mRNA_P-wetherbeei_contig10415.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig10415.1.1 vs. uniprot
Match: UPI001FE68401 (exopolysaccharide biosynthesis protein n=1 Tax=Azospirillum rugosum TaxID=416170 RepID=UPI001FE68401) HSP 1 Score: 149 bits (377), Expect = 3.570e-42 Identity = 84/171 (49.12%), Postives = 116/171 (67.84%), Query Frame = 1 Query: 61 ERVRLRDLVAALDDRAFGAAMLLFALPNAVGIGTIPGVSTLFGAPQIFLAVQMILGYAQPKLPEWLLEKSIARGDFETMVDRGVPYLRRVEKFLKPRAQGLTDGVAERALGVVFLILAAIVSLPIPFGNQPPAVAMALIAMGHVARDGAFVVAGCVAGVFAIAIAGAVVAG 573 ER+ L DL+ L DRAFGA +LL ++PN + + PG+ST+ G P I + QM++G +P LP + ++ R F +V R P + R+E+ L+PR LTDG AER LG+ ++LAA+++LPI FGNQPPA A+ALIA+G + +DGAFV AG AG+ AIAI AVV G Sbjct: 7 ERIALGDLMGILGDRAFGALLLLLSIPNVLPV---PGLSTVTGLPMILIGAQMLMGLDRPWLPRRVAAATVDRDAFLRVVKRAHPTIDRLERHLRPRLPALTDGTAERLLGLAVIVLAAVLALPIVFGNQPPAFAIALIALGLIEKDGAFVAAGLAAGLVAIAIVAAVVLG 174
BLAST of mRNA_P-wetherbeei_contig10415.1.1 vs. uniprot
Match: UPI00166B44E4 (exopolysaccharide biosynthesis protein n=1 Tax=Tistrella bauzanensis TaxID=657419 RepID=UPI00166B44E4) HSP 1 Score: 150 bits (379), Expect = 4.150e-42 Identity = 85/182 (46.70%), Postives = 124/182 (68.13%), Query Frame = 1 Query: 25 SEILLALRANAP-ERVRLRDLVAALDDRAFGAAMLLFALPNAVGIGTIPGVSTLFGAPQIFLAVQMILGYAQPKLPEWLLEKSIARGDFETMVDRGVPYLRRVEKFLKPRAQGLTDGVAERALGVVFLILAAIVSLPIPFGNQPPAVAMALIAMGHVARDGAFVVAGCVAGVFAIAIAGAVV 567 S+IL L + P ER+ L+DL A + +RAFGA +LLFALPN + +G IPG+S + GAP + A+ ++LG P LP +L +S + DF + DR +P+L R E+ L+PR L DG AER +G + LIL+ ++ LPIPFGN PPA+A+A+IA+G + RDG V+ G + G+ ++ +A AVV Sbjct: 21 SDILRRLIRDWPGERISLQDLTAVMGERAFGALILLFALPNCLPLG-IPGLSAVLGAPIVPFAIGLMLGQRSPWLPAFLGRRSFRKTDFMRVFDRALPWLERAERLLRPRMTFLVDGRAERVMGFLILILSVVLVLPIPFGNNPPAIAIAVIALGLIERDGLTVIVGYLLGLLSVIVASAVV 201
BLAST of mRNA_P-wetherbeei_contig10415.1.1 vs. uniprot
Match: A0A0Q6XGE7_9BURK (ABC transporter permease n=1 Tax=Rhizobacter sp. Root1221 TaxID=1736433 RepID=A0A0Q6XGE7_9BURK) HSP 1 Score: 146 bits (368), Expect = 1.260e-40 Identity = 87/202 (43.07%), Postives = 129/202 (63.86%), Query Frame = 1 Query: 10 NARSFSEILLALRANAPE-RVRLRDLVAALDDRAFGAAMLLFALPNAVGIGTIPGVSTLFGAPQIFLAVQMILGYAQPKLPEWLLEKSIARGDFETMVDRGVPYLRRVEKFLKPRAQGLTDGVAERALGVVFLILAAIVSLPIPFGNQPPAVAMALIAMGHVARDGAFVVAGCVAGVFAIAIAGAVVAGGAAVVWLAVTHLF 612 + R S++L + ++ R+ + L+ ALDDRA A +L+FALPNA+ + PG S++ G P +FL Q+ LG + P LP+++ ++S+AR DF +V R P+L R E+ LKPR +T V ER +G+V L+LA I+ LPIPFGN PA A++L+A+G + RDG +V+AG V AIA+ V+AG L + HLF Sbjct: 5 SGRPLSDVLFEIASDTTRPRISIGQLLRALDDRALAALLLIFALPNAIPMP--PGTSSVLGTPLVFLTAQLALGLS-PWLPQFIAKRSVARTDFAAIVVRLAPWLARAERLLKPRLLWITSPVGERVIGLVCLLLAVILVLPIPFGNMLPAAAISLMALGVLERDGVWVIAGLATTVAAIALVAGVLAGMLKAAMLVIAHLF 203
