mRNA_P-wetherbeei_contig10400.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig10400.1.1
Unique NamemRNA_P-wetherbeei_contig10400.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig10400.1.1 vs. uniprot
Match: A0A431M6L4_9BRAD (TolC family protein n=10 Tax=Proteobacteria TaxID=1224 RepID=A0A431M6L4_9BRAD)

HSP 1 Score: 717 bits (1850), Expect = 3.390e-253
Identity = 385/392 (98.21%), Postives = 388/392 (98.98%), Query Frame = 1
Query:    1 SPAMAADQILPGTTAESVVAVAKRLNPTVAAAALEFDAAVHKIGTAGVLADPTLILEAWDVNRQGVGQRRIGIDQEIKLWGKYGLERNVAQADADAAKFQGRATVTELIAQVIAAHGEYNAAYEAVGVATEIKRRYDETLGLLRSRYGTTSVDRQDVIKAEIEAATADGDVVRRQGEQKAAAARLNALIGRPSLAPLAAPTGFRALKAVSLAQVQALARSANPMLALAGAQSNSAAQTKSLTDLNYYPDVTLGAKYVQRPGTEDTGEFMLGVKLPLHYEVKDAEQRAAGARLGAAQARGEALRLRVDGQIADAWFSVDALRKVVQIYASRQLPPARSSLDNARNGFQAGTSDLSSVFEAERRLRAVQLDLLKLKVELQTKYAEMERLAGGSL 1176
            SPA+AA+Q LPG T ESVVAVAKRLNPTVAAAALEFDAAVHKIGTAGVLADPTLILEAWDVNRQGVGQRRIGIDQE+KLWGKYGLERNVA ADADAAKFQGRATVTELIAQVIAAHGEYNAAYEAVGVATEIKRRYDETLGLLRSRYGTTSVDRQDVIKAEIEAATADGDVVRRQGEQKAAAARLNALIGRPSLAPLAAPTGFRALKAVSLAQVQALARSANPMLALAGAQSNSAAQTKSLTDLNYYPDVTLGAKYVQRPGTEDTGEFMLGVKLPLHYEVKDAEQRAAGARLGAAQARGEALRLRVDGQIADAWFSVDALRKVVQIYASRQLPPARSSLDNARNGFQAGTSDLSSVFEAERRLRAVQLDLLKLKVELQTKYAEMERLAGGSL
Sbjct:   23 SPALAAEQTLPGATTESVVAVAKRLNPTVAAAALEFDAAVHKIGTAGVLADPTLILEAWDVNRQGVGQRRIGIDQELKLWGKYGLERNVAMADADAAKFQGRATVTELIAQVIAAHGEYNAAYEAVGVATEIKRRYDETLGLLRSRYGTTSVDRQDVIKAEIEAATADGDVVRRQGEQKAAAARLNALIGRPSLAPLAAPTGFRALKAVSLAQVQALARSANPMLALAGAQSNSAAQTKSLTDLNYYPDVTLGAKYVQRPGTEDTGEFMLGVKLPLHYEVKDAEQRAAGARLGAAQARGEALRLRVDGQIADAWFSVDALRKVVQIYASRQLPPARSSLDNARNGFQAGTSDLSSVFEAERRLRAVQLDLLKLKVELQTKYAEMERLAGGSL 414          
BLAST of mRNA_P-wetherbeei_contig10400.1.1 vs. uniprot
Match: A0A3S0D8J7_9BRAD (Efflux RND transporter periplasmic adaptor subunit n=3 Tax=Proteobacteria TaxID=1224 RepID=A0A3S0D8J7_9BRAD)

HSP 1 Score: 714 bits (1844), Expect = 2.860e-251
Identity = 367/393 (93.38%), Postives = 379/393 (96.44%), Query Frame = 3
Query: 1176 MRRPVGALLAFTAILAAGMVGLAVGRSSAPLPGWLSAVLPAAAKPSSAQPAATGPIVYYRDPDGAPDYSMTPRKTPSGKEYSAVRASEDVSFEEQAPEAMTAKGGERGRIKFYRNPMGLPDTSPTPKKDSMGMDYLPVYEGEQDDDSSVKVSAGKLQKAGVQTEVAERRTLNTMVRAPGTVQQDERRVSVVSLRFEGFIDTVDNVTTGMHVRKGQPLMRIYGPNLSSAAAEYLSALNARPEAGINNQALKGARRRLENLGAPDAFIADIERAREVPVYMNWPAPQDGEIVERTAVNGMRAAPGDILFRIVDRNFVWVMVDVAERDLALIEVGQKVVVRPRAYPDRPFTGKVTVIYPNLRAETRTARVRIELPNPDDVLRPDMYAEVEIATGTD 2354
            MR PVGALLAFTAILAAG+VGLAVGRSSAPLPGWLSAVLPA AKPSSAQPAATG IVYYRDPDGAPDYSMTPRKTPSGKEYSAVRASEDVSFEEQAPEAMTAKGGERGRIKFYRNPMGLPDTSPTPKKDSMGMDYLPVYEGEQDDDSSVKVSAGKLQKAGVQTEVAERRTLNTMVRAPGTVQQDERRVSVVSLRFEGFIDTVDNVTTG HVR+GQPLMRIYGPNLSSAAAEYLSALNARPEAGI+ QALKGARRRLENLGAPD FIADIER REVPVY+NWPAPQDGEIVERTAVNGMRAAPGD+LFRIVD + VWVMVDVAERDLALIEVGQ   VR RAYP+RPFTGKVTVIYP+L+ ETRTAR+RIELPNPDDVLRPDMYA+VEIATGT+
