mRNA_P-wetherbeei_contig1037.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1037.3.1 vs. uniprot
Match: A0A6H5JJB7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJB7_9PHAE) HSP 1 Score: 181 bits (459), Expect = 9.530e-52 Identity = 102/191 (53.40%), Postives = 135/191 (70.68%), Query Frame = 1 Query: 280 RLRNSSSLFRSVSWVAWWAQVITSTVSAVILLFSNSITDRQARASFLSNGVLLAGAGLTLSAVSIFWTYGYIVRARRWSSRRLQLPQQPDKLPEIRRQTIR---SLRVGVYINLLGMLVTLLGAEQIVGTLVAK-----GFQPFSGPVVAGSVGAAQLSASQFRALDIFIVQANTNTLLSHFAGLCNALFL 828 +L+ S+++FR VSW++WWAQ I STV+ +ILLFSN++T+R AR + L NGV LA A L SA SI WT+GY ++A+ W + L E+ +R SLR+G+YIN+ GML+ L+GAEQIVGTLVAK GFQP V+ GS GAA+++ +QFRALD+FIVQANTNTLLSHF L +L+L Sbjct: 133 QLKRSTTVFRQVSWLSWWAQTILSTVAFIILLFSNAVTNRSARGNILGNGVALAVASLACSAASICWTWGYNLKAKGW--------RNLGTLAEVDDAQVRMRGSLRMGLYINVAGMLLALVGAEQIVGTLVAKVLYAQGFQP---SVMVGSAGAAEVAQAQFRALDVFIVQANTNTLLSHFCSLAASLWL 312
BLAST of mRNA_P-wetherbeei_contig1037.3.1 vs. uniprot
Match: A0A836CL61_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL61_9STRA) HSP 1 Score: 169 bits (427), Expect = 2.280e-47 Identity = 96/188 (51.06%), Postives = 126/188 (67.02%), Query Frame = 1 Query: 280 RLRNSSSLFRSVSWVAWWAQVITSTVSAVILLFSNSITDRQARASFLSNGVLLAGAGLTLSAVSIFWTYGYIVRARRWSSRRLQLPQQPDKLPEIRRQTIRSLRVGVYINLLGMLVTLLGAEQIVGTLVAKGFQPFSGPVVAGSVGAAQLSASQ-FRALDIFIVQANTNTLLSHFAGLCNALFLRGKA 840 RL+ +S F+ + W +WW+Q I STVSA+I+LFSN+IT+R R + L NGV LAG + + S+FWT+ I++A W R + P E +R IR+L+VGV+INLLG L L+GAEQIVGTLVAK +SG + G V A+ + A+Q FRALDIFI+QANTNTLLSHF L L L +A Sbjct: 96 RLKLGASNFQRLGWFSWWSQTILSTVSAIIILFSNAITERSVRGNALGNGVFLAGLAVASAGASMFWTWTLILKATAWVGRNEKKRSTPT---EAQRNIIRALKVGVWINLLGALFALVGAEQIVGTLVAKVL--YSGGITQGQVVASSIPATQQFRALDIFIIQANTNTLLSHFVSLAINLLLLARA 278
BLAST of mRNA_P-wetherbeei_contig1037.3.1 vs. uniprot
Match: A0A7S3XU47_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XU47_HETAK) HSP 1 Score: 155 bits (393), Expect = 6.600e-42 Identity = 90/194 (46.39%), Postives = 118/194 (60.82%), Query Frame = 1 Query: 280 RLRNSSSLFRSVSWVAWWAQVITSTVSAVILLFSNSITDRQARASFLSNGVLLAGAGLTLSAVSIFWTYGYIVRARRWSSRRLQLPQQPDKLPEIRRQTIRSLRVGVYINLLGMLVTLLGAEQIVGTLVAK-----GFQPFSGPVVAGSVGAAQLSASQ--FRALDIFIVQANTNTLLSHFAGLCNALFLRGKA 840 R+RN S+ F++ +W +WWAQVI STV+ VIL F+++ITD R + NG LLAG G+ VS FWT+GY A+RW + L +++R +R L G ++N LGM V L GAEQIVGTLVAK G PF G G L Q +ALDIF+VQANTN+++SH GL L+LRG+A Sbjct: 97 RIRNLSNGFQNAAWTSWWAQVILSTVAGVILFFASAITDP--RVNMFMNGTLLAGCGVFFGLVSTFWTWGYASAAKRWK-------RPGADLEKLQRAMLRRLEFGHFVNTLGMAVALTGAEQIVGTLVAKVLSAQGLSPFLGGAAVGYAAGQPLVLPQGAVQALDIFVVQANTNSVVSHLCGLLTVLYLRGRA 281
