mRNA_P-wetherbeei_contig10422.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-wetherbeei_contig10422.3.1
Unique Name	mRNA_P-wetherbeei_contig10422.3.1
Type	mRNA
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)

Homology

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BLAST of mRNA_P-wetherbeei_contig10422.3.1 vs. uniprot
Match: A0A8J4W007_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae 00238/432 TaxID=1284355 RepID=A0A8J4W007_9STRA)

HSP 1 Score: 206 bits (524), Expect = 1.100e-62
Identity = 95/139 (68.35%), Postives = 113/139 (81.29%), Query Frame = 1

Query:    1 QGVPSARRAQLILLAFALLDVDKSGVVDLDDIRRRYDTSKHPDVIAGRKKPDEVLREFLDTFDGGENDGKVSPQEFAKYYATVSASIDDDDYFELMMRNAWHISGGEGWSANSTCRRLLVTHADGRQTVEAPTHDLGIT 417
            +G  + RR QL+L AF +LD D SG+VDL+DI+ +Y   +HP V++G K  DEVLREFLDTFDGGE DGKV P EF +YYA VSASIDDDDYFELM+RNAWHISGGEGWSAN+TCRR+LVTHADG  T+E   +DLGI+
Sbjct:  205 RGELNERRTQLVLAAFKILDADGSGIVDLNDIKAKYSADQHPAVLSGSKTQDEVLREFLDTFDGGEKDGKVHPSEFVRYYANVSASIDDDDYFELMIRNAWHISGGEGWSANTTCRRVLVTHADGSHTIEEVKNDLGIS 343

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BLAST of mRNA_P-wetherbeei_contig10422.3.1 vs. uniprot
Match: A0A662XRY8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XRY8_9STRA)

HSP 1 Score: 201 bits (510), Expect = 1.620e-62
Identity = 94/138 (68.12%), Postives = 109/138 (78.99%), Query Frame = 1

Query:    1 QGVPSARRAQLILLAFALLDVDKSGVVDLDDIRRRYDTSKHPDVIAGRKKPDEVLREFLDTFDGGENDGKVSPQEFAKYYATVSASIDDDDYFELMMRNAWHISGGEGWSANSTCRRLLVTHADGRQTVEAPTHDLGI 414
            +G  + RR QL+L AF +LD D +GVVDL+DI+  Y+  KHP V+ GR   DEVLREFLDTFDGGE DGKV P EF +YYA VSASIDDDDYFELM+RNAWH+SGGEGW AN+TCRR+LVTHADG  TVE    D+GI
Sbjct:   46 RGELNDRRTQLVLAAFKILDADGNGVVDLNDIKANYNADKHPGVLEGRMTKDEVLREFLDTFDGGEKDGKVHPNEFVRYYANVSASIDDDDYFELMIRNAWHMSGGEGWVANTTCRRVLVTHADGSHTVEEVKDDIGI 183

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BLAST of mRNA_P-wetherbeei_contig10422.3.1 vs. uniprot
Match: A0A397DXN7_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DXN7_9STRA)

HSP 1 Score: 196 bits (499), Expect = 6.450e-61
Identity = 90/138 (65.22%), Postives = 112/138 (81.16%), Query Frame = 1

Query:    1 QGVPSARRAQLILLAFALLDVDKSGVVDLDDIRRRYDTSKHPDVIAGRKKPDEVLREFLDTFDGGENDGKVSPQEFAKYYATVSASIDDDDYFELMMRNAWHISGGEGWSANSTCRRLLVTHADGRQTVEAPTHDLGI 414
            +G  + RR QL+LLAFA++D D +G++DLDDI  +Y+  KHPDV++G++   +V REFLDTFDGGE DGKV P EF +YYA VSASIDDDDYFELM+RNAWHISGG+GWSANSTCRR+LVT  DG Q V+   +DLG+
Sbjct:   55 RGDLNDRRRQLVLLAFAVVDADGNGILDLDDIIAKYNADKHPDVLSGKRTKHDVFREFLDTFDGGEKDGKVHPSEFVRYYANVSASIDDDDYFELMIRNAWHISGGDGWSANSTCRRVLVTLEDGSQRVQEVENDLGV 192