Sbjct:    1 MRWPVGALLAFTAILAAGVVGLAVGRSSAPLPGWLSAVLPAVAKPSSAQPAATGQIVYYRDPDGAPDYSMTPRKTPSGKEYSAVRASEDVSFEEQAPEAMTAKGGERGRIKFYRNPMGLPDTSPTPKKDSMGMDYLPVYEGEQDDDSSVKVSAGKLQKAGVQTEVAERRTLNTMVRAPGTVQQDERRVSVVSLRFEGFIDTVDNVTTGTHVRRGQPLMRIYGPNLSSAAAEYLSALNARPEAGISGQALKGARRRLENLGAPDGFIADIERTREVPVYLNWPAPQDGEIVERTAVNGMRAAPGDVLFRIVDHDVVWVMVDVAERDLALIEVGQTAAVRLRAYPNRPFTGKVTVIYPHLKPETRTARIRIELPNPDDVLRPDMYADVEIATGTE 393          
BLAST of mRNA_P-wetherbeei_contig10400.1.1 vs. uniprot
Match: UPI001BA58B16 (efflux RND transporter periplasmic adaptor subunit n=1 Tax=Bradyrhizobium manausense TaxID=989370 RepID=UPI001BA58B16)

HSP 1 Score: 707 bits (1824), Expect = 3.190e-248
Identity = 363/394 (92.13%), Postives = 377/394 (95.69%), Query Frame = 3
Query: 1176 MRRPVGALLAFTAILAAGMVGLAVGRSSAPLPGWLSAVLPAAAKPSSAQPAATGPIVYYRDPDGAPDYSMTPRKTPSGKEYSAVRASEDVSFEEQ-APEAMTAKGGERGRIKFYRNPMGLPDTSPTPKKDSMGMDYLPVYEGEQDDDSSVKVSAGKLQKAGVQTEVAERRTLNTMVRAPGTVQQDERRVSVVSLRFEGFIDTVDNVTTGMHVRKGQPLMRIYGPNLSSAAAEYLSALNARPEAGINNQALKGARRRLENLGAPDAFIADIERAREVPVYMNWPAPQDGEIVERTAVNGMRAAPGDILFRIVDRNFVWVMVDVAERDLALIEVGQKVVVRPRAYPDRPFTGKVTVIYPNLRAETRTARVRIELPNPDDVLRPDMYAEVEIATGTD 2354
            MRRP+ AL   +AILAAG++GLAVGRSS PLPGWLSA LPAAAK SSAQP A GPIVYYRDPDGAP YS+TP+KT SGK+YSAVR SED+SFEE+ APEAMTAK GERGRIKFYRNPMGLPDTSPTPKKDSMGMDYLPVYEGEQDDDSSVKVSAGKLQKAGVQTEVAERR+LNTMVRAPGTVQQDERRVSV+SLRFEGFIDTVDNVTTG HVRKGQPLMRIYGPNLSSAAAEYLSALNARPEAGINNQALKGARRRLENLGAPDAFI DIERARE+PVYMNWPAPQDGEIVERTAVNGMRAAPGDILFRIVDRN VWVMVDVAERDLALIEVGQKVVVRPRAYPDRPFTGKVTVIYPNLRAETRTARVRIELPNPDDVLRPDMYA+VEIATGT+
Sbjct:    1 MRRPLSALFTLSAILAAGVLGLAVGRSSVPLPGWLSAALPAAAKQSSAQPTARGPIVYYRDPDGAPAYSLTPKKTSSGKDYSAVRTSEDLSFEEEEAPEAMTAKSGERGRIKFYRNPMGLPDTSPTPKKDSMGMDYLPVYEGEQDDDSSVKVSAGKLQKAGVQTEVAERRSLNTMVRAPGTVQQDERRVSVISLRFEGFIDTVDNVTTGTHVRKGQPLMRIYGPNLSSAAAEYLSALNARPEAGINNQALKGARRRLENLGAPDAFIVDIERAREIPVYMNWPAPQDGEIVERTAVNGMRAAPGDILFRIVDRNVVWVMVDVAERDLALIEVGQKVVVRPRAYPDRPFTGKVTVIYPNLRAETRTARVRIELPNPDDVLRPDMYADVEIATGTE 394          
BLAST of mRNA_P-wetherbeei_contig10400.1.1 vs. uniprot
Match: A0A3S0GDW7_9BRAD (TolC family protein n=4 Tax=Bradyrhizobiaceae TaxID=41294 RepID=A0A3S0GDW7_9BRAD)

HSP 1 Score: 684 bits (1764), Expect = 1.910e-240
Identity = 360/392 (91.84%), Postives = 380/392 (96.94%), Query Frame = 1
Query:    1 SPAMAADQILPGTTAESVVAVAKRLNPTVAAAALEFDAAVHKIGTAGVLADPTLILEAWDVNRQGVGQRRIGIDQEIKLWGKYGLERNVAQADADAAKFQGRATVTELIAQVIAAHGEYNAAYEAVGVATEIKRRYDETLGLLRSRYGTTSVDRQDVIKAEIEAATADGDVVRRQGEQKAAAARLNALIGRPSLAPLAAPTGFRALKAVSLAQVQALARSANPMLALAGAQSNSAAQTKSLTDLNYYPDVTLGAKYVQRPGTEDTGEFMLGVKLPLHYEVKDAEQRAAGARLGAAQARGEALRLRVDGQIADAWFSVDALRKVVQIYASRQLPPARSSLDNARNGFQAGTSDLSSVFEAERRLRAVQLDLLKLKVELQTKYAEMERLAGGSL 1176
            SPA AA+Q LPG T ESVVA+AKRLNPTVAAA+L+FDAAVHKIGTAGVLADPTLILEAWDVNR GVGQRRIG++QE KLWGKYGLERNVAQADADAAKFQGRATV +LIAQV+AAHGEYNAAYEAVG++ EIKRRYDE LGLLRSRYGTTSVD+QDVI+AEIEAATA+GDV+RRQGEQKAAAARLNALIGRPSLAPL APTGFR LKAVSLAQVQALARSANPMLALAGAQSNSAAQTKSLTDLNYYPDVTLGAKYVQRPGTEDTGEFMLGVKLPLHYEVKDAEQRAAGARLGAAQAR EALRLR+DGQ+ADAWFSVDALR+VVQIYASRQLPP+RSS+DNARNGFQAGTSDLSSVFE+ERRLRAVQLDLLKLKVELQTKYAEMERLAGGSL