BLAST of mRNA_P-wetherbeei_contig1037.3.1 vs. uniprot
Match: A0A7S2V450_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V450_9STRA) HSP 1 Score: 149 bits (375), Expect = 7.990e-40 Identity = 88/191 (46.07%), Postives = 117/191 (61.26%), Query Frame = 1 Query: 280 RLRNSSSLFRSVSWVAWWAQVITSTVSAVILLFSNSITDRQARASFLSNGVLLAGAGLTLSAVSIFWTYGYIVRARRWSSRRLQLPQQPDKLPEIRRQTIRSLRVGVYINLLGMLVTLLGAEQIVGTLVAKGFQP-------FSGPVVAGSVGAAQLSASQFRALDIFIVQANTNTLLSHFAGLCNALFLR 831 R+ S+ F+ ++W++WW QVI +TV+ VIL F+ ++TD RA+FL NG LAG G+TL +SIFWT+G ARRW R L Q + L+ V INL+GMLV L+GAEQIVGTLVAK Q S + AG G F+ALDIF+VQANTNT+L+HF+ L +L+L+ Sbjct: 80 RIWKLSNYFQRIAWISWWTQVILTTVAGVILFFTTAVTD-PGRANFLVNGTFLAGCGVTLGLISIFWTWGIARAARRWKRRSTDLDQACASMGN-------RLKAAVLINLMGMLVALVGAEQIVGTLVAKILQTQTVQQFGMSQVIQAGGSGI-------FQALDIFVVQANTNTILAHFSSLAASLWLQ 255
BLAST of mRNA_P-wetherbeei_contig1037.3.1 vs. uniprot
Match: L1JCY2_GUITC (Translocon at the inner envelope membrane of chloroplast 21 like protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JCY2_GUITC) HSP 1 Score: 132 bits (333), Expect = 1.520e-34 Identity = 81/192 (42.19%), Postives = 114/192 (59.38%), Query Frame = 1 Query: 307 RSVSWVAWWAQVITSTVSAVILLFSNSITDRQARASFLSNGVLLAGAGLTLSAVSIFWTYGYIVRARRWSSRRLQLPQQPDKLPEIRRQTIRSLRVGVYINLLGMLVTLLGAEQIVGTLVAKGFQPF----SGPVVAGSVGAAQLSASQF--------------RALDIFIVQANTNTLLSHFAGLCNALFL 828 R SW++WWAQVI S +SA+ L F+N++ + + L+NGV +AG GL LS +++ WT GY +R ++++L+ P+ R R++RVGV + L GM +TLLGAEQIVGTLVAK +G +A + QL F +ALDIF+VQANTNTLLSH + L N+LF+ Sbjct: 2 RQSSWLSWWAQVILSVISAITLFFANAVRGPM-QGNILANGVFMAGLGLALSFINVIWTTGY----QRIAAKQLETPEAAMSF----RSFSRTVRVGVIVALTGMFLTLLGAEQIVGTLVAKSISGSILIANGGGIAAQTASLQLQVCSFIDPRQLGFRTECCWQALDIFVVQANTNTLLSHLSSLVNSLFI 184
BLAST of mRNA_P-wetherbeei_contig1037.3.1 vs. uniprot
Match: A0A7S1XJJ2_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XJJ2_9STRA) HSP 1 Score: 127 bits (318), Expect = 5.950e-32 Identity = 79/190 (41.58%), Postives = 114/190 (60.00%), Query Frame = 1 Query: 280 RLRNSSSLFRSVSWVAWWAQVITSTVSAVILLFSNSITDRQARASFLSNG----VLLAGAGLTLSAVSIFWTYGYIVRARRWSSRRLQLPQQPDKLPEIRRQTIR-SLRVGVYINLLGMLVTLLGAEQIVGTLVAK--GFQPFSGPVVAGSVGAAQLSASQFRALDIFIVQANTNTLLSHFAGLCNALFL 