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BLAST of mRNA_P-wetherbeei_contig10422.3.1 vs. uniprot
Match: A0A067C837_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C837_SAPPC)

HSP 1 Score: 204 bits (518), Expect = 2.010e-60
Identity = 94/145 (64.83%), Postives = 117/145 (80.69%), Query Frame = 1

Query:    1 QGVPSARRAQLILLAFALLDVDKSGVVDLDDIRRRYDTSKHPDVIAGRKKPDEVLREFLDTFDGGENDGKVSPQEFAKYYATVSASIDDDDYFELMMRNAWHISGGEGWSANSTCRRLLVTHADGRQTVEAPTHDLGITPAANAA 435
            +G  + RR Q++LLAF ++D + +G+V+LDDI  +Y+  +HPDVI+GRK  +E+ REFLDTFDGGE DGKV+P EF +YYA VSASIDDDDYFELM+RNAWHISGGEGW ANSTCRR+LVTH DG QTVE   +D+GI+    AA
Sbjct:  349 RGELNERRKQMVLLAFTVIDANGNGIVELDDIVAKYNADQHPDVISGRKTKNEIFREFLDTFDGGEKDGKVTPDEFIRYYANVSASIDDDDYFELMIRNAWHISGGEGWCANSTCRRVLVTHPDGTQTVEEVKNDIGISATDKAA 493

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BLAST of mRNA_P-wetherbeei_contig10422.3.1 vs. uniprot
Match: A0A5D6Y833_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y833_9STRA)

HSP 1 Score: 201 bits (511), Expect = 1.110e-59
Identity = 92/138 (66.67%), Postives = 112/138 (81.16%), Query Frame = 1

Query:    1 QGVPSARRAQLILLAFALLDVDKSGVVDLDDIRRRYDTSKHPDVIAGRKKPDEVLREFLDTFDGGENDGKVSPQEFAKYYATVSASIDDDDYFELMMRNAWHISGGEGWSANSTCRRLLVTHADGRQTVEAPTHDLGI 414
            +G  + RR QL+L AF + D D SGV++L+DI++RY+  +HP V+AG K  DEV R+FLDTFDGGE DGKV P EF +YYA VSASIDDDDYFELM+RNAWH+SGGEGW+AN+TCRR+LVTHADGRQTVE    D+ I
Sbjct:  311 EGELNDRRQQLVLAAFKVFDADGSGVIELNDIQQRYNADRHPAVLAGEKTRDEVFRDFLDTFDGGEKDGKVHPNEFVRYYANVSASIDDDDYFELMIRNAWHMSGGEGWAANTTCRRVLVTHADGRQTVEEVKDDIAI 448

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BLAST of mRNA_P-wetherbeei_contig10422.3.1 vs. uniprot
Match: A0A2D4C046_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C046_PYTIN)

HSP 1 Score: 203 bits (516), Expect = 1.890e-59
Identity = 92/138 (66.67%), Postives = 113/138 (81.88%), Query Frame = 1

Query:    1 QGVPSARRAQLILLAFALLDVDKSGVVDLDDIRRRYDTSKHPDVIAGRKKPDEVLREFLDTFDGGENDGKVSPQEFAKYYATVSASIDDDDYFELMMRNAWHISGGEGWSANSTCRRLLVTHADGRQTVEAPTHDLGI 414
            +G  + RR Q++L AF +LD D +G+++L+DI  +Y    HPDV++G+K   EVLREFLDTFDGGE DGKV P+EF +YYA VSASIDDDDYFELM+RNAWHISGGEGW AN+TCRR+LVTHADGRQTVE   +D+GI
Sbjct:  429 RGELNERRTQMVLAAFKVLDADGNGIIELNDITAKYSADSHPDVLSGKKTTAEVLREFLDTFDGGEKDGKVHPREFIRYYANVSASIDDDDYFELMIRNAWHISGGEGWCANTTCRRVLVTHADGRQTVEEVKNDIGI 566

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BLAST of mRNA_P-wetherbeei_contig10422.3.1 vs. uniprot
Match: W4GM18_9STRA (Uncharacterized protein n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GM18_9STRA)

