mRNA_P-wetherbeei_contig10406.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig10406.1.1
Unique NamemRNA_P-wetherbeei_contig10406.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig10406.1.1 vs. uniprot
Match: K3WQ09_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WQ09_GLOUD)

HSP 1 Score: 282 bits (722), Expect = 8.720e-88
Identity = 137/240 (57.08%), Postives = 174/240 (72.50%), Query Frame = 1
Query:    7 QATPSTLDNWYLFCRPEEKLGLLVRFLQRQKACKVIVFLATCASVDFFSKVLGQLSPMRRHGIPVLALHGQLAQKKRVAAYERFLALPAGVLGCTDVAARGVDIPDVHWIVQYDAPTDPAFFVHRVGRTARAGRSGRSLTLLQPEEDAYVEFLALRKVPMHAMDDAQACAEIWDPYPEVKRMVRADRDLLEKGTRAFISFLRDYKEHHCQFIFRFAHLDLGAIARAFALLRLPKMPELRD 726
            Q TPSTL N+Y     E++L  L  FLQ +K  K+IVF +TC++VDFFS+VL           P++ALHG++ QKKR   Y+RF+AL +G+L CTDV ARG+D+PDV WI+QYD P DP FFVHRVGRTARAGR+G +++ L   EDAYV FL +RKVP   M       EI D  P+VK ++ +DRD+LEKGT+A+ISF+R YKEH CQFIFRF  LDLGA+AR FAL +LPK+ ELR+
Sbjct:  233 QITPSTLKNFYALVSHEQRLSALYHFLQSKKTQKMIVFFSTCSAVDFFSRVLEHFYEKEADEFPIVALHGKMPQKKRTTNYDRFVALKSGILVCTDVVARGIDLPDVDWIIQYDPPQDPNFFVHRVGRTARAGRTGSAISFLSANEDAYVNFLKIRKVPCEEMK--LPLDEIEDMLPKVKELILSDRDILEKGTKAYISFVRSYKEHQCQFIFRFKELDLGAVARGFALFKLPKINELRN 470          
BLAST of mRNA_P-wetherbeei_contig10406.1.1 vs. uniprot
Match: A0A8K1CU56_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CU56_PYTOL)

HSP 1 Score: 274 bits (700), Expect = 1.560e-84
Identity = 141/240 (58.75%), Postives = 171/240 (71.25%), Query Frame = 1
Query:    7 QATPSTLDNWYLFCRPEEKLGLLVRFLQRQKACKVIVFLATCASVDFFSKVLGQLSPMRRHGIPVLALHGQLAQKKRVAAYERFLALPAGVLGCTDVAARGVDIPDVHWIVQYDAPTDPAFFVHRVGRTARAGRSGRSLTLLQPEEDAYVEFLALRKVPMHAMDDAQACAEIWDPYPEVKRMVRADRDLLEKGTRAFISFLRDYKEHHCQFIFRFAHLDLGAIARAFALLRLPKMPELRD 726
            Q  PSTLDN+Y     E++L  L  FL+ +K  KVIVF +TC++VD+FS+VL  L    +   PV+ALHG++AQKKR   YE F+ L AG+L CTDV ARG+D+PD+ WIVQYD P DP FFVHR+GRTARAGRSG +L+ L   EDAYV FL +RKVP   +       E  D  P +K+ V  DRDLLEKGT AFISF+R YKEH CQFIFRF  LDLGA AR FALL+LPK+ ELR+
Sbjct:  233 QIIPSTLDNFYAIVGHEQRLSALHHFLKDKKEQKVIVFFSTCSAVDYFSRVLEMLYEKEKT-FPVVALHGKMAQKKRTKNYESFVELNAGMLVCTDVVARGIDLPDIDWIVQYDPPQDPNFFVHRIGRTARAGRSGSALSFLSANEDAYVNFLQIRKVPCQELSLPLETME--DVLPRLKKWVLEDRDLLEKGTNAFISFVRSYKEHQCQFIFRFKDLDLGAAARGFALLKLPKINELRN 469          
BLAST of mRNA_P-wetherbeei_contig10406.1.1 vs. uniprot
Match: A0A835YKT0_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKT0_9STRA)

HSP 1 Score: 272 bits (696), Expect = 2.610e-84
Identity = 143/248 (57.66%), Postives = 176/248 (70.97%), Query Frame = 1