Sbjct:    5 SPAAAAEQSLPGATVESVVAIAKRLNPTVAAASLDFDAAVHKIGTAGVLADPTLILEAWDVNRFGVGQRRIGLEQEFKLWGKYGLERNVAQADADAAKFQGRATVVDLIAQVVAAHGEYNAAYEAVGISVEIKRRYDEILGLLRSRYGTTSVDQQDVIRAEIEAATAEGDVIRRQGEQKAAAARLNALIGRPSLAPLTAPTGFRTLKAVSLAQVQALARSANPMLALAGAQSNSAAQTKSLTDLNYYPDVTLGAKYVQRPGTEDTGEFMLGVKLPLHYEVKDAEQRAAGARLGAAQARNEALRLRIDGQVADAWFSVDALRRVVQIYASRQLPPSRSSVDNARNGFQAGTSDLSSVFESERRLRAVQLDLLKLKVELQTKYAEMERLAGGSL 396          
BLAST of mRNA_P-wetherbeei_contig10400.1.1 vs. uniprot
Match: UPI0003F82CBE (TolC family protein n=1 Tax=Bradyrhizobium sp. OHSU_III TaxID=1297865 RepID=UPI0003F82CBE)

HSP 1 Score: 683 bits (1763), Expect = 5.300e-240
Identity = 360/392 (91.84%), Postives = 379/392 (96.68%), Query Frame = 1
Query:    1 SPAMAADQILPGTTAESVVAVAKRLNPTVAAAALEFDAAVHKIGTAGVLADPTLILEAWDVNRQGVGQRRIGIDQEIKLWGKYGLERNVAQADADAAKFQGRATVTELIAQVIAAHGEYNAAYEAVGVATEIKRRYDETLGLLRSRYGTTSVDRQDVIKAEIEAATADGDVVRRQGEQKAAAARLNALIGRPSLAPLAAPTGFRALKAVSLAQVQALARSANPMLALAGAQSNSAAQTKSLTDLNYYPDVTLGAKYVQRPGTEDTGEFMLGVKLPLHYEVKDAEQRAAGARLGAAQARGEALRLRVDGQIADAWFSVDALRKVVQIYASRQLPPARSSLDNARNGFQAGTSDLSSVFEAERRLRAVQLDLLKLKVELQTKYAEMERLAGGSL 1176
            SPA AA+Q LPG T ESVVA+AKRLNPTVAAA+L+FDAAVHKIGTAGVLADPTLILEAWDVNR GVGQRRIG++QE KLWGKYGLERNVAQ DADAAKFQGRATV +LIAQV+AAHGEYNAAYEAVG++ EIKRRYDE LGLLRSRYGTTSVD+QDVIKAEIEAATA+GDV+RRQGEQKAAAARLNALIGRPSLAPL APTGFR LKAVSLAQVQALARSANPMLALAGAQSNSAAQTKSLTDLNYYPDVTLGAKYVQRPGTEDTGEFMLGVKLPLHYEVKDAEQRAAGARLGAAQAR EALRLR+DGQ+ADAWFSVDALR+VVQIYASRQLPP+RSS+DNARNGFQAGTSDLSSVFE+ERRLRAVQLDLLKLKVELQTKYAEMERLAGGSL
Sbjct:   23 SPAAAAEQSLPGATVESVVAIAKRLNPTVAAASLDFDAAVHKIGTAGVLADPTLILEAWDVNRFGVGQRRIGLEQEFKLWGKYGLERNVAQTDADAAKFQGRATVVDLIAQVVAAHGEYNAAYEAVGISVEIKRRYDEILGLLRSRYGTTSVDQQDVIKAEIEAATAEGDVIRRQGEQKAAAARLNALIGRPSLAPLTAPTGFRTLKAVSLAQVQALARSANPMLALAGAQSNSAAQTKSLTDLNYYPDVTLGAKYVQRPGTEDTGEFMLGVKLPLHYEVKDAEQRAAGARLGAAQARNEALRLRIDGQVADAWFSVDALRRVVQIYASRQLPPSRSSVDNARNGFQAGTSDLSSVFESERRLRAVQLDLLKLKVELQTKYAEMERLAGGSL 414          
BLAST of mRNA_P-wetherbeei_contig10400.1.1 vs. uniprot
Match: A0A3S0EBI1_9BRAD (Efflux RND transporter periplasmic adaptor subunit n=2 Tax=Bradyrhizobiaceae TaxID=41294 RepID=A0A3S0EBI1_9BRAD)

HSP 1 Score: 667 bits (1722), Expect = 8.780e-233
Identity = 338/393 (86.01%), Postives = 365/393 (92.88%), Query Frame = 3
Query: 1176 MRRPVGALLAFTAILAAGMVGLAVGRSSAPLPGWLSAVLPAAAKPSSAQPAATGPIVYYRDPDGAPDYSMTPRKTPSGKEYSAVRASEDVSFEEQAPEAMTAKGGERGRIKFYRNPMGLPDTSPTPKKDSMGMDYLPVYEGEQDDDSSVKVSAGKLQKAGVQTEVAERRTLNTMVRAPGTVQQDERRVSVVSLRFEGFIDTVDNVTTGMHVRKGQPLMRIYGPNLSSAAAEYLSALNARPEAGINNQALKGARRRLENLGAPDAFIADIERAREVPVYMNWPAPQDGEIVERTAVNGMRAAPGDILFRIVDRNFVWVMVDVAERDLALIEVGQKVVVRPRAYPDRPFTGKVTVIYPNLRAETRTARVRIELPNPDDVLRPDMYAEVEIATGTD 2354