HSP 1 Score: 196 bits (498), Expect = 2.580e-57
Identity = 90/138 (65.22%), Postives = 112/138 (81.16%), Query Frame = 1

Query:    1 QGVPSARRAQLILLAFALLDVDKSGVVDLDDIRRRYDTSKHPDVIAGRKKPDEVLREFLDTFDGGENDGKVSPQEFAKYYATVSASIDDDDYFELMMRNAWHISGGEGWSANSTCRRLLVTHADGRQTVEAPTHDLGI 414
            +G  + RR QL+LLAFA++D D +G++DLDDI  +Y+  KHPDV++G++   +V REFLDTFDGGE DGKV P EF +YYA VSASIDDDDYFELM+RNAWHISGG+GWSANSTCRR+LVT  DG Q V+   +DLG+
Sbjct:  378 RGDLNDRRRQLVLLAFAVVDADGNGILDLDDIIAKYNADKHPDVLSGKRTKHDVFREFLDTFDGGEKDGKVHPTEFVRYYANVSASIDDDDYFELMIRNAWHISGGDGWSANSTCRRVLVTLEDGSQRVQEVENDLGV 515

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BLAST of mRNA_P-wetherbeei_contig10422.3.1 vs. uniprot
Match: A0A6U0WUQ8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U0WUQ8_9STRA)

HSP 1 Score: 190 bits (483), Expect = 1.430e-54
Identity = 88/138 (63.77%), Postives = 108/138 (78.26%), Query Frame = 1

Query:    1 QGVPSARRAQLILLAFALLDVDKSGVVDLDDIRRRYDTSKHPDVIAGRKKPDEVLREFLDTFDGGENDGKVSPQEFAKYYATVSASIDDDDYFELMMRNAWHISGGEGWSANSTCRRLLVTHADGRQTVEAPTHDLGI 414
            +G  + RR Q++LLAF ++D DKSG++DLDDI   YD SKHPDVIAG++   E+LREFLD FDGGE DG+V P EF +YY+ VSA IDDDDYFELM+RNAWHI GGEGW AN+  +R+LVT ADG Q VE   +DLG+
Sbjct:  110 RGKLNERREQMVLLAFDVIDKDKSGILDLDDITEAYDASKHPDVIAGKRTKQEILREFLDVFDGGEKDGQVFPNEFMRYYSNVSAYIDDDDYFELMIRNAWHIPGGEGWCANTANKRVLVTDADGNQRVECIQNDLGL 247

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BLAST of mRNA_P-wetherbeei_contig10422.3.1 vs. uniprot
Match: A0A0P1ADA4_PLAHL (CRN-like protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ADA4_PLAHL)

HSP 1 Score: 179 bits (455), Expect = 1.370e-53
Identity = 80/121 (66.12%), Postives = 98/121 (80.99%), Query Frame = 1

Query:   52 LLDVDKSGVVDLDDIRRRYDTSKHPDVIAGRKKPDEVLREFLDTFDGGENDGKVSPQEFAKYYATVSASIDDDDYFELMMRNAWHISGGEGWSANSTCRRLLVTHADGRQTVEAPTHDLGI 414
            +LD D SGVVDLDD++ +Y   +HPDV+ GRK  DEVL EFLDTFDGGE DGKV P EF +YY  +SASIDDDDYFEL++RNAWH+SGGEGWSAN++CRR+LV H +G  T+E   +D+GI
Sbjct:    1 MLDADGSGVVDLDDMKIKYRAKEHPDVLQGRKTEDEVLLEFLDTFDGGEKDGKVHPNEFVRYYTNISASIDDDDYFELVIRNAWHMSGGEGWSANTSCRRVLVKHINGSYTIEEVKNDMGI 121

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BLAST of mRNA_P-wetherbeei_contig10422.3.1 vs. uniprot
Match: A0A484DVV8_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DVV8_BRELC)

HSP 1 Score: 183 bits (464), Expect = 2.370e-52
Identity = 85/138 (61.59%), Postives = 106/138 (76.81%), Query Frame = 1

