mRNA_P-wetherbeei_contig10402.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig10402.1.1
Unique NamemRNA_P-wetherbeei_contig10402.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig10402.1.1 vs. uniprot
Match: D8LP47_ECTSI (EsV-1-170 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP47_ECTSI)

HSP 1 Score: 263 bits (673), Expect = 4.900e-83
Identity = 148/304 (48.68%), Postives = 201/304 (66.12%), Query Frame = 1
Query:    1 MSHDIVHKVNKAFKEIDSRWIQRDRKLNTLNIFSAMHQSFVRKRGISHVLE-EMCDVSATALSKARVKIPDGVFADVNRQLVR-TCGPRVLAVDGSKVHVNPAFAKEGFKTRTNACPMLKRPALHPLAMLNAVVDVHTKCCVAHSLTSHFNERKGISDLLAELTKGDILVFDRGYYSAELLRAILHAKMHAVFRLRVNAFQGCRRFFESNRVEMKVPIVGAGLMRLVKYRIDGRWYACLTTLPQDEFDRGKIQKLYGDRWRVEEFFKRLKSSLFLETSHSRTTRGFRQEVEMRILVDTITLQSQ 906
            M+  +  ++  AFK+ D +W+QR RKL+T ++F  + +  +++RG++H+L  E    S+ A+  AR K+P G F +VNR L R    PRV AVDGSKVHV+P+F   G+ TRTN  P+  RPA  PL ML+++VDV TK CV   LT HFNERK  +++L  + KGD LVFDRGYYS  LLR++  +    V+RL+++AF+G R FF S R E    I+G    RL+KY IDG+ Y CLT  P     R  I+ +Y  RWRVEE FKRLKS+L LE +H+RT   + QEVE R+L+DTITL+ Q
Sbjct:    1 MTKPMSPEIYDAFKKCDGQWMQRRRKLDTSSLFYTLTKCCIQERGVAHILRMENEQYSSQAIHSARKKLPPGAFKEVNRFLQRGPHEPRVFAVDGSKVHVHPSFIGAGYMTRTNNKPV-PRPAKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLRGVRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLKIDAFKGTRSFFNSCRTEAACLILGIEA-RLLKYFIDGKTYVCLTNDPS--LSRRDIKTMYASRWRVEESFKRLKSNLRLEKAHARTPDLYIQEVEARVLLDTITLRMQ 300          
BLAST of mRNA_P-wetherbeei_contig10402.1.1 vs. uniprot
Match: Q8QNB6_ESV1K (EsV-1-170 n=2 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNB6_ESV1K)

HSP 1 Score: 263 bits (671), Expect = 1.840e-82
Identity = 146/293 (49.83%), Postives = 198/293 (67.58%), Query Frame = 1
Query:   34 AFKEIDSRWIQRDRKLNTLNIFSAMHQSFVRKRGISHVLEEMCDV-SATALSKARVKIPDGVFADVNRQLVR-TCGPRVLAVDGSKVHVNPAFAKEGFKTRTNACPMLKRPALHPLAMLNAVVDVHTKCCVAHSLTSHFNERKGISDLLAELTKGDILVFDRGYYSAELLRAILHAKMHAVFRLRVNAFQGCRRFFESNRVEMKVPIVGAGLMRLVKYRIDGRWYACLTTLPQDEFDRGKIQKLYGDRWRVEEFFKRLKSSLFLETSHSRTTRGFRQEVEMRILVDTITLQSQ 906
            AFK+ D +W+QR RK++T ++F  + +  V+ RG++HVL+   +  S+ A+  AR K+P G F +VNR L R    PRV AVDGSKVHV+P+F   G+KTRTN  P+  RPA  PL ML+++VDV TK C+   LT HFNER+  + +L  + KGD L+FDRGYYS +LL ++  +    V+RL+++AF+G R FF S R E    I+G    RL+KY IDG+ Y CLTT P     R KI+ +Y  RWRVEE FKRLKS+L LE +H+RT   + QEVE R+L+DTITL+ Q
Sbjct:   12 AFKKCDQQWMQRRRKMDTSSLFYTLTRCCVQGRGVNHVLKMEDEAYSSQAVHSARKKLPMGAFKEVNRFLHRGPHEPRVFAVDGSKVHVHPSFINAGYKTRTNDQPV-SRPAKRPLVMLSSMVDVKTKACIDFELTKHFNERRAATSMLRSVQKGDTLLFDRGYYSKDLLHSVHGSHAFGVWRLKIDAFRGTRSFFNSCRTEATCLILGVKA-RLLKYFIDGKTYVCLTTDPS--LSRLKIKTMYASRWRVEESFKRLKSNLRLEKAHARTPDLYIQEVEARVLLDTITLRMQ 300          
