mRNA_P-wetherbeei_contig10440.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig10440.1.1 vs. uniprot
Match: D8LLX0_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLX0_ECTSI) HSP 1 Score: 269 bits (688), Expect = 3.080e-79 Identity = 139/236 (58.90%), Postives = 173/236 (73.31%), Query Frame = 1 Query: 34 YASLPLDAVKAGTKTTENALLVQLKARYTIRRITIRAHEAHGRFVKRINVWYHVRAVASLAELKMPENVAKWRRAASVVVPRERSVAQIDLPLPLVAANLMFEFAEFHADPA------SAAGXXXXXXXSKAGATLHCPRCGRPVTDMHGVCRQCGEVAFQCRQCRHINYESLDAFLCAECGYCAYAQFSYRLTAFKTAGATAVTSEAELAAATALLADANAAVQSLREEVEDLRP 723 Y + PLD++KA +K+TENA+LVQLK R+ ++R+ +R +AHGR V+ I + YH + VA++A+L+MPEN AKWR AA+V VPR++ Q+DLPLPL ANLM EFA+FHADPA +A G S GA LHCPRCGRPVTDMHGVCRQCGEVAFQC QCRHINYESL+AFLC ECGYCAYA FS+RL A T VT+EAELA A L +++++E+E LRP Sbjct: 5195 YLNYPLDSIKAASKSTENAMLVQLKGRFKVQRLLVRIADAHGRLVRTIRLHYHSKPVATIADLRMPENAAKWRLAATVHVPRDKVSVQVDLPLPLTCANLMVEFADFHADPARGAEDPAAVGAGGRRGHSGGGA-LHCPRCGRPVTDMHGVCRQCGEVAFQCCQCRHINYESLEAFLCVECGYCAYAHFSFRLIAALETDFTPVTTEAELAEANRLADKRTQLARNVQQELERLRP 5429
BLAST of mRNA_P-wetherbeei_contig10440.1.1 vs. uniprot
Match: A0A6H5J981_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J981_9PHAE) HSP 1 Score: 254 bits (650), Expect = 3.930e-74 Identity = 134/235 (57.02%), Postives = 164/235 (69.79%), Query Frame = 1 Query: 34 YASLPLDAVKAGTKTTENALLVQLKARYTIRRITIRAHEAHGRFVKRINVWYHVRAVASLAELKMPENVAKWRRAASVVVPRERSVAQIDLPLPLVAANLMFEFAEFHADPAS-----AAGXXXXXXXSKAGATLHCPRCGRPVTDMHGVCRQCGEVAFQCRQCRHINYESLDAFLCAECGYCAYAQFSYRLTAFKTAGATAVTSEAELAAATALLADANAAVQSLREEVEDLRP 723 Y + PLD++KA +K+TENA+LVQLK R+ ++R+ +R +AHGR V+ I + YH + VA++A+L+MPEN AKWR AA+V +DLPLPL ANLM EFA+FHADPA AA G LHCPRCGRPVTDMHGVCRQCGEVAFQC QCRHINYESL+AFLC ECGYCAYA FS+RL A T VT+EAELA A L ++L++E+E LRP Sbjct: 5710 YLNYPLDSIKAASKSTENAMLVQLKGRFKVQRLLVRIADAHGRLVRTIRLHYHSKPVATIADLRMPENAAKWRLAATV---------HVDLPLPLTCANLMVEFADFHADPARGAEDPAAVGAGGRRGHGGGGALHCPRCGRPVTDMHGVCRQCGEVAFQCCQCRHINYESLEAFLCVECGYCAYAHFSFRLIAALETDFTPVTTEAELAEANRLADKRTQLARNLQQELERLRP 5935
BLAST of mRNA_P-wetherbeei_contig10440.1.1 vs. uniprot
Match: A0A835Z9Y3_9STRA (E3 ubiquitin-protein ligase UBR4-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Y3_9STRA) HSP 1 Score: 242 bits (618), Expect = 7.730e-70 Identity = 123/230 (53.48%), Postives = 160/230 (69.57%), Query Frame = 1 Query: 37 ASLPLDAVKAGTKTTENALLVQLKARYTIRRITIRAHEAHGRFVKRINVWYHVRAVASLAELKMPENVAKWRRAASVVVPRERSVAQIDLPLPLVAANLMFEFAEFHADPASAAGXXXXXXXSKAGATLHCPRCGRPVTDMHGVCRQCGEVAFQCRQCRHINYESLDAFLCAECGYCAYAQFSYRLTAFKTA-GATAVTSEAELAAATALLADANAAVQSLREEVEDLRP 723 A +PLD ++A +T+ENA+LVQLK RY IR++ +R HE HGRFVK INV+Y + V++LAEL+MPEN KW ++ + +++ Q++LPLPL+AANLMFE+AEFH A A L CPRCGRPVTDMHG+CRQCGEVAFQCRQCRHINYE LDAFLC ECGYCAY QFS+R+ A + G + +EAE A + A ++ R+++ +LRP Sbjct: 4135 AMVPLDTMRATFRTSENAMLVQLKGRYMIRKLALRVHEPHGRFVKLINVYYSPKKVSTLAELRMPENADKWHFCVAIPMEQDKLSVQVELPLPLLAANLMFEYAEFH--EGGDLDVVGARDRGAAAAGLLCPRCGRPVTDMHGICRQCGEVAFQCRQCRHINYERLDAFLCVECGYCAYGQFSFRVAATRAGVGCDVIATEAECKDAIKAVEACAARMEQARKQLHELRP 4362
BLAST of mRNA_P-wetherbeei_contig10440.1.1 vs. uniprot
Match: F0Y2R4_AURAN (UBR-type domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2R4_AURAN) HSP 1 Score: 195 bits (496), Expect = 1.820e-53 Identity = 107/233 (45.92%), Postives = 137/233 (58.80%), Query Frame = 1 Query: 49 LDAVKAGTKTTENALLVQLKARYTIRRITIRAHEAHGRFVKRINVWYHVRAVASLAELKMPENVAKWRRAASVVVPRERSVAQIDLPLPLVAANLMFEFAEFHADPASAAGXXXXXXX--------SKAGATLHCPRCGRPVTDMHGVCRQCGEVAFQCRQCRHINYESLDAFLCAECGYCAYAQFSYRLTAFKTAGATAVTSEAELAAATALLADANAAVQSLREEVEDLRP 723 L+ V+ G + TE+ + QL+ I I +R E GR+V+R+ VWY R V S+ EL +P N KW AA+ + R ++ +I LP PLVAANL+FE+ +F+ + G S++GA LHCPRCGR VTD HGVC+ CGEVAFQCRQCRHINYE LDAFLC ECGYCA+ F YRL + A A+ S EL AA L D + R + L P Sbjct: 4236 LEDVRKGARFTESCSIAQLRGVRRIHAIELRLREPRGRYVRRLRVWYVAREVDSIGELAVPANWPKWSVAATARLTRGQTSVKIPLPAPLVAANLLFEYEDFYPQRTTPGGGAPRGGDRGRAGASGSRSGACLHCPRCGRAVTDAHGVCQHCGEVAFQCRQCRHINYERLDAFLCVECGYCAFGDFGYRLRSEAAPDALAIASAEELEAARRRLQDRADVCRDTRATLRRLLP 4468
BLAST of mRNA_P-wetherbeei_contig10440.1.1 vs. uniprot
Match: A0A8J2S518_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S518_9STRA) HSP 1 Score: 189 bits (479), Expect = 3.450e-51 Identity = 110/229 (48.03%), Postives = 140/229 (61.14%), Query Frame = 1 Query: 49 LDAVKAGTKTTENALLVQLKARYTIRRIT---IRAHEAHGRFVKRINVWYHVRAVASLAELKMPENVAKWRRAASVVVPRERSVAQIDLPLPLVAANLMFEFAEFHADPASAAGXXXXXXX-SKAGATLHCPRCGRPVTDMHGVCRQCGEVAFQCRQCRHINYESLDAFLCAECGYCAYAQFSYRLTAFKTAGATAVTSEAELAAATALLADANAAVQSLREEVEDLRP 723 L+ ++ + TEN L QL+ T+RRIT +R E GR+V+R+ + Y R V SL++L P + KW AA+V + R ++ A+I LP PLVAANL+ E+ +F+ P G SK LHCPRCGR VTD HGVC+ CGEVAFQCRQCRHINYE LDAFLC ECGYCA+ FSYRL + A ++ SE +L A A L D A R E+ L P Sbjct: 3848 LEDLRKAARYTENTALSQLR---TVRRITHLELRIREPRGRYVRRLKLHYAAREVDSLSDLSWPTHRRKWALAATVRLERGQTSARIPLPAPLVAANLLIEYDDFY--PQRTTGPPQQRRTGSKTQPCLHCPRCGRAVTDAHGVCQHCGEVAFQCRQCRHINYERLDAFLCVECGYCAFGDFSYRLRSDPAPDALSIRSEEDLQRAVARLRDRADACADARRELRRLLP 4071
BLAST of mRNA_P-wetherbeei_contig10440.1.1 vs. uniprot
