mRNA_P-wetherbeei_contig10433.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig10433.4.1
Unique NamemRNA_P-wetherbeei_contig10433.4.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig10433.4.1 vs. uniprot
Match: A0A7V7XQ10_9RHOO (Uncharacterized protein n=2 Tax=Rhodocyclaceae bacterium TaxID=1898103 RepID=A0A7V7XQ10_9RHOO)

HSP 1 Score: 211 bits (537), Expect = 4.750e-62
Identity = 141/323 (43.65%), Postives = 191/323 (59.13%), Query Frame = 1
Query:    1 QRGMSMMELMVGLAIGMILTLGMFTMIVSTSQSFRVNDDFSRMQENAASAFRYLSDSLRQAGFYGNAMDTSKIAFVAGSAVATTTDCGSASVAPATNFALDFATPIRAYMNTTDPALLISPLTVNANFPCILQANFSAGPAGIANPNPILVTRGASGFRICWAIVAAVANVSPACSNTPSLLAN---QPNSATTIYVQSDPYQG---LVFYGTDYATLRGGATARKYP--NGI-----DMEMFEYRAHVYYVRPCSRPAGGAVNCTGAA-DDGGHPIPTLVRQELVGSAMTEVPLVEGIDLIDYRFGVDSSNPADGVADFYTG 927
            Q G+S++ELMVGLAIG++L+LG+  M+  TS++F+V DDF+R+QEN A A RYL D +R AGFYG A     I     +A+A   DCG+A  AP    AL+   PI +  NT  PA      +V A +PCI   NF +G       +P++  RGA G+R+ W             +N  +LL +   +PN A TIYVQS P Q    ++F G+ YA LR     R Y   +G+     +  +FEY++HVYY+RPCSRP   A +C+ A  DDGG  IPTLVR ELVG+AM   PLVEG++ +   +GVD +   DG+ D YTG
Sbjct:   24 QAGLSLVELMVGLAIGLVLSLGLVVMLSGTSRNFKVQDDFARLQENGALALRYLLDDVRTAGFYGWAASVGSIDPTLRAAIAIANDCGAAVNAPGA--ALNMELPI-SVDNTLTPA------SVAAAYPCITGNNFLSG-------SPVIALRGAPGYRV-WDR-----------NNNDNLLDDLTAEPNFANTIYVQSSPAQDPNTIIFQGSGYAALRASGQHRAYTPSSGVVCALCEGPVFEYQSHVYYIRPCSRPTPPATDCSPAGTDDGGRSIPTLVRHELVGTAMQLTPLVEGVERLTLLYGVDDNQ--DGIPDRYTG 316          
BLAST of mRNA_P-wetherbeei_contig10433.4.1 vs. uniprot
Match: A0A809R1T4_9PROT (Type IV pilus-assembly protein pilW n=1 Tax=Candidatus Desulfobacillus denitrificans TaxID=2608985 RepID=A0A809R1T4_9PROT)

HSP 1 Score: 205 bits (521), Expect = 9.810e-60
Identity = 137/317 (43.22%), Postives = 181/317 (57.10%), Query Frame = 1
Query:    7 GMSMMELMVGLAIGMILTLGMFTMIVSTSQSFRVNDDFSRMQENAASAFRYLSDSLRQAGFYGNAMDTSKIAFVAGSAVATTTDCGSASVAPATNFALDFATPIRAYMNTTDPALLISPLTVNANFPCILQANFSAGPAGIANPNPILVTRGASGFRICWAIVAAVANVSPACSNTPSLLANQPNSATTIYVQSDPYQG---LVFYGTDYATLRGGATARKYPNGIDM-------EMFEYRAHVYYVRPCSRPAGGAVNCTGAA-DDGGHPIPTLVRQELVGSAMTEVPLVEGIDLIDYRFGVDSSNPADGVADFYT 924
            G+S++ELMV LAIG++++LG+  M+  TS++F+V DDF+R+QEN A A RYL D +R AGFYG A     I     S +A + DCG+A  AP    AL+   PI +  NT  PA       V A +PCI   NF  G       +P++  RGA G+R+ W              N    L  +PN A+TIYVQS P Q    ++F G++YA LR     R Y  G  +        MFEY+AHVYY+RPCSRP   A +C+ A  DDGG  IPTLVR EL G++M   PLVEGI+ +   +GVD +   DG+ D YT