Query:    7 QATPSTLDNWYLFCRPEEKLGLLVRFLQRQKACKVIVFLATCASVDFFSKVLGQLSPMRRH-----GIPV-LALHGQLAQKKRVAAYERFLALPAGVLGCTDVAARGVDIPDVHWIVQYDAPTDPAFFVHRVGRTARAGRSGRSLTLLQPEEDAYVEFLALRKVPMHAM---DDAQACAEIWDPYPEVKRMVRADRDLLEKGTRAFISFLRDYKEHHCQFIFRFAHLDLGAIARAFALLRLPKMPELR 723
            QATPS+L N++L   P+ KLG LVRFL+R+   KVIVF  TCA VD+   +L       R        PV LALHG++ QK+R   ++ F+A PAGVL CTDVAARG+D+PDV WIVQY+ P DP FF+HRVGR ARAGR G+S++ L P+ED+Y+EFLALR+ P  A    +DA   A         + +VRADRDLLEKGTRAF++F+R YKEH CQFIFRFA LDLGA+A  FALLRLPKM EL+
Sbjct:  237 QATPSSLRNYHLTVAPQRKLGALVRFLRRRPDAKVIVFTMTCAGVDYLGGLLXXXXXXXRXXGGAAAAPVVLALHGKMVQKRRSGVFDAFVAAPAGVLMCTDVAARGIDVPDVDWIVQYEPPQDPNFFIHRVGRAARAGRRGQSVSFLLPQEDSYIEFLALRRSPQEAARRGEDALVLAR-------ARELVRADRDLLEKGTRAFVAFVRAYKEHQCQFIFRFAALDLGAMATGFALLRLPKMAELK 477          
BLAST of mRNA_P-wetherbeei_contig10406.1.1 vs. uniprot
Match: H3G5E4_PHYRM (Uncharacterized protein n=4 Tax=Peronosporaceae TaxID=4777 RepID=H3G5E4_PHYRM)

HSP 1 Score: 270 bits (690), Expect = 5.710e-84
Identity = 137/240 (57.08%), Postives = 170/240 (70.83%), Query Frame = 1
Query:    7 QATPSTLDNWYLFCRPEEKLGLLVRFLQRQKACKVIVFLATCASVDFFSKVLGQLSPMRRHGIPVLALHGQLAQKKRVAAYERFLALPAGVLGCTDVAARGVDIPDVHWIVQYDAPTDPAFFVHRVGRTARAGRSGRSLTLLQPEEDAYVEFLALRKVPMHAMDDAQACAEIWDPYPEVKRMVRADRDLLEKGTRAFISFLRDYKEHHCQFIFRFAHLDLGAIARAFALLRLPKMPELRD 726
            Q TP+TL N+Y     +++L  L  F+Q +K  K+IVF +TC SVDFF++VL +L       IPV+ LHG++ QKKR   Y+RF +L +G+L CTDV ARG+D+PDV WIVQYD P DP FFVHRVGRTARAGRSG +L+ L   EDAYV FL +RKVP   M       E  D  P VK  +  DRDLLEKGT+AF++F+R YKEH CQFIFRF  LDLGA+AR F LL+LPK+ ELR+
Sbjct:  232 QVTPTTLQNYYCLVGHDQRLSALHHFVQSKKGQKLIVFFSTCGSVDFFTRVLEELFK-GDEAIPVVGLHGKMPQKKRTTNYDRFSSLESGLLVCTDVVARGIDLPDVDWIVQYDPPQDPNFFVHRVGRTARAGRSGCALSFLSSNEDAYVNFLKIRKVPCEEMTLPLDTME--DVLPNVKSFILEDRDLLEKGTKAFMAFVRSYKEHQCQFIFRFKELDLGAVARGFCLLQLPKINELRN 468          
BLAST of mRNA_P-wetherbeei_contig10406.1.1 vs. uniprot
Match: A0A5D6Y4E8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y4E8_9STRA)

HSP 1 Score: 271 bits (692), Expect = 3.140e-83
Identity = 136/241 (56.43%), Postives = 173/241 (71.78%), Query Frame = 1
Query:    7 QATPSTLDNWYLFCRPEEKLGLLVRFLQRQKACKVIVFLATCASVDFFSKVLGQL-SPMRRHGIPVLALHGQLAQKKRVAAYERFLALPAGVLGCTDVAARGVDIPDVHWIVQYDAPTDPAFFVHRVGRTARAGRSGRSLTLLQPEEDAYVEFLALRKVPMHAMDDAQACAEIWDPYPEVKRMVRADRDLLEKGTRAFISFLRDYKEHHCQFIFRFAHLDLGAIARAFALLRLPKMPELRD 726
