEVYRRVMSVNLDGVFFTFREACRHMVERAEAGDTGGSLVVTSSTSAIHGAARNEAYGATKAAVLSMVRAIAVEHARYGVRANSVLPGWIATDMTDGAQHNDKFNDQVIKRVPFRRWGEPEDFGGLAVYLASDASRFHTGDSLVVDGGYTIF 260          
BLAST of mRNA_P-wetherbeei_contig10455.1.1 vs. uniprot
Match: A0A257J1B0_9PROT (2-deoxy-D-gluconate 3-dehydrogenase n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A257J1B0_9PROT)

HSP 1 Score: 337 bits (863), Expect = 4.800e-114
Identity = 174/261 (66.67%), Postives = 209/261 (80.08%), Query Frame = 1
Query:    1 MAYKGFDLGGKVALVTGGNGGIGLGMAQAMAEAGANIVIWGTNTEKNDAAKSALAGLGVKVLTSKVDVSQEQQVIDAFGQAVKEMGRVDTVIANAGIGFGAPSFMELKIETFRKVMNVNVEGAFFTLREAARHMVAREG-----GGSMVGVASLAAIEGAARNQAYGASKGALISMIKGISVELARYGVRANAILPGWIATDMTEASQASQKFNDNVIGRVPIRRWGQPEDFAGVAVYLASDASRYHTGDQFIIDGGYAIF 768
            MAYK FDL GKVALVTGGNGGIG GMA+AMA+AGA++VIWG+N  KN  A+  L   GV+VLT  V+V+ E+ V     +AV +MGRVDTVIANAGIG GAPSF E   E +R+VM+VN++G FFT REA +HMVAR G     GGS+V ++SL+A++GA RN+AY A+KGA+ISMI+ I+VE ARYGVRANAILPGWIATDMT  +Q + KFNDNVI RVP+RRWGQP DF G+AVYLASDAS +HTGD F+IDGGY IF
Sbjct:    1 MAYKPFDLTGKVALVTGGNGGIGFGMAEAMAQAGADVVIWGSNPTKNADAEEKLKATGVRVLTQVVNVADEEAVRAGMVEAVNKMGRVDTVIANAGIGGGAPSFSEFSTEQYRRVMSVNLDGVFFTFREACKHMVARAGEGDRAGGSLVVISSLSALDGAPRNEAYAATKGAVISMIRAIAVEHARYGVRANAILPGWIATDMTAGAQGNDKFNDNVIKRVPVRRWGQPADFGGMAVYLASDASSFHTGDSFLIDGGYGIF 261          
BLAST of mRNA_P-wetherbeei_contig10455.1.1 vs. uniprot
Match: D5VHH4_CAUST (Short-chain dehydrogenase/reductase SDR n=18 Tax=Caulobacter TaxID=75 RepID=D5VHH4_CAUST)

HSP 1 Score: 335 bits (860), Expect = 1.320e-113
Identity = 174/260 (66.92%), Postives = 210/260 (80.77%), Query Frame = 1
Query:    1 MAYKGFDLGGKVALVTGGNGGIGLGMAQAMAEAGANIVIWGTNTEKNDAAKSALAGLGVKVLTSKVDVSQEQQVIDAFGQAVKEMGRVDTVIANAGIGFGAPSFMELKIETFRKVMNVNVEGAFFTLREAARHMVAR----EGGGSMVGVASLAAIEGAARNQAYGASKGALISMIKGISVELARYGVRANAILPGWIATDMTEASQASQKFNDNVIGRVPIRRWGQPEDFAGVAVYLASDASRYHTGDQFIIDGGYAIF 768
            MAY  F+L GKVALVTGGN GIGLGMA+AMA+AGA+IVIWG+N E+N AA+  L  LGV+V    VDVS E QV +   +AV  MGRVD+V ANAGIG+G+PSF+E+K E +RKV++VN++G FFTLREA RHMV R    + GGS+VG+ASLAAIEGAARN+AY A+KGA+ISMIK ++VE ARYGVRANAILPGWIATDMT  +Q +  F + VI RVP RRWG+PEDF G+AVYLASDAS YH+G   +IDGGY+IF
Sbjct:    1 MAYAPFNLSGKVALVTGGNRGIGLGMAKAMAQAGADIVIWGSNPERNLAAEQQLTSLGVRVKAQTVDVSDEVQVAEGMEEAVAAMGRVDSVFANAGIGYGSPSFVEMKTEVYRKVLSVNLDGVFFTLREACRHMVERAKAGDPGGSLVGIASLAAIEGAARNEAYAATKGAVISMIKSVAVEHARYGVRANAILPGWIATDMTAGAQGNSAFAEKVIPRVPARRWGEPEDFGGMAVYLASDASSYHSGTTIVIDGGYSIF 260          
BLAST of mRNA_P-wetherbeei_contig10455.1.1 vs. uniprot
Match: A0A2D7ZNE1_9CAUL (2-deoxy-D-gluconate 3-dehydrogenase n=1 Tax=Phenylobacterium sp. TaxID=1871053 RepID=A0A2D7ZNE1_9CAUL)