Match: A0A7S2EA45_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EA45_9STRA) HSP 1 Score: 155 bits (392), Expect = 1.440e-39 Identity = 89/211 (42.18%), Postives = 120/211 (56.87%), Query Frame = 1 Query: 34 YASLPLDAVKAGTKTTENALLVQLKARYTIRRITIRAHEAHGRFVKRINVWYHVRAVASLAELKMPENVAKWRRAASVVVPRERSVAQIDLPLPLVAANLMFEFAEFHADPASAAGXXXXXXXSKAGATLHCPRCGRPVTDMHGVCRQCGEVAFQCRQCRHINYESLDAFLCAECGYCAYAQFSYRLTAFKTAGATAVTSEAELAAATALL 666 Y+ L+A A +TE A +QLK R I +I + + GR VK+I V++ R V+ + ELK E W+R ++ + R + A L P++AANL FEF EF+ + + G LHCPRC R V + HGVC CGEVAFQCR+CRHINY+ LDAFLC ECGYCA FS+ +TA + A+ E + A +LL Sbjct: 1153 YSRSALEASTANVVSTEFASHLQLKLRMAISQIHLSVTDPRGRLVKKIGVFFSPRQVSDVQELKAEEYNEIWQRCGTMSLARGAAQASCKLVTPVIAANLKFEFMEFYEKVGGSRS-------ADGGLLLHCPRCTRVVNNAHGVCGNCGEVAFQCRKCRHINYDRLDAFLCIECGYCASGSFSFEVTAGVALNSIAIIDEEGVERAVSLL 1356
BLAST of mRNA_P-wetherbeei_contig10440.1.1 vs. uniprot
Match: A0A7S0UG02_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UG02_9STRA) HSP 1 Score: 153 bits (386), Expect = 4.260e-39 Identity = 83/198 (41.92%), Postives = 114/198 (57.58%), Query Frame = 1 Query: 34 YASLPLDAVKAGTKTTENALLVQLKARYTIRRITIRAHEAHGRFVKRINVWYHVRAVASLAELKMPENVAKWRRAASVVVPRERSVAQIDLPLPLVAANLMFEFAEFHADPASAAGXXXXXXXSKAGATLHCPRCGRPVTDMHGVCRQCGEVAFQCRQCRHINYESLDAFLCAECGYCAYAQFSYRLTAFKTAGATAV 627 Y+ L+ +K + E + +LK R +I I + + GR+VK I+V++ R ++ LK +KW+ A++ +PR S A + LP P+VAAN+ EF +F+ P K G LHCPRC RPVT+ HGVC CGEVAFQCR+CRHINY+ LDAFLC ECGY FS+ L + ATA+ Sbjct: 342 YSRCRLEGLKESCTSNEFSRFYKLKHRLSISDIHLTVSDPRGRYVKTISVFFTPRHLSG--SLKSDRYTSKWQIIATLNLPRGGSKASVSLPQPIVAANIRVEFTDFYERPGD---------KEKGGMVLHCPRCTRPVTNAHGVCVTCGEVAFQCRKCRHINYDRLDAFLCVECGYTCCGSFSFELNSAVVTNATAI 528
BLAST of mRNA_P-wetherbeei_contig10440.1.1 vs. uniprot
Match: A0A7S3Q419_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q419_9STRA) HSP 1 Score: 153 bits (387), Expect = 7.090e-39 Identity = 88/193 (45.60%), Postives = 111/193 (57.51%), Query Frame = 1 Query: 70 TKTTENALLVQLKARYTIRRITIRAHEAHGRFVKRINVWYHVRAVASLAELKMPENVAKWRRAASVVVPRERSVAQIDLPLPLVAANLMFEFAEFHADPASAAGXXXXXXXSKAGATLHCPRCGRPVTDMHG-VCRQCGEVAFQCRQCRHINYESLDAFLCAECGYCAYAQFSYRLTAFKTAGATAVTSEAEL 645 T +TE + +QLK+R I ITI+ + GRFVK I V++ R V ++ELK E W+R + +PR + A LP +VAANL FE+ +F S LHCPRC R V + HG VC CGEVAFQCR+CRHINY+ LDAFLC ECGYC+ FSY L A A A+ SE +L Sbjct: 2769 TVSTEFSSYLQLKSRLAISEITIKISDQRGRFVKNIAVYFSPRPVNGVSELKDSEIGPVWQRCGTFSLPRGTNSASCKLPPDVVAANLKFEYIDFWEK-------ITGPRTSSGAMVLHCPRCTRVVNNAHGGVCGHCGEVAFQCRKCRHINYDRLDAFLCVECGYCSSGSFSYELQAGGATSAVAILSEDDL 2954
BLAST of mRNA_P-wetherbeei_contig10440.1.1 vs. uniprot
