mRNA_P-wetherbeei_contig10354.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig10354.1.1 vs. uniprot
Match: D7FRQ9_ECTSI (Dynein light intermediate chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRQ9_ECTSI) HSP 1 Score: 110 bits (276), Expect = 2.720e-25 Identity = 52/106 (49.06%), Postives = 74/106 (69.81%), Query Frame = 1 Query: 193 AGDSYHPLLSFAHFAAVDPFEPDNEREDMPARVSVWGCSETEFEPLLQTVLKPERLPHTAVLLALDLSKPWTLMRELEQWAAAVSSRIAALTKQLPAEARAALQEA 510 AG ++HP+LS+A+ A DP E ER++ P RVSVW CS EFEPLL+TVL+PE LP+ AV++A+DLS+PW +M +E+W A+ + +L QL A+ L+ A Sbjct: 130 AGQAFHPVLSYAYLDAADPAEQGAERDESPPRVSVWSCSGLEFEPLLETVLRPEELPNMAVVVAVDLSRPWEVMDSVEKWTTAMEKHVTSLLLQLSVGAQDDLRSA 235
BLAST of mRNA_P-wetherbeei_contig10354.1.1 vs. uniprot
Match: A0A3M6VKG5_9STRA (Dynein light intermediate chain n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VKG5_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 6.050e-21 Identity = 57/165 (34.55%), Postives = 85/165 (51.52%), Query Frame = 1 Query: 4 SLWGALLKDAMRRNRTPDSTVLLVGPADCGKSALIRRFQGSPFAAEGSGQLVNSTALADGTTGAGDSYHPLLSFAHFAAVDPFEPDNE--REDMPARVSVWGCSETEFEPLLQTVLKPERLPHTAVLLALDLSKPWTLMRELEQWAAAVSSRIAALTKQLPAEAR 492 +LW +L+D R++ P +LLVG A+CGKSAL+ R A G Q N T D +L+F +DP E R+D+ A + W ++ E L++ +KP+ L T V + LDLS+PWT+ LEQW +A+ ++ QLP+E R Sbjct: 6 NLWQQMLRDCSVRSKLPVVNLLLVGDAECGKSALLSRLD---EAKRGPSQTTNETHTVD----------TILAFKTLDVLDPHVKRAEMMRQDVMAHICTWSLNDLTLEDLIKIAIKPQTLQTTVVAIVLDLSRPWTIKSSLEQWLSALEGQLLEQINQLPSEER 157
BLAST of mRNA_P-wetherbeei_contig10354.1.1 vs. uniprot
Match: A0A067C6I1_SAPPC (Dynein light intermediate chain n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C6I1_SAPPC) HSP 1 Score: 67.0 bits (162), Expect = 6.800e-10 Identity = 50/157 (31.85%), Postives = 80/157 (50.96%), Query Frame = 1 Query: 4 SLWGALLKDAMRRNRTPDSTVLLVGPADCGKSALIRRFQGSPFAAEGSGQLVNSTALADGTTGAGDSYHPLL--SFAHFAAVDPFEPDNEREDMPA-RVSVWGCS--ETEFEP-LLQTVLKPERLPHTAVLLALDLSKPWTLMRELEQWAAAVSSRI 456 +LW +LL+++ R P + +LL+GPA+ GKS++++R+Q L N + TT H +L FA F ED PA +++VW + + E EP LL + +RL HT L+ LD S+PWT+ L+ W A+ + + Sbjct: 5 NLWQSLLRESSERAPIPSTELLLLGPAESGKSSMLQRWQ----------HLGNKSPAEKPTT-----VHTVLPSEFATFHLPS--------EDDPACQLNVWSFNTDQLETEPALLGLAIDVDRLQHTIALVVLDASRPWTIKPTLDTWLPALENAL 138
BLAST of mRNA_P-wetherbeei_contig10354.1.1 vs. uniprot
Match: A0A1V9Z8Q0_9STRA (Dynein light intermediate chain n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z8Q0_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 1.710e-9 Identity = 50/156 (32.05%), Postives = 79/156 (50.64%), Query Frame = 1 Query: 1 ASLWGALLKDAMRRNRTPDSTVLLVGPADCGKSALIRRFQGSPFAAEGSGQLVNSTALADGTTGAGDSYHPLLSFAHFAAVDPFEPDNEREDMPARVSVWGCS----ETEFEPLLQTVLKPERLPHTAVLLALDLSKPWTLMRELEQWAAAVSSRI 456 A LW +LL+++ R S VLL+GPA+ GKSAL+ R+Q + N + G HP+L + FA F +E ED ++++W + ETE LL + ERL T L+ +D S+PWT+ + L++W A+ + + Sbjct: 2 AKLWESLLRESSARAPLASSDVLLLGPAESGKSALLHRWQ----------HMGNKSPNERGLG------HPVLP-SEFAT---FHLPSE-EDPSCQMNIWSFNTDLLETEMA-LLSLAIDIERLKQTIALIIVDGSRPWTIQQTLDKWLPALDTAV 135