Sbjct:   20 GLSLVELMVSLAIGLVISLGLVVMLSGTSRNFKVQDDFARLQENGALAMRYLLDDVRVAGFYGWASSVGSIDTALRSTIAISNDCGAAVTAPGA--ALNMELPI-SVDNTRTPA------NVAAAYPCITGNNFMNG-------SPVIALRGAPGYRV-WD--------RNGNDNLLDDLTAEPNYASTIYVQSSPAQEPNTIIFRGSNYAALRAAGQHRAYTPGSGVVCALCEGPMFEYQAHVYYLRPCSRPTPPATDCSPAGTDDGGRSIPTLVRHELAGTSMQLTPLVEGIERLTLLYGVDDNQ--DGIPDRYT 309          
BLAST of mRNA_P-wetherbeei_contig10433.4.1 vs. uniprot
Match: A0A1J5S6E5_9ZZZZ (Uncharacterized protein n=1 Tax=mine drainage metagenome TaxID=410659 RepID=A0A1J5S6E5_9ZZZZ)

HSP 1 Score: 204 bits (518), Expect = 3.210e-59
Identity = 134/332 (40.36%), Postives = 190/332 (57.23%), Query Frame = 1
Query:    7 GMSMMELMVGLAIGMILTLGMFTMIVSTSQSFRVNDDFSRMQENAASAFRYLSDSLRQAGFYGNAMDTSKIAFVAGSAVATTTDCGSASVAP-ATNFALDFATPIRAYMNTTDPALLISPLTVNANFPCILQANFSAGPAGIANPNPILVTRGASGFRICWAIVAAVANVSPACSNTPSLLANQPNSATTIYVQSDPYQG---LVFYGTDYATLRGGA--TARKYPNGIDMEMFEYRAHVYYVRPCSRPAGGAVN---CTGAADDGGHPIPTLVRQELVGSAMT----EVPLVEGIDLIDYRFGVDSSNPADGVADFYTGTIVTPSQWAQVV 963
            G++++ELMV +AIG++L  G+  +  +TS SFRV D F+R+QEN  +A RYLSD +R AGFYG +   + +      + A   DCG+    P A  +ALD A P+  Y         ++P TV++ FPCI   NFS G       +P++V RGA+G  I         +   A  N  + LA QPN   T+Y+QS P Q    +VF G +YA LR  +    R   +  D  +F Y+ HVYY+RPCSRP GG+     C  A DDGG PIPTLVRQE+  +A T    EV LVEGI+ +++ +G+D++   DG+ D Y+    + S+W QV+
Sbjct:   20 GVTLIELMVSMAIGLVLLTGLTVLFSNTSTSFRVQDAFARLQENGTAALRYLSDDIRMAGFYGESTSAASVKLDNLPSFAAAADCGAELPGPPARPYALDLAVPVEVYGEGD-----LTPATVSSTFPCITADNFSPG-------SPVIVLRGATGQVI---------DQPDANGNMSAALAAQPNYDKTLYLQSSPTQDPNTIVFRGDNYAALRDASPGNVRMLASNKDAPIFAYQVHVYYLRPCSRPTGGSAEKPVCR-ADDDGGRPIPTLVRQEISSTAATQQMQEVALVEGIERLNFSYGLDTNG--DGIPDRYSAA-PSASEWPQVI 326          
BLAST of mRNA_P-wetherbeei_contig10433.4.1 vs. uniprot
Match: A0A1A8XGJ4_9PROT (Tfp pilus assembly protein PilW-like protein n=1 Tax=Candidatus Accumulibacter aalborgensis TaxID=1860102 RepID=A0A1A8XGJ4_9PROT)

HSP 1 Score: 185 bits (469), Expect = 3.210e-52
Identity = 127/321 (39.56%), Postives = 181/321 (56.39%), Query Frame = 1
Query:    1 QRGMSMMELMVGLAIGMILTLGMFTMIVSTSQSFRVNDDFSRMQENAASAFRYLSDSLRQAGFYGNAMDTSKIAFVAGSAVATTTDCGSASVAPATNFALDFATPIRAYMNTTDPALLISPLTVNANFPCILQANFSAGPAGIANPNPILVTRGASGFRICWAIVAAVANVSPACSNTPSLLANQPNSATTIYVQSDPYQGLVFYGTDYATLRGGATARKYPNGIDMEMFEYRAHVYYVRPCSRPAGGAVNCTGAADDGGHPIPTLVRQELVGSAMTEVPLVEGIDLIDYRFGVDSSNPADGVADFYTGTIVTPSQWAQVV 963