            Q  P+TL N+Y     E++L  L+ FLQ ++  K+IVF +TC++VDFF +V+  L +      +PV+ LHG++ QKKR   Y+RF+AL +G+L CTDV ARG+D+PDV WI+QYD P DP FFVHRVGRTARAGRSG +++ L   EDAYV FL +RKVP   +  A     I D  P VK +V  DRD+LEKGT+AFISF+R YKEH CQFIFRF  LDLGA AR FALL+LPK+ ELR+
Sbjct:  233 QVIPTTLRNYYAIVGHEQRLSALLHFLQTKQDQKLIVFFSTCSAVDFFGRVVEHLLAETAGSALPVVPLHGKMPQKKRTTNYDRFVALASGLLVCTDVVARGIDLPDVDWIIQYDPPQDPNFFVHRVGRTARAGRSGSAISFLSSNEDAYVNFLRIRKVPCEEL--ALPLDAIEDVLPRVKALVLGDRDVLEKGTKAFISFVRSYKEHQCQFIFRFKELDLGAAARGFALLKLPKINELRN 471          
BLAST of mRNA_P-wetherbeei_contig10406.1.1 vs. uniprot
Match: A0A2D4C6T9_PYTIN (DEAD/DEAH box RNA helicase, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C6T9_PYTIN)

HSP 1 Score: 270 bits (691), Expect = 3.490e-83
Identity = 135/240 (56.25%), Postives = 169/240 (70.42%), Query Frame = 1
Query:    7 QATPSTLDNWYLFCRPEEKLGLLVRFLQRQKACKVIVFLATCASVDFFSKVLGQLSPMRRHGIPVLALHGQLAQKKRVAAYERFLALPAGVLGCTDVAARGVDIPDVHWIVQYDAPTDPAFFVHRVGRTARAGRSGRSLTLLQPEEDAYVEFLALRKVPMHAMDDAQACAEIWDPYPEVKRMVRADRDLLEKGTRAFISFLRDYKEHHCQFIFRFAHLDLGAIARAFALLRLPKMPELRD 726
            Q  PSTLDN+Y     +++L  L  FL  ++  K IVF +TC++VDFF +VL  L    +   PV+ALHG++ QKKR   YERF+ + AG+L CTDV ARG+D+PDV WIVQYD P DP FFVHR+GRTARAGRSG +L+ L   EDAYV FL +RKVP   +       E  D  P +K  + +DRDLLEKGT+AFISF+R YKEH CQFIFRF  LDL ++AR F+LL+LPK+ ELRD
Sbjct:  233 QIIPSTLDNFYAIVEHDQRLSALHHFLSDKRDRKAIVFFSTCSAVDFFGRVLELLYEGDKDQFPVVALHGKMPQKKRTRHYERFVEMSAGLLVCTDVVARGIDLPDVDWIVQYDPPQDPNFFVHRIGRTARAGRSGSALSFLSANEDAYVNFLKIRKVPCQELSLPVDSME--DVLPRLKSWILSDRDLLEKGTKAFISFVRSYKEHQCQFIFRFKDLDLASVARGFSLLKLPKINELRD 470          
BLAST of mRNA_P-wetherbeei_contig10406.1.1 vs. uniprot
Match: D0MY83_PHYIT (DEAD/DEAH box RNA helicase, putative n=26 Tax=Phytophthora TaxID=4783 RepID=D0MY83_PHYIT)

HSP 1 Score: 270 bits (690), Expect = 3.700e-83
Identity = 138/240 (57.50%), Postives = 171/240 (71.25%), Query Frame = 1
Query:    7 QATPSTLDNWYLFCRPEEKLGLLVRFLQRQKACKVIVFLATCASVDFFSKVLGQLSPMRRHGIPVLALHGQLAQKKRVAAYERFLALPAGVLGCTDVAARGVDIPDVHWIVQYDAPTDPAFFVHRVGRTARAGRSGRSLTLLQPEEDAYVEFLALRKVPMHAMDDAQACAEIWDPYPEVKRMVRADRDLLEKGTRAFISFLRDYKEHHCQFIFRFAHLDLGAIARAFALLRLPKMPELRD 726
            Q TP+TL N+Y     +++L  L  F+Q +K  K+IVF +TC SVDFFS+VL +L    ++  PV+ALHG++ QKKR   Y+ F AL +G+L CTDV ARG+D+PDV WIVQYD P DP FFVHRVGRTARAGRSG +L+ L   EDAYV FL +RKVP   M       E  D  P+VK  +  DRDLLEKGT+AF++F+R YKEH CQFIFRF  LDLGA AR F LL+LPK+ ELR+
Sbjct:  234 QITPATLQNYYCLVGHDQRLSALHHFVQAKKGEKLIVFFSTCGSVDFFSRVLEELFK-GKNDFPVVALHGKMPQKKRTTNYDHFSALKSGLLVCTDVVARGIDLPDVDWIVQYDPPQDPNFFVHRVGRTARAGRSGCALSFLSSNEDAYVNFLKIRKVPCEEMTLPLDTME--DVLPKVKSFILEDRDLLEKGTKAFMAFVRSYKEHQCQFIFRFKELDLGAAARGFCLLQLPKINELRN 470          
