|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Stop | 0 |
Start | 0 |
Seed ortholog | 81824.XP_001746546.1 |
PFAMs | Ins145_P3_rec,Ion_trans,MIR,RIH_assoc,RYDR_ITPR |
Model size | 2729 |
Max annot lvl | 33154|Opisthokonta |
KEGG ko | ko:K04960 |
KEGG TC | 1.A.3.2 |
KEGG Pathway | ko04020,ko04022,ko04070,ko04114,ko04210,ko04218,ko04270,ko04371,ko04540,ko04611,ko04621,ko04713,ko04720,ko04723,ko04724,ko04725,ko04726,ko04728,ko04730,ko04742,ko04750,ko04911,ko04912,ko04915,ko04918,ko04921,ko04922,ko04924,ko04925,ko04927,ko04934,ko04970,ko04971,ko04972,ko05010,ko05167,ko05205,map04020,map04022,map04070,map04114,map04210,map04218,map04270,map04371,map04540,map04611,map04621,map04713,map04720,map04723,map04724,map04725,map04726,map04728,map04730,map04742,map04750,map04911,map04912,map04915,map04918,map04921,map04922,map04924,map04925,map04927,map04934,map04970,map04971,map04972,map05010,map05167,map05205 |
Hectar predicted targeting category | other localisation |
Exons | 7 |
Evalue | 0.000932 |
EggNOG OGs | KOG3533@1|root,KOG3533@2759|Eukaryota,38HX6@33154|Opisthokonta |
Description | inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity |
Cds size | 2727 |
COG category | T |
BRITE | ko00000,ko00001,ko01009,ko04040 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1683185868.6540818-CDS-P-wetherbeei_contig1042:3512..3845 | 1683185868.6540818-CDS-P-wetherbeei_contig1042:3512..3845 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig1042 3513..3845 + |
1683185868.6642818-CDS-P-wetherbeei_contig1042:4253..4503 | 1683185868.6642818-CDS-P-wetherbeei_contig1042:4253..4503 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig1042 4254..4503 + |
1683185868.6730046-CDS-P-wetherbeei_contig1042:4833..4970 | 1683185868.6730046-CDS-P-wetherbeei_contig1042:4833..4970 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig1042 4834..4970 + |
1683185868.682139-CDS-P-wetherbeei_contig1042:5300..5399 | 1683185868.682139-CDS-P-wetherbeei_contig1042:5300..5399 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig1042 5301..5399 + |