            QRG++++E+MV + IG+IL L M +++V++++ F+V+DDF+RMQEN A A   +   LR AGFYG A  T+ I  +     A   +CG+        +A +FA P+     + DPAL  +    +A  PCI QANF    A    P+ ILV RGA+G ++      A AN+                 A T+YVQ+D   G++F G+ YA   G    R    G +  ++ Y+A  YY+RPCSRP G       A DDG  P+PTLVRQELVG+AMTEV + EGI+ I   +G+D+  P +G    YT T  T +++AQVV
Sbjct:   18 QRGLTLVEVMVAMTIGIILLLAMGSLLVNSTRVFKVSDDFARMQENGAYALNSIGSDLRMAGFYG-ATTTNDIQAL----TAVGEECGA-------GWATNFAQPLLGLPLSGDPALTST--AAHAAMPCINQANFIGSAAD--RPSFILVVRGATGVQV------APANL----------------DANTLYVQADSNGGMLFKGSQYAGF-GTPPRRTVLGGAEAPIYAYQAKAYYLRPCSRPTGTGDTVCLATDDGNQPVPTLVRQELVGAAMTEVAVAEGIEAIRISYGIDTHAPPNGTPGKYTET-PTLAEFAQVV 298          
BLAST of mRNA_P-wetherbeei_contig10433.4.1 vs. uniprot
Match: A0A080MK65_9PROT (Tfp pilus assembly protein PilW n=5 Tax=Candidatus Accumulibacter TaxID=327159 RepID=A0A080MK65_9PROT)

HSP 1 Score: 162 bits (411), Expect = 7.540e-44
Identity = 123/321 (38.32%), Postives = 169/321 (52.65%), Query Frame = 1
Query:    1 QRGMSMMELMVGLAIGMILTLGMFTMIVSTSQSFRVNDDFSRMQENAASAFRYLSDSLRQAGFYGNAMDTSKIAFVAGSAVATTTDCGSASVAPATNFALDFATPIRAYMNTTDPALLISPLTVNANFPCILQANFSAGPAGIANPNPILVTRGASGFRICWAIVAAVANVSPACSNTPSLLANQPNSATTIYVQSDPYQGLVFYGTDYATLRGGATARKYPNGIDMEMFEYRAHVYYVRPCSRPAGGAVNCTGAADDGGHPIPTLVRQELVGSAMTEVPLVEGIDLIDYRFGVDSSNPADGVADFYTGTIVTPSQWAQVV 963
            QRGM+++E+MV + IG+IL L +  +  ++++ F+VND+FSRMQEN A A   +   LR AGFYG+ M T+ +      A+A T DCG       TN+A++FA  +      TD           A   CI  ANF  G         ILV RGA+G  +            PA  N           A T+YVQSDP  G++F G  YA L G    R +  G +  ++ Y+A  YY+RPCSRP G    C  A+DDG  PIPTLVRQEL G+ M+EV + EGI+ +   +G+ +      V   YT T  T +Q+A+ V
Sbjct:   16 QRGMTLVEVMVAMTIGIILLLALGGLFANSTRVFKVNDEFSRMQENGAYALNTIGADLRMAGFYGH-MATNDLTIPV--AIAITNDCG-------TNWAINFAQALG-----TDTL---------AGMSCINSANFLTGSF-------ILVVRGATGIAVL-----------PAALN-----------AGTLYVQSDPSGGILFRGDQYAGL-GTPPKRLFLGGTEAPIYPYQARAYYLRPCSRPTGTGGACL-ASDDGNQPIPTLVRQELAGTTMSEVAIAEGIEAVRILYGLGTGGTGAPVT--YTET-PTAAQFAERV 278          
BLAST of mRNA_P-wetherbeei_contig10433.4.1 vs. uniprot
Match: A0A080LR95_9PROT (Tfp pilus assembly protein PilW n=2 Tax=Candidatus Accumulibacter TaxID=327159 RepID=A0A080LR95_9PROT)

HSP 1 Score: 150 bits (378), Expect = 5.290e-39
Identity = 116/321 (36.14%), Postives = 164/321 (51.09%), Query Frame = 1