BLAST of mRNA_P-wetherbeei_contig10406.1.1 vs. uniprot
Match: A0A1V9Y6I3_9STRA (DEAD/DEAH box RNA helicase (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y6I3_9STRA)

HSP 1 Score: 263 bits (671), Expect = 1.550e-82
Identity = 139/243 (57.20%), Postives = 166/243 (68.31%), Query Frame = 1
Query:    7 QATPSTLDNWYLFCRPEEKLGLLVRFLQRQKACKVIVFLATCASVDFFSKVLGQLSPMRRHGIPVLALHGQLAQKKRVAAYERFLALPAGVLGCTDVAARGVDIPDVHWIVQYDAPTDPAFFVHRVGRTARAGRSGRSLTLLQPEEDAYVEFLALRKVPMHAMDD----AQACAEIWDPYPEVKRMVRADRDLLEKGTRAFISFLRDYKEHHCQFIFRFAHLDLGAIARAFALLRLPKMPELR 723
            Q TP+TL NWY     + KL  L++F+Q +   K IVFL+TCASVDFF KV+  L P     + V++LHG++A KKRV  YE F    +G+L CTDV ARG+D+PDV WIVQ+D P DP FFVHRVGRTARAGRSG +LT L   EDAYV FL +RKVP+  MDD         EI D   +VK     DRD+LEKGT+AFISFLR YKEH CQFIFRF  LDL  +A  F L +LPK+ ELR
Sbjct:   32 QKTPTTLTNWYAQVEYDSKLAALIQFIQARPTEKCIVFLSTCASVDFFGKVIEMLLPE----VNVVSLHGKMAPKKRVNYYEAFANHKSGLLVCTDVVARGIDLPDVDWIVQFDPPQDPNFFVHRVGRTARAGRSGSALTFLSANEDAYVNFLRIRKVPLAPMDDLVVDGTKRVEILD---KVKSFQMEDRDVLEKGTKAFISFLRSYKEHQCQFIFRFRDLDLAKVAEGFCLFQLPKINELR 267          
BLAST of mRNA_P-wetherbeei_contig10406.1.1 vs. uniprot
Match: A0A0P1AZG5_PLAHL (Dead deah box rna n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AZG5_PLAHL)

HSP 1 Score: 268 bits (685), Expect = 1.790e-82
Identity = 138/240 (57.50%), Postives = 170/240 (70.83%), Query Frame = 1
Query:    7 QATPSTLDNWYLFCRPEEKLGLLVRFLQRQKACKVIVFLATCASVDFFSKVLGQLSPMRRHGIPVLALHGQLAQKKRVAAYERFLALPAGVLGCTDVAARGVDIPDVHWIVQYDAPTDPAFFVHRVGRTARAGRSGRSLTLLQPEEDAYVEFLALRKVPMHAMDDAQACAEIWDPYPEVKRMVRADRDLLEKGTRAFISFLRDYKEHHCQFIFRFAHLDLGAIARAFALLRLPKMPELRD 726
            Q TP+TL N+Y     +++L  L RF+  +K  K+I+F +TC SVDFFS VL +L   +    PV+ALHG++ QKKR   Y +FLAL +G+L CTDV ARG+D+PDV WIVQYD P DP FFVHRVGRTARAGR G +L  L   EDAYV FL +RKVP   M  +    E  D  P+VK +V  DRD LEKGT+AFI+F+R YKEH CQFIFRF  LDLGA+AR F LL+LPK+ ELR+
Sbjct:  229 QVTPATLQNYYCLVGHDQRLSALHRFVLLKKGEKLIIFFSTCKSVDFFSLVLEELFRDKEE-YPVVALHGKMPQKKRTTNYNQFLALKSGLLVCTDVVARGIDLPDVDWIVQYDPPQDPNFFVHRVGRTARAGRHGCALLFLSSNEDAYVNFLKIRKVPCKEMTLSLETME--DVLPKVKSLVLEDRDFLEKGTKAFIAFVRSYKEHQCQFIFRFKELDLGAVARGFCLLQLPKINELRN 465          
BLAST of mRNA_P-wetherbeei_contig10406.1.1 vs. uniprot
Match: M4C4T4_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C4T4_HYAAE)

HSP 1 Score: 268 bits (685), Expect = 2.080e-82