1683185868.6917834-CDS-P-wetherbeei_contig1042:5650..5745 | 1683185868.6917834-CDS-P-wetherbeei_contig1042:5650..5745 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig1042 5651..5745 + |
1683185868.7027617-CDS-P-wetherbeei_contig1042:5996..6534 | 1683185868.7027617-CDS-P-wetherbeei_contig1042:5996..6534 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig1042 5997..6534 + |
1683185868.7138202-CDS-P-wetherbeei_contig1042:6784..8059 | 1683185868.7138202-CDS-P-wetherbeei_contig1042:6784..8059 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig1042 6785..8059 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1042.3.1 >prot_P-wetherbeei_contig1042.3.1 ID=prot_P-wetherbeei_contig1042.3.1|Name=mRNA_P-wetherbeei_contig1042.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=909bp
DASRGVVDAADGTEDEGFSSTNPAHGVNVSGAAPDLGKWGHFPAGSISRV CHGIQCWVSLPLSRERWSFCVSGAPRCGWDINKPEAKGPMADDAGPLEHH VLFYGDIISFQVEGDGFLACPSFYNEAIEEQTAPRTHLRSAKLVAPLPAS VANLPPPPPPPSSLLQQQALEVQQQQAAAAGAIAARGFFFPTSAGGPRRS LADVVSAVVGGAGNGAAPPPPALPPKDFMTRCAFQLLPDQAVSGAGSAPV TYGSIVRVMHYKTAYRIIASDVQVAGARTGECRALLKRAASEDDRSASLF YIMPRFSMRVEGEMVRTNDPVVFESVQFKGRQLCGPGAATSLLPRAAAAA GLAFGRSSGGDGGGGGLAGGGLFAVAAAMRAAAAAEAAGEWSEQEAMVYT SDCAYQRRGWRVLRLCERKPPISGVPGAAGGPGVGGPAAAGAAGAGGSGA SGAAVSSGGEPTAAVLARNSVYGGDFVRFLHLQEGGYLLARIDDEAERLS RVSPFSLVCKKRSRRLSRVVVPFVRAGTASAKGKGGAGGTGGGGGGGAKG GGSGGSGNCAEEAAAAASASIWQIENEKPEDGSDVEWMRGIRLRHLVTGQ YLCIREVAPADAPLLQRLAVVAGGADRCGGDGGGGGGAGDGGGGAGLPES FHGAGSAHGGGGTGISGSAHGAGAGGGDGGGGGSGAADGRESSPVRSAAA TIAARGRAALAEVSEDSPVAFVAGSGQWPEPRGPLAARAAARAAGRSASP PTAAVRGSSSPPAAARGSSPPPVLKAASPPSLRPQRPSLLDSIEEHFFRA PKDGVRAGAVPTAAPRGGAGGVAETPPPPPLLPPPSSGAASTPQDMSPEH SPARPRTPEGAAARLTERRARLVVATTSLRADPTTLFDVLPTVSEDMEGG SGGGGGGGG back to topmRNA from alignment at P-wetherbeei_contig1042:3513..8060+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-wetherbeei_contig1042.3.1 ID=mRNA_P-wetherbeei_contig1042.3.1|Name=mRNA_P-wetherbeei_contig1042.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=4548bp|location=Sequence derived from alignment at P-wetherbeei_contig1042:3513..8060+ (Phaeothamnion wetherbeei SAG_119_79) GATGCCTCCCGGGGCGTTGTTGACGCGGCTGACGGGACGGAGGACGAGGG
