mRNA_P-wetherbeei_contig10384.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig10384.1.1 vs. uniprot
Match: K3XY83_SETIT (VWFA domain-containing protein n=2 Tax=Poaceae TaxID=4479 RepID=K3XY83_SETIT) HSP 1 Score: 192 bits (489), Expect = 5.960e-58 Identity = 94/169 (55.62%), Postives = 119/169 (70.41%), Query Frame = 1 Query: 1 RHWSAIGDRYQSIGEVVQAMRTAGLESSNLIVGVDFTKSNEWTGGKSFSGRCMHDVSSGVRTPYEASNKALEVLRAVAQTLEPFDDDRLIPCYGFGDSRTSDRAVFSFLPNNAPCNGLDEAVARYRSIARAAELSGPTNFAPLINKAIDIVLANGYTYHILVIIADGQV 507 R +S IGD Y+S+ +V A+ AGLESSNLIVG+DFTKSNEWTG SF+ RC+HD+ S PYE + + + +TL FD+D LIPC+GFGD+ T D+ VFSF P N PCNG +EA+ RYR I L+GPT+FAP+I AI IV + G YH+L+IIADGQV Sbjct: 57 RKYSRIGDDYRSLSQVTDALAQAGLESSNLIVGIDFTKSNEWTGKMSFNRRCLHDIGS-TPNPYE------QAISIIGRTLSAFDEDNLIPCFGFGDASTHDQEVFSFYPENRPCNGFEEALERYREIVPTLRLAGPTSFAPIIETAIGIVDSTGGQYHVLLIIADGQV 218
BLAST of mRNA_P-wetherbeei_contig10384.1.1 vs. uniprot
Match: K3XXT2_SETIT (VWFA domain-containing protein n=1 Tax=Setaria italica TaxID=4555 RepID=K3XXT2_SETIT) HSP 1 Score: 192 bits (489), Expect = 1.490e-57 Identity = 94/169 (55.62%), Postives = 119/169 (70.41%), Query Frame = 1 Query: 1 RHWSAIGDRYQSIGEVVQAMRTAGLESSNLIVGVDFTKSNEWTGGKSFSGRCMHDVSSGVRTPYEASNKALEVLRAVAQTLEPFDDDRLIPCYGFGDSRTSDRAVFSFLPNNAPCNGLDEAVARYRSIARAAELSGPTNFAPLINKAIDIVLANGYTYHILVIIADGQV 507 R +S IGD Y+S+ +V A+ AGLESSNLIVG+DFTKSNEWTG SF+ RC+HD+ S PYE + + + +TL FD+D LIPC+GFGD+ T D+ VFSF P N PCNG +EA+ RYR I L+GPT+FAP+I AI IV + G YH+L+IIADGQV Sbjct: 57 RKYSRIGDDYRSLSQVTDALAQAGLESSNLIVGIDFTKSNEWTGKMSFNRRCLHDIGS-TPNPYE------QAISIIGRTLSAFDEDNLIPCFGFGDASTHDQEVFSFYPENRPCNGFEEALERYREIVPTLRLAGPTSFAPIIETAIGIVDSTGGQYHVLLIIADGQV 218
BLAST of mRNA_P-wetherbeei_contig10384.1.1 vs. uniprot
Match: A0A3Q7I4H8_SOLLC (VWFA domain-containing protein n=1 Tax=Solanum lycopersicum TaxID=4081 RepID=A0A3Q7I4H8_SOLLC) HSP 1 Score: 189 bits (481), Expect = 3.590e-57 Identity = 93/166 (56.02%), Postives = 120/166 (72.29%), Query Frame = 1 Query: 10 SAIGDRYQSIGEVVQAMRTAGLESSNLIVGVDFTKSNEWTGGKSFSGRCMHDVSSGVRTPYEASNKALEVLRAVAQTLEPFDDDRLIPCYGFGDSRTSDRAVFSFLPNNAPCNGLDEAVARYRSIARAAELSGPTNFAPLINKAIDIVLANGYTYHILVIIADGQV 507 S I D ++S+ EVV A+R AGLESSNLI+G+DFTKSNEWTG SF+ R +H V PYE + + + +TL PFD+D LIPC+GFGD+ T D+ VFSF P++ PC+G +EA+ RY+ I +LSGPT+FAP++N AIDIV AN YH+LVIIADGQV Sbjct: 70 SYIADNFKSLDEVVTALREAGLESSNLILGIDFTKSNEWTGKSSFNRRSLHSVGH-TANPYE------QAISIIGRTLSPFDEDNLIPCFGFGDATTHDQHVFSFYPDHRPCDGFEEALTRYKEIVPYLKLSGPTSFAPIVNAAIDIVEANNGQYHVLVIIADGQV 228