BLAST of mRNA_P-wetherbeei_contig10354.1.1 vs. uniprot
Match: A0A7S2TFR1_9EUKA (Dynein light intermediate chain n=2 Tax=Lotharella TaxID=74819 RepID=A0A7S2TFR1_9EUKA) HSP 1 Score: 64.3 bits (155), Expect = 5.870e-9 Identity = 44/166 (26.51%), Postives = 80/166 (48.19%), Query Frame = 1 Query: 10 WGALLKDAMRRNRTPDSTVLLVGPADCGKSALIRRFQGSPFAAEGSGQLVNSTALADGTTGAGDSYHPLLS-FAHFAAVDPFEPDNEREDMPARVSVWGCSETEFEPLLQTVLKPERLPHTAVLLALDLSKPWTLMRELEQWAAAVSSRIAALTKQLPAEARAALQ 504 W ALL+ A++R DST++++G +CGKS+L++ F G +V + HP ++ +++ + E D++ + A ++VW + + L+ T LK L ++ LDLS+PW++ L+ W A L K++ E AL+ Sbjct: 12 WEALLRRAIQRRVYTDSTLIVLGDTNCGKSSLLKSFPG----------IVRNQE------------HPYVADYSYIKVKNRHEVDSD--ETLAHMAVWQLDKPSRKELIPTFLKSSGLERAVFMIVLDLSQPWSIDESLKTWLQAAEDISKQLMKEMEDEESKALK 153
BLAST of mRNA_P-wetherbeei_contig10354.1.1 vs. uniprot
Match: A0A7S0H3U2_9EUKA (Dynein light intermediate chain n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0H3U2_9EUKA) HSP 1 Score: 60.5 bits (145), Expect = 1.280e-7 Identity = 40/157 (25.48%), Postives = 74/157 (47.13%), Query Frame = 1 Query: 10 WGALLKDAMRRNRTPDSTVLLVGPADCGKSALIRRFQGSPFAAEGSGQLVNSTALADGTTGAGDSYHPLLS-FAHFAAVDPFEPDNEREDMPARVSVWGCSETEFEPLLQTVLKPERLPHTAVLLALDLSKPWTLMRELEQWAAAVSSRIAALTKQL 477 W LLK A +R DST++++G +CGKS+L++ F+G +V + HP ++ +++ + E D++ + A +++W + + L+ T LK L ++ LDLS+PW++ L+ W + L K L Sbjct: 28 WETLLKRATQRTVYEDSTLIVLGNTNCGKSSLLKSFRG----------IVRNPD------------HPYVAAYSYIHVKNRHEADSD--ETLAHMAIWQLDKPSRKGLIPTFLKSSGLERAMFMIVLDLSQPWSMEDSLKTWIEVAENACKELMKDL 160
BLAST of mRNA_P-wetherbeei_contig10354.1.1 vs. uniprot
Match: A0A5C3NGM7_9AGAM (Uncharacterized protein n=1 Tax=Heliocybe sulcata TaxID=5364 RepID=A0A5C3NGM7_9AGAM) HSP 1 Score: 60.5 bits (145), Expect = 1.360e-7 Identity = 48/145 (33.10%), Postives = 64/145 (44.14%), Query Frame = 1 Query: 7 LWGALLKDAMRRNRTPDSTVLLVGPADCGKSALIRRFQGSPFAAEGSGQLVNSTALADGTTGAGDSYHPLLSFAHFAAVDPFEPDNEREDMPARVSVWGC--SETEFEPLLQTVLKPER-LPHTAVLLALDLSKPWTLMRELEQW 432 LW ++L P VLL+G GKSAL P AE S + + S L + +A V D ED AR+SV+ + T + LL L P +PHT V++ALD +KPWT + ELE W Sbjct: 16 LWSSILDSVSSTRSIPSKQVLLLGQPSSGKSALAAALLQKPVEAEDSKEELRSDFA--------------LGY-DWADVR----DEADEDTLARLSVYTVPSAATSYTALLPHFLPPRASVPHTVVMIALDWTKPWTFVEELETW 141
BLAST of mRNA_P-wetherbeei_contig10354.1.1 vs. uniprot
Match: A0A094GKH5_9PEZI (Uncharacterized protein n=21 Tax=Pseudogymnoascus TaxID=78156 RepID=A0A094GKH5_9PEZI) HSP 1 Score: 58.9 bits (141), Expect = 4.500e-7 Identity = 34/144 (23.61%), Postives = 65/144 (45.14%), Query Frame = 1 Query: 7 LWGALLKDAMRRNRTPDSTVLLVGPADCGKSALIRRFQGSPFAAEGSGQLVNSTALADGTTGAGDSYHPLLSFAHFAAVDPFEPDNEREDMPARVSVWGCSETE--FEPLLQTVLKPERLPHTAVLLALDLSKPWTLMRELEQW 432 +W ++L R P+ V ++G + + + G+ N G +YH +L D + ED AR+S++ +++ F PLL+++L PE +P+T +++ LD S+PW +++L W Sbjct: 26 MWSSMLDSVASGKRLPERNVFVLGGSSDSQKEFLEALSSESSTKRSQGRHGNRKPPVANDFALGYTYHDVL-------------DADHEDTIARLSLYLLADSSPTFTPLLRSLLTPESIPNTLIVVLLDWSEPWLWLQQLRDW 156