BLAST of mRNA_P-wetherbeei_contig10415.1.1 vs. uniprot
Match: A0A2T6FIT6_9GAMM (Polysaccharide synthesis protein exod n=1 Tax=Cellvibrio sp. 79 TaxID=1954207 RepID=A0A2T6FIT6_9GAMM) HSP 1 Score: 146 bits (369), Expect = 1.330e-40 Identity = 77/161 (47.83%), Postives = 112/161 (69.57%), Query Frame = 1 Query: 61 ERVRLRDLVAALDDRAFGAAMLLFALPNAVGIGTIPGVSTLFGAPQIFLAVQMILGYAQPKLPEWLLEKSIARGDFETMVDRGVPYLRRVEKFLKPRAQGLTDGVAERALGVVFLILAAIVSLPIPFGNQPPAVAMALIAMGHVARDGAFVVAGCVAGVFA 543 ERVR+RD+ +L R+FG +L+FALPN++ I IPGVST+ G P +F+AVQM LG+ + LP W+ + S++ F+T++ + VP+LRR+EK +KPR LT+G AER LG ++LA +++LPIP GN PA+ + IA+G + DG V+AG GV A Sbjct: 34 ERVRVRDITESLGQRSFGFILLIFALPNSLPIIGIPGVSTITGLPMLFVAVQMALGHQRVYLPRWIADSSLSTASFQTLIRKSVPWLRRIEKLMKPRIGFLTNGKAERWLGAFCVLLAFLLALPIPLGNLLPALGILFIALGLIESDGVCVLAGLSIGVAA 194
BLAST of mRNA_P-wetherbeei_contig10415.1.1 vs. uniprot
Match: A0A3D4Q4Y3_9GAMM (Polysaccharide synthesis protein exod n=1 Tax=Cellvibrio sp. TaxID=1965322 RepID=A0A3D4Q4Y3_9GAMM) HSP 1 Score: 145 bits (365), Expect = 5.290e-40 Identity = 80/176 (45.45%), Postives = 116/176 (65.91%), Query Frame = 1 Query: 19 SFSEILLALRANA-PERVRLRDLVAALDDRAFGAAMLLFALPNAVGIGTIPGVSTLFGAPQIFLAVQMILGYAQPKLPEWLLEKSIARGDFETMVDRGVPYLRRVEKFLKPRAQGLTDGVAERALGVVFLILAAIVSLPIPFGNQPPAVAMALIAMGHVARDGAFVVAGCVAGVFA 543 S S +LL AN ERVR+RD+ +L R+FG +L+FALPN++ I IPGVST+ G P +F+AVQM LG+ + LP W+ + S+A DF+ ++++ P+LRR+EK ++PR LT G AER LG ++LA ++ LPIP GN PA+ + IA+G + DG V+ G G+ A Sbjct: 19 SLSSLLLDFAANFHTERVRVRDITESLGQRSFGFILLIFALPNSLPILGIPGVSTITGMPMLFVAVQMALGHQRVYLPRWIADSSLATADFQKLINKVAPWLRRIEKLMRPRIAILTLGSAERWLGAFCVLLAVLLVLPIPLGNLLPALGILFIALGLIESDGVCVLVGIAIGIAA 194
BLAST of mRNA_P-wetherbeei_contig10415.1.1 vs. uniprot
Match: A0A4R2LRU6_9GAMM (Uncharacterized protein n=1 Tax=Plasticicumulans lactativorans TaxID=1133106 RepID=A0A4R2LRU6_9GAMM) HSP 1 Score: 144 bits (364), Expect = 5.630e-40 Identity = 81/168 (48.21%), Postives = 118/168 (70.24%), Query Frame = 1 Query: 61 ERVRLRDLVAALDDRAFGAAMLLFALPNAVGIGTIPGVSTLFGAPQIFLAVQMILGYAQPKLPEWLLEKSIARGDFETMVDRGVPYLRRVEKFLKPRAQGLTDGVAERALGVVFLILAAIVSLPIPFGNQPPAVAMALIAMGHVARDGAFVVAGCVAGVFAIAIAGAV 