mRNA_P-wetherbeei_contig10426.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig10426.1.1
Unique NamemRNA_P-wetherbeei_contig10426.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig10426.1.1 vs. uniprot
Match: A0A1H8V7D0_9PROT (Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1H8V7D0_9PROT)

HSP 1 Score: 132 bits (333), Expect = 9.070e-38
Identity = 58/77 (75.32%), Postives = 64/77 (83.12%), Query Frame = 1
Query:    1 PEDYDAKLNHALANGYTIGQHGDSTRGRFVYLWNEGHPGTVIEMAHMTPTRKRVFDAVRDAARNWDGSDPIRRAWPS 231
            P DYD  L  ALA GYT+GQ GDS RGRFVYLWNEGHPGTVIEMAHMT  R+R+FDA+R AA  WDGSDPIRR+WP+
Sbjct:  100 PVDYDDILKRALATGYTVGQQGDSARGRFVYLWNEGHPGTVIEMAHMTEARRRIFDAIRAAAVGWDGSDPIRRSWPT 176          
BLAST of mRNA_P-wetherbeei_contig10426.1.1 vs. uniprot
Match: A0A2E4Y1C8_9PROT (Glyoxalase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E4Y1C8_9PROT)

HSP 1 Score: 131 bits (329), Expect = 3.670e-37
Identity = 58/77 (75.32%), Postives = 62/77 (80.52%), Query Frame = 1
Query:    1 PEDYDAKLNHALANGYTIGQHGDSTRGRFVYLWNEGHPGTVIEMAHMTPTRKRVFDAVRDAARNWDGSDPIRRAWPS 231
            P DYD KL  ALA GY+IGQHGDS RGRFVYLW EGHPGTVIEMA M P R R+FD +R AA +WDGSDPIR AWPS
Sbjct:  100 PADYDEKLERALATGYSIGQHGDSPRGRFVYLWEEGHPGTVIEMAEMAPARTRIFDGIRAAAVDWDGSDPIRDAWPS 176          
BLAST of mRNA_P-wetherbeei_contig10426.1.1 vs. uniprot
Match: A0A537S747_9PROT (VOC family protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537S747_9PROT)

HSP 1 Score: 127 bits (319), Expect = 1.110e-35
Identity = 57/77 (74.03%), Postives = 61/77 (79.22%), Query Frame = 1
Query:    1 PEDYDAKLNHALANGYTIGQHGDSTRGRFVYLWNEGHPGTVIEMAHMTPTRKRVFDAVRDAARNWDGSDPIRRAWPS 231
            PE+YD     ALA GYT+GQ GDS RGRFVY  NEGHPGTVIEMAH TPTR R+FDAVR AA  WDGSDP+RR WPS
Sbjct:   97 PENYDEIYQRALATGYTVGQEGDSPRGRFVYFRNEGHPGTVIEMAHATPTRMRIFDAVRAAAAGWDGSDPVRRQWPS 173          
BLAST of mRNA_P-wetherbeei_contig10426.1.1 vs. uniprot
Match: A0A257PH25_9PROT (Glyoxalase n=1 Tax=Rhodospirillales bacterium 20-64-7 TaxID=1970566 RepID=A0A257PH25_9PROT)

HSP 1 Score: 123 bits (308), Expect = 5.610e-34
Identity = 56/77 (72.73%), Postives = 61/77 (79.22%), Query Frame = 1
Query:    1 PEDYDAKLNHALANGYTIGQHGDSTRGRFVYLWNEGHPGTVIEMAHMTPTRKRVFDAVRDAARNWDGSDPIRRAWPS 231
            PEDYDA    ALA+GYT+GQ GDS RGRFVY   EGHPGTVIEMAH TP R R+F AVR AA +WDGSDPIRR WP+
Sbjct:  100 PEDYDAIYQRALASGYTVGQEGDSPRGRFVYFRQEGHPGTVIEMAHATPERMRIFGAVRAAAVDWDGSDPIRRQWPT 176          
BLAST of mRNA_P-wetherbeei_contig10426.1.1 vs. uniprot
Match: A0A432EYU3_9GAMM (VOC family protein n=6 Tax=root TaxID=1 RepID=A0A432EYU3_9GAMM)

HSP 1 Score: 119 bits (299), Expect = 1.230e-32
Identity = 52/76 (68.42%), Postives = 60/76 (78.95%), Query Frame = 1
Query:    1 PEDYDAKLNHALANGYTIGQHGDSTRGRFVYLWNEGHPGTVIEMAHMTPTRKRVFDAVRDAARNWDGSDPIRRAWP 228
            PE+YD     AL +GY +GQ  DS RGRFVY +NEGHPGTVIEMAH TP R+R+FDAVR+AA +WDGSDPIR  WP
Sbjct:   99 PENYDELYQRALDSGYEVGQEADSVRGRFVYFFNEGHPGTVIEMAHFTPERRRIFDAVREAAVDWDGSDPIRDQWP 174          
BLAST of mRNA_P-wetherbeei_contig10426.1.1 vs. uniprot
Match: A0A1F7LCP7_9BACT (Glyoxalase n=1 Tax=Candidatus Rokubacteria bacterium GWC2_70_16 TaxID=1802097 RepID=A0A1F7LCP7_9BACT)