BLAST of mRNA_P-wetherbeei_contig10402.1.1 vs. uniprot
Match: D8LP60_ECTSI (EsV-1-155 (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP60_ECTSI)

HSP 1 Score: 254 bits (648), Expect = 3.310e-79
Identity = 144/307 (46.91%), Postives = 198/307 (64.50%), Query Frame = 1
Query:    1 MSHDIVHKVNKAFKEIDSRWIQRDRKLNTLNIFSAMHQSFVRKRGISHVLE-EMCDVSATALSKARVKIPDGVFADVNRQLVR-TCGPRVLAVDGSKVHVNPAFAKEGFKTRTNACPMLKRPALHPLAMLNAVVDVHTKCCVAHSLTSHFNERKGISDLLAELTKGDILVFDRGYYSAELLRAILHAKMHAVFRLRVNAFQGCRRFFESNRVEMKVPIVGAGLMRLVKYRIDGRWYACLTTLPQDEFDRGKIQKLYGDRWRVEEFFKRLKSSLFLETSHSRTTRGFRQEVEMRILVDTITLQSQTKL 915
            M+  +  ++  AFK+ D +W+QR RKL+T ++F  + +  +++RG++H+L  E    S+ A+  AR K+P G F +VNR L R    PRV AVDGSKVHV+P+F   G+ TRTN  P+  RPA  PL ML+++VDV TK CV   LT HFNERK  +++L  + KGD LVFDRGYYS  LLR++  +    V+RL++NAF+G R FF S   E    I+G    RL+KY I G+ Y CLT        R  I+ +Y  RWRVEE  KRLKS+L LE +H++T   + QEVE R+L+DTITL+ Q  +
Sbjct:    1 MTKPMSPEIYDAFKKCDGQWMQRRRKLDTSSLFYTLTKCCIQERGVAHILRMENEQYSSQAIHSARKKLPPGAFKEVNRFLQRGPHEPRVFAVDGSKVHVHPSFIGAGYVTRTNNKPV-PRPAKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLRCVRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLKINAFKGTRPFFNSCHTEATCLILGVRA-RLLKYFISGKTYVCLTN--DLSLSRRDIKVMYASRWRVEESLKRLKSNLKLEKAHAKTPALYIQEVEARVLLDTITLRLQKSI 303          
BLAST of mRNA_P-wetherbeei_contig10402.1.1 vs. uniprot
Match: A0A6H5K772_9PHAE (DDE_Tnp_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K772_9PHAE)

HSP 1 Score: 260 bits (665), Expect = 9.960e-78
Identity = 144/297 (48.48%), Postives = 199/297 (67.00%), Query Frame = 1
Query:   25 VNKAFKEIDSRWIQRDRKLNTLNIFSAMHQSFVRKRGISHVLEEMCDV-SATALSKARVKIPDGVFADVNRQLVR-TCGPRVLAVDGSKVHVNPAFAKEGFKTRTNACPMLKRPALHPLAMLNAVVDVHTKCCVAHSLTSHFNERKGISDLLAELTKGDILVFDRGYYSAELLRAILHAKMHAVFRLRVNAFQGCRRFFESNRVEMKVPIVGAGLMRLVKYRIDGRWYACLTTLPQDEFDRGKIQKLYGDRWRVEEFFKRLKSSLFLETSHSRTTRGFRQEVEMRILVDTITLQSQT 909
            V  ++++ D +WIQR RK++T ++F  + +  V+ RG+SHVL+   +  S+ A+  AR K+P G F +VNR L R    PRV AVDGSKVHV+P+F   G+KTRTN  P+  RPA  PL ML+++VDV TK C+   LT HFNER+  + +L  + KGD L+FDRGYYS +LLR++  +    V+RL+++AF+G R FF S R E    I+G    RL+KY IDG+ Y CLT  P     R  I+ +Y  RWRVEE FKRLKS+L LE +H++T   + QEVE R+L+DTITL+ Q+
Sbjct:   24 VEMSYQKCDQQWIQRRRKMDTSSLFFTLTRCCVQGRGVSHVLKMEDEAYSSQAVHSARKKLPIGAFKEVNRFLHRGPHEPRVFAVDGSKVHVHPSFINSGYKTRTNDQPV-SRPAKRPLVMLSSMVDVKTKACIDFELTKHFNERRAATSMLRSVRKGDTLLFDRGYYSKDLLRSVHDSHAFGVWRLKIDAFKGTRSFFNSCRTEAACLILGIEA-RLLKYFIDGKTYVCLTNDPS--LSRRDIKTMYASRWRVEESFKRLKSNLKLEKAHAKTPALYIQEVEARVLLDTITLRMQS 316          