TTTTTCCTCCACCAATCCAGCCCATGGTGTTAACGTCTCCGGAGCCGCGC
CGGACCTTGGAAAGTGGGGTCATTTTCCTGCAGGATCCATCTCACGCGTT
TGTCATGGCATTCAGTGCTGGGTATCACTGCCGTTGAGCCGAGAAAGGTG
GAGCTTTTGCGTTTCCGGTGCACCTCGCTGCGGTTGGGACATCAACAAAC
CAGAAGCAAAGGGGCCAATGGCGGATGATGCGGGGCCGCTGGAGCATCAC
GTCCTTTTCTATGGCGACATCATCAGCTTTCAGGTTGGCTGGATGTCTAG
AGGTTGTGCTGTCCTTGTCTTTGTGTTGCGGAAGCTTCGCTGTGTGAGAT
TGTTTCGACCTTGCACTGGCCATCACAGTGGCCCACTCCCGTGACGTGTT
GCAAATCAACCGTACTCGCCAAAGGGATTTCGTTTACGTTGTCCTGTTTT
TGAGACTTTTCCCTCCTCCCTTCGTTCCTCAGACGCGTTGGCGATATCTT
CACGTAGACATCATATCACCATTTCATGCGCCGCTGTCTCCCCCCTCATA
TCGAAGGCCTGTCGCTGTTGCAAACGATCGGTCAGTGGCGGCTAACAGGT
GCATGTAAGTATCCGTTTTATCTTTTCTTGTCGCTCATTCCCTGTTGCAT
CTTTCCCTGTCAAAACATGGTGTCGCCAATGGTGCCAACAGGTGGAAGGC
GACGGCTTTTTGGCATGCCCATCCTTCTACAACGAAGCCATCGAGGAGCA
GACGGCGCCGCGGACGCACCTGCGCTCTGCCAAGCTGGTCGCGCCGCTGC
CTGCATCGGTGGCGAACCTGCCGCCGCCGCCGCCGCCGCCGTCATCGCTG
CTGCAGCAGCAGGCGCTCGAAGTGCAGCAGCAGCAGGCGGCGGCAGCGGG
GGCCATCGCAGCCCGGGGGTTCTTCTTTCCGACGTCTGCAGGTCGGACCC
TCCCTGGCTTGGGAATGCCGTTTTTGCGCGACCTGTTGTTTGAGTTGTTA
GTGTAGCAAGATATAGAAATCCGCATCCGTAGCTAAAGGCGCCAGAATAT
CTTTCGCGAGTTTCCCGCTGGATCTCAATCTCTTTGCTCCGATTGCCTCG
GTTTCACAGAGCGGGGCATTGCCTTTTTCTTTTTTAATTTCCGCTCTTTC
GTTAGTTTCACTTCATGCTTATATTGAATATGCAGAGCTTAGCCCCATAA
TTTGCAGCCTTCACAGCATGCACAGCGCAAATCAATTCACTGGTCCCGTC
TCGTTCTGTGCAAAGCTGCAGGGGGGCCGCGCCGCTCCCTGGCGGACGTC
GTGTCGGCTGTCGTGGGTGGCGCCGGCAACGGAGCCGCGCCGCCGCCGCC
GGCGCTGCCCCCGAAGGACTTTATGACCCGCTGCGCCTTCCAGCTGCTGC
CGGACCAGGTGCGATTTCTCTCTTTCGTCGGACATGAATAGGGGTAGACA
GCATTAATACAGTAACCGCAGCGAGTTCTTGGTACCGTGCGCGTGATGTG
GACCGATTGGCAGGTTCGGGCATGAATGACAGTGGTTGAACTGCCCCGTT
AAAATTGCCATTTTTAAGCTTCAGTTGTTTTCTTGCTGCCCCTCTCGCGT
CGACTTGGTAAGCTGCCGCCACGCTTCTGCCATTCGTCGGTCCGGGCATC
TACCTTCTCATTCCCCTAACCTCCGACCTAAGGATGTGTCGAAACTGATA