HSP 1 Score: 334 bits (857), Expect = 3.660e-113
Identity = 171/259 (66.02%), Postives = 208/259 (80.31%), Query Frame = 1
Query:    1 MAYKGFDLGGKVALVTGGNGGIGLGMAQAMAEAGANIVIWGTNTEKNDAAKSALAGLGVKVLTSKVDVSQEQQVIDAFGQAVKEMGRVDTVIANAGIGFGAPSFMELKIETFRKVMNVNVEGAFFTLREAARHMVAREG---GGSMVGVASLAAIEGAARNQAYGASKGALISMIKGISVELARYGVRANAILPGWIATDMTEASQASQKFNDNVIGRVPIRRWGQPEDFAGVAVYLASDASRYHTGDQFIIDGGYAIF 768
            MAYK FDL GKVALVTGGNGGIG GM +AMA+AGA+IVIWG+N +KN AA+  L   GV+VLT  V+V+ E  V D    AV +MG V TV+ANAGIG GA SF E   ET+RKV++VN++G FFT REA +HMVAR G   GGS+V ++SL+A++GAARNQAY A+KGALI M++ I+VE ARYGVRAN ILPGW+ATDMT A+Q + KFN+NVI RVP+RRWG+P DF G+AVYLASDASR+HTGD F+IDGGY +F
Sbjct:    1 MAYKPFDLTGKVALVTGGNGGIGFGMVEAMAQAGADIVIWGSNPDKNRAAEEKLKPTGVRVLTQVVNVADETAVADGMEAAVAQMGAVHTVVANAGIGGGAKSFSEFPTETYRKVLSVNLDGVFFTFREACKHMVARGGDGQGGSLVAISSLSALDGAARNQAYAATKGALIPMVRAIAVEHARYGVRANVILPGWVATDMTAAAQDNDKFNENVIKRVPMRRWGEPADFGGMAVYLASDASRFHTGDSFLIDGGYGVF 259          
BLAST of mRNA_P-wetherbeei_contig10455.1.1 vs. uniprot
Match: B0T042_CAUSK (Short-chain dehydrogenase/reductase SDR n=11 Tax=Bacteria TaxID=2 RepID=B0T042_CAUSK)

HSP 1 Score: 333 bits (853), Expect = 1.540e-112
Identity = 173/260 (66.54%), Postives = 209/260 (80.38%), Query Frame = 1
Query:    1 MAYKGFDLGGKVALVTGGNGGIGLGMAQAMAEAGANIVIWGTNTEKNDAAKSALAGLGVKVLTSKVDVSQEQQVIDAFGQAVKEMGRVDTVIANAGIGFGAPSFMELKIETFRKVMNVNVEGAFFTLREAARHMVAR----EGGGSMVGVASLAAIEGAARNQAYGASKGALISMIKGISVELARYGVRANAILPGWIATDMTEASQASQKFNDNVIGRVPIRRWGQPEDFAGVAVYLASDASRYHTGDQFIIDGGYAIF 768
            MAY+ FDL G+VAL+TGGN GIGLGMA A+A+AGA+IVIWG+N E+N AA+  L   GV+V    VDVSQE QV +   +AV  MGRVD+V ANAG+G+GAPSF+E+K ET+RK + VN++G FFT REA RHMV R    + GGS+VGVASLAAIEGAARNQAY A+KGA+ISM+K ++VE ARYGVRANAILPGWIATDMT+ +Q +  F + VI RVP RRWGQP DF G+AVYLASDAS YH+GD F+IDG Y+IF
Sbjct:    1 MAYQPFDLTGRVALITGGNRGIGLGMAAALAQAGADIVIWGSNGERNQAAEVELLKHGVRVKAQVVDVSQEDQVREGMEEAVAAMGRVDSVFANAGVGYGAPSFVEMKTETYRKTLAVNLDGVFFTFREACRHMVERAKAGDPGGSIVGVASLAAIEGAARNQAYAATKGAVISMMKSVAVEHARYGVRANAILPGWIATDMTQGAQDNPAFAEKVIPRVPARRWGQPADFGGIAVYLASDASSYHSGDTFVIDGAYSIF 260          
BLAST of mRNA_P-wetherbeei_contig10455.1.1 vs. uniprot
Match: A0A0P0NVR6_9CAUL (2-deoxy-D-gluconate 3-dehydrogenase n=5 Tax=Caulobacter TaxID=75 RepID=A0A0P0NVR6_9CAUL)