BLAST of mRNA_P-wetherbeei_contig10384.1.1 vs. uniprot
Match: A0A453SFZ9_AEGTS (VWFA domain-containing protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453SFZ9_AEGTS) HSP 1 Score: 189 bits (480), Expect = 4.400e-57 Identity = 91/169 (53.85%), Postives = 119/169 (70.41%), Query Frame = 1 Query: 1 RHWSAIGDRYQSIGEVVQAMRTAGLESSNLIVGVDFTKSNEWTGGKSFSGRCMHDVSSGVRTPYEASNKALEVLRAVAQTLEPFDDDRLIPCYGFGDSRTSDRAVFSFLPNNAPCNGLDEAVARYRSIARAAELSGPTNFAPLINKAIDIVLANGYTYHILVIIADGQV 507 R +S IGD Y+S+ +V +A+ AGLESSNLIVG+DFTKSNEWTG S++ RC+HD+ + PYE + + + +TL FD+D LIPC+GFGD+ T D+ VFSF P N PCNG +EA+ RYR I L+GPT+FAP+I AI I + G YH+L+IIADGQV Sbjct: 53 RKYSRIGDDYRSVSQVTEALAQAGLESSNLIVGIDFTKSNEWTGKISYNRRCLHDIGN-TPNPYE------QAISIIGRTLSAFDEDNLIPCFGFGDASTHDQEVFSFYPENQPCNGFEEALERYREIVPTLRLAGPTSFAPIIETAIGIADSTGGQYHVLLIIADGQV 214
BLAST of mRNA_P-wetherbeei_contig10384.1.1 vs. uniprot
Match: A0A446YNV4_TRITD (VWFA domain-containing protein n=2 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446YNV4_TRITD) HSP 1 Score: 189 bits (480), Expect = 4.790e-57 Identity = 91/169 (53.85%), Postives = 119/169 (70.41%), Query Frame = 1 Query: 1 RHWSAIGDRYQSIGEVVQAMRTAGLESSNLIVGVDFTKSNEWTGGKSFSGRCMHDVSSGVRTPYEASNKALEVLRAVAQTLEPFDDDRLIPCYGFGDSRTSDRAVFSFLPNNAPCNGLDEAVARYRSIARAAELSGPTNFAPLINKAIDIVLANGYTYHILVIIADGQV 507 R +S IGD Y+S+ +V +A+ AGLESSNLIVG+DFTKSNEWTG S++ RC+HD+ + PYE + + + +TL FD+D LIPC+GFGD+ T D+ VFSF P N PCNG +EA+ RYR I L+GPT+FAP+I AI I + G YH+L+IIADGQV Sbjct: 56 RKYSRIGDDYRSVSQVTEALAQAGLESSNLIVGIDFTKSNEWTGKISYNRRCLHDIGN-TPNPYE------QAISIIGRTLSAFDEDNLIPCFGFGDASTHDQEVFSFYPENQPCNGFEEALERYREIVPTLRLAGPTSFAPIIETAIGIADSTGGQYHVLLIIADGQV 217
BLAST of mRNA_P-wetherbeei_contig10384.1.1 vs. uniprot
Match: A0A7S0YQE1_9CRYP (Hypothetical protein n=2 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YQE1_9CRYP) HSP 1 Score: 188 bits (478), Expect = 7.410e-57 Identity = 94/165 (56.97%), Postives = 117/165 (70.91%), Query Frame = 1 Query: 13 AIGDRYQSIGEVVQAMRTAGLESSNLIVGVDFTKSNEWTGGKSFSGRCMHDVSSGVRTPYEASNKALEVLRAVAQTLEPFDDDRLIPCYGFGDSRTSDRAVFSFLPNNAPCNGLDEAVARYRSIARAAELSGPTNFAPLINKAIDIVLANGYTYHILVIIADGQV 507 AI D YQSI EV QA+R AGLESSNLI+G+DFTKSN WTG KSF G+C+HD + GV+ PY++ V+ V +TLE FDDD+LIP +GFGDS T+D+ F F P+ PC+ E ++RY I L+GPTNF P+I +AI IV +YHILVIIADGQV Sbjct: 31 AIKDNYQSIQEVQQALRKAGLESSNLILGIDFTKSNTWTGEKSFGGKCLHDCTPGVKNPYQS------VIEIVGRTLEVFDDDKLIPTFGFGDSYTTDKKAFPFFPDRRPCDTFQEVISRYNEITPKITLAGPTNFGPIIREAIKIVQEE-QSYHILVIIADGQV 188