Identity = 137/240 (57.08%), Postives = 169/240 (70.42%), Query Frame = 1
Query:    7 QATPSTLDNWYLFCRPEEKLGLLVRFLQRQKACKVIVFLATCASVDFFSKVLGQLSPMRRHGIPVLALHGQLAQKKRVAAYERFLALPAGVLGCTDVAARGVDIPDVHWIVQYDAPTDPAFFVHRVGRTARAGRSGRSLTLLQPEEDAYVEFLALRKVPMHAMDDAQACAEIWDPYPEVKRMVRADRDLLEKGTRAFISFLRDYKEHHCQFIFRFAHLDLGAIARAFALLRLPKMPELRD 726
            Q TP+TL N++     +++L  L  F+Q +K  K+IVF +TC SVDFF +VL +L       +PV++LHG++ QKKR   Y+ F  L AG+L CTDV ARG+D+PDV WIVQYD P DP FFVHRVGRTARAGRSG +L+ L   EDAYV FL +RKVP   M       E  D  P+VK M+  DRD LEKGT+AFISF+R YKEH CQFIFRF  LDLGA+AR F LL+LPK+ ELR+
Sbjct:  234 QVTPATLKNYFCLVGHDQRLSALHHFVQTKKDEKLIVFFSTCGSVDFFGRVLEELFSGHTK-VPVVSLHGKMPQKKRTTNYDHFSTLKAGLLVCTDVVARGIDLPDVDWIVQYDPPQDPNFFVHRVGRTARAGRSGCALSFLSSNEDAYVNFLKIRKVPCEEMTLPVDTME--DVLPKVKSMILKDRDFLEKGTKAFISFVRSYKEHQCQFIFRFKELDLGAVARGFCLLQLPKINELRN 470          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10406.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
K3WQ09_GLOUD8.720e-8857.08Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A8K1CU56_PYTOL1.560e-8458.75Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A835YKT0_9STRA2.610e-8457.66P-loop containing nucleoside triphosphate hydrolas... [more]
H3G5E4_PHYRM5.710e-8457.08Uncharacterized protein n=4 Tax=Peronosporaceae Ta... [more]
A0A5D6Y4E8_9STRA3.140e-8356.43Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A2D4C6T9_PYTIN3.490e-8356.25DEAD/DEAH box RNA helicase, putative n=1 Tax=Pythi... [more]
D0MY83_PHYIT3.700e-8357.50DEAD/DEAH box RNA helicase, putative n=26 Tax=Phyt... [more]
A0A1V9Y6I3_9STRA1.550e-8257.20DEAD/DEAH box RNA helicase (Fragment) n=1 Tax=Thra... [more]
A0A0P1AZG5_PLAHL1.790e-8257.50Dead deah box rna n=1 Tax=Plasmopara halstedii Tax... [more]
M4C4T4_HYAAE2.080e-8257.08Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10406contigP-wetherbeei_contig10406:467..2340 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog65071.PYU1_T007051
PFAMsDEAD,DUF4217,Helicase_C
Model size732
Max annot lvl121069|Pythiales
Hectar predicted targeting categoryother localisation
Exons5
Evalue1.43e-88
EggNOG OGsCOG0513@1|root,KOG0345@2759|Eukaryota,1MCUU@121069|Pythiales
Ec32 ortholog descriptionDEAD box helicase
Ec32 orthologEc-22_000740.1
DescriptionDEAD DEAH box RNA helicase. Source PGD
Cds size732
COG categoryA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185868.1248167-CDS-P-wetherbeei_contig10406:466..6311683185868.1248167-CDS-P-wetherbeei_contig10406:466..631Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10406 467..631 -