Query:    1 QGVPSARRAQLILLAFALLDVDKSGVVDLDDIRRRYDTSKHPDVIAGRKKPDEVLREFLDTFDGGENDGKVSPQEFAKYYATVSASIDDDDYFELMMRNAWHISGGEGWSANSTCRRLLVTHADGRQTVEAPTHDLGI 414
            +G  + RR QL+L+AF  LD D + VVDL+D++ +Y+ +KHP V+ GRK  DEVL EFLDTFDGG  D KV P EF +YYA +SASIDDDDYFELM+RNAWH+SGGEG  AN+TCRR+LV H DG  T+E   +D+GI
Sbjct:  327 RGELNDRRMQLVLMAFQSLDTDGNHVVDLNDLKGKYNVTKHPQVLEGRKTEDEVLLEFLDTFDGGAKDNKVHPNEFVRYYANISASIDDDDYFELMIRNAWHLSGGEGACANTTCRRVLVEHDDGSHTIEEVKNDMGI 464

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig10422.3.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig10422.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A8J4W007_9STRA	1.100e-62	68.35	Uncharacterized protein n=1 Tax=Phytophthora kerno...	[more]
A0A662XRY8_9STRA	1.620e-62	68.12	Uncharacterized protein (Fragment) n=1 Tax=Nothoph...	[more]
A0A397DXN7_9STRA	6.450e-61	65.22	Uncharacterized protein n=2 Tax=Aphanomyces astaci...	[more]
A0A067C837_SAPPC	2.010e-60	64.83	Uncharacterized protein n=2 Tax=Saprolegnia TaxID=...	[more]
A0A5D6Y833_9STRA	1.110e-59	66.67	Uncharacterized protein n=1 Tax=Pythium brassicum ...	[more]
A0A2D4C046_PYTIN	1.890e-59	66.67	Uncharacterized protein n=1 Tax=Pythium insidiosum...	[more]
W4GM18_9STRA	2.580e-57	65.22	Uncharacterized protein n=9 Tax=Aphanomyces astaci...	[more]
A0A6U0WUQ8_9STRA	1.430e-54	63.77	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A0P1ADA4_PLAHL	1.370e-53	66.12	CRN-like protein n=1 Tax=Plasmopara halstedii TaxI...	[more]
A0A484DVV8_BRELC	2.370e-52	61.59	Uncharacterized protein n=1 Tax=Bremia lactucae Ta...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig10422	contig	P-wetherbeei_contig10422:1452..2347 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	0
Start	0
Seed ortholog	112098.XP_008618178.1
PFAMs	DMRL_synthase,EF-hand_1,EF-hand_5,EF-hand_6,EF-hand_7,EF-hand_8,Pkinase_Tyr
Model size	435
Max annot lvl	2759\|Eukaryota
Hectar predicted targeting category	signal peptide
Exons	2
Evalue	9.12e-61
EggNOG OGs	KOG0032@1\|root,KOG0032@2759\|Eukaryota
Description	protein serine/threonine kinase activity
Cds size	435
COG category	T

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1683185868.7394102-CDS-P-wetherbeei_contig10422:1451..1673	1683185868.7394102-CDS-P-wetherbeei_contig10422:1451..1673	Phaeothamnion wetherbeei SAG_119_79	CDS	P-wetherbeei_contig10422 1452..1673 +
1683185868.7504795-CDS-P-wetherbeei_contig10422:2134..2347	1683185868.7504795-CDS-P-wetherbeei_contig10422:2134..2347	Phaeothamnion wetherbeei SAG_119_79	CDS	P-wetherbeei_contig10422 2135..2347 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig10422.3.1	prot_P-wetherbeei_contig10422.3.1	Phaeothamnion wetherbeei SAG_119_79	polypeptide	P-wetherbeei_contig10422 1452..2347 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-wetherbeei_contig10422:1452..2347+
coding sequence from alignment at P-wetherbeei_contig10422:1452..2347+

protein sequence of mRNA_P-wetherbeei_contig10422.3.1

>prot_P-wetherbeei_contig10422.3.1 ID=prot_P-wetherbeei_contig10422.3.1|Name=mRNA_P-wetherbeei_contig10422.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=145bp
QGVPSARRAQLILLAFALLDVDKSGVVDLDDIRRRYDTSKHPDVIAGRKK
PDEVLREFLDTFDGGENDGKVSPQEFAKYYATVSASIDDDDYFELMMRNA
WHISGGEGWSANSTCRRLLVTHADGRQTVEAPTHDLGITPAANAA