Query:    1 QRGMSMMELMVGLAIGMILTLGMFTMIVSTSQSFRVNDDFSRMQENAASAFRYLSDSLRQAGFYGNAMDTSKIAFVAGSAVATTTDCGSASVAPATNFALDFATPIRAYMNTTDPALLISPLTVNANFPCILQANFSAGPAGIANPNPILVTRGASGFRICWAIVAAVANVSPACSNTPSLLANQPNSATTIYVQSDPYQGLVFYGTDYATLRGGATARKYPNGIDMEMFEYRAHVYYVRPCSRPAGGAVNCTGAADDGGHPIPTLVRQELVGSAMTEVPLVEGIDLIDYRFGVDSSNPADGVADFYTGTIVTPSQWAQVV 963
            Q GM+++E+MV +   +IL L + ++ V++++ F+VND+FSRMQEN A A   + + LR AGFYG+ + T+ +A     A+  T DCG+           ++AT     + T   A + S         CI  ANF +G         ILV RGA+G             V PA  N           A T+YVQSDP  G++F G  YA L   ++ R +  G    ++ Y+A  YY+RPCSRP G       A DD   PIPTLVRQEL G+ MTEV + EGI+ +   +G+ +      V   YT T  T  Q+A+ V
Sbjct:   15 QSGMTLVEIMVAMTXXIILLLALGSLFVNSTRVFKVNDEFSRMQENGAYALNTMGNDLRMAGFYGH-IATNDLAIPV--AITITNDCGA-----------NWATTFTQSLGTGTLAKMSS---------CIKAANFLSGSF-------ILVLRGATGIE-----------VQPADLN-----------AGTLYVQSDPGGGILFQGDQYAGLPA-SSKRAFLGGAAAPIYPYQARAYYLRPCSRPTGTGGTVCLATDDNNQPIPTLVRQELAGTTMTEVAIAEGIEAVRILYGLGTGGTGAPVT--YTET-PTAEQFAERV 279          
BLAST of mRNA_P-wetherbeei_contig10433.4.1 vs. uniprot
Match: A0A1J5R402_9ZZZZ (Uncharacterized protein n=1 Tax=mine drainage metagenome TaxID=410659 RepID=A0A1J5R402_9ZZZZ)

HSP 1 Score: 145 bits (366), Expect = 4.490e-37
Identity = 113/330 (34.24%), Postives = 156/330 (47.27%), Query Frame = 1
Query:    1 QRGMSMMELMVGLAIGMILTLGMFTMIVSTSQSFRVNDDFSRMQENAASAFRYLSDSLRQAGFYGNA-------MDTSKIAFVAGSAVATTT--DCGSASVAPATNFALDFATPIRAYMNTTDPALLISPLTVNANFPCILQANFSAGPAGIANPNPILVTRGASGFRICWAIVAAVANVSPACSNTPSLLANQPNSATTIYVQSDPYQGLVFYGTDYATLRGGAT----ARKYPNGIDMEMFEYRAHVYYVRPCSRPAGGAVNCTG-----AADDGGHPIPTLVRQELVGSAMTEVPLVEGIDLIDYRFGVDSSNPADGVADFYTGTIV 936
            QRG++++E+M+ +AIG+IL L +  M+  + + F+V D+FSRMQEN   A   +   +R AGF+G         +D ++        +A +T  DCG+        +A DF  P+  Y               NA  PCI  ANF AG       +PILV RGA G  +     A + NV                    +Y+QS    G+VF G+DY  +           K        +F Y+   YY+RPCSRP+G A + T      A DDGG  IPTLVRQEL G AM E P+ EGI+     +G+D  N A+   D Y  T V
Sbjct:   10 QRGLTLVEMMIAMAIGLILLLALGGMLSGSLRHFKVQDEFSRMQENGQFALNAIGYDIRMAGFFGKLGVVNVAIIDLNQDGIPDPDPIAASTGDDCGA-------GWATDFQHPVFGYSGLVAAG-------ANAALPCIDPANFLAG-------SPILVLRGAGGQEV----TAPLNNV--------------------LYLQSTAAAGIVFNGSDYPLVMANPIHPPWLAKLDGSTPASIFPYQPRAYYLRPCSRPSGAAASATSDPRCRAGDDGGQAIPTLVRQELDGLAMVEQPVAEGIERFSVLYGLDDVNMAN--RDGYVNTYV 292          