AACGGGGTGCTGTTGCTGGCGGCTGCGTCTGGCGGCAGGCGGTGAGCGGG
GCGGGGTCGGCGCCAGTAACGTACGGGAGCATCGTCCGCGTGATGCACTA
CAAGACGGCCTATAGAATCATCGCCAGCGACGTCCAGGTGTGTTTCGGTG
CTTACCTTTCTGATGCCGCATACTTGTTGCCATCTTGAGTATAAGAATGC
GGGTGGAGAGAATCGCCTTGCGTTTCAATATTTGTAGACCACTGGGGTGT
ATTTGAAAACTGGTTATGAGAATGCGAGAAGCCACCGCCGTGCCGGCTGG
CTGCCTGTTTCCTTAGCAGCCCCGCCTATTCCTATGCCCACTTTCGCCAA
TGGCGGGCGGGCGGGCGGACGATGCTGTGCTGCAAAAGGTCGCTGGCGCC
AGGACGGGAGAGTGCCGCGCGCTGCTGAAGCGGGCGGCAAGTGAAGACGA
CCGCAGCGCCTCCCTCTTTTACATCATGCCTCGGTGAGCAGAATCGGTCC
GGCCTCCCTGAATGCATTCCTCGTTTTTTTTAAAGGCGGAATTACCGACC
TGGCTGAACAGGTGAGCCAGGTCGGTAATTCCGAGGAGGAAAGGCGCCAC
TGTGTCCTTAGTGTGTGCGTCTTAACAGTATTCAGAAAATGGGTTTCTTC
TGCGCTTAACGAACTGCTCGTGAAACAGAAGACTTGCAGCCTTCGCTCTT
GACGGCGCCATCCATTAACCATCGTTGTCCACAGGTTTTCAATGCGTGTG
GAGGGCGAAATGGTTCGGACCAACGACCCGGTGGTCTTCGAATCGGTGCA
ATTCAAGGGGCGCCAGCTCTGCGGCCCGGGCGCCGCGACCTCCCTCCTTC
CGCGTGCCGCTGCTGCCGCCGGGTTGGCATTTGGCCGCAGCAGTGGAGGG
GACGGCGGTGGCGGCGGCTTGGCGGGCGGTGGGCTGTTTGCGGTGGCGGC
AGCGATGCGGGCAGCGGCAGCCGCCGAGGCGGCGGGCGAGTGGAGCGAGC
AGGAGGCAATGGTTTACACGTCAGACTGCGCCTACCAGCGTCGGGGCTGG
CGCGTGCTGCGATTGTGCGAGCGAAAGCCTCCCATTTCGGGTGTCCCTGG
AGCGGCCGGCGGTCCCGGCGTTGGCGGGCCCGCGGCGGCAGGTGCGGCGG
GAGCGGGAGGCAGCGGCGCGTCGGGAGCTGCGGTGAGCAGCGGAGGCGAG
CCGACAGCGGCGGTGCTGGCGCGCAACAGCGTGTACGGAGGCGATTTCGT
CCGGTTTCTTCACCTTCAAGAGGTACGAAGGAAGGAGGAGACGTCGCGAA
AAGTGTCATTTGTCCGTCGCTGGCCTTTTGATTGAGAGCAAGCTTCAGCT
TCATTCTGCATCGTCGAACCATAACTATTCTTTGCCATAATTGCAATTCT
TGACAATTCGTTCGTATGGGAATCCTGCGTGTCAAGATCTACAGTCTACG
CTCGCTGCATGTTCGGAACGTTTTTCTGCAGAACGTGTCTGAAAGCGTCT
TTCAAACTCTGACAACATTCAGGGAGGTTACCTGCTTGCCCGGATCGATG
ACGAGGCAGAGCGGCTCTCGCGCGTGTCACCGTTCAGCCTCGTCTGCAAG
AAGCGCTCTCGCCGCCTCTCGCGCGTCGTGGTGCCCTTTGTCCGCGCTGG
TACGGCTTCCGCCAAGGGCAAGGGCGGTGCCGGCGGCACCGGCGGCGGTG
GCGGCGGCGGAGCCAAAGGCGGCGGAAGCGGCGGCAGCGGGAACTGTGCG
GAGGAGGCGGCGGCGGCGGCATCGGCGTCCATCTGGCAGATCGAAAATGA
GAAGCCGGAGGATGGCAGCGACGTTGAGTGGATGCGCGGAATCCGTCTTC
GGCACCTCGTCACCGGACAGTACCTCTGCATCCGGGAGGTGGCGCCGGCC
GACGCCCCGCTGCTGCAGCGCCTGGCAGTCGTTGCCGGCGGTGCCGACAG
GTGCGGGGGTGATGGGGGCGGGGGTGGCGGTGCTGGCGATGGCGGCGGCG