1683185868.1329284-CDS-P-wetherbeei_contig10406:886..9431683185868.1329284-CDS-P-wetherbeei_contig10406:886..943Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10406 887..943 -
1683185868.140169-CDS-P-wetherbeei_contig10406:1327..14391683185868.140169-CDS-P-wetherbeei_contig10406:1327..1439Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10406 1328..1439 -
1683185868.147175-CDS-P-wetherbeei_contig10406:1742..19841683185868.147175-CDS-P-wetherbeei_contig10406:1742..1984Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10406 1743..1984 -
1683185868.1544795-CDS-P-wetherbeei_contig10406:2184..23401683185868.1544795-CDS-P-wetherbeei_contig10406:2184..2340Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10406 2185..2340 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10406.1.1prot_P-wetherbeei_contig10406.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig10406 467..2340 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig10406.1.1

>prot_P-wetherbeei_contig10406.1.1 ID=prot_P-wetherbeei_contig10406.1.1|Name=mRNA_P-wetherbeei_contig10406.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=244bp
RIQATPSTLDNWYLFCRPEEKLGLLVRFLQRQKACKVIVFLATCASVDFF
SKVLGQLSPMRRHGIPVLALHGQLAQKKRVAAYERFLALPAGVLGCTDVA
ARGVDIPDVHWIVQYDAPTDPAFFVHRVGRTARAGRSGRSLTLLQPEEDA
YVEFLALRKVPMHAMDDAQACAEIWDPYPEVKRMVRADRDLLEKGTRAFI
SFLRDYKEHHCQFIFRFAHLDLGAIARAFALLRLPKMPELRDAA
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mRNA from alignment at P-wetherbeei_contig10406:467..2340-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig10406.1.1 ID=mRNA_P-wetherbeei_contig10406.1.1|Name=mRNA_P-wetherbeei_contig10406.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1874bp|location=Sequence derived from alignment at P-wetherbeei_contig10406:467..2340- (Phaeothamnion wetherbeei SAG_119_79)
CGAATCCAGGCGACGCCGTCGACGCTGGACAACTGGTACCTCTTCTGCCG GCCCGAGGAGAAGCTCGGGCTGCTCGTGCGCTTCCTGCAGCGGCAGAAGG CCTGCAAAGTAATCGTTTTCCTCGCCACATGCGCCAGTGTAGACTTCTTC TCCAAGGTGAGGCGCGCCGGCTCGGCCCATTTTGCTTTCATTTCGAACTT TTTCTCCTCAGTTTCAAGGAAGAGGTGCCGGTTCTTCCTTCGCTCCTACT CCAGTTTCGGCATGCAATTCTTTCATCAAGACCGGCTTGTTACCAAACTT AATGAAGCCCACCTCTCATTTATCTCTCCCTCGTTTCCTATTGCGGTGCC TGACAGGTGCTCGGCCAGCTGTCGCCGATGCGGCGCCACGGCATCCCCGT GCTGGCGCTCCACGGGCAGCTGGCACAGAAGAAGCGCGTCGCGGCCTACG AGCGCTTCCTGGCGCTGCCGGCAGGCGTCCTGGGCTGCACTGACGTGGCG GCACGCGGCGTGGACATCCCGGACGTGCACTGGATCGTGCAGTACGACGC GCCAACCGACCCAGCCTTTTTCGTCCATCGCGTCGGCCGCACCGCCAGGT