mRNA_P-wetherbeei_contig10371.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig10371.1.1
Unique NamemRNA_P-wetherbeei_contig10371.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig10371.1.1 vs. uniprot
Match: A0A087S8T7_9ARCH (dTDP-6-deoxy-L-hexose 3-O-methyltransferase protein n=1 Tax=Marine Group I thaumarchaeote SCGC AAA799-B03 TaxID=1502289 RepID=A0A087S8T7_9ARCH)

HSP 1 Score: 102 bits (255), Expect = 4.900e-25
Identity = 44/88 (50.00%), Postives = 60/88 (68.18%), Query Frame = 1
Query:    1 PLFLTEYPGTALSLVFFDADLYSSARVVLQGCHDRITKGGVIIFDEWNYPDWPGEGTAVREFMAEHGDHYTMESVPRARQPSLLLRKI 264
            P  + E    + S V+ D DLYSS +V+L   HDR++KGG+I+FDEWN+  + GEG AVREF+ EHGD Y M  +   RQP+++L KI
Sbjct:  157 PKAVKENQALSFSFVYCDTDLYSSTKVILDNVHDRVSKGGLIVFDEWNHEHFHGEGLAVREFLEEHGDKYEMRHIKHTRQPNMVLEKI 244          
BLAST of mRNA_P-wetherbeei_contig10371.1.1 vs. uniprot
Match: A0A3D4MGH2_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A3D4MGH2_9PROT)

HSP 1 Score: 83.6 bits (205), Expect = 2.050e-17
Identity = 35/89 (39.33%), Postives = 55/89 (61.80%), Query Frame = 1
Query:    1 PLFLTEYPGTALSLVFFDADLYSSARVVLQGCHDRITKGGVIIFDEWNYPDWPGEGTAVREFMAEHGDHYTMESVPRARQPSLLLRKIK 267
            P+FL + P    S +++DADLY   +V+L   HD+++ GGV +FDE+   +WPGE  AV EF+A     + +E      +P ++LRK+K
Sbjct:  190 PVFLNKNPDKKFSFLYYDADLYEPCKVMLDMLHDKLSVGGVFVFDEYGLEEWPGETQAVDEFIAASNGRFAVEKPAITARPGMVLRKLK 278          
BLAST of mRNA_P-wetherbeei_contig10371.1.1 vs. uniprot
Match: A0A1Z9WM48_9GAMM (Macrocin-O-methyltransferase n=1 Tax=Oceanospirillales bacterium TMED59 TaxID=1986765 RepID=A0A1Z9WM48_9GAMM)

HSP 1 Score: 79.7 bits (195), Expect = 4.310e-16
Identity = 35/64 (54.69%), Postives = 44/64 (68.75%), Query Frame = 1
Query:    7 FLTEYPGTALSLVFFDADLYSSARVVLQGCHDRITKGGVIIFDEWNYPDWPGEGTAVREFMAEH 198
            FL+E PG   SLV FD DLY   ++ L+    R+T GG+IIFDE+  PDWPGE  AV EF+A+H
Sbjct:  173 FLSENPGIRFSLVHFDMDLYLPTKIALEAIWSRVTPGGIIIFDEYAIPDWPGETEAVDEFIAKH 236          
BLAST of mRNA_P-wetherbeei_contig10371.1.1 vs. uniprot
Match: A0A5J6MCM4_9PROT (Uncharacterized protein n=1 Tax=Hypericibacter terrae TaxID=2602015 RepID=A0A5J6MCM4_9PROT)

HSP 1 Score: 76.6 bits (187), Expect = 6.310e-15
Identity = 32/65 (49.23%), Postives = 43/65 (66.15%), Query Frame = 1
Query:    1 PLFLTEYPGTALSLVFFDADLYSSARVVLQGCHDRITKGGVIIFDEWNYPDWPGEGTAVREFMAE 195
            P F+ E PG   SL+ FD DLY   +  L+    R+++GGV++FDE+  PDWPGE  AV EFMA+
Sbjct:  171 PRFVAENPGVRFSLIHFDCDLYKPTKAGLEAFWPRVSRGGVVMFDEYGIPDWPGETAAVDEFMAD 235          
BLAST of mRNA_P-wetherbeei_contig10371.1.1 vs. uniprot
Match: UPI0012E1E06E (class I SAM-dependent methyltransferase n=1 Tax=Oceanobacillus sp. HTM 045 TaxID=2676312 RepID=UPI0012E1E06E)