BLAST of mRNA_P-wetherbeei_contig10433.4.1 vs. uniprot
Match: A0A0Q8P2J9_9BURK (Uncharacterized protein n=2 Tax=Noviherbaspirillum sp. Root189 TaxID=1736487 RepID=A0A0Q8P2J9_9BURK)

HSP 1 Score: 104 bits (259), Expect = 8.520e-22
Identity = 103/315 (32.70%), Postives = 147/315 (46.67%), Query Frame = 1
Query:    1 QRGMSMMELMVGLAIGMILTLGMFTMIVSTSQSFRVNDDFSRMQENAASAFRYLSDSLRQAGFYGNAMDTSKIAFVAGSAVATTTDCGSASVAPATNFALDFATPIRAYMNTTDPALLISPLTVNANFPCILQANFSAGPAGIANPNPILVTRGASGFRICWAIVAAVANVSPACSNTPSLLANQPNSATTIYVQSDPYQGLVF---YGTDYATLRGGATARKYPNGIDMEMFEYRAHVYYVRPCSRPAGGAVNCTGAADDGGHPIPTLVRQEL---VGS-AMTEVPLVEGIDLIDYRFGVDSSNPADGVADFYT 924
            +RG+S++ELM+ + +G++L  G+ T+I   S + R  ++ SR  EN   A + L D +  AG+YG   + +    VAG A AT  D  +ASVA      LD A P+ A      P  + + L       C+  AN  +G         ILV R A              NV+      PS    +   A   Y+Q+      VF    G    T        K  +G   ++  +  H+YYV PC++PA G   C+GA+DD G+PIPTL R  L    GS A    PLVEGI  + + +G+D  N  DG  D+YT
Sbjct:   15 ERGLSLVELMIAITLGLVLVAGVTTLISQQSSTSRELNNTSRQIENGRYAIQVLRDDIELAGYYGAYFNIALDFPVAG-ASATLPDPCAASVAE-----LDAALPV-AIQGYDSPTTVPTALAA-----CLADANHLSG-------TDILVIRRAD------------TNVTTL---DPSGAGAEAGQA---YIQAGLDTSKVFKRQVGIGPDTSEPRVFTLKKMDGAVADLHRFFVHIYYVSPCNKPATGTT-CSGASDDNGNPIPTLKRLALGVSAGSTAFINTPLVEGIQNVQFDYGIDKDN--DGAPDYYT 289          
BLAST of mRNA_P-wetherbeei_contig10433.4.1 vs. uniprot
Match: A0A2V8DGX6_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8DGX6_9BACT)

HSP 1 Score: 92.8 bits (229), Expect = 1.720e-17
Identity = 97/338 (28.70%), Postives = 145/338 (42.90%), Query Frame = 1
Query:    1 QRGMSMMELMVGLAIGMILTLGMFTMIVSTSQSFRVNDDFSRMQENAASAFRYLSDSLRQAGFYGNAMDTSKIAFVAGSAVATTTDCGSASVAPATNFALDFATPIRAYMNTTDPALL-ISPLTVNANFPCILQANFSAGPAGIANPNPILVTRGASGFRICWAIVAAVANVSPACSNTPSLLANQPNSATTIYVQSDPYQGLVFYGT----------DYATLRGGATARKYPNGIDMEMFEYRAHVYYVRPCSRPAGGAVNCTGAADDGGHPIPTLVRQELVGSA-----MTEVPLVEGIDLIDYRFGVDSS-NPA--------DGVADFYTGTIVT 939
            Q G+S++ELMV + +G++L  G+  +  ++SQS R     ++  EN   A   ++  +  AG+YG        A+  G+ +      G A+       A     P++ Y+     +   +S  T  A     L  N +  P      + +LV R A    + +          P     P++       +  +Y+Q+DP    + +G           D  TL   AT RK  NG    + +Y  H+Y+V PCS PAG    CTGA DDGG PIPTL R EL   A        V + EGI+     +G+D+S N A        DG AD Y   I T