BLAST of mRNA_P-wetherbeei_contig10384.1.1 vs. uniprot
Match: K3XWX1_SETIT (RING-type E3 ubiquitin transferase n=25 Tax=PACMAD clade TaxID=147370 RepID=K3XWX1_SETIT) HSP 1 Score: 192 bits (489), Expect = 1.220e-56 Identity = 94/169 (55.62%), Postives = 119/169 (70.41%), Query Frame = 1 Query: 1 RHWSAIGDRYQSIGEVVQAMRTAGLESSNLIVGVDFTKSNEWTGGKSFSGRCMHDVSSGVRTPYEASNKALEVLRAVAQTLEPFDDDRLIPCYGFGDSRTSDRAVFSFLPNNAPCNGLDEAVARYRSIARAAELSGPTNFAPLINKAIDIVLANGYTYHILVIIADGQV 507 R +S IGD Y+S+ +V A+ AGLESSNLIVG+DFTKSNEWTG SF+ RC+HD+ S PYE + + + +TL FD+D LIPC+GFGD+ T D+ VFSF P N PCNG +EA+ RYR I L+GPT+FAP+I AI IV + G YH+L+IIADGQV Sbjct: 57 RKYSRIGDDYRSLSQVTDALAQAGLESSNLIVGIDFTKSNEWTGKMSFNRRCLHDIGS-TPNPYE------QAISIIGRTLSAFDEDNLIPCFGFGDASTHDQEVFSFYPENRPCNGFEEALERYREIVPTLRLAGPTSFAPIIETAIGIVDSTGGQYHVLLIIADGQV 218
BLAST of mRNA_P-wetherbeei_contig10384.1.1 vs. uniprot
Match: A9U1P8_PHYPA (RING-type E3 ubiquitin transferase n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9U1P8_PHYPA) HSP 1 Score: 190 bits (482), Expect = 1.630e-56 Identity = 97/166 (58.43%), Postives = 122/166 (73.49%), Query Frame = 1 Query: 7 WSAIGDRYQSIGEVVQAMRTAGLESSNLIVGVDFTKSNEWTGGKSFSGRCMHDVSSGVRTPYEASNKALEVLRAVAQTLEPFDDDRLIPCYGFGDSRTSDRAVFSFLPNNAPCNGLDEAVARYRSIARAAELSGPTNFAPLINKAIDIVLANGYTYHILVIIADGQ 504 +S I D Y+S+ EV +A+R GLESSNLIVG+DFTKSNEWTG SF GR +H V + PYE KA+ + V TL PFD+D LIPC+GFGDS T D+ VFSF ++ PC+G+ EA+ RYR+IA L+GPT+FAP+INKA+DIV +G YH+LVIIADGQ Sbjct: 5 YSVIHDNYKSLEEVQRALRDNGLESSNLIVGIDFTKSNEWTGRTSFGGRSLH-VIGHEQNPYE---KAISI---VGTTLSPFDEDNLIPCFGFGDSTTHDKHVFSFFADHRPCDGMKEALVRYRAIAPHVRLAGPTSFAPIINKAVDIVEESGGQYHVLVIIADGQ 163
BLAST of mRNA_P-wetherbeei_contig10384.1.1 vs. uniprot