828 RL + L+R+ W +WW Q + + ++++ LLF+ + ++ + +G + LAG G++LSA+S+FWT+G+ ARR L + D P + + IR +LR G+ +NL+GM TL GAEQIVGTLVAK FQ +GP + GA + +ALDIFIVQANTNTLLSH L L+L Sbjct: 19 RLETAKKLWRA-GWTSWWIQTVLTVIASITLLFARTFAAAAGGSTAIQSGGAGGLFLAGLGVSLSALSVFWTWGFTRVARR-------LRKGEDLTPRLEARLIRRALRTGIVLNLVGMFATLFGAEQIVGTLVAKVLSFQGVTGP----AAGAYVAPTATLQALDIFIVQANTNTLLSHLCSLTITLWL 196
BLAST of mRNA_P-wetherbeei_contig1037.3.1 vs. uniprot
Match: A0A4D9D048_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D048_9STRA) HSP 1 Score: 127 bits (320), Expect = 1.540e-31 Identity = 81/194 (41.75%), Postives = 112/194 (57.73%), Query Frame = 1 Query: 271 IRTRLRNSSSLFRSVSWVAWWAQVITSTVSAVILLFSNSITDRQ------ARASFLSNGVLLAGAGLTLSAVSIFWTYGYIVRARRWSSRRLQLPQQPDKLPEIRRQTIRSLRVGVYINLLGMLVTLLGAEQIVGTLVAKGF--QPFSGPVVAGSVGAAQLSASQFRALDIFIVQANTNTLLSHFAGLCNALFL 828 ++ LR S S +W +WWAQVI +TV+ VIL F+NS A S SNG + A +GL L A+SIFWT+G+ A+R RR L + P L +R R +R + INLLG+L L+GAEQ VG L+A+ Q FS V+ S +++ + +DIF++QANTN LLSHF L ++L L Sbjct: 90 LKIELRQYSKFLHSTAWFSWWAQVICNTVAGVILFFTNSFVAPSGGGPSLAAKSIFSNGYIFAASGLCLGAISIFWTWGFTGVAKR--IRRAVL-EPPTSLAMVR----RVVRTAIVINLLGLLTALIGAEQFVGNLMARVLSQQGFSPLVINQSAMGGAIASPTVQPVDIFVIQANTNILLSHFISLVSSLLL 276
BLAST of mRNA_P-wetherbeei_contig1037.3.1 vs. uniprot
Match: B7G9W6_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G9W6_PHATC) HSP 1 Score: 127 bits (318), Expect = 1.940e-30 Identity = 80/185 (43.24%), Postives = 114/185 (61.62%), Query Frame = 1 Query: 283 LRNSSSLFRSVSWVAWWAQVITSTVSAVILLFSNSITDRQARASFLSNGVLLAGAGLTLSAVSIFWTYGYIVRARRWSSRRLQLPQQPDKLPEIRRQTIRSLRVGVYINLLGMLVTLLGAEQIVGTLVAKGFQPFSGPVVAGSVGAAQLSASQFRALDIFIVQANTNTLLSHFAGLCNALFLRGK 837 ++ +S + + VSW +WW+Q+I +TVSAVIL FS S+ R A + + LL+GAG+ +SA SI WT+G R S R L+ P + ++ R R++RVGV +NL+G+LVTLL AE+IVG L K + A +G+ + Q + LDI +VQANTNTLLSHF L + L+L K Sbjct: 194 VKETSLVLKRVSWFSWWSQIILTTVSAVILSFSRSVVGRNATVGPVPS-FLLSGAGVLISACSIIWTWG---NGARLSRRLLRRPTTRSQAADMFR---RAVRVGVTLNLIGLLVTLLAAEEIVGALAIKVLTNRNFGPQAALLGSVE---GQLQPLDILVVQANTNTLLSHFCSLVSLLYLSDK 368
BLAST of mRNA_P-wetherbeei_contig1037.3.1 vs. uniprot