HSP 1 Score: 331 bits (848), Expect = 8.850e-112
Identity = 170/260 (65.38%), Postives = 210/260 (80.77%), Query Frame = 1
Query:    1 MAYKGFDLGGKVALVTGGNGGIGLGMAQAMAEAGANIVIWGTNTEKNDAAKSALAGLGVKVLTSKVDVSQEQQVIDAFGQAVKEMGRVDTVIANAGIGFGAPSFMELKIETFRKVMNVNVEGAFFTLREAARHMVAR----EGGGSMVGVASLAAIEGAARNQAYGASKGALISMIKGISVELARYGVRANAILPGWIATDMTEASQASQKFNDNVIGRVPIRRWGQPEDFAGVAVYLASDASRYHTGDQFIIDGGYAIF 768
            MAY  F+L GKVALVTGGN GIGLGMA A+A++GA+IVIWG+N E+N AA+  L   GV+V    VDVS E QV +A  +AV  MGR+D+V ANAG+GFG+PSF++++ ET+RK++ VN++G FFTLREA RHMV R    + GGS+VGVASLAAIEGAARN+AY A+KGA+ISMIK ++VE ARYGVRANAILPGWIATDMT  +Q++  F + VI RVP RRWG+P DF G+AVYLASDAS YH+GD  +IDGGY+IF
Sbjct:    1 MAYAPFNLAGKVALVTGGNRGIGLGMATALAQSGADIVIWGSNAERNQAAEGELLKHGVRVKAQTVDVSDESQVAEAMVEAVTAMGRIDSVFANAGVGFGSPSFVDMQTETYRKILAVNLDGVFFTLREACRHMVDRAKSGDPGGSLVGVASLAAIEGAARNEAYAATKGAVISMIKSVAVEHARYGVRANAILPGWIATDMTAGAQSAPAFAEKVIPRVPARRWGEPADFGGMAVYLASDASSYHSGDTLVIDGGYSIF 260          
BLAST of mRNA_P-wetherbeei_contig10455.1.1 vs. uniprot
Match: A0A7Y4T6A5_9PROT (SDR family oxidoreductase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A7Y4T6A5_9PROT)

HSP 1 Score: 331 bits (848), Expect = 8.850e-112
Identity = 173/260 (66.54%), Postives = 205/260 (78.85%), Query Frame = 1
Query:    1 MAYKGFDLGGKVALVTGGNGGIGLGMAQAMAEAGANIVIWGTNTEKNDAAKSALAGLGVKVLTSKVDVSQEQQVIDAFGQAVKEMGRVDTVIANAGIGFGAPSFMELKIETFRKVMNVNVEGAFFTLREAARHMVAR----EGGGSMVGVASLAAIEGAARNQAYGASKGALISMIKGISVELARYGVRANAILPGWIATDMTEASQASQKFNDNVIGRVPIRRWGQPEDFAGVAVYLASDASRYHTGDQFIIDGGYAIF 768
            M YK FDL GKVALVTGGNGGIGLGMAQA+A+AGA+I IWGTN +KN AA++AL   G +VL   VDV+ E QV++     + ++GRVDTVIANAGIG G+ SF+++ IE FRKV++VN EGAF TLREAARHM  R    + GGS+  VASLAAIEGAARNQ Y A+KGA++SM++ I+VE  R GVRANAILPGWIATDMT  +Q S  F D VI RVP RRWGQP DF G+AVYLASDAS YH+GD F+IDGGYA+F
Sbjct:    1 MGYKPFDLTGKVALVTGGNGGIGLGMAQALADAGADIAIWGTNADKNCAAEAALKASGRRVLAQTVDVANELQVVEGMKTVIDKLGRVDTVIANAGIGIGSRSFLDITIEQFRKVVSVNQEGAFLTLREAARHMRDRASKGDAGGSLAVVASLAAIEGAARNQHYAATKGAVVSMMRAIAVEFGRDGVRANAILPGWIATDMTAMAQTSSNFTDKVISRVPSRRWGQPADFGGIAVYLASDASAYHSGDTFVIDGGYAVF 260          
BLAST of mRNA_P-wetherbeei_contig10455.1.1 vs. uniprot
Match: A0A2A5ELG1_9HYPH (2-deoxy-D-gluconate 3-dehydrogenase n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2A5ELG1_9HYPH)