BLAST of mRNA_P-wetherbeei_contig10402.1.1 vs. uniprot
Match: A0A6H5JA56_9PHAE (DDE_Tnp_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA56_9PHAE)

HSP 1 Score: 236 bits (601), Expect = 4.010e-68
Identity = 138/305 (45.25%), Postives = 194/305 (63.61%), Query Frame = 1
Query:    1 MSHDIVHKVNKAFKEIDSRWIQRDRKLNTLNIFSAMHQSFVRKRGISHVLE-EMCDVSATALSKARVKIPDGVFADVNRQLVR-TCGPRVLAVDGSKVHVNPAFAKEGFKTRTNACPMLKRPALHPLAMLNAVVDVHTKCCVAHSLTSHFNERKGISDLLAELTKGDILVFDRGYYSAELLRAILHAKMHAVFRLRVNAFQGCRRFFESNRVEMKVPIVGAGLMRLVKYRIDGRWYACLTTLPQDEFDRGKIQKLYGDRWRVEEFFKRLKSSLFLETSHSRTTRGFRQEVEMRILVDTITLQSQT 909
            M+  I  ++  AFK+ D++W+QR RKL+T ++F  + +   R+RG+SHVL+ E  + S+ A+  AR K+P G F +VNR L R    PR+ A+DGSKVHV+P+F K G+KTRTN  P+  RPA  PL ML+++VDV TK C+   LT HF+ER+    +L  + K D L+FDRGYYS +LLR++  +    V+RLR+                M   I+G  + RL+KY I G+ Y CLT  P     R  I+ +Y  RWRVEE FKRLKS+L LE +H++T   + QEVE R+L+DTITL+ Q+
Sbjct:    1 MTRPISPEIYDAFKKCDAQWMQRRRKLDTSSVFYTITKCCTRERGVSHVLKMEAEEYSSQAVHLARKKLPIGAFKEVNRFLHRGPHEPRIFAIDGSKVHVHPSFIKAGYKTRTNDKPV-PRPAKRPLVMLSSMVDVRTKSCIDFELTKHFDERRAAVSMLRSVRKSDTLLFDRGYYSKDLLRSVHDSGAFGVWRLRI----------------MPCLILGVRV-RLLKYFIKGKTYVCLTNDPS--LSRRDIKTMYAWRWRVEESFKRLKSNLKLEKAHAKTPALYIQEVEARVLLDTITLRMQS 285          
BLAST of mRNA_P-wetherbeei_contig10402.1.1 vs. uniprot
Match: A0A6H5K0K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0K9_9PHAE)

HSP 1 Score: 170 bits (431), Expect = 2.200e-48
Identity = 110/247 (44.53%), Postives = 145/247 (58.70%), Query Frame = 1
Query:  169 SATALSKARVKIPDGVFADVNRQLVR-TCGPRVLAVDGSKVHVNPAFAKEGFKTRTNACPMLKRPALHPLAMLNAVVDVHTKCCVAHSLTSHFNERKGISDLLAELTKGDILVFDRGYYSAELLRAILHAKMHAVFRLRVNAFQGCRRFFESNRVEMKVPIVGAGLMRLVKYRIDGRWYACLTTLPQDEFDRGKIQKLYGDRWRVEEFFKRLKSSLFLETSHSRTTRGFRQEVEMRILVDTITLQSQ 906
            S+ A+  AR K+P G F +VNR L +    PRV AVDGSKVHV+P+F   G+KTRTN  P+  RPA  PL ML+++VDV TK CV   LT HFNE                   D      + LR+I  ++   V+RL++NAF+G + F  S R E    I+G    RLVKY I+G+ Y CLT  P     R  I+ +Y  RWR E+   RLKS++ LE +H+RT   + QEVE R+L+DTITL+ Q
Sbjct:    7 SSQAIHLARKKLPVGAFKEVNRFLHQGPHEPRVFAVDGSKVHVHPSFIGAGYKTRTNDKPV-PRPAKSPLVMLSSMVDVKTKACVDFELTKHFNE-------------------DGSRIYTQKLRSIHDSQAFGVWRLKINAFKGTKSFISSWRTETTCLILGVQ-SRLVKYSINGKTYVCLTNDPT--LSRRDIKAIYASRWRGEQSL-RLKSNVRLEKAHARTPDLYIQEVEARVLLDTITLRLQ 229          
BLAST of mRNA_P-wetherbeei_contig10402.1.1 vs. uniprot
Match: A0A6L8GJ11_9BACT (IS4 family transposase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A6L8GJ11_9BACT)