HSP 1 Score: 75.5 bits (184), Expect = 1.720e-14
Identity = 33/63 (52.38%), Postives = 42/63 (66.67%), Query Frame = 1
Query:    7 FLTEYPGTALSLVFFDADLYSSARVVLQGCHDRITKGGVIIFDEWNYPDWPGEGTAVREFMAE 195
            F+ E PG   SLV FD DLY+  +  L+    R+T+GGV+IFDE+   DWPGE  AV EFMA+
Sbjct:  173 FVEENPGVRFSLVHFDCDLYAPTKAALEAFWPRVTRGGVVIFDEYGIHDWPGETAAVDEFMAD 235          
BLAST of mRNA_P-wetherbeei_contig10371.1.1 vs. uniprot
Match: A0A1H8Y9H6_9PROT (Macrocin-O-methyltransferase (TylF) n=1 Tax=Rhodospirillales bacterium URHD0017 TaxID=1380357 RepID=A0A1H8Y9H6_9PROT)

HSP 1 Score: 74.3 bits (181), Expect = 4.750e-14
Identity = 32/63 (50.79%), Postives = 41/63 (65.08%), Query Frame = 1
Query:    7 FLTEYPGTALSLVFFDADLYSSARVVLQGCHDRITKGGVIIFDEWNYPDWPGEGTAVREFMAE 195
            F  + PG   SLV  D DLY   R +LQ   D++T+GGV+IFDE+   DWPGE  AV EF+A+
Sbjct:  174 FAHDNPGVRFSLVHLDCDLYKPTRAILQALWDKVTRGGVVIFDEYAIADWPGETAAVDEFLAD 236          
BLAST of mRNA_P-wetherbeei_contig10371.1.1 vs. uniprot
Match: M6HB37_LEPIR (O-methyltransferase, TylF family n=1 Tax=Leptospira interrogans serovar Zanoni str. LT2156 TaxID=1001601 RepID=M6HB37_LEPIR)

HSP 1 Score: 73.2 bits (178), Expect = 4.840e-14
Identity = 30/66 (45.45%), Postives = 44/66 (66.67%), Query Frame = 1
Query:    1 PLFLTEYPGTALSLVFFDADLYSSARVVLQGCHDRITKGGVIIFDEWNYPDWPGEGTAVREFMAEH 198
            P F+ E PG   SL+ FD DLY+  +V L+  +  +++GG+++FDE+   DWPGE  AV EF+ EH
Sbjct:  109 PKFIEENPGVRFSLIHFDCDLYTPTKVALKYLYPLLSRGGIMLFDEYGIHDWPGETKAVDEFLDEH 174          
BLAST of mRNA_P-wetherbeei_contig10371.1.1 vs. uniprot
Match: M6V8G5_9LEPT (Macrocin-O-methyltransferase TylF n=9 Tax=Leptospira TaxID=171 RepID=M6V8G5_9LEPT)

HSP 1 Score: 72.8 bits (177), Expect = 1.670e-13
Identity = 29/66 (43.94%), Postives = 44/66 (66.67%), Query Frame = 1
Query:    1 PLFLTEYPGTALSLVFFDADLYSSARVVLQGCHDRITKGGVIIFDEWNYPDWPGEGTAVREFMAEH 198
            P F+ E PG   SL+ FD DLY+  ++ L+  +  +++GG+++FDE+   DWPGE  AV EF+ EH
Sbjct:  167 PQFIKENPGVRFSLIHFDCDLYTPTKIALKYLYPLLSRGGIMLFDEYGIHDWPGETKAVDEFLDEH 232          
BLAST of mRNA_P-wetherbeei_contig10371.1.1 vs. uniprot
Match: A0A4Q2IWS3_9BURK (Macrocin-O-methyltransferase n=1 Tax=Oxalobacteraceae bacterium CAVE-383 TaxID=2478672 RepID=A0A4Q2IWS3_9BURK)

HSP 1 Score: 72.8 bits (177), Expect = 1.690e-13
Identity = 30/63 (47.62%), Postives = 41/63 (65.08%), Query Frame = 1
Query:    7 FLTEYPGTALSLVFFDADLYSSARVVLQGCHDRITKGGVIIFDEWNYPDWPGEGTAVREFMAE 195
            F  + PG   SL+ FD DLY   +V L+    R+ +GGV++FDE+  P+WPGE  AV EFMA+
Sbjct:  169 FCEQNPGVRFSLIHFDCDLYKPTKVALEHLWPRVARGGVVLFDEYGIPEWPGETKAVDEFMAD 231          
BLAST of mRNA_P-wetherbeei_contig10371.1.1 vs. uniprot
Match: UPI0002983368 (class I SAM-dependent methyltransferase n=1 Tax=Leptospira mayottensis TaxID=1137606 RepID=UPI0002983368)