            MRRPVG  LA  AIL+AG+ GLAVGRS+APLPGW+SA+LPAAA P S +PA TGPI+YYRDPDG P+Y++ P+KT +GKEYSAV ASEDVSFEE +P+AM  K G  G+IKFYRNPMGLPDTSPTPKKDSMGMDYLPVYEGE DDDSSVK+SAGKLQKAGVQTEVAERRTLNTMVRAPGTVQQDERRVSVVSLRFEGFIDTVDNVTTG HVRKGQPLMRIYGPNLSSAAAEYLSALNARP+AGI+NQALKGARRRLENLGAPDAFI +IER REVPVYMNWPAPQDGEIVERTAVNGMRAAPGD+LFRIV+   VWVMVD+AERDLALIEVGQK VVR RAYPDRPFTGKVTVIYP+L+AETRTAR+RIELPNPDDVLRPDMYA+VEIATGT+
Sbjct:    1 MRRPVGNFLALFAILSAGLGGLAVGRSNAPLPGWISAMLPAAATPVSDRPAPTGPIIYYRDPDGVPNYALAPKKTAAGKEYSAVHASEDVSFEEPSPDAMPPKAGGAGKIKFYRNPMGLPDTSPTPKKDSMGMDYLPVYEGELDDDSSVKISAGKLQKAGVQTEVAERRTLNTMVRAPGTVQQDERRVSVVSLRFEGFIDTVDNVTTGTHVRKGQPLMRIYGPNLSSAAAEYLSALNARPDAGISNQALKGARRRLENLGAPDAFIGEIERTREVPVYMNWPAPQDGEIVERTAVNGMRAAPGDVLFRIVNHEVVWVMVDIAERDLALIEVGQKAVVRLRAYPDRPFTGKVTVIYPHLKAETRTARIRIELPNPDDVLRPDMYADVEIATGTE 393          
BLAST of mRNA_P-wetherbeei_contig10400.1.1 vs. uniprot
Match: A0A161QMA8_9BRAD (Transporter n=3 Tax=Tardiphaga robiniae TaxID=943830 RepID=A0A161QMA8_9BRAD)

HSP 1 Score: 664 bits (1714), Expect = 1.090e-232
Identity = 347/391 (88.75%), Postives = 371/391 (94.88%), Query Frame = 1
Query:    4 PAMAADQILPGTTAESVVAVAKRLNPTVAAAALEFDAAVHKIGTAGVLADPTLILEAWDVNRQGVGQRRIGIDQEIKLWGKYGLERNVAQADADAAKFQGRATVTELIAQVIAAHGEYNAAYEAVGVATEIKRRYDETLGLLRSRYGTTSVDRQDVIKAEIEAATADGDVVRRQGEQKAAAARLNALIGRPSLAPLAAPTGFRALKAVSLAQVQALARSANPMLALAGAQSNSAAQTKSLTDLNYYPDVTLGAKYVQRPGTEDTGEFMLGVKLPLHYEVKDAEQRAAGARLGAAQARGEALRLRVDGQIADAWFSVDALRKVVQIYASRQLPPARSSLDNARNGFQAGTSDLSSVFEAERRLRAVQLDLLKLKVELQTKYAEMERLAGGSL 1176
            P  AA+Q +PG T ESVVA+AKRLNPTVAAA+L+FDAAV K+GTAGV+ADPTLILEAWDVNRQGVGQRRIG DQEIKLWGKYGLERN+AQ+DADAAKFQGRATVTELIAQV+AAHGEYNAAYEAVG+ATEIKRRYDE LGLLRSRYGTTSVDRQDVIKAE+EAATA+GDVVRRQGEQK+AAARLNALIGRP+LAPLAAPTGFR ++ VSLAQ QAL RSANPMLALAGAQSNSAAQ KSLTDLNYYPDV +GAKYVQRPGTEDTGEF LGVKLPLHYEVKDAEQRAAGARLGAAQAR EALRLR+DGQIADAWF VDALRKVVQIY SR LPPARSS+DNARNGFQAG+SDLSSVFE+ERR RA+QLDLLKLKVELQTKYA+MERLAGGSL
Sbjct:   17 PVAAAEQTMPGATVESVVAIAKRLNPTVAAASLDFDAAVRKVGTAGVMADPTLILEAWDVNRQGVGQRRIGFDQEIKLWGKYGLERNIAQSDADAAKFQGRATVTELIAQVVAAHGEYNAAYEAVGIATEIKRRYDELLGLLRSRYGTTSVDRQDVIKAEMEAATAEGDVVRRQGEQKSAAARLNALIGRPALAPLAAPTGFRTVRPVSLAQAQALGRSANPMLALAGAQSNSAAQIKSLTDLNYYPDVNVGAKYVQRPGTEDTGEFTLGVKLPLHYEVKDAEQRAAGARLGAAQARNEALRLRIDGQIADAWFGVDALRKVVQIYTSRLLPPARSSIDNARNGFQAGSSDLSSVFESERRYRAIQLDLLKLKVELQTKYADMERLAGGSL 407          
BLAST of mRNA_P-wetherbeei_contig10400.1.1 vs. uniprot
Match: A0A163XQ15_9BRAD (Efflux transporter periplasmic adaptor subunit n=4 Tax=Tardiphaga robiniae TaxID=943830 RepID=A0A163XQ15_9BRAD)

HSP 1 Score: 647 bits (1670), Expect = 6.560e-225
Identity = 328/393 (83.46%), Postives = 357/393 (90.84%), Query Frame = 3
Query: 1176 MRRPVGALLAFTAILAAGMVGLAVGRSSAPLPGWLSAVLPAAAKPSSAQPAATGPIVYYRDPDGAPDYSMTPRKTPSGKEYSAVRASEDVSFEEQAPEAMTAKGGERGRIKFYRNPMGLPDTSPTPKKDSMGMDYLPVYEGEQDDDSSVKVSAGKLQKAGVQTEVAERRTLNTMVRAPGTVQQDERRVSVVSLRFEGFIDTVDNVTTGMHVRKGQPLMRIYGPNLSSAAAEYLSALNARPEAGINNQALKGARRRLENLGAPDAFIADIERAREVPVYMNWPAPQDGEIVERTAVNGMRAAPGDILFRIVDRNFVWVMVDVAERDLALIEVGQKVVVRPRAYPDRPFTGKVTVIYPNLRAETRTARVRIELPNPDDVLRPDMYAEVEIATGTD 2354