564 ERVRL DLV+ L +R+FG +LLFA+PN V + PG ST+FG P + +++QM+LG+ P +P W LE+SIAR F M+D+ +P +R +E++L+PRA T AER LG + A +++LP+P N PPA+ + L+A+G + RDG V+AGCVAG+ ++AIA AV Sbjct: 27 ERVRLGDLVSLLGNRSFGILLLLFAMPNLVPLP--PGSSTVFGIPLMLVSLQMMLGWPTPWMPRWALERSIARNVFVGMLDKVLPRIRWLERWLRPRAVHWTGLRAERVLGGYCALQAFVLALPLPLANLPPALTIVLVALGLMERDGLLVMAGCVAGLLSLAIASAV 192
BLAST of mRNA_P-wetherbeei_contig10415.1.1 vs. uniprot
Match: A0A3B9IFN6_9PROT (ABC transporter permease n=5 Tax=Tistrella TaxID=171436 RepID=A0A3B9IFN6_9PROT) HSP 1 Score: 145 bits (366), Expect = 7.680e-40 Identity = 82/182 (45.05%), Postives = 123/182 (67.58%), Query Frame = 1 Query: 25 SEILLALRANAP-ERVRLRDLVAALDDRAFGAAMLLFALPNAVGIGTIPGVSTLFGAPQIFLAVQMILGYAQPKLPEWLLEKSIARGDFETMVDRGVPYLRRVEKFLKPRAQGLTDGVAERALGVVFLILAAIVSLPIPFGNQPPAVAMALIAMGHVARDGAFVVAGCVAGVFAIAIAGAVV 567 S++L L + P ER+ L DL + DRAF A +LLFALPN + +G IPG+S + GAP + A+ ++LG P LP +L +S + DF + ++ +P+L +VE+ LKPR + +G AER LGV+ +IL+ ++ LPIPFGN PPA+A+++IA+G + RDG V+ G V G+ + A+A AVV Sbjct: 47 SDVLKRLIRDWPGERISLHDLTTVMGDRAFAALILLFALPNCLPLG-IPGLSAVLGAPIVPFAIGLMLGQRSPWLPAFLARRSFRKTDFMMVFNKALPWLEKVERLLKPRCAWVIEGKAERLLGVIMVILSIVLVLPIPFGNNPPAIAISVIALGLIERDGLTVLIGYVLGLLSCALAAAVV 227
BLAST of mRNA_P-wetherbeei_contig10415.1.1 vs. uniprot
Match: UPI00115DDA96 (exopolysaccharide biosynthesis protein n=1 Tax=Telmatospirillum sp. J64-1 TaxID=2502183 RepID=UPI00115DDA96) HSP 1 Score: 145 bits (365), Expect = 7.820e-40 Identity = 76/167 (45.51%), Postives = 110/167 (65.87%), Query Frame = 1 Query: 64 RVRLRDLVAALDDRAFGAAMLLFALPNAVGIGTIPGVSTLFGAPQIFLAVQMILGYAQPKLPEWLLEKSIARGDFETMVDRGVPYLRRVEKFLKPRAQGLTDGVAERALGVVFLILAAIVSLPIPFGNQPPAVAMALIAMGHVARDGAFVVAGCVAGVFAIAIAGAV 564 R+ L + AAL DRA+G LLFA PN PG+S + G P I +A Q + G QP P WL E+SIAR DF +++RG+P+L RVE+ LKPR T AER + ++ L+LA +++LPIPFGN PA+A+++IA+G RDG FV+ G + G+ ++ +AG++ Sbjct: 51 RITLGAVAAALGDRAYGILFLLFAFPNVFPAP--PGMSAVLGMPLILVAAQFVYGRHQPWFPRWLAERSIAREDFALIIERGIPWLHRVERLLKPRLLWATHFSAERTISLLCLVLAVVIALPIPFGNMLPALAISVIALGFFERDGVFVLGGAILGILSLVLAGSI 215
BLAST of mRNA_P-wetherbeei_contig10415.1.1 vs. uniprot