Sbjct:   27 QHGLSLIELMVAMTLGLMLLAGLAVVFANSSQSQRELQKSAQQIENGRYAMEAVTQDIHLAGYYGRYS-----AYADGTTLPDPCIIGDAAA-----LAAALGVPVQGYVVANQASRPDLSATTCGA---ATLLPNVNLYPG-----SDVLVIRRAGTTPLRY----------PGDGLLPAVATADTGVSNEVYIQTDPATVEIQFGAGSTITPTSRADGVTL---ATIRK-KNGNAESIRKYHVHIYFVAPCSVPAGSGDVCTGANDDGGRPIPTLKRLELGVDASGNRKFNVVAIAEGIEAFKIEYGIDNSPNSANSSTQRIGDGAADVYIPNIST 332          
BLAST of mRNA_P-wetherbeei_contig10433.4.1 vs. uniprot
Match: A0A2A4WAD7_9GAMM (Uncharacterized protein n=2 Tax=Thiotrichales TaxID=72273 RepID=A0A2A4WAD7_9GAMM)

HSP 1 Score: 90.9 bits (224), Expect = 3.940e-17
Identity = 101/324 (31.17%), Postives = 139/324 (42.90%), Query Frame = 1
Query:    1 QRGMSMMELMVGLAIGMILTLGMFTMIVSTSQSFRVNDDFSRMQENAASAFRYLSDSLRQAGFYGNAMDTSKIAFVAGSAVATTTDCGSASVAPATNFALDFATPIRAYMNTTDPALLISPLTVNANFPCILQANFSAGPA-GIANPNPILVTRGASGFRICWAIVAAVANVSPACSNTPSLLANQPNSATTIYVQSDPYQGLVFYGTDYATLRGGATARKYPNGIDMEMFEYRAHVYYVRPCSRPAGGAVNCTGAADDGGHPIPTLVRQELVGSAMTEVPLVEGIDLIDYRFGVDSSNPADGVADFYT--GTIVTPSQWAQVV 963
            Q G+S++E+MV + IG++L  G     ++  QS  V    + MQEN   A R ++DSL  A  +G          VAG         G  + APA        T I A  N    A +++       F        +   A G      + V R A G                     P L+AN   S T I+V ++   G        A+L  G  A    N   +  + Y   VYY+RPCS  A  A  C  A+DDGG+PIPTLVR  L  + +    LV G++ +   +GVD+   AD  A+FY   G I T +QWAQVV
Sbjct:   20 QAGLSLVEVMVAMGIGLVLMTGFIQFFIANKQSHEVLGGLNGMQENGRYAVRVITDSLHAADHWGG---------VAG---------GDVTGAPA-------VTGIGAICNA---AWILNTSVGIQGFDGADDTPLAGCTATGYQIDTDVFVVRHAGGTYF------------------PGLIAN--GSDTDIWVNTNVGMG--------ASLSAG-NAVNVVNVNGLYHYPYNISVYYIRPCSVMAAAA--CA-ASDDGGNPIPTLVRLSLQENQLVAQTLVSGVEQMQIEYGVDTD--ADTNANFYASAGAITTTAQWAQVV 281          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10433.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7V7XQ10_9RHOO4.750e-6243.65Uncharacterized protein n=2 Tax=Rhodocyclaceae bac... [more]
A0A809R1T4_9PROT9.810e-6043.22Type IV pilus-assembly protein pilW n=1 Tax=Candid... [more]
A0A1J5S6E5_9ZZZZ3.210e-5940.36Uncharacterized protein n=1 Tax=mine drainage meta... [more]
A0A1A8XGJ4_9PROT3.210e-5239.56Tfp pilus assembly protein PilW-like protein n=1 T... [more]
A0A080MK65_9PROT7.540e-4438.32Tfp pilus assembly protein PilW n=5 Tax=Candidatus... [more]
A0A080LR95_9PROT5.290e-3936.14Tfp pilus assembly protein PilW n=2 Tax=Candidatus... [more]
A0A1J5R402_9ZZZZ4.490e-3734.24Uncharacterized protein n=1 Tax=mine drainage meta... [more]
A0A0Q8P2J9_9BURK8.520e-2232.70Uncharacterized protein n=2 Tax=Noviherbaspirillum... [more]