            MRRPV ALL  +A+L AG+ G+AVGRS+ PLPGW SA+ PA A PS AQPAAT PIVYYRDPDGAP+YS  P+KT SG+EY A+R+SEDVSFEE+APE MTAKGG+ GRI+FYRNPMGLPDTSPTPKKDSMGMDYLPVYEGEQDDDSSVKVSAGKLQKAGVQTEVAE RTLNTMVRAPGTV++DERR SVVSLRFEGFIDTV+NVTTG HV KGQPLMRIYGPNLSSAAAEYLSAL+ R    +  QALKGARRRLENLGAP+ FIADIERAREVPVY+ WPAPQDGEIVERTAVNGMRAAPG++LFRI D N VWVMVDVAERDLALIEVGQKV VRPRAYPDRPF GKVTVIYP+L+AETRTAR+RIELPNPD+VLRPDMYA+VEIATGT+
Sbjct:    1 MRRPVSALLIVSAVLVAGVAGVAVGRSNGPLPGWFSAIFPATADPSPAQPAATEPIVYYRDPDGAPNYSPAPKKTASGREYLAIRSSEDVSFEEKAPETMTAKGGQPGRIRFYRNPMGLPDTSPTPKKDSMGMDYLPVYEGEQDDDSSVKVSAGKLQKAGVQTEVAELRTLNTMVRAPGTVEEDERRKSVVSLRFEGFIDTVENVTTGTHVHKGQPLMRIYGPNLSSAAAEYLSALDGRATGALPIQALKGARRRLENLGAPETFIADIERAREVPVYVIWPAPQDGEIVERTAVNGMRAAPGEVLFRIADHNVVWVMVDVAERDLALIEVGQKVTVRPRAYPDRPFIGKVTVIYPHLKAETRTARIRIELPNPDEVLRPDMYADVEIATGTE 393          
BLAST of mRNA_P-wetherbeei_contig10400.1.1 vs. uniprot
Match: UPI001BA7C541 (efflux RND transporter periplasmic adaptor subunit n=1 Tax=unclassified Bradyrhizobium TaxID=2631580 RepID=UPI001BA7C541)

HSP 1 Score: 644 bits (1660), Expect = 2.140e-223
Identity = 325/393 (82.70%), Postives = 357/393 (90.84%), Query Frame = 3
Query: 1176 MRRPVGALLAFTAILAAGMVGLAVGRSSAPLPGWLSAVLPAAAKPSSAQPAATGPIVYYRDPDGAPDYSMTPRKTPSGKEYSAVRASEDVSFEEQAPEAMTAKGGERGRIKFYRNPMGLPDTSPTPKKDSMGMDYLPVYEGEQDDDSSVKVSAGKLQKAGVQTEVAERRTLNTMVRAPGTVQQDERRVSVVSLRFEGFIDTVDNVTTGMHVRKGQPLMRIYGPNLSSAAAEYLSALNARPEAGINNQALKGARRRLENLGAPDAFIADIERAREVPVYMNWPAPQDGEIVERTAVNGMRAAPGDILFRIVDRNFVWVMVDVAERDLALIEVGQKVVVRPRAYPDRPFTGKVTVIYPNLRAETRTARVRIELPNPDDVLRPDMYAEVEIATGTD 2354
            M RP+G LL  +AI+ AG+ GLAVGRS+APLP WL  VLPAAAK S  Q  A GPI+YYRDPDG P YS+TP+KT +GK+Y AVR+SED+SFE +APE MTAKGG+RG+I++YRNPMGLPDTSPTPKKDSMGM YLPVYEGEQDDDSSVKVSAGKLQKAGVQTE+AERRTLNTMVRAPG V++DERR SVVSLRFEGFIDTV NVTTG HV KGQPLMRIYGPNLSSAAAEYLSALNARP+AGI NQALKGARRRLENLGAPD+FIADIE  RE+PVYMNWPAPQDGEIVERTAVNGMRAAPGD+LFRIVD + VWVMVDVAERDL LIEVGQKV VRPRAYPDRPF GKV++IYP+L+AETRTAR+RIEL NPDDVLRPDMYA+VEIATGT+
Sbjct:    1 MNRPIGVLLITSAIMVAGVFGLAVGRSNAPLPEWLDGVLPAAAKQSPRQGEAPGPILYYRDPDGLPAYSLTPKKTSAGKDYLAVRSSEDLSFEAKAPETMTAKGGDRGKIRYYRNPMGLPDTSPTPKKDSMGMAYLPVYEGEQDDDSSVKVSAGKLQKAGVQTELAERRTLNTMVRAPGIVEEDERRKSVVSLRFEGFIDTVGNVTTGTHVYKGQPLMRIYGPNLSSAAAEYLSALNARPDAGIGNQALKGARRRLENLGAPDSFIADIEHTREIPVYMNWPAPQDGEIVERTAVNGMRAAPGDVLFRIVDHDVVWVMVDVAERDLGLIEVGQKVTVRPRAYPDRPFIGKVSLIYPHLKAETRTARIRIELSNPDDVLRPDMYADVEIATGTE 393          
BLAST of mRNA_P-wetherbeei_contig10400.1.1 vs. uniprot
Match: UPI001FF98D97 (TolC family protein n=2 Tax=unclassified Bradyrhizobium TaxID=2631580 RepID=UPI001FF98D97)

HSP 1 Score: 638 bits (1645), Expect = 4.000e-222
Identity = 334/392 (85.20%), Postives = 366/392 (93.37%), Query Frame = 1
Query:    1 SPAMAADQILPGTTAESVVAVAKRLNPTVAAAALEFDAAVHKIGTAGVLADPTLILEAWDVNRQGVGQRRIGIDQEIKLWGKYGLERNVAQADADAAKFQGRATVTELIAQVIAAHGEYNAAYEAVGVATEIKRRYDETLGLLRSRYGTTSVDRQDVIKAEIEAATADGDVVRRQGEQKAAAARLNALIGRPSLAPLAAPTGFRALKAVSLAQVQALARSANPMLALAGAQSNSAAQTKSLTDLNYYPDVTLGAKYVQRPGTEDTGEFMLGVKLPLHYEVKDAEQRAAGARLGAAQARGEALRLRVDGQIADAWFSVDALRKVVQIYASRQLPPARSSLDNARNGFQAGTSDLSSVFEAERRLRAVQLDLLKLKVELQTKYAEMERLAGGSL 1176