GAGCCGGTCTACCCGAAAGCTTCCACGGCGCGGGCAGCGCCCACGGTGGC
GGCGGAACCGGCATCAGCGGCAGCGCTCATGGTGCCGGTGCCGGCGGGGG
TGACGGGGGTGGCGGCGGTAGTGGCGCAGCTGACGGGCGAGAAAGCTCCC
CAGTCCGATCAGCAGCCGCCACAATTGCGGCGCGCGGGAGGGCGGCGCTC
GCAGAAGTCTCCGAGGATTCTCCCGTGGCTTTTGTGGCGGGCAGTGGCCA
GTGGCCCGAACCCCGCGGCCCACTGGCGGCGCGGGCTGCGGCGCGGGCGG
CGGGGAGGTCGGCATCGCCGCCAACAGCCGCCGTTCGAGGATCTTCCTCA
CCGCCGGCGGCCGCCCGCGGATCCTCGCCGCCGCCGGTGTTGAAAGCCGC
GTCCCCTCCATCGCTTCGGCCGCAGCGACCGAGTCTGCTCGACAGTATCG
AGGAGCACTTCTTCCGGGCCCCGAAGGACGGGGTGCGTGCAGGCGCCGTC
CCAACCGCAGCACCCCGCGGAGGAGCTGGAGGAGTGGCAGAGACGCCGCC
CCCGCCGCCTCTGCTGCCGCCGCCGTCATCCGGGGCGGCGTCAACGCCGC
AGGACATGTCGCCGGAGCACAGCCCGGCACGACCGCGGACGCCAGAAGGA
GCGGCGGCGCGGCTGACGGAGAGACGAGCGCGGCTGGTTGTGGCGACGAC
CAGCCTCCGGGCCGATCCGACGACGCTCTTCGACGTGCTTCCTACGGTCA
GCGAAGATATGGAGGGTGGCAGTGGCGGCGGCGGTGGCGGCGGCGGCG back to topCoding sequence (CDS) from alignment at P-wetherbeei_contig1042:3513..8060+ >mRNA_P-wetherbeei_contig1042.3.1 ID=mRNA_P-wetherbeei_contig1042.3.1|Name=mRNA_P-wetherbeei_contig1042.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2727bp|location=Sequence derived from alignment at P-wetherbeei_contig1042:3513..8060+ (Phaeothamnion wetherbeei SAG_119_79) GATGCCTCCCGGGGCGTTGTTGACGCGGCTGACGGGACGGAGGACGAGGG TTTTTCCTCCACCAATCCAGCCCATGGTGTTAACGTCTCCGGAGCCGCGC CGGACCTTGGAAAGTGGGGTCATTTTCCTGCAGGATCCATCTCACGCGTT TGTCATGGCATTCAGTGCTGGGTATCACTGCCGTTGAGCCGAGAAAGGTG GAGCTTTTGCGTTTCCGGTGCACCTCGCTGCGGTTGGGACATCAACAAAC CAGAAGCAAAGGGGCCAATGGCGGATGATGCGGGGCCGCTGGAGCATCAC GTCCTTTTCTATGGCGACATCATCAGCTTTCAGGTGGAAGGCGACGGCTT TTTGGCATGCCCATCCTTCTACAACGAAGCCATCGAGGAGCAGACGGCGC CGCGGACGCACCTGCGCTCTGCCAAGCTGGTCGCGCCGCTGCCTGCATCG GTGGCGAACCTGCCGCCGCCGCCGCCGCCGCCGTCATCGCTGCTGCAGCA GCAGGCGCTCGAAGTGCAGCAGCAGCAGGCGGCGGCAGCGGGGGCCATCG CAGCCCGGGGGTTCTTCTTTCCGACGTCTGCAGGGGGGCCGCGCCGCTCC CTGGCGGACGTCGTGTCGGCTGTCGTGGGTGGCGCCGGCAACGGAGCCGC GCCGCCGCCGCCGGCGCTGCCCCCGAAGGACTTTATGACCCGCTGCGCCT TCCAGCTGCTGCCGGACCAGGCGGTGAGCGGGGCGGGGTCGGCGCCAGTA ACGTACGGGAGCATCGTCCGCGTGATGCACTACAAGACGGCCTATAGAAT