Match: A0A7N1A599_KALFE (Uncharacterized protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N1A599_KALFE) HSP 1 Score: 152 bits (385), Expect = 1.340e-38 Identity = 79/193 (40.93%), Postives = 118/193 (61.14%), Query Frame = 1 Query: 25 EAAYASLPLDAVKAGTKTTENALLVQLKARYTIRRITIRAHEAH-GRFVKRINVWYHVRAVASLAELKMPENVAKWRRAASVVVPRERSVAQIDLPLPLVAANLMFEFAEFHADPASAAGXXXXXXXSKAGATLHCPRCGRPVTDMHGVCRQCGEVAFQCRQCRHINYESLDAFLCAECGYCAYAQFSYRLTA 600 E Y+ + L+++K+ TK T+N +LV+ YTI+ +T+ H+A + VK +N++Y+ R VA L+ELK N + W+RA S V+ ++ ++D P+P+ A N M E F+ + + + L CPRC RPVTD HG+C C E A+QCRQCR+INYE+LD+FLC ECGY Y +F + A Sbjct: 3287 EVPYSKMKLESLKSETKFTDNRILVKCTGSYTIQTVTMNVHDARKSKSVKVLNLYYNNRPVADLSELK--NNWSLWKRAKSCVLVFNQTELKVDFPIPITACNFMIELDSFYEN-----------LQALSLEPLQCPRCSRPVTDKHGICSNCRENAYQCRQCRNINYENLDSFLCNECGYSKYGRFEFNFMA 3466
BLAST of mRNA_P-wetherbeei_contig10440.1.1 vs. uniprot
Match: A0A803QKK5_CANSA (Uncharacterized protein n=3 Tax=Cannabis sativa TaxID=3483 RepID=A0A803QKK5_CANSA) HSP 1 Score: 152 bits (385), Expect = 1.340e-38 Identity = 78/193 (40.41%), Postives = 118/193 (61.14%), Query Frame = 1 Query: 25 EAAYASLPLDAVKAGTKTTENALLVQLKARYTIRRITIRAHEAH-GRFVKRINVWYHVRAVASLAELKMPENVAKWRRAASVVVPRERSVAQIDLPLPLVAANLMFEFAEFHADPASAAGXXXXXXXSKAGATLHCPRCGRPVTDMHGVCRQCGEVAFQCRQCRHINYESLDAFLCAECGYCAYAQFSYRLTA 600 E Y+ + L+++K+ TK T+N ++V+ YTI+ +T+ H+A + VK +N++Y+ R VA L+ELK N + W+RA S + ++ ++D P+P+ A N M E F+ + + + L CPRC RPVTD HG+C C E A+QCRQCR+INYE+LD+FLC ECGYC Y +F + A Sbjct: 3318 EVPYSRMKLESLKSETKFTDNRIIVKCTGSYTIQTVTMNVHDARKSKSVKVLNLYYNNRPVADLSELK--NNWSLWKRAKSCHLAFNQTELKVDFPIPITACNFMIELDSFYEN-----------LQALSLEPLQCPRCSRPVTDKHGICGNCHENAYQCRQCRNINYENLDSFLCNECGYCKYGRFEFNFMA 3497 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10440.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig10440.1.1 >prot_P-wetherbeei_contig10440.1.1 ID=prot_P-wetherbeei_contig10440.1.1|Name=mRNA_P-wetherbeei_contig10440.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=241bp VASSAAAEEAAYASLPLDAVKAGTKTTENALLVQLKARYTIRRITIRAHEback to top mRNA from alignment at P-wetherbeei_contig10440:314..1393- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig10440.1.1 ID=mRNA_P-wetherbeei_contig10440.1.1|Name=mRNA_P-wetherbeei_contig10440.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1080bp|location=Sequence derived from alignment at P-wetherbeei_contig10440:314..1393- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig10440:314..1393- >mRNA_P-wetherbeei_contig10440.1.1 ID=mRNA_P-wetherbeei_contig10440.1.1|Name=mRNA_P-wetherbeei_contig10440.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=723bp|location=Sequence derived from alignment at P-wetherbeei_contig10440:314..1393- (Phaeothamnion wetherbeei SAG_119_79)back to top |