A0A2V8DGX6_9BACT1.720e-1728.70Uncharacterized protein (Fragment) n=1 Tax=Acidoba... [more]
A0A2A4WAD7_9GAMM3.940e-1731.17Uncharacterized protein n=2 Tax=Thiotrichales TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10433contigP-wetherbeei_contig10433:1385..2347 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog522306.CAP2UW1_2241
Preferred namepilW
PFAMsN_methyl,PilW
Model size963
Max annot lvl28216|Betaproteobacteria
KEGG koko:K02672
Hectar predicted targeting categorysignal peptide
Exons1
Evalue1.04e-39
EggNOG OGsCOG4966@1|root,COG4966@2|Bacteria,1RC4Q@1224|Proteobacteria,2VS7N@28216|Betaproteobacteria
DescriptionTYPE 4 fimbrial BIOGENESIS
Cds size954
COG categoryNU
BRITEko00000,ko02035,ko02044
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185869.1605003-UTR-P-wetherbeei_contig10433:1384..13931683185869.1605003-UTR-P-wetherbeei_contig10433:1384..1393Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig10433 1385..1393 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185869.171712-CDS-P-wetherbeei_contig10433:1393..23471683185869.171712-CDS-P-wetherbeei_contig10433:1393..2347Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10433 1394..2347 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10433.4.1prot_P-wetherbeei_contig10433.4.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig10433 1394..2347 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig10433.4.1

>prot_P-wetherbeei_contig10433.4.1 ID=prot_P-wetherbeei_contig10433.4.1|Name=mRNA_P-wetherbeei_contig10433.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=318bp
MSMMELMVGLAIGMILTLGMFTMIVSTSQSFRVNDDFSRMQENAASAFRY
LSDSLRQAGFYGNAMDTSKIAFVAGSAVATTTDCGSASVAPATNFALDFA
TPIRAYMNTTDPALLISPLTVNANFPCILQANFSAGPAGIANPNPILVTR
GASGFRICWAIVAAVANVSPACSNTPSLLANQPNSATTIYVQSDPYQGLV
FYGTDYATLRGGATARKYPNGIDMEMFEYRAHVYYVRPCSRPAGGAVNCT
GAADDGGHPIPTLVRQELVGSAMTEVPLVEGIDLIDYRFGVDSSNPADGV
ADFYTGTIVTPSQWAQVV
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mRNA from alignment at P-wetherbeei_contig10433:1385..2347+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig10433.4.1 ID=mRNA_P-wetherbeei_contig10433.4.1|Name=mRNA_P-wetherbeei_contig10433.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=963bp|location=Sequence derived from alignment at P-wetherbeei_contig10433:1385..2347+ (Phaeothamnion wetherbeei SAG_119_79)