HSP 1 Score: 119 bits (298), Expect = 2.450e-26
Identity = 93/314 (29.62%), Postives = 150/314 (47.77%), Query Frame = 1
Query:   49 DSRWIQRDRKLNTLNIFSAMHQSFV--RKRGISHVLEEMCD--------------VSATALSKARVKIPDGVFADVNRQLVRTCGP-------RVLAVDGSKVHVNPAFAKEGFKTRTNACPMLKRPALHPLAMLNAVVDVHTKCCVAHSLTSHFNERKGISDLLAELTKGDILVFDRGYYSAELLRAILHAKMHAVFRLRVNAFQGCRRFFESNRVEMKV-----PIVGAGL-------------MRLVKYRIDGRWYACLTTL-PQDEFDRGKIQKLYGDRWRVEEFFKRLKSSLFLETSHSRTTRGFRQEV 864
            D RW++R R LN+L +   + +  +  R++G + V  E+ +              V A+++ KAR ++ + +F D++R+++R  G        RV AVDG+K+++       G+       P+ K  A +P  +++ +  + TK  V  SL++   ER      L  L  GD++VFDRGY+S ELL A++    H VFRL+ N     R F   +  E  V     P     L             +RLV+ R  G  +   TTL   D+     +  LY  RW +EE +K  K ++ ++  H RT RG RQE+
Sbjct:  342 DRRWMKRRRVLNSLIVMLFVFRLVLSRREKGYATVTAELWEQCRKLGIALPQREPVVASSICKARQRVHEELFLDLHREILRHGGDGARWKGRRVFAVDGTKMNLPRGLVDAGY-------PLPKDGAHYPQGLVSCLYRLDTKVPVDFSLSARACERTAALGHLHALEAGDVVVFDRGYFSFELLHAVIRTGAHPVFRLQANGVAAFRDFMAGDGTEAVVAASPGPDTRRELARRRPGERFDPVDVRLVRCRTGGDGFNLATTLLDADDVSADDLGALYQGRWSIEELYKVSKQTVAVDEFHGRTERGVRQEL 648          
BLAST of mRNA_P-wetherbeei_contig10402.1.1 vs. uniprot
Match: UPI00114D1903 (IS4 family transposase n=1 Tax=Oligoflexus tunisiensis TaxID=708132 RepID=UPI00114D1903)

HSP 1 Score: 113 bits (283), Expect = 3.510e-25
Identity = 91/335 (27.16%), Postives = 154/335 (45.97%), Query Frame = 1
Query:   25 VNKAFKEIDSRWIQRDRKLNT-LNIFSAMHQSFVRKRGISHV-------------LEEMCDVSATALSKARVKIPDGVFADVNRQLVRT-----------CGPRVLAVDGSKVHVNPAFAKEGFKTRTNACPMLKRPALHPLAMLNAVVDVHTKCCVAHSLTSHFNERKGISDLLAELTKGDILVFDRGYYSAELLRAILHAKMHAVFRLRVNAFQG-CRRFFESNRVEMKVPI----------VGAGL---------MRLVKYRIDGRWYACLTTL-PQDEFDRGKIQKLYGDRWRVEEFFKRLKSSLFLETSHSRTTRGFRQEVEMRILVDTI 891
            V K     D  WI R RK+++ L I   +  SF R+   S +             L     +SA++ S+AR K+   VF D++ +++              G R+ A+D SK+++     + G+     +C        +P  +L+ + D+ +K      L    +ER  +   L  L  GD++V+DRGY+S +L +  +   +HAVFR++     G  ++  E   ++ ++ I          V A L         +RLVKYRI G  Y  +TTL  +D +   ++  LY  RW +E+ FK LK    +ET H R     +QE+  ++L+ T+
Sbjct:   17 VRKIASRYDKEWIVRKRKVDSFLLILILLRISFSRQGYSSSISSLWPAVQFAIPRLRSSKPISASSFSEARSKLNPKVFRDIHCEIIEAYMQGRGESNKWLGHRIFAIDASKINLPVELKENGYMPSNKSCH-------YPQGLLSCLFDLASKIPYDFQLEPLMSERICVPLHLDYLKAGDVVVYDRGYFSYDLAKEHIARGIHAVFRIKSKGNMGRLQKLIERRTMDNEIDIKPDSSRYTRRVKARLRLRQLDRIRLRLVKYRIKGNLYYLVTTLLDKDAYSPDRLMDLYAKRWDIEDLFKTLKRVTEIETFHGRCESSVKQEIFAQMLLITL 344          
BLAST of mRNA_P-wetherbeei_contig10402.1.1 vs. uniprot