mRNA from alignment at P-wetherbeei_contig10422:1452..2347+

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-wetherbeei_contig10422.3.1 ID=mRNA_P-wetherbeei_contig10422.3.1|Name=mRNA_P-wetherbeei_contig10422.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=896bp|location=Sequence derived from alignment at P-wetherbeei_contig10422:1452..2347+ (Phaeothamnion wetherbeei SAG_119_79)
CAGGGCGTCCCGAGCGCGCGGCGGGCGCAACTGATCCTGCTGGCGTTCGC
GCTGCTGGACGTGGACAAGAGCGGCGTGGTGGACCTCGACGACATCCGGC
GGCGCTACGACACCTCCAAGCACCCGGATGTGATTGCGGGCCGCAAGAAG
CCGGACGAGGTCCTGCGGGAGTTCCTCGACACGTTCGATGGCGGCGAGAA
TGACGGCAAGGTCTCACCGCAGGTCAGTTCCCTGTTTCGAGAGATGTCCG
GCAAGGGCTGAGCTGGGCAGGTTCCTCTAGAAGGCGGGAATGAGCCAATG
CCGGCGGCGACGGTGGCGGCGGCGCGATTGCGAGATTTGGCAATGGCGAG
GCCGCAACAGCAGCTGGGTTGCATAGGGAAAGATGAAGGCGGTTTGGGGT
TTCAGGAGACATGCAGAGATGAGCCAATGCCGGCGCCGACGGTGGCGGCG
GCGCGACGGCGGGATTTGGCAATGGCGAGGTCGCAACAGCAGCTGGGCTG
CATAGGGAAAGATGAAGGCGGTTTTGGGGTTCAGGAGACATGCAGAGATG
AAGGCGGCTGCGGCGGTAGCGGCTGCAATTATCAGTGCCGTTGGTTGAGG
CAGATGTTCTCGGGAACGGAAAGACCGTACGTGCTTTGCTTTCTTCTCAC
AAGTACGGGAACATAACATTTCGTCCTTGGCAGGAGTTCGCCAAGTACTA
CGCTACTGTGTCTGCGTCCATCGACGACGACGACTACTTCGAGCTGATGA
TGCGCAATGCGTGGCACATCTCGGGCGGCGAGGGCTGGTCGGCCAACTCG
ACATGCCGCCGCCTGCTCGTGACGCACGCCGACGGCCGCCAGACGGTCGA
GGCGCCCACCCACGACCTCGGCATCACCCCCGCTGCCAACGCCGCC

Coding sequence (CDS) from alignment at P-wetherbeei_contig10422:1452..2347+

>mRNA_P-wetherbeei_contig10422.3.1 ID=mRNA_P-wetherbeei_contig10422.3.1|Name=mRNA_P-wetherbeei_contig10422.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=435bp|location=Sequence derived from alignment at P-wetherbeei_contig10422:1452..2347+ (Phaeothamnion wetherbeei SAG_119_79)
CAGGGCGTCCCGAGCGCGCGGCGGGCGCAACTGATCCTGCTGGCGTTCGC
GCTGCTGGACGTGGACAAGAGCGGCGTGGTGGACCTCGACGACATCCGGC
GGCGCTACGACACCTCCAAGCACCCGGATGTGATTGCGGGCCGCAAGAAG
CCGGACGAGGTCCTGCGGGAGTTCCTCGACACGTTCGATGGCGGCGAGAA
TGACGGCAAGGTCTCACCGCAGGAGTTCGCCAAGTACTACGCTACTGTGT
CTGCGTCCATCGACGACGACGACTACTTCGAGCTGATGATGCGCAATGCG
TGGCACATCTCGGGCGGCGAGGGCTGGTCGGCCAACTCGACATGCCGCCG
CCTGCTCGTGACGCACGCCGACGGCCGCCAGACGGTCGAGGCGCCCACCC
ACGACCTCGGCATCACCCCCGCTGCCAACGCCGCC