Match: UPI001FEB1D6D (exopolysaccharide biosynthesis protein n=1 Tax=Azospirillum soli TaxID=1304799 RepID=UPI001FEB1D6D) HSP 1 Score: 143 bits (361), Expect = 1.060e-39 Identity = 83/170 (48.82%), Postives = 112/170 (65.88%), Query Frame = 1 Query: 64 RVRLRDLVAALDDRAFGAAMLLFALPNAVGIGTIPGVSTLFGAPQIFLAVQMILGYAQPKLPEWLLEKSIARGDFETMVDRGVPYLRRVEKFLKPRAQGLTDGVAERALGVVFLILAAIVSLPIPFGNQPPAVAMALIAMGHVARDGAFVVAGCVAGVFAIAIAGAVVAG 573 R+ L DL+ L DRAFGA +L+ ++PN + + PG+ST G P I + QM G QP LP + ++ R F +V+R PY+ RVE+ L R LTD VAER LG+ + LA +++LPI FGNQPPA A+ALIA+G + +DGAFV+AG VAG+ AIAI AV+ G Sbjct: 13 RIALGDLMGILGDRAFGALLLILSIPNVLPV---PGLSTATGLPMILIGAQMAAGRHQPWLPRRVAAATVDRDSFLRVVNRAQPYIHRVERHLHERLPMLTDPVAERLLGLAVMALALVLALPIVFGNQPPAFAIALIALGLIEKDGAFVIAGLVAGLVAIAIVAAVLLG 179
BLAST of mRNA_P-wetherbeei_contig10415.1.1 vs. uniprot
Match: UPI001FE94137 (exopolysaccharide biosynthesis protein n=1 Tax=Azospirillum picis TaxID=488438 RepID=UPI001FE94137) HSP 1 Score: 143 bits (361), Expect = 1.500e-39 Identity = 82/172 (47.67%), Postives = 113/172 (65.70%), Query Frame = 1 Query: 58 PERVRLRDLVAALDDRAFGAAMLLFALPNAVGIGTIPGVSTLFGAPQIFLAVQMILGYAQPKLPEWLLEKSIARGDFETMVDRGVPYLRRVEKFLKPRAQGLTDGVAERALGVVFLILAAIVSLPIPFGNQPPAVAMALIAMGHVARDGAFVVAGCVAGVFAIAIAGAVVAG 573 P+R+ L +++ AL DRAFG +L+ ++PN + + PG+ST G P I + QM LG QP LP +L RG F ++ R P+ R+E+ L+PR L AER LGV ++LA I++LPI FGNQPPA+A+ALIA+G + DGAFVVAG +AGV +IAI AV+ G Sbjct: 23 PDRISLAEVMDALGDRAFGTLLLILSIPNVLPV---PGLSTATGVPMILIGAQMALGRPQPWLPRRMLAVGFDRGAFLGVIRRAKPWADRLERHLRPRLPALAGPAAERMLGVAVMLLAGILALPIVFGNQPPALAIALIALGLMESDGAFVVAGLIAGVLSIAIIAAVLLG 191 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10415.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig10415.1.1 >prot_P-wetherbeei_contig10415.1.1 ID=prot_P-wetherbeei_contig10415.1.1|Name=mRNA_P-wetherbeei_contig10415.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=207bp MTANARSFSEILLALRANAPERVRLRDLVAALDDRAFGAAMLLFALPNAVback to top mRNA from alignment at P-wetherbeei_contig10415:665..1285+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig10415.1.1 ID=mRNA_P-wetherbeei_contig10415.1.1|Name=mRNA_P-wetherbeei_contig10415.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=621bp|location=Sequence derived from alignment at P-wetherbeei_contig10415:665..1285+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig10415:665..1285+ >mRNA_P-wetherbeei_contig10415.1.1 ID=mRNA_P-wetherbeei_contig10415.1.1|Name=mRNA_P-wetherbeei_contig10415.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=621bp|location=Sequence derived from alignment at P-wetherbeei_contig10415:665..1285+ (Phaeothamnion wetherbeei SAG_119_79)back to top |