            SPA A +Q +PG T ESVVA+AKRLNPTVAAA+LEFDAAVHKIGTAGVLADPTLILEAWDVNRQGVGQRRIG +Q++KLW KYGLER++A++DADAAKFQGRATVTELIAQV+AAHGEYNAAYEAV ++TEIKRR DE LGL+RSRYG TSVD+QDVI+AE+EAATA+GDVVRRQGE K+AAARLNALIGRPSLAPLA PTGFRA+K +SLAQ QALARSANPMLALAGAQSN+AAQTKSLTDLNYYPDVTLGAKYVQRPG EDTGEFMLGVKLPL Y+ KDAEQRAAG+RLGAAQAR EALRLR+DGQ+ADAW+SVDALRKVVQIYASRQ+P AR+SLD ARNGFQAGT+DL  VFEAERRLR VQ+DLLKLKVELQ K AEMERLAGGSL
Sbjct:   23 SPAAAGEQTMPGATVESVVAIAKRLNPTVAAASLEFDAAVHKIGTAGVLADPTLILEAWDVNRQGVGQRRIGFEQDLKLWSKYGLERDIARSDADAAKFQGRATVTELIAQVVAAHGEYNAAYEAVAISTEIKRRDDEILGLVRSRYGATSVDQQDVIRAEVEAATAEGDVVRRQGELKSAAARLNALIGRPSLAPLAPPTGFRAVKTISLAQAQALARSANPMLALAGAQSNAAAQTKSLTDLNYYPDVTLGAKYVQRPGMEDTGEFMLGVKLPLQYQAKDAEQRAAGSRLGAAQARNEALRLRIDGQVADAWYSVDALRKVVQIYASRQIPAARTSLDTARNGFQAGTTDLFFVFEAERRLRTVQIDLLKLKVELQMKSAEMERLAGGSL 414          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10400.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A431M6L4_9BRAD3.390e-25398.21TolC family protein n=10 Tax=Proteobacteria TaxID=... [more]
A0A3S0D8J7_9BRAD2.860e-25193.38Efflux RND transporter periplasmic adaptor subunit... [more]
UPI001BA58B163.190e-24892.13efflux RND transporter periplasmic adaptor subunit... [more]
A0A3S0GDW7_9BRAD1.910e-24091.84TolC family protein n=4 Tax=Bradyrhizobiaceae TaxI... [more]
UPI0003F82CBE5.300e-24091.84TolC family protein n=1 Tax=Bradyrhizobium sp. OHS... [more]
A0A3S0EBI1_9BRAD8.780e-23386.01Efflux RND transporter periplasmic adaptor subunit... [more]
A0A161QMA8_9BRAD1.090e-23288.75Transporter n=3 Tax=Tardiphaga robiniae TaxID=9438... [more]
A0A163XQ15_9BRAD6.560e-22583.46Efflux transporter periplasmic adaptor subunit n=4... [more]
UPI001BA7C5412.140e-22382.70efflux RND transporter periplasmic adaptor subunit... [more]
UPI001FF98D974.000e-22285.20TolC family protein n=2 Tax=unclassified Bradyrhiz... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10400contigP-wetherbeei_contig10400:1..2354 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1230476.C207_04584
Preferred namecusB
PFAMsCusF_Ec,HlyD_D23,HlyD_D4
Model size2354
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K07798
KEGG TC2.A.6.1.4,8.A.1
KEGG Pathwayko02020,map02020
Hectar predicted targeting categorysignal anchor
Exons1
Evalue3.16e-257
EggNOG OGsCOG0845@1|root,COG0845@2|Bacteria,1MVAS@1224|Proteobacteria,2TTGG@28211|Alphaproteobacteria,3JTB0@41294|Bradyrhizobiaceae
DescriptionBelongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Cds size1416
COG categoryM