BLAST of mRNA_P-wetherbeei_contig10354.1.1 vs. uniprot
Match: A0A2A9NNB3_9AGAR (Uncharacterized protein n=1 Tax=Amanita thiersii Skay4041 TaxID=703135 RepID=A0A2A9NNB3_9AGAR) HSP 1 Score: 58.9 bits (141), Expect = 4.600e-7 Identity = 46/145 (31.72%), Postives = 61/145 (42.07%), Query Frame = 1 Query: 7 LWGALLKDAMRRNRTPDSTVLLVGPADCGKSALIRRFQGSPFAAEGSGQLVNSTALADGTTGAGDSYHPLLSFAHFAAVDPFEPDNEREDMPARVSVWGC--SETEFEPLLQTVLKPER-LPHTAVLLALDLSKPWTLMRELEQW 432 LW ++L P VLL+G GKSA+ P A + + A+ FA V D+ ED AR+SV+ S + LL L P LPHT V++ALD ++PWT M ELE W Sbjct: 16 LWSSILDSVSSTRSIPSKQVLLLGQPSTGKSAIAAALLQKPVADQNKEDERSDFAIG----------------YDFADVR----DDGDEDTLARLSVYTIPSSSNSYTSLLPHFLPPRTSLPHTLVIIALDWTRPWTFMEELETW 140
BLAST of mRNA_P-wetherbeei_contig10354.1.1 vs. uniprot
Match: S7QIN1_GLOTA (Uncharacterized protein n=1 Tax=Gloeophyllum trabeum (strain ATCC 11539 / FP-39264 / Madison 617) TaxID=670483 RepID=S7QIN1_GLOTA) HSP 1 Score: 57.0 bits (136), Expect = 2.120e-6 Identity = 49/147 (33.33%), Postives = 66/147 (44.90%), Query Frame = 1 Query: 7 LWGALLKDAMRRNRTPDSTVLLVGPADCGKSALIRRF-QGSPFAAEGSGQLVNSTALADGTTGAGDSYHPLLSFAHFAAVDPFEPDNEREDMPARVSVWGC--SETEFEPLLQTVLKPER--LPHTAVLLALDLSKPWTLMRELEQW 432 LW ++L P VLL+G GKS L Q S A +G +L + AL G + + D+ ED AR+SV+ + T + LL L P R LPHT V++ALD +KPWT + ELE W Sbjct: 16 LWSSILDSVSSTRAIPSKQVLLLGQPSSGKSTLASALLQKSVEAEDGKEELRSDFAL-------GYDWADIR-------------DDADEDTLARLSVYTVPSAATSYTALLPHFL-PSRTSLPHTLVMIALDWTKPWTFVEELETW 141 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10354.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig10354.1.1 >prot_P-wetherbeei_contig10354.1.1 ID=prot_P-wetherbeei_contig10354.1.1|Name=mRNA_P-wetherbeei_contig10354.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=170bp ASLWGALLKDAMRRNRTPDSTVLLVGPADCGKSALIRRFQGSPFAAEGSGback to top mRNA from alignment at P-wetherbeei_contig10354:1146..1930+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig10354.1.1 ID=mRNA_P-wetherbeei_contig10354.1.1|Name=mRNA_P-wetherbeei_contig10354.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=785bp|location=Sequence derived from alignment at P-wetherbeei_contig10354:1146..1930+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig10354:1146..1930+ >mRNA_P-wetherbeei_contig10354.1.1 ID=mRNA_P-wetherbeei_contig10354.1.1|Name=mRNA_P-wetherbeei_contig10354.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=510bp|location=Sequence derived from alignment at P-wetherbeei_contig10354:1146..1930+ (Phaeothamnion wetherbeei SAG_119_79)back to top |