HSP 1 Score: 119 bits (298), Expect = 1.840e-32
Identity = 52/77 (67.53%), Postives = 60/77 (77.92%), Query Frame = 1
Query:    1 PEDYDAKLNHALANGYTIGQHGDSTRGRFVYLWNEGHPGTVIEMAHMTPTRKRVFDAVRDAARNWDGSDPIRRAWPS 231
            PE+YDA    ALA+GYT+GQ GDS RGRFVY  NEGHPGTVIEM  +T TR+R FD +R  A+ WDGSDPIRR WP+
Sbjct:  100 PENYDALYQRALASGYTVGQEGDSPRGRFVYFRNEGHPGTVIEMGDLTATRRRTFDQIRAVAQGWDGSDPIRRQWPT 176          
BLAST of mRNA_P-wetherbeei_contig10426.1.1 vs. uniprot
Match: A0A2E5Q9H9_9PROT (Glyoxalase n=3 Tax=root TaxID=1 RepID=A0A2E5Q9H9_9PROT)

HSP 1 Score: 118 bits (296), Expect = 3.490e-32
Identity = 51/76 (67.11%), Postives = 61/76 (80.26%), Query Frame = 1
Query:    1 PEDYDAKLNHALANGYTIGQHGDSTRGRFVYLWNEGHPGTVIEMAHMTPTRKRVFDAVRDAARNWDGSDPIRRAWP 228
            PED+D+    AL +GY +GQ  DS RGRFVY +NEGHPGTVIEMAH+T  R+R+FDAVR+AA +WDGSDPIR  WP
Sbjct:   99 PEDFDSVYRQALDSGYEVGQEADSPRGRFVYFFNEGHPGTVIEMAHLTAERRRIFDAVREAAVDWDGSDPIRENWP 174          
BLAST of mRNA_P-wetherbeei_contig10426.1.1 vs. uniprot
Match: A0A382DHS6_9ZZZZ (Uncharacterized protein n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382DHS6_9ZZZZ)

HSP 1 Score: 118 bits (295), Expect = 4.950e-32
Identity = 48/76 (63.16%), Postives = 61/76 (80.26%), Query Frame = 1
Query:    1 PEDYDAKLNHALANGYTIGQHGDSTRGRFVYLWNEGHPGTVIEMAHMTPTRKRVFDAVRDAARNWDGSDPIRRAWP 228
            PEDYD   + AL  GY +GQ  D+ RGRFVY WNEGHPGTVIEMAH++  R+R+FDA+R+AA +W+G++PIRR WP
Sbjct:   99 PEDYDTLYHQALEAGYEVGQEADTPRGRFVYFWNEGHPGTVIEMAHLSSERRRIFDAIREAAVDWEGAEPIRREWP 174          
BLAST of mRNA_P-wetherbeei_contig10426.1.1 vs. uniprot
Match: A0A2D7JR67_9PROT (Glyoxalase n=2 Tax=Rhodospirillales TaxID=204441 RepID=A0A2D7JR67_9PROT)

HSP 1 Score: 115 bits (287), Expect = 8.740e-31
Identity = 49/77 (63.64%), Postives = 62/77 (80.52%), Query Frame = 1
Query:    1 PEDYDAKLNHALANGYTIGQHGDSTRGRFVYLWNEGHPGTVIEMAHMTPTRKRVFDAVRDAARNWDGSDPIRRAWPS 231
            P+DYD +L +ALANGY IGQ G+S RGRFVYL++EGHPGTVIEMA +T  R+ +F A+  A+ +WDG DPIRR WP+
Sbjct:  100 PKDYDRRLQNALANGYEIGQQGESPRGRFVYLYDEGHPGTVIEMAELTAERQAIFGAIEAASVDWDGQDPIRRTWPT 176          
BLAST of mRNA_P-wetherbeei_contig10426.1.1 vs. uniprot
Match: A0A3B9V4G3_9GAMM (Glyoxalase n=4 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A3B9V4G3_9GAMM)