HSP 1 Score: 330 bits (846), Expect = 1.780e-111
Identity = 169/260 (65.00%), Postives = 207/260 (79.62%), Query Frame = 1
Query:    1 MAYKGFDLGGKVALVTGGNGGIGLGMAQAMAEAGANIVIWGTNTEKNDAAKSALAGLGVKVLTSKVDVSQEQQVIDAFGQAVKEMGRVDTVIANAGIGFGAPSFMELKIETFRKVMNVNVEGAFFTLREAARHMVAR----EGGGSMVGVASLAAIEGAARNQAYGASKGALISMIKGISVELARYGVRANAILPGWIATDMTEASQASQKFNDNVIGRVPIRRWGQPEDFAGVAVYLASDASRYHTGDQFIIDGGYAIF 768
            M YK FDL GKVALVTGGNGGIGLGMA A+A  GA++ IWGTN +KN  A  +L   G +V   KVDVS EQ+VID     V E+GR+D V+ANAG+GFG+PSF+++K ET+RK+++VN++G F+TLREA+RHMV R    + GGS+VGVASLAAIEGAARNQAY A+KGA+ISMIK  +VE  R+ +RANAILPGWIATDMT  +QA+  F++ VI RVPIRRWG+PEDF G+AVYLASDAS Y +G   IIDGGY+IF
Sbjct:    1 MTYKPFDLTGKVALVTGGNGGIGLGMADALAACGADVAIWGTNEDKNAKAAESLKAHGRRVYVRKVDVSNEQEVIDGIDATVAELGRIDNVVANAGVGFGSPSFVDMKTETYRKILSVNLDGVFWTLREASRHMVERSKNGDSGGSLVGVASLAAIEGAARNQAYAATKGAVISMIKACAVEYGRHKIRANAILPGWIATDMTAQAQAAPAFSEKVIPRVPIRRWGEPEDFGGMAVYLASDASAYTSGTTMIIDGGYSIF 260          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10455.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A352KFG1_9PROT2.640e-14782.032-deoxy-D-gluconate 3-dehydrogenase n=2 Tax=Alphap... [more]
A7HR54_PARL11.040e-11768.46Short-chain dehydrogenase/reductase SDR n=8 Tax=Al... [more]
A0A328AY72_9CAUL2.300e-11466.542-deoxy-D-gluconate 3-dehydrogenase n=1 Tax=Phenyl... [more]
A0A257J1B0_9PROT4.800e-11466.672-deoxy-D-gluconate 3-dehydrogenase n=3 Tax=Alphap... [more]
D5VHH4_CAUST1.320e-11366.92Short-chain dehydrogenase/reductase SDR n=18 Tax=C... [more]
A0A2D7ZNE1_9CAUL3.660e-11366.022-deoxy-D-gluconate 3-dehydrogenase n=1 Tax=Phenyl... [more]
B0T042_CAUSK1.540e-11266.54Short-chain dehydrogenase/reductase SDR n=11 Tax=B... [more]
A0A0P0NVR6_9CAUL8.850e-11265.382-deoxy-D-gluconate 3-dehydrogenase n=5 Tax=Caulob... [more]
A0A7Y4T6A5_9PROT8.850e-11266.54SDR family oxidoreductase n=1 Tax=Alphaproteobacte... [more]
A0A2A5ELG1_9HYPH1.780e-11165.002-deoxy-D-gluconate 3-dehydrogenase n=1 Tax=Rhodob... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10455contigP-wetherbeei_contig10455:687..1457 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog402881.Plav_0764
Preferred nameMA20_16385
PFAMsadh_short_C2
Model size771
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K00046
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.7e-118
EggNOG OGsCOG1028@1|root,COG1028@2|Bacteria,1MWGK@1224|Proteobacteria,2TVQ8@28211|Alphaproteobacteria
EC1.1.1.69
DescriptionCOG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Cds size771
COG categoryIQ
BRITEko00000,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185870.108924-CDS-P-wetherbeei_contig10455:686..14571683185870.108924-CDS-P-wetherbeei_contig10455:686..1457Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10455 687..1457 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10455.1.1prot_P-wetherbeei_contig10455.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig10455 687..1457 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig10455.1.1