Match: A0A0M0JU81_9EUKA (Copper uptake transmembrane transporter n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JU81_9EUKA) HSP 1 Score: 122 bits (305), Expect = 2.130e-30 Identity = 73/176 (41.48%), Postives = 97/176 (55.11%), Query Frame = 1 Query: 313 VSWVAWWAQVITSTVSAVILLFSNSITDRQARASFLSNGVLLAGAGLTLSAVSIFWTYGYIVRARRWSSRRLQLPQQPDKLPEIRRQTIRSLRVGVYINLLGMLVTLLGAEQIVGTLVAKGFQPFSGPVVAGSVGAAQLSASQFRALDIFIVQANTNTLLSHFAGLCNALFLRGKA 840 + WV+WW+Q I ST+SAV+LLF+N++T R + L + L G L + S WT Y ARR P + + VG ++N++GM++ LLGAE IVGTL AK Q SG + GS S +ALD+ IVQANTNTLL+HF LC + LRG A Sbjct: 20 IGWVSWWSQAILSTISAVLLLFANTVTVRPTALTILGRALTLGG--LVAAIASTLWTVAYGRLARRLGR------ATPPTAEDAAERAANIATVGTWLNIVGMVLCLLGAEAIVGTLAAKALQSTSGTAITGS-----FIPSPVQALDLLIVQANTNTLLAHFISLCANMRLRGAA 182
BLAST of mRNA_P-wetherbeei_contig1037.3.1 vs. uniprot
Match: A0A7J7II36_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7II36_9RHOD) HSP 1 Score: 124 bits (311), Expect = 2.920e-30 Identity = 82/191 (42.93%), Postives = 115/191 (60.21%), Query Frame = 1 Query: 286 RNSSSLFRSVSWVAWWAQVITSTVSAVILLFSNSITDRQ-----ARASFLSNGVLLAGAGLTLSAVSIFWTYGYIVRARRWSSRRLQLPQQPDKLPEIRRQTI-RSLRVGVYINLLGMLVTLLGAEQIVGTLVAKGF-QPFSGPV---VAGSVGAAQLSASQFRALDIFIVQANTNTLLSHFAGLCNALFL 828 R S++L+R + AWWAQ++ S V+ I LF+ +I A + S G+L AG GL + +S+FW YGYI ARR L + +R + + R+LRVGV+IN+LGM +TL+GA+ I G L+AK Q +GP+ GS+ A + +ALDIF+VQANTN LLSHF GLC AL++ Sbjct: 92 RLSAALYR-LGAAAWWAQLLLSIVAGGITLFAVAILHGSRGVSGATTTAASTGLLFAGIGLVFAFLSVFWAYGYIRLARR-------LMRAQKMGYGVRSENVFRTLRVGVFINILGMALTLIGAQSISGVLLAKALSQGVAGPLPFYATGSIQAGGGTVGYVQALDIFVVQANTNALLSHFVGLCTALWM 274 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1037.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1037.3.1 >prot_P-wetherbeei_contig1037.3.1 ID=prot_P-wetherbeei_contig1037.3.1|Name=mRNA_P-wetherbeei_contig1037.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=280bp LLPNCEAFSIGLSRHRGAVAWRHGAHPSTFYRPALSTIPPRPRPRTTLIAback to top mRNA from alignment at P-wetherbeei_contig1037:5148..6700+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1037.3.1 ID=mRNA_P-wetherbeei_contig1037.3.1|Name=mRNA_P-wetherbeei_contig1037.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1553bp|location=Sequence derived from alignment at P-wetherbeei_contig1037:5148..6700+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1037:5148..6700+ >mRNA_P-wetherbeei_contig1037.3.1 ID=mRNA_P-wetherbeei_contig1037.3.1|Name=mRNA_P-wetherbeei_contig1037.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=840bp|location=Sequence derived from alignment at P-wetherbeei_contig1037:5148..6700+ (Phaeothamnion wetherbeei SAG_119_79)back to top |