HSP 1 Score: 114 bits (284), Expect = 2.350e-30
Identity = 50/77 (64.94%), Postives = 59/77 (76.62%), Query Frame = 1
Query:    1 PEDYDAKLNHALANGYTIGQHGDSTRGRFVYLWNEGHPGTVIEMAHMTPTRKRVFDAVRDAARNWDGSDPIRRAWPS 231
            PED++     AL  GY +GQ  DS RGRFVY  NEGHPGTVIEMA +TP R+R+FD VR+AA NWDG++PIRR WPS
Sbjct:   99 PEDFEGYYATALKAGYKVGQEADSPRGRFVYFLNEGHPGTVIEMAALTPERRRIFDGVREAAVNWDGTEPIRREWPS 175          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10426.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1H8V7D0_9PROT9.070e-3875.32Glyoxalase/Bleomycin resistance protein/Dioxygenas... [more]
A0A2E4Y1C8_9PROT3.670e-3775.32Glyoxalase n=1 Tax=Rhodospirillaceae bacterium Tax... [more]
A0A537S747_9PROT1.110e-3574.03VOC family protein n=1 Tax=Alphaproteobacteria bac... [more]
A0A257PH25_9PROT5.610e-3472.73Glyoxalase n=1 Tax=Rhodospirillales bacterium 20-6... [more]
A0A432EYU3_9GAMM1.230e-3268.42VOC family protein n=6 Tax=root TaxID=1 RepID=A0A4... [more]
A0A1F7LCP7_9BACT1.840e-3267.53Glyoxalase n=1 Tax=Candidatus Rokubacteria bacteri... [more]
A0A2E5Q9H9_9PROT3.490e-3267.11Glyoxalase n=3 Tax=root TaxID=1 RepID=A0A2E5Q9H9_9... [more]
A0A382DHS6_9ZZZZ4.950e-3263.16Uncharacterized protein n=1 Tax=marine metagenome ... [more]
A0A2D7JR67_9PROT8.740e-3163.64Glyoxalase n=2 Tax=Rhodospirillales TaxID=204441 R... [more]
A0A3B9V4G3_9GAMM2.350e-3064.94Glyoxalase n=4 Tax=Gammaproteobacteria TaxID=1236 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10426contigP-wetherbeei_contig10426:3..236 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1121106.JQKB01000128_gene2697
PFAMsGlyoxalase_4
Model size234
Max annot lvl204441|Rhodospirillales
Hectar predicted targeting categoryother localisation
Exons1
Evalue7.87e-21
EggNOG OGsCOG0346@1|root,COG0346@2|Bacteria,1MWHG@1224|Proteobacteria,2U1WR@28211|Alphaproteobacteria,2JRST@204441|Rhodospirillales
DescriptionGlyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Cds size234
COG categoryE
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185868.8011446-CDS-P-wetherbeei_contig10426:2..2361683185868.8011446-CDS-P-wetherbeei_contig10426:2..236Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10426 3..236 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10426.1.1prot_P-wetherbeei_contig10426.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig10426 3..236 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig10426.1.1

>prot_P-wetherbeei_contig10426.1.1 ID=prot_P-wetherbeei_contig10426.1.1|Name=mRNA_P-wetherbeei_contig10426.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=78bp
PEDYDAKLNHALANGYTIGQHGDSTRGRFVYLWNEGHPGTVIEMAHMTPT
RKRVFDAVRDAARNWDGSDPIRRAWPS*
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mRNA from alignment at P-wetherbeei_contig10426:3..236+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig10426.1.1 ID=mRNA_P-wetherbeei_contig10426.1.1|Name=mRNA_P-wetherbeei_contig10426.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=234bp|location=Sequence derived from alignment at P-wetherbeei_contig10426:3..236+ (Phaeothamnion wetherbeei SAG_119_79)
CCCGAGGACTACGACGCGAAGCTCAATCATGCGCTGGCCAACGGCTACAC CATCGGCCAGCACGGCGACAGCACGCGCGGCCGCTTCGTCTATCTCTGGA ACGAAGGCCATCCCGGCACGGTGATCGAGATGGCCCACATGACGCCGACC CGCAAACGCGTGTTCGACGCCGTGCGCGATGCGGCGCGGAATTGGGATGG CAGCGACCCGATCCGGCGCGCTTGGCCGAGCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig10426:3..236+

>mRNA_P-wetherbeei_contig10426.1.1 ID=mRNA_P-wetherbeei_contig10426.1.1|Name=mRNA_P-wetherbeei_contig10426.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=234bp|location=Sequence derived from alignment at P-wetherbeei_contig10426:3..236+ (Phaeothamnion wetherbeei SAG_119_79)
CCCGAGGACTACGACGCGAAGCTCAATCATGCGCTGGCCAACGGCTACAC
CATCGGCCAGCACGGCGACAGCACGCGCGGCCGCTTCGTCTATCTCTGGA
ACGAAGGCCATCCCGGCACGGTGATCGAGATGGCCCACATGACGCCGACC
CGCAAACGCGTGTTCGACGCCGTGCGCGATGCGGCGCGGAATTGGGATGG
CAGCGACCCGATCCGGCGCGCTTGGCCGAGCTGA
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