BRITEko00000,ko00001,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185867.8977861-CDS-P-wetherbeei_contig10400:0..14161683185867.8977861-CDS-P-wetherbeei_contig10400:0..1416Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10400 1..1416 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185867.9109857-UTR-P-wetherbeei_contig10400:1416..23541683185867.9109857-UTR-P-wetherbeei_contig10400:1416..2354Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig10400 1417..2354 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10400.1.1prot_P-wetherbeei_contig10400.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig10400 1..1416 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig10400.1.1

>prot_P-wetherbeei_contig10400.1.1 ID=prot_P-wetherbeei_contig10400.1.1|Name=mRNA_P-wetherbeei_contig10400.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=472bp
MVQRRCSPQSRADLRIAPIAACTIIPRQRAERFPGRHVRSFLGFRGGAQA
SCRPTRPAEAQGRTSDEIRRNGTSGRGVAMRRPVGALLAFTAILAAGMVG
LAVGRSSAPLPGWLSAVLPAAAKPSSAQPAATGPIVYYRDPDGAPDYSMT
PRKTPSGKEYSAVRASEDVSFEEQAPEAMTAKGGERGRIKFYRNPMGLPD
TSPTPKKDSMGMDYLPVYEGEQDDDSSVKVSAGKLQKAGVQTEVAERRTL
NTMVRAPGTVQQDERRVSVVSLRFEGFIDTVDNVTTGMHVRKGQPLMRIY
GPNLSSAAAEYLSALNARPEAGINNQALKGARRRLENLGAPDAFIADIER
AREVPVYMNWPAPQDGEIVERTAVNGMRAAPGDILFRIVDRNFVWVMVDV
AERDLALIEVGQKVVVRPRAYPDRPFTGKVTVIYPNLRAETRTARVRIEL
PNPDDVLRPDMYAEVEIATGTD
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mRNA from alignment at P-wetherbeei_contig10400:1..2354-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig10400.1.1 ID=mRNA_P-wetherbeei_contig10400.1.1|Name=mRNA_P-wetherbeei_contig10400.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2354bp|location=Sequence derived from alignment at P-wetherbeei_contig10400:1..2354- (Phaeothamnion wetherbeei SAG_119_79)
TCCCCGGCTATGGCCGCCGACCAGATATTGCCGGGAACGACCGCCGAAAG CGTCGTCGCGGTCGCGAAACGCCTCAACCCGACGGTGGCGGCGGCCGCGC TCGAGTTCGATGCCGCGGTCCACAAGATCGGGACAGCAGGCGTATTGGCT GACCCGACCCTCATTCTCGAAGCCTGGGACGTAAACCGGCAGGGCGTGGG ACAGCGCCGCATAGGCATCGACCAGGAGATCAAGCTTTGGGGCAAATACG GCCTCGAGCGCAATGTCGCCCAGGCCGACGCCGATGCAGCAAAATTCCAG GGTCGTGCCACCGTGACCGAACTCATCGCGCAGGTCATTGCAGCGCATGG CGAATACAATGCCGCGTATGAAGCCGTTGGAGTCGCCACCGAAATCAAGC GGCGGTACGACGAGACGCTCGGATTGTTGCGTTCGCGATACGGCACGACA TCGGTCGACCGGCAGGACGTCATCAAGGCCGAGATCGAAGCGGCTACCGC CGACGGCGACGTCGTCCGCCGACAAGGCGAACAGAAGGCAGCGGCGGCCA GGCTGAATGCCCTGATCGGCCGTCCGTCCCTGGCGCCCTTGGCAGCGCCG ACCGGCTTTAGAGCCCTCAAGGCGGTCAGCCTCGCGCAGGTTCAGGCGCT CGCGCGCTCTGCCAACCCGATGCTGGCGCTGGCCGGAGCCCAGAGCAATT CCGCGGCCCAGACCAAATCCCTTACCGACCTCAACTACTATCCCGACGTC ACGCTCGGCGCGAAATACGTGCAGCGGCCCGGGACCGAGGATACCGGCGA GTTCATGCTTGGCGTCAAGCTGCCGCTGCACTATGAGGTCAAGGACGCCG AACAGCGGGCTGCGGGTGCGCGTCTCGGAGCAGCGCAAGCCCGCGGCGAG GCGCTGCGGCTGCGGGTCGACGGACAGATCGCCGACGCATGGTTCAGCGT CGATGCTCTCCGCAAAGTCGTGCAGATCTACGCATCGCGCCAATTGCCGC CTGCACGATCATCCCTCGACAACGCGCGGAACGGTTTCCAGGCCGGCACG TCCGATCTTTCCTCGGTTTTCGAGGCGGAGCGCAGGCTTCGTGCCGTCCA ACTCGACCTGCTGAAGCTCAAGGTAGAACTTCAGACGAAATACGCCGAAA TGGAACGTCTGGCCGGGGGGTCGCTATGAGACGGCCAGTAGGTGCTTTGT TAGCCTTTACGGCGATCCTGGCCGCCGGAATGGTCGGATTGGCCGTCGGA CGTTCAAGCGCTCCGCTTCCAGGATGGCTGTCCGCCGTACTTCCCGCAGC