>prot_P-wetherbeei_contig10455.1.1 ID=prot_P-wetherbeei_contig10455.1.1|Name=mRNA_P-wetherbeei_contig10455.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=257bp
MAYKGFDLGGKVALVTGGNGGIGLGMAQAMAEAGANIVIWGTNTEKNDAA
KSALAGLGVKVLTSKVDVSQEQQVIDAFGQAVKEMGRVDTVIANAGIGFG
APSFMELKIETFRKVMNVNVEGAFFTLREAARHMVAREGGGSMVGVASLA
AIEGAARNQAYGASKGALISMIKGISVELARYGVRANAILPGWIATDMTE
ASQASQKFNDNVIGRVPIRRWGQPEDFAGVAVYLASDASRYHTGDQFIID
GGYAIF*
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mRNA from alignment at P-wetherbeei_contig10455:687..1457-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig10455.1.1 ID=mRNA_P-wetherbeei_contig10455.1.1|Name=mRNA_P-wetherbeei_contig10455.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=771bp|location=Sequence derived from alignment at P-wetherbeei_contig10455:687..1457- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCCTATAAGGGATTTGATCTAGGCGGCAAGGTCGCGCTGGTAACCGG CGGCAATGGCGGCATCGGCCTTGGCATGGCCCAGGCCATGGCCGAAGCGG GCGCCAATATTGTCATCTGGGGCACCAATACAGAAAAAAACGACGCCGCA AAGTCCGCGCTTGCCGGGCTTGGGGTAAAGGTGCTGACGTCAAAGGTAGA CGTTTCCCAGGAGCAACAGGTCATTGACGCCTTTGGCCAGGCCGTCAAGG AAATGGGCCGCGTTGACACCGTGATCGCCAATGCGGGCATTGGCTTTGGC GCGCCCTCCTTCATGGAACTGAAAATCGAAACCTTCCGCAAGGTGATGAA TGTCAATGTGGAAGGGGCGTTCTTCACCCTGCGGGAGGCCGCCCGGCACA TGGTCGCCCGGGAAGGAGGCGGTTCCATGGTGGGGGTTGCCAGCCTTGCC GCTATCGAAGGTGCGGCGCGCAATCAGGCCTATGGGGCCAGCAAGGGGGC CCTGATTTCCATGATCAAGGGCATCTCGGTCGAGCTTGCCCGCTATGGCG TGCGGGCCAATGCGATTTTACCAGGCTGGATTGCCACCGACATGACCGAA GCTTCGCAGGCCTCACAGAAATTTAACGATAATGTCATTGGCCGGGTGCC AATCCGGCGCTGGGGCCAGCCGGAAGATTTTGCAGGCGTGGCCGTCTATC TGGCCAGCGACGCCTCGCGCTATCATACCGGCGATCAGTTCATCATAGAC GGCGGTTACGCCATCTTCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig10455:687..1457-

>mRNA_P-wetherbeei_contig10455.1.1 ID=mRNA_P-wetherbeei_contig10455.1.1|Name=mRNA_P-wetherbeei_contig10455.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=771bp|location=Sequence derived from alignment at P-wetherbeei_contig10455:687..1457- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCCTATAAGGGATTTGATCTAGGCGGCAAGGTCGCGCTGGTAACCGG
CGGCAATGGCGGCATCGGCCTTGGCATGGCCCAGGCCATGGCCGAAGCGG
GCGCCAATATTGTCATCTGGGGCACCAATACAGAAAAAAACGACGCCGCA
AAGTCCGCGCTTGCCGGGCTTGGGGTAAAGGTGCTGACGTCAAAGGTAGA
CGTTTCCCAGGAGCAACAGGTCATTGACGCCTTTGGCCAGGCCGTCAAGG
AAATGGGCCGCGTTGACACCGTGATCGCCAATGCGGGCATTGGCTTTGGC
GCGCCCTCCTTCATGGAACTGAAAATCGAAACCTTCCGCAAGGTGATGAA
TGTCAATGTGGAAGGGGCGTTCTTCACCCTGCGGGAGGCCGCCCGGCACA
TGGTCGCCCGGGAAGGAGGCGGTTCCATGGTGGGGGTTGCCAGCCTTGCC
GCTATCGAAGGTGCGGCGCGCAATCAGGCCTATGGGGCCAGCAAGGGGGC
CCTGATTTCCATGATCAAGGGCATCTCGGTCGAGCTTGCCCGCTATGGCG
TGCGGGCCAATGCGATTTTACCAGGCTGGATTGCCACCGACATGACCGAA
GCTTCGCAGGCCTCACAGAAATTTAACGATAATGTCATTGGCCGGGTGCC
AATCCGGCGCTGGGGCCAGCCGGAAGATTTTGCAGGCGTGGCCGTCTATC
TGGCCAGCGACGCCTCGCGCTATCATACCGGCGATCAGTTCATCATAGAC
GGCGGTTACGCCATCTTCTGA
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