Match: A0A658K6S8_PSEA0 (IS4 family transposase n=3 Tax=Pseudomonas amygdali TaxID=47877 RepID=A0A658K6S8_PSEA0)

HSP 1 Score: 112 bits (281), Expect = 9.680e-25
Identity = 78/263 (29.66%), Postives = 132/263 (50.19%), Query Frame = 1
Query:  166 VSATALSKARVKIPDGVFADVNRQLVRTC----------GPRVLAVDGSKVHVNPAFAKEGFKTRTNACPMLKRPALHPLAMLNAVVDVHTKCCVAHSLTSHFNERKGISDLLAELTKGDILVFDRGYYSAELLRAILHAKMHAVFRLRVNAFQG-CRRFFESNRVEMKV-----PIVGAGL-------------MRLVKYRIDGRWYACLTTLP-QDEFDRGKIQKLYGDRWRVEEFFKRLKSSLFLETSHSRTTRGFRQEV 864
            V+ ++L +AR K+P+ VF  +N +L+             G RV A+DGSK++      + G+KT             +P AM++ + ++  +      L  H +ER+ + + LA+L +GD+++FDRGY+S ++L  +L +  HAVFRL+          F++++R +  +     P V  GL             +RLVK +I+   +   TTL  Q  +       LY  RW +EE +K  K  + +E  HS+T RG +QE+
Sbjct:   47 VAPSSLCEARQKLPEAVFKTLNDELISLWHAHRDTPTWKGHRVFAIDGSKINAPRGLLEYGYKTPRETTRH------YPCAMMSGLYNLQEQLIYDFELVPHNDERRCVPEHLAKLERGDLVIFDRGYFSYQILHEVLASGQHAVFRLQQGTTNSQVAAFWDNDRKDAIIDYVPSPAVKHGLKKRGHTTGFQPLAIRLVKCKIEDETHVYATTLMNQTGYSVDCFADLYHGRWGIEELYKVSKQFIDVEDFHSQTERGVKQEI 303          
BLAST of mRNA_P-wetherbeei_contig10402.1.1 vs. uniprot
Match: A0A6I7WWQ4_9GAMM (DDE_Tnp_1 domain-containing protein n=10 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A6I7WWQ4_9GAMM)

HSP 1 Score: 112 bits (280), Expect = 1.680e-24
Identity = 85/354 (24.01%), Postives = 166/354 (46.89%), Query Frame = 1
Query:   13 IVHKVNKAFKEIDSRWIQRDRKLNTLNIFSAMHQSFVRK--RGISHVLEEMCD--------------VSATALSKARVKIPDGVFADVNRQLV--------------RTCGPRVLAVDGSKVHVNPAFAKEGFKTRTNACPMLKRPALHPLAMLNAVVDVHTKCCVAHSLTSHFNERKGISDLLAELTKGDILVFDRGYYSAELLRAILHAKMHAVFRLRVNAFQGCRRFFESNRVEMKVPIVG------------------AGLMRLVKYRIDGRWYACLTTLPQDEFDRGKIQKLYGDRWRVEEFFKRLKSSLFLETSHSRTTRGFRQEVEMRILVDTI----TLQSQTKLN 918
            +V  ++   +E D++W +R R +++L +   + +    K  +G    +EE                 +SA++ S AR K+ + +F  +N++++              R    R+ AVDGSK+++        ++T +       + A +P  +L+ +  + +K      L +H NER+     L  LT GD++V+DRGY+S  +L   +   +H VFRL+ N F+    F  S + +  + ++                   A  +RL+KY ++G+ Y   TTL  + +    ++++Y  RW +EE +K  K+ + ++  H R+ R  +QE+    ++ T+    T +S+  LN
Sbjct:    7 VVMIISDVAQEFDAKWQKRKRVIDSLLLVFLIFRLVFSKNSQGYGTTIEEFWHNCLRMKFPLPQKKPISASSFSDARKKLDENIFKVLNQRIIAAHDTLAEPDNQSQRWLNHRLFAVDGSKLNLPRELIDHHYRTPS-------KDAYYPQGLLSCLYQLKSKIPYDFDLVNHGNERQCALAHLKTLTTGDVVVYDRGYFSYAMLYYHMQMGVHPVFRLQKNTFKAIDDFRNSTQTDQIITLLPTKETQRDIRKQYPDIQFKALTIRLIKYTLEGKTYCIGTTLLDERYTIDALKEVYHARWGIEELYKISKNMIVVDDFHGRSERTVKQELFAHFVLITMSRLCTNESENLLN 353          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10402.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LP47_ECTSI4.900e-8348.68EsV-1-170 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