AAGAAAGGCAGGGGAAACAGAAGGGAAGGGAAGGGAAGGATGTGAGTGCT TGGTCGTGTTGGGCCTGCCTTTGAGAGTTATACGTGTTCTGCCGGCTTTT TCCGTGTCGCGGCAGGCGGCATTTTTTCCCCCGCCCGCACGCGAAGTGTT CTGACTGAGGCCTGTAGAGCTTACGTCCACCTGCCTGCTATTGAGTAGTT TTTTAACTTCTCCCGTCTCATTCTGCTTCTCAATTTCCTTCTTTGCGAAC CTTCTCCTTCGCTCGCTCCGTTTTGCTCGCCCGCCTGGCTGGCTGGCGCA GGGCGGGTCGGAGCGGCCGCTCGTTAACCCTGCTGCAGCCGGAAGAGGAC GCCTACGTTGAATTTCTTGCGCTGCGCAAGGTGCCCATGCACGCAATGGA CGACGCCCAGGCGGTGGCGCTCTTTGGGACCACCGCCGTGTTGGCCACGG CGAAGGCGGCGGAAGTGGCGGAGGCAGACGGGTCCGGCGACGGCGGTGGT GGGGGCGGGGACGAGGAGGAAGGGGAGGGGTCGGCGGCGGCGCGCGCGGC GTCGACCGCGGCAGATCTGGACGCCGCAGGCGCCGCGGCCGATGCGGAAG ACGATGGTGTCGCAGTGGAAGCCATGGATGGTAGCAATGCAGAAGAGGGC TCCGGAGAGGACGAGGGGGAGGAGGGCGCTTCCGACGATTTAGACGACGA AATGGAGGGCGACGACGGCGCTGCCGATGTCGGCGGCGAAGGCGCAAAGG CGGCAGCGGTGTTTGCGGCGCACGACGAGGACGACTGCAACCTGGAGTGC GCGGAGATTTGGGATCCGTATCCGGAGGTCAAGCGAATGGTCCGGGCCGA CCGGGTGAGTCCTGTTTCGGCGGGTGGTTTGGCCGGTGGGTTATGCTGGC TTGCGGATGGATGGTTTTACCGCCTCTGTTCTTAAGAGATCCGTCCTTTC CCCGCCTTTTCTATCCACATGCTACACGGATTGGAAAAAGATGGCGCTGT AACGCTCTCACACACTGCCTCCTATCACCCCCGGTCCGGCCCGCCCCGTT CCGGTTCTGGCCCGGGTCTCTCACCGGCGGACGAAAAACGGGAAAATGAC GGCCGGCAGGACCTGCTGGAGAAGGGCACGCGCGCCTTCATTTCGTTCCT GCGCGACTACAAGGAGCACCATTGCCAGTTCATCTTCCGCTTCGCGCACC TCGATCTGGGCGCCATCGCCCGCGCCTTCGCGCTGCTGCGACTGCCCAAG ATGCCTGAGCTGCGCGATGCCGCC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig10406:467..2340-

>mRNA_P-wetherbeei_contig10406.1.1 ID=mRNA_P-wetherbeei_contig10406.1.1|Name=mRNA_P-wetherbeei_contig10406.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=732bp|location=Sequence derived from alignment at P-wetherbeei_contig10406:467..2340- (Phaeothamnion wetherbeei SAG_119_79)
CGAATCCAGGCGACGCCGTCGACGCTGGACAACTGGTACCTCTTCTGCCG
GCCCGAGGAGAAGCTCGGGCTGCTCGTGCGCTTCCTGCAGCGGCAGAAGG
CCTGCAAAGTAATCGTTTTCCTCGCCACATGCGCCAGTGTAGACTTCTTC
TCCAAGGTGCTCGGCCAGCTGTCGCCGATGCGGCGCCACGGCATCCCCGT
GCTGGCGCTCCACGGGCAGCTGGCACAGAAGAAGCGCGTCGCGGCCTACG
AGCGCTTCCTGGCGCTGCCGGCAGGCGTCCTGGGCTGCACTGACGTGGCG
GCACGCGGCGTGGACATCCCGGACGTGCACTGGATCGTGCAGTACGACGC
GCCAACCGACCCAGCCTTTTTCGTCCATCGCGTCGGCCGCACCGCCAGGG
CGGGTCGGAGCGGCCGCTCGTTAACCCTGCTGCAGCCGGAAGAGGACGCC
TACGTTGAATTTCTTGCGCTGCGCAAGGTGCCCATGCACGCAATGGACGA
CGCCCAGGCGTGCGCGGAGATTTGGGATCCGTATCCGGAGGTCAAGCGAA
TGGTCCGGGCCGACCGGGACCTGCTGGAGAAGGGCACGCGCGCCTTCATT
TCGTTCCTGCGCGACTACAAGGAGCACCATTGCCAGTTCATCTTCCGCTT
CGCGCACCTCGATCTGGGCGCCATCGCCCGCGCCTTCGCGCTGCTGCGAC
TGCCCAAGATGCCTGAGCTGCGCGATGCCGCC
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