CAACGCGGCATGTCGATGATGGAACTGATGGTCGGCCTCGCCATCGGCAT GATACTGACGCTCGGCATGTTCACCATGATAGTCAGCACTTCGCAGTCGT TCCGCGTCAACGATGATTTTTCGCGCATGCAGGAAAATGCCGCCAGTGCG TTCCGCTACCTGAGCGACTCGCTGCGGCAGGCGGGCTTCTACGGCAACGC GATGGACACCAGCAAGATTGCGTTCGTGGCGGGCAGCGCGGTCGCGACGA CCACGGATTGCGGCTCGGCGAGCGTTGCGCCGGCGACAAATTTCGCGCTG GATTTTGCGACCCCGATTCGCGCCTACATGAACACGACCGATCCGGCGCT TCTGATCAGCCCGTTGACCGTGAACGCAAATTTCCCTTGCATTCTGCAGG CGAATTTCAGTGCGGGCCCCGCCGGGATTGCAAACCCCAACCCGATCCTG GTAACGCGCGGCGCGAGCGGTTTTCGCATTTGCTGGGCGATTGTCGCCGC CGTGGCAAACGTGTCCCCAGCCTGTTCAAACACACCCAGCCTGCTGGCCA ATCAACCGAATTCTGCGACGACAATCTACGTGCAGTCGGATCCGTATCAG GGGCTGGTGTTCTACGGCACGGATTATGCGACTTTGCGCGGCGGCGCGAC CGCGCGCAAATATCCGAACGGCATCGACATGGAAATGTTCGAGTACCGGG CGCACGTCTACTATGTCCGTCCGTGCAGCCGGCCCGCCGGTGGCGCCGTC AACTGTACGGGCGCCGCCGATGACGGCGGCCACCCGATACCGACGCTGGT GCGCCAGGAACTGGTCGGCAGCGCCATGACCGAGGTGCCGCTGGTCGAAG GCATCGACCTCATCGACTACCGTTTCGGCGTCGACAGCAGCAACCCGGCT GACGGGGTAGCGGACTTTTACACCGGCACTATCGTGACCCCTTCGCAATG GGCGCAGGTAGTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig10433:1385..2347+

>mRNA_P-wetherbeei_contig10433.4.1 ID=mRNA_P-wetherbeei_contig10433.4.1|Name=mRNA_P-wetherbeei_contig10433.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=954bp|location=Sequence derived from alignment at P-wetherbeei_contig10433:1385..2347+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTCGATGATGGAACTGATGGTCGGCCTCGCCATCGGCATGATACTGAC
GCTCGGCATGTTCACCATGATAGTCAGCACTTCGCAGTCGTTCCGCGTCA
ACGATGATTTTTCGCGCATGCAGGAAAATGCCGCCAGTGCGTTCCGCTAC
CTGAGCGACTCGCTGCGGCAGGCGGGCTTCTACGGCAACGCGATGGACAC
CAGCAAGATTGCGTTCGTGGCGGGCAGCGCGGTCGCGACGACCACGGATT
GCGGCTCGGCGAGCGTTGCGCCGGCGACAAATTTCGCGCTGGATTTTGCG
ACCCCGATTCGCGCCTACATGAACACGACCGATCCGGCGCTTCTGATCAG
CCCGTTGACCGTGAACGCAAATTTCCCTTGCATTCTGCAGGCGAATTTCA
GTGCGGGCCCCGCCGGGATTGCAAACCCCAACCCGATCCTGGTAACGCGC
GGCGCGAGCGGTTTTCGCATTTGCTGGGCGATTGTCGCCGCCGTGGCAAA
CGTGTCCCCAGCCTGTTCAAACACACCCAGCCTGCTGGCCAATCAACCGA
ATTCTGCGACGACAATCTACGTGCAGTCGGATCCGTATCAGGGGCTGGTG
TTCTACGGCACGGATTATGCGACTTTGCGCGGCGGCGCGACCGCGCGCAA
ATATCCGAACGGCATCGACATGGAAATGTTCGAGTACCGGGCGCACGTCT
ACTATGTCCGTCCGTGCAGCCGGCCCGCCGGTGGCGCCGTCAACTGTACG
GGCGCCGCCGATGACGGCGGCCACCCGATACCGACGCTGGTGCGCCAGGA
ACTGGTCGGCAGCGCCATGACCGAGGTGCCGCTGGTCGAAGGCATCGACC
TCATCGACTACCGTTTCGGCGTCGACAGCAGCAACCCGGCTGACGGGGTA
GCGGACTTTTACACCGGCACTATCGTGACCCCTTCGCAATGGGCGCAGGT
AGTG
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