Q8QNB6_ESV1K1.840e-8249.83EsV-1-170 n=2 Tax=Ectocarpus siliculosus virus 1 (... [more]
D8LP60_ECTSI3.310e-7946.91EsV-1-155 (Partial) (Fragment) n=1 Tax=Ectocarpus ... [more]
A0A6H5K772_9PHAE9.960e-7848.48DDE_Tnp_1 domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JA56_9PHAE4.010e-6845.25DDE_Tnp_1 domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K0K9_9PHAE2.200e-4844.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6L8GJ11_9BACT2.450e-2629.62IS4 family transposase n=1 Tax=Acidobacteria bacte... [more]
UPI00114D19033.510e-2527.16IS4 family transposase n=1 Tax=Oligoflexus tunisie... [more]
A0A658K6S8_PSEA09.680e-2529.66IS4 family transposase n=3 Tax=Pseudomonas amygdal... [more]
A0A6I7WWQ4_9GAMM1.680e-2424.01DDE_Tnp_1 domain-containing protein n=10 Tax=Gamma... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10402contigP-wetherbeei_contig10402:1376..2293 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1046724.KB889834_gene1048
PFAMsDDE_Tnp_1,Nterm_IS4
Model size918
Max annot lvl1236|Gammaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.87e-23
EggNOG OGsCOG3385@1|root,COG3385@2|Bacteria,1MVRM@1224|Proteobacteria,1RRFT@1236|Gammaproteobacteria,464GA@72275|Alteromonadaceae
DescriptionCOG3385 FOG Transposase and inactivated derivatives
Cds size918
COG categoryL
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185867.9897006-CDS-P-wetherbeei_contig10402:1375..22931683185867.9897006-CDS-P-wetherbeei_contig10402:1375..2293Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10402 1376..2293 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10402.1.1prot_P-wetherbeei_contig10402.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig10402 1376..2293 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig10402.1.1

>prot_P-wetherbeei_contig10402.1.1 ID=prot_P-wetherbeei_contig10402.1.1|Name=mRNA_P-wetherbeei_contig10402.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=306bp
MSHDIVHKVNKAFKEIDSRWIQRDRKLNTLNIFSAMHQSFVRKRGISHVL
EEMCDVSATALSKARVKIPDGVFADVNRQLVRTCGPRVLAVDGSKVHVNP
AFAKEGFKTRTNACPMLKRPALHPLAMLNAVVDVHTKCCVAHSLTSHFNE
RKGISDLLAELTKGDILVFDRGYYSAELLRAILHAKMHAVFRLRVNAFQG
CRRFFESNRVEMKVPIVGAGLMRLVKYRIDGRWYACLTTLPQDEFDRGKI
QKLYGDRWRVEEFFKRLKSSLFLETSHSRTTRGFRQEVEMRILVDTITLQ
SQTKLN