HSP 1 Score: 71.6 bits (174), Expect = 4.550e-13
Identity = 34/87 (39.08%), Postives = 50/87 (57.47%), Query Frame = 1
Query:    1 PLFLTEYPGTALSLVFFDADLYSSARVVLQGCHDRITKGGVIIFDEWNYPDWPGEGTAVREFMAEHGDHYTMESVPRARQPSLLLRK 261
            P F+ E PG   SL+ FD DLY+  +V L+  +  ++KGGV++FDE+   DWPGE  AV EF+ E  ++  +        P+  L K
Sbjct:  167 PRFIKENPGVRFSLIHFDCDLYAPTKVALEYLYPLLSKGGVMLFDEYGIHDWPGETKAVDEFL-ERNENLKLHKFSWTNAPAAYLIK 252          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10371.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A087S8T7_9ARCH4.900e-2550.00dTDP-6-deoxy-L-hexose 3-O-methyltransferase protei... [more]
A0A3D4MGH2_9PROT2.050e-1739.33Uncharacterized protein n=1 Tax=Rhodospirillaceae ... [more]
A0A1Z9WM48_9GAMM4.310e-1654.69Macrocin-O-methyltransferase n=1 Tax=Oceanospirill... [more]
A0A5J6MCM4_9PROT6.310e-1549.23Uncharacterized protein n=1 Tax=Hypericibacter ter... [more]
UPI0012E1E06E1.720e-1452.38class I SAM-dependent methyltransferase n=1 Tax=Oc... [more]
A0A1H8Y9H6_9PROT4.750e-1450.79Macrocin-O-methyltransferase (TylF) n=1 Tax=Rhodos... [more]
M6HB37_LEPIR4.840e-1445.45O-methyltransferase, TylF family n=1 Tax=Leptospir... [more]
M6V8G5_9LEPT1.670e-1343.94Macrocin-O-methyltransferase TylF n=9 Tax=Leptospi... [more]
A0A4Q2IWS3_9BURK1.690e-1347.62Macrocin-O-methyltransferase n=1 Tax=Oxalobacterac... [more]
UPI00029833684.550e-1339.08class I SAM-dependent methyltransferase n=1 Tax=Le... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10371contigP-wetherbeei_contig10371:1..270 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog457425.XNR_0574
PFAMsMethyltransf_24,TylF
Model size270
Max annot lvl201174|Actinobacteria
KEGG rclassRC00003,RC00466
KEGG koko:K19856,ko:K21325
KEGG ReactionR11041,R11469
KEGG Pathwayko00523,ko01130,map00523,map01130
KEGG ModuleM00799
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.5e-14
EggNOG OGsCOG4122@1|root,COG4122@2|Bacteria,2IA2G@201174|Actinobacteria
DescriptionMacrocin-O-methyltransferase (TylF)
Cds size270
COG categoryS
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185865.9884288-CDS-P-wetherbeei_contig10371:0..2701683185865.9884288-CDS-P-wetherbeei_contig10371:0..270Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10371 1..270 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10371.1.1prot_P-wetherbeei_contig10371.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig10371 1..270 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig10371.1.1

>prot_P-wetherbeei_contig10371.1.1 ID=prot_P-wetherbeei_contig10371.1.1|Name=mRNA_P-wetherbeei_contig10371.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=90bp
PLFLTEYPGTALSLVFFDADLYSSARVVLQGCHDRITKGGVIIFDEWNYP
DWPGEGTAVREFMAEHGDHYTMESVPRARQPSLLLRKIK*
back to top

mRNA from alignment at P-wetherbeei_contig10371:1..270+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig10371.1.1 ID=mRNA_P-wetherbeei_contig10371.1.1|Name=mRNA_P-wetherbeei_contig10371.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=270bp|location=Sequence derived from alignment at P-wetherbeei_contig10371:1..270+ (Phaeothamnion wetherbeei SAG_119_79)
CCGCTCTTTTTAACTGAATACCCCGGAACCGCGCTGTCGCTCGTTTTTTT TGACGCCGACCTCTACAGTTCTGCGCGCGTAGTTCTCCAAGGGTGCCATG ATCGGATCACAAAGGGTGGCGTGATCATTTTCGATGAATGGAATTATCCA GACTGGCCCGGAGAAGGAACGGCCGTCCGCGAATTCATGGCGGAACATGG CGACCACTATACGATGGAAAGCGTGCCCAGAGCACGTCAGCCTTCGTTGC TCCTGCGAAAGATAAAGTAA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig10371:1..270+

>mRNA_P-wetherbeei_contig10371.1.1 ID=mRNA_P-wetherbeei_contig10371.1.1|Name=mRNA_P-wetherbeei_contig10371.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=270bp|location=Sequence derived from alignment at P-wetherbeei_contig10371:1..270+ (Phaeothamnion wetherbeei SAG_119_79)
CCGCTCTTTTTAACTGAATACCCCGGAACCGCGCTGTCGCTCGTTTTTTT
TGACGCCGACCTCTACAGTTCTGCGCGCGTAGTTCTCCAAGGGTGCCATG
ATCGGATCACAAAGGGTGGCGTGATCATTTTCGATGAATGGAATTATCCA
GACTGGCCCGGAGAAGGAACGGCCGTCCGCGAATTCATGGCGGAACATGG
CGACCACTATACGATGGAAAGCGTGCCCAGAGCACGTCAGCCTTCGTTGC
TCCTGCGAAAGATAAAGTAA
back to top