Match: A0A2K1IJY3_PHYPA (VWFA domain-containing protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1IJY3_PHYPA) HSP 1 Score: 190 bits (482), Expect = 1.900e-56 Identity = 97/168 (57.74%), Postives = 121/168 (72.02%), Query Frame = 1 Query: 4 HWSAIGDRYQSIGEVVQAMRTAGLESSNLIVGVDFTKSNEWTGGKSFSGRCMHDVSSGVRTPYEASNKALEVLRAVAQTLEPFDDDRLIPCYGFGDSRTSDRAVFSFLPNNAPCNGLDEAVARYRSIARAAELSGPTNFAPLINKAIDIVLANGYTYHILVIIADGQV 507 H+ I D Y+S+ EV QA+R AGLESSNL+VG+DFTKSNEWTG SF GR +H + G PYE +AL + V +TL FD+D LIPC+GFGD+ T D FSF ++ PC+G +EA+ARYRSIA L+GPT+FAP+IN A+DIV G YH+LVIIADGQV Sbjct: 36 HYRKIKDDYESVEEVQQALRDAGLESSNLVVGIDFTKSNEWTGKNSFGGRSLHAIG-GDLNPYE---RALSI---VGRTLSSFDEDNLIPCFGFGDATTHDTEAFSFYADHRPCDGFEEALARYRSIAPHIRLAGPTSFAPVINAAVDIVEKTGGQYHVLVIIADGQV 196
BLAST of mRNA_P-wetherbeei_contig10384.1.1 vs. uniprot
Match: A0A7S0QJX8_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QJX8_9CRYP) HSP 1 Score: 185 bits (469), Expect = 2.750e-56 Identity = 96/167 (57.49%), Postives = 122/167 (73.05%), Query Frame = 1 Query: 7 WSAIGDRYQSIGEVVQAMRTAGLESSNLIVGVDFTKSNEWTGGKSFSGRCMHDVSSGVRTPYEASNKALEVLRAVAQTLEPFDDDRLIPCYGFGDSRTSDRAVFSFLPNNAPCNGLDEAVARYRSIARAAELSGPTNFAPLINKAIDIVLANGYTYHILVIIADGQV 507 +S I D Y++I EV Q +R AGLESSNLI+G+DFTKSN WTG SF GRC+HDVS G PY+ +V+ V +TLE FDDD LIP +GFGD+ T+D++ F F P+ PCNGL E ++RY+ IA LSGPTNFAP+I+KAI+ V + +YHILV+IADGQV Sbjct: 31 FSTIRDNYRTIEEVQQGLRDAGLESSNLIIGIDFTKSNTWTGQTSFQGRCLHDVS-GPPNPYQ------QVIGIVGRTLEVFDDDHLIPAFGFGDAFTTDKSCFPFYPDR-PCNGLQEVLSRYQEIAPGINLSGPTNFAPIIDKAIETVTSER-SYHILVLIADGQV 188 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10384.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig10384.1.1 >prot_P-wetherbeei_contig10384.1.1 ID=prot_P-wetherbeei_contig10384.1.1|Name=mRNA_P-wetherbeei_contig10384.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=169bp RHWSAIGDRYQSIGEVVQAMRTAGLESSNLIVGVDFTKSNEWTGGKSFSGback to top mRNA from alignment at P-wetherbeei_contig10384:1211..2124+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig10384.1.1 ID=mRNA_P-wetherbeei_contig10384.1.1|Name=mRNA_P-wetherbeei_contig10384.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=914bp|location=Sequence derived from alignment at P-wetherbeei_contig10384:1211..2124+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig10384:1211..2124+ >mRNA_P-wetherbeei_contig10384.1.1 ID=mRNA_P-wetherbeei_contig10384.1.1|Name=mRNA_P-wetherbeei_contig10384.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=507bp|location=Sequence derived from alignment at P-wetherbeei_contig10384:1211..2124+ (Phaeothamnion wetherbeei SAG_119_79)back to top |