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mRNA from alignment at P-wetherbeei_contig10402:1376..2293-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig10402.1.1 ID=mRNA_P-wetherbeei_contig10402.1.1|Name=mRNA_P-wetherbeei_contig10402.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=918bp|location=Sequence derived from alignment at P-wetherbeei_contig10402:1376..2293- (Phaeothamnion wetherbeei SAG_119_79)
ATGAGTCATGATATTGTGCACAAGGTGAATAAAGCATTCAAAGAGATAGA TTCGCGGTGGATACAACGCGATCGAAAGCTTAACACCCTCAACATCTTCT CTGCTATGCACCAGTCATTTGTCCGTAAACGTGGGATTTCTCACGTACTC GAAGAGATGTGTGATGTCTCAGCAACTGCGCTTTCAAAAGCTCGTGTAAA AATACCGGACGGCGTATTTGCGGATGTCAATAGACAACTGGTGAGAACAT GTGGACCCAGGGTGCTTGCTGTAGATGGCTCAAAAGTACACGTAAATCCA GCTTTTGCAAAAGAGGGATTCAAGACTCGTACAAATGCTTGTCCAATGTT GAAAAGACCAGCATTACACCCACTTGCAATGCTCAATGCTGTTGTAGACG TGCATACCAAATGCTGTGTTGCACATTCACTGACGTCCCATTTCAATGAG AGAAAGGGAATTTCTGACCTTCTCGCGGAACTGACAAAGGGTGATATATT GGTATTCGACAGGGGGTATTATTCAGCAGAGCTACTGAGAGCCATTCTAC ATGCTAAGATGCATGCGGTGTTTCGTCTCCGTGTTAACGCATTCCAAGGG TGCAGGAGGTTTTTTGAAAGTAATCGAGTTGAGATGAAAGTCCCAATTGT TGGTGCAGGGCTAATGCGCCTGGTGAAATATCGAATAGATGGAAGGTGGT ATGCTTGCCTCACTACATTACCTCAGGATGAGTTTGACAGAGGCAAGATA CAGAAGCTATATGGTGATCGATGGAGAGTTGAAGAGTTTTTCAAGCGATT GAAAAGCAGCCTCTTTTTAGAGACATCACATTCACGGACAACACGCGGGT TTCGACAAGAAGTGGAAATGCGAATTCTCGTTGACACGATTACTCTTCAA TCTCAAACCAAACTCAAT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig10402:1376..2293-

>mRNA_P-wetherbeei_contig10402.1.1 ID=mRNA_P-wetherbeei_contig10402.1.1|Name=mRNA_P-wetherbeei_contig10402.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=918bp|location=Sequence derived from alignment at P-wetherbeei_contig10402:1376..2293- (Phaeothamnion wetherbeei SAG_119_79)
ATGAGTCATGATATTGTGCACAAGGTGAATAAAGCATTCAAAGAGATAGA
TTCGCGGTGGATACAACGCGATCGAAAGCTTAACACCCTCAACATCTTCT
CTGCTATGCACCAGTCATTTGTCCGTAAACGTGGGATTTCTCACGTACTC
GAAGAGATGTGTGATGTCTCAGCAACTGCGCTTTCAAAAGCTCGTGTAAA
AATACCGGACGGCGTATTTGCGGATGTCAATAGACAACTGGTGAGAACAT
GTGGACCCAGGGTGCTTGCTGTAGATGGCTCAAAAGTACACGTAAATCCA
GCTTTTGCAAAAGAGGGATTCAAGACTCGTACAAATGCTTGTCCAATGTT
GAAAAGACCAGCATTACACCCACTTGCAATGCTCAATGCTGTTGTAGACG
TGCATACCAAATGCTGTGTTGCACATTCACTGACGTCCCATTTCAATGAG
AGAAAGGGAATTTCTGACCTTCTCGCGGAACTGACAAAGGGTGATATATT
GGTATTCGACAGGGGGTATTATTCAGCAGAGCTACTGAGAGCCATTCTAC
ATGCTAAGATGCATGCGGTGTTTCGTCTCCGTGTTAACGCATTCCAAGGG
TGCAGGAGGTTTTTTGAAAGTAATCGAGTTGAGATGAAAGTCCCAATTGT
TGGTGCAGGGCTAATGCGCCTGGTGAAATATCGAATAGATGGAAGGTGGT
ATGCTTGCCTCACTACATTACCTCAGGATGAGTTTGACAGAGGCAAGATA
CAGAAGCTATATGGTGATCGATGGAGAGTTGAAGAGTTTTTCAAGCGATT
GAAAAGCAGCCTCTTTTTAGAGACATCACATTCACGGACAACACGCGGGT
TTCGACAAGAAGTGGAAATGCGAATTCTCGTTGACACGATTACTCTTCAA
TCTCAAACCAAACTCAAT
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