CATCGCCAGCGACGTCCAGGTCGCTGGCGCCAGGACGGGAGAGTGCCGCG CGCTGCTGAAGCGGGCGGCAAGTGAAGACGACCGCAGCGCCTCCCTCTTT TACATCATGCCTCGGTTTTCAATGCGTGTGGAGGGCGAAATGGTTCGGAC CAACGACCCGGTGGTCTTCGAATCGGTGCAATTCAAGGGGCGCCAGCTCT GCGGCCCGGGCGCCGCGACCTCCCTCCTTCCGCGTGCCGCTGCTGCCGCC GGGTTGGCATTTGGCCGCAGCAGTGGAGGGGACGGCGGTGGCGGCGGCTT GGCGGGCGGTGGGCTGTTTGCGGTGGCGGCAGCGATGCGGGCAGCGGCAG CCGCCGAGGCGGCGGGCGAGTGGAGCGAGCAGGAGGCAATGGTTTACACG TCAGACTGCGCCTACCAGCGTCGGGGCTGGCGCGTGCTGCGATTGTGCGA GCGAAAGCCTCCCATTTCGGGTGTCCCTGGAGCGGCCGGCGGTCCCGGCG TTGGCGGGCCCGCGGCGGCAGGTGCGGCGGGAGCGGGAGGCAGCGGCGCG TCGGGAGCTGCGGTGAGCAGCGGAGGCGAGCCGACAGCGGCGGTGCTGGC GCGCAACAGCGTGTACGGAGGCGATTTCGTCCGGTTTCTTCACCTTCAAG AGGGAGGTTACCTGCTTGCCCGGATCGATGACGAGGCAGAGCGGCTCTCG CGCGTGTCACCGTTCAGCCTCGTCTGCAAGAAGCGCTCTCGCCGCCTCTC GCGCGTCGTGGTGCCCTTTGTCCGCGCTGGTACGGCTTCCGCCAAGGGCA AGGGCGGTGCCGGCGGCACCGGCGGCGGTGGCGGCGGCGGAGCCAAAGGC GGCGGAAGCGGCGGCAGCGGGAACTGTGCGGAGGAGGCGGCGGCGGCGGC ATCGGCGTCCATCTGGCAGATCGAAAATGAGAAGCCGGAGGATGGCAGCG ACGTTGAGTGGATGCGCGGAATCCGTCTTCGGCACCTCGTCACCGGACAG TACCTCTGCATCCGGGAGGTGGCGCCGGCCGACGCCCCGCTGCTGCAGCG CCTGGCAGTCGTTGCCGGCGGTGCCGACAGGTGCGGGGGTGATGGGGGCG GGGGTGGCGGTGCTGGCGATGGCGGCGGCGGAGCCGGTCTACCCGAAAGC TTCCACGGCGCGGGCAGCGCCCACGGTGGCGGCGGAACCGGCATCAGCGG CAGCGCTCATGGTGCCGGTGCCGGCGGGGGTGACGGGGGTGGCGGCGGTA GTGGCGCAGCTGACGGGCGAGAAAGCTCCCCAGTCCGATCAGCAGCCGCC ACAATTGCGGCGCGCGGGAGGGCGGCGCTCGCAGAAGTCTCCGAGGATTC TCCCGTGGCTTTTGTGGCGGGCAGTGGCCAGTGGCCCGAACCCCGCGGCC CACTGGCGGCGCGGGCTGCGGCGCGGGCGGCGGGGAGGTCGGCATCGCCG CCAACAGCCGCCGTTCGAGGATCTTCCTCACCGCCGGCGGCCGCCCGCGG ATCCTCGCCGCCGCCGGTGTTGAAAGCCGCGTCCCCTCCATCGCTTCGGC CGCAGCGACCGAGTCTGCTCGACAGTATCGAGGAGCACTTCTTCCGGGCC CCGAAGGACGGGGTGCGTGCAGGCGCCGTCCCAACCGCAGCACCCCGCGG AGGAGCTGGAGGAGTGGCAGAGACGCCGCCCCCGCCGCCTCTGCTGCCGC CGCCGTCATCCGGGGCGGCGTCAACGCCGCAGGACATGTCGCCGGAGCAC AGCCCGGCACGACCGCGGACGCCAGAAGGAGCGGCGGCGCGGCTGACGGA GAGACGAGCGCGGCTGGTTGTGGCGACGACCAGCCTCCGGGCCGATCCGA CGACGCTCTTCGACGTGCTTCCTACGGTCAGCGAAGATATGGAGGGTGGC AGTGGCGGCGGCGGTGGCGGCGGCGGC back to top
|