GGCAAAGCCAAGTTCCGCTCAACCGGCTGCGACCGGACCGATCGTCTACT ACCGTGATCCGGACGGCGCGCCCGATTATTCCATGACGCCCAGGAAGACG CCGTCGGGCAAGGAATATTCGGCCGTCCGCGCCAGCGAAGATGTGAGCTT CGAGGAGCAGGCTCCGGAAGCCATGACTGCGAAGGGCGGCGAGCGCGGGC GGATCAAATTCTACCGCAATCCCATGGGCCTTCCGGACACGTCGCCGACG CCGAAAAAGGATTCGATGGGGATGGATTATCTCCCCGTATATGAGGGCGA ACAGGACGACGACTCGTCGGTCAAGGTCAGCGCAGGCAAGCTGCAAAAGG CAGGCGTCCAGACGGAGGTCGCGGAGCGCCGCACCTTGAATACGATGGTC CGCGCACCGGGCACGGTACAACAGGACGAGCGGCGCGTGTCCGTCGTCTC GCTCCGGTTCGAGGGCTTCATCGACACCGTCGACAACGTCACGACCGGCA TGCACGTCCGCAAGGGCCAGCCGTTGATGCGCATCTACGGCCCGAACCTG TCGAGCGCCGCCGCCGAATATCTCTCGGCCCTCAACGCCCGCCCGGAGGC CGGAATCAACAACCAGGCCTTGAAAGGCGCCCGCCGGCGCCTCGAAAACC TCGGCGCGCCCGATGCATTCATCGCGGACATCGAGCGGGCGCGCGAGGTT CCGGTCTACATGAACTGGCCTGCGCCGCAGGATGGCGAGATCGTTGAGCG GACGGCAGTCAACGGCATGCGCGCAGCGCCGGGGGACATCCTGTTCCGGA TAGTCGACCGCAACTTCGTCTGGGTGATGGTCGACGTCGCGGAACGCGAT TTGGCGCTCATAGAAGTCGGGCAGAAAGTCGTCGTGCGGCCCCGGGCATA TCCGGACCGGCCTTTCACAGGAAAGGTCACGGTGATCTATCCGAACCTGA GAGCGGAGACGCGTACGGCGCGGGTCAGAATCGAATTGCCCAATCCGGAC GACGTGCTGCGACCCGACATGTATGCGGAGGTAGAAATCGCCACGGGGAC GGAC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig10400:1..2354-

>mRNA_P-wetherbeei_contig10400.1.1 ID=mRNA_P-wetherbeei_contig10400.1.1|Name=mRNA_P-wetherbeei_contig10400.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1416bp|location=Sequence derived from alignment at P-wetherbeei_contig10400:1..2354- (Phaeothamnion wetherbeei SAG_119_79)
ATGGTTCAGCGTCGATGCTCTCCGCAAAGTCGTGCAGATCTACGCATCGC
GCCAATTGCCGCCTGCACGATCATCCCTCGACAACGCGCGGAACGGTTTC
CAGGCCGGCACGTCCGATCTTTCCTCGGTTTTCGAGGCGGAGCGCAGGCT
TCGTGCCGTCCAACTCGACCTGCTGAAGCTCAAGGTAGAACTTCAGACGA
AATACGCCGAAATGGAACGTCTGGCCGGGGGGTCGCTATGAGACGGCCAG
TAGGTGCTTTGTTAGCCTTTACGGCGATCCTGGCCGCCGGAATGGTCGGA
TTGGCCGTCGGACGTTCAAGCGCTCCGCTTCCAGGATGGCTGTCCGCCGT
ACTTCCCGCAGCGGCAAAGCCAAGTTCCGCTCAACCGGCTGCGACCGGAC
CGATCGTCTACTACCGTGATCCGGACGGCGCGCCCGATTATTCCATGACG
CCCAGGAAGACGCCGTCGGGCAAGGAATATTCGGCCGTCCGCGCCAGCGA
AGATGTGAGCTTCGAGGAGCAGGCTCCGGAAGCCATGACTGCGAAGGGCG
GCGAGCGCGGGCGGATCAAATTCTACCGCAATCCCATGGGCCTTCCGGAC
ACGTCGCCGACGCCGAAAAAGGATTCGATGGGGATGGATTATCTCCCCGT
ATATGAGGGCGAACAGGACGACGACTCGTCGGTCAAGGTCAGCGCAGGCA
AGCTGCAAAAGGCAGGCGTCCAGACGGAGGTCGCGGAGCGCCGCACCTTG
AATACGATGGTCCGCGCACCGGGCACGGTACAACAGGACGAGCGGCGCGT
GTCCGTCGTCTCGCTCCGGTTCGAGGGCTTCATCGACACCGTCGACAACG
TCACGACCGGCATGCACGTCCGCAAGGGCCAGCCGTTGATGCGCATCTAC
GGCCCGAACCTGTCGAGCGCCGCCGCCGAATATCTCTCGGCCCTCAACGC
CCGCCCGGAGGCCGGAATCAACAACCAGGCCTTGAAAGGCGCCCGCCGGC
GCCTCGAAAACCTCGGCGCGCCCGATGCATTCATCGCGGACATCGAGCGG
GCGCGCGAGGTTCCGGTCTACATGAACTGGCCTGCGCCGCAGGATGGCGA
GATCGTTGAGCGGACGGCAGTCAACGGCATGCGCGCAGCGCCGGGGGACA
TCCTGTTCCGGATAGTCGACCGCAACTTCGTCTGGGTGATGGTCGACGTC
GCGGAACGCGATTTGGCGCTCATAGAAGTCGGGCAGAAAGTCGTCGTGCG
GCCCCGGGCATATCCGGACCGGCCTTTCACAGGAAAGGTCACGGTGATCT
ATCCGAACCTGAGAGCGGAGACGCGTACGGCGCGGGTCAGAATCGAATTG
CCCAATCCGGACGACGTGCTGCGACCCGACATGTATGCGGAGGTAGAAAT
